mRNA_E-siliculosus-1a_F_contig1599.3435.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A6H5L7S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S2_9PHAE) HSP 1 Score: 434 bits (1115), Expect = 1.350e-151 Identity = 220/242 (90.91%), Postives = 225/242 (92.98%), Query Frame = 1
Query: 31 MACEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKTAV 756
MACEARIIRALRTMEYPGLDH+SGS ATGRSLVAQPHELAKIVGWIEDRK+RGL ISDREPLRTPGPKW E+FFSYLQEMGCP+DFKATGGGGGEPS AAVLRGVSWLVTEAVA DFEDNGKEYKAAAREL LA R S Q MGGARGGSSSD SVQPEPAQQTISTAGDAMD G G EHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQ+EVNGVI LAQSTRREQKTAV
Sbjct: 1 MACEARIIRALRTMEYPGLDHISGSAATGRSLVAQPHELAKIVGWIEDRKIRGLTISDREPLRTPGPKWEEAFFSYLQEMGCPNDFKATGGGGGEPSGAAVLRGVSWLVTEAVAYDFEDNGKEYKAAARELLLAKTRFSPQAMGGARGGSSSDPSSVQPEPAQQTISTAGDAMDIGSGEEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQNEVNGVIDLAQSTRREQKTAV 242
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: D7G3K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K0_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 4.280e-147 Identity = 213/229 (93.01%), Postives = 218/229 (95.20%), Query Frame = 1
Query: 70 MEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKTAV 756
MEYPGLDHVSGS A+GRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKW E FSYLQEMGCP+DFKATGGGGGEPSSAAVLRGVSWLVTEAVACDF+DNGKEYKAAAREL LANPRCS Q +GGARGGSSSDHGSVQPEPAQ TISTAG AMD GPGGEHR FREQLRGFTAGVETGDEACDSVATVLRMLYLSDLR+LQDEVNGVIALAQSTRREQKTAV
Sbjct: 1 MEYPGLDHVSGSAASGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWEEVLFSYLQEMGCPNDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFDDNGKEYKAAAREL-LANPRCSPQAVGGARGGSSSDHGSVQPEPAQPTISTAGVAMDIGPGGEHRIFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRNLQDEVNGVIALAQSTRREQKTAV 228
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A7S1C4J5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4J5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.930e-20 Identity = 81/266 (30.45%), Postives = 118/266 (44.36%), Query Frame = 1
Query: 31 MACEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYL--QEMGCPD-DFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGG-----SSSDHGSVQPEPAQQTISTAGDAMDT------------------GPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
MA EA R LR + YP + +E+ +V ++EDRKVR L + R PLRT GP W ++F SY+ + CP A GGE A + V WL+ A+ ++ED + AAA + +A+ S G + GG +++ ++ P A + G A GG RT + G + G+ TGD A D V R+LY+SDLR LQD VN ++ Q+ + KT
Sbjct: 1 MAEEASTRRRLRALAYPRWREFR---------LDDDNEVVLLVAFLEDRKVRALPMEARAPLRTAGPGWHDAFLSYVGGDPLNCPLLSAAAIEAAGGEVDRATLGACVMWLIGHAIGVEYEDVAEAANAAA--VRVASDSGSAPASGASGGGEEGADAAAVRAALTPIAALLGVRVDGRAPAELTEAVRRAVQRKVVPAVEAAGGAGRTLPLTMDGISGGLLTGDAALDRAIAVARLLYVSDLRQLQDSVNELLVSVQAYTADPKT 255
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A7S3Y2A7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2A7_HETAK) HSP 1 Score: 98.2 bits (243), Expect = 4.230e-20 Identity = 74/269 (27.51%), Postives = 105/269 (39.03%), Query Frame = 1
Query: 37 CEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGSSSDH----------------------GSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQ---------LRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
C I R+L + YP D +P EL K+V W+EDRK+R +I +R LR PGP W +F YL+++ CP + G + LRG+ WL+ +A+A ++ED G Y A A G Q E T+ A+ G +Q L F G T D D A +L+MLYL+DLR+LQ+ +N ++ AQ KT
Sbjct: 20 CLENIERSLTALGYPAKDSFDHE---------EPVELTKLVAWLEDRKIRLYSIEERTALRNPGPAWGSAFKKYLEDLECPQSYIHAEG----RLEGSSLRGLRWLLHKAIAYEYEDKGSTYNARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLAVVAELCRRCGVRQSEDLLSTLRMLHLAIKVKYGSLEELANDQKEDIQQRLNLDNFPLGFSTEDPLLDKAAKLLKMLYLTDLRNLQNSINDILVTAQEFTANPKT 275
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A5J4XVR1_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XVR1_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 4.820e-11 Identity = 64/252 (25.40%), Postives = 105/252 (41.67%), Query Frame = 1
Query: 106 PATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLR-TPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAA------------------------------------RELFLANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
P ++LV A ++ W+E+ KVR +I DR+ L T P W F Y++++ CP +A+ S AAVL WL++ A++ +++D ++ AA ++L L + +++ AR + S Q PA + + A + H + GFT TGD+ D AT+LRMLY+ DLR LQ ++ + Q+ KT
Sbjct: 14 PKPSKNLVEDDVNFASLIVWLENTKVRQYSIEDRKALSDTRNPSWDGVFRKYVKDVQCPIALEAS-------SKAAVL---DWLLSYAISLEYQDQADKFNTAALSQSRHKPALSSSQQEQHVYTDIDDPQTSEAIQHLLKQLQLVDTNAPMESLQAAR-----NMVSDQLLPALEDSQLSSAAREAATQLSHLDVDKFPLGFT----TGDKKTDVAATILRMLYIKDLRGLQTIIDETLVNVQNYTANPKT 246
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A7S4A3V6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3V6_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 6.060e-10 Identity = 45/132 (34.09%), Postives = 65/132 (49.24%), Query Frame = 1
Query: 55 RALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCST 450
R L +EYP P G + +AK+V W+EDRK+R I R+PLRT G ++ +F SYLQE+ CP +PS A V WL+ EAV C+ ED + + A + + C++
Sbjct: 8 RLLDALEYP-------FPFAGDAAA-----VAKLVSWVEDRKIRLWEIEQRKPLRTAGVEFDAAFQSYLQELECPVL---------QPSQALV-----WLLHEAVKCELEDEAAKPQQADVDESRVSKLCAS 113
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A087SUE4_AUXPR (UPF0568 protein C14orf166-like protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SUE4_AUXPR) HSP 1 Score: 68.2 bits (165), Expect = 1.600e-9 Identity = 69/259 (26.64%), Postives = 103/259 (39.77%), Query Frame = 1
Query: 61 LRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPL-RTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKA---AARELF----------------LANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTA---------GDAMDTGPGGEHRTFREQ------LRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQST 732
LR ++YPG S P+ R+ + + +V W+E++K+R I R+ L T W ++ YL + CP SS + + WL + AV+ ++ D ++ A AA E+ A+P + M R D V P ++ S GD P G R L GF G TG D+ AT+LRMLYL DLR LQD V+ + Q++
Sbjct: 8 LRALKYPG---ASSFPSDTRASI-EVEAARPLVTWLENQKIRHYTIPQRQGLLATSADDWRAAYGQYLTALECPC------------SSEGLPATLQWLCSRAVSLEYADRNEQLNASTSAAVEVGGAVSDWSEHSLPPFADTASPAVAAAVMRMLRT-LHMDQEEVTPSTVERLSSVLDTQVLPALPGDEDTAAPSGTGRQGVSAAGPIALLAGFPLGFSTGSPLSDAAATILRMLYLRDLRGLQDVVDRELERVQAS 249
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A7S0TRU3_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TRU3_HEMAN) HSP 1 Score: 67.4 bits (163), Expect = 3.630e-9 Identity = 66/283 (23.32%), Postives = 113/283 (39.93%), Query Frame = 1
Query: 31 MACEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLR-TPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPS---SAAVLRGVSWLVTEAVACDFEDNGKEY-KAAARELFLANPRCS---------------------------------TQTMGGARGGSSSDH-----GSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
M A +R L+ +E+P + TG +V W+E+RK+R +DR+ L+ G W ++ Y+ E+G G+PS A + WL + A+ ++ D + K A L A P + T+G S+ G ++ + + + ++ AG + G + F ++ + G +TGDE + A++LR+LY++DLR LQDEVN +I+ Q KT
Sbjct: 16 MILGAACVRKLQALEHPQAAAMGDLDETG---------FRNLVLWLENRKIRYYTEADRKGLQDVKGKGWDDALLKYMDELGA-----------GKPSVKGDTAKHQVADWLASYAIGMEYSDRASKLSKIIAPRLAPAAPTHAPAAAAAPAQAKESLPEIELDAESPEFVEALHKLAATLGVPEDDSAEAMVRACAGVLKRKLSAEALAKAGSSQGGGKSKRRKAF--DVKDYPPGFDTGDEELNKAASLLRLLYVADLRKLQDEVNALISQMQEYTANPKT 276
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: T1K580_TETUR (Uncharacterized protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1K580_TETUR) HSP 1 Score: 66.2 bits (160), Expect = 6.210e-9 Identity = 68/264 (25.76%), Postives = 105/264 (39.77%), Query Frame = 1
Query: 55 RALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRT-PGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYK----------AAARELFLANPRCSTQTMGGARGGSSSDHGSVQ-------PEPAQQTIST-----------AGDAMDTGPGGEHRTFREQ---LRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
R L+ +E+ D+ + V + +V W+ED+K+R I +R LR P W +F YL+ + CP D K VL WL++ AV D+ DN +YK A+ ++ ANP + HG + P+ I+ DA+ + E T E+ L G + D+ A VLR+LY++DLR LQ+++N VI Q+ KT
Sbjct: 4 RKLKAIEFGKADNFN---------VEDENSFRNLVAWLEDQKIRHYPIEERSGLRKISSPDWENAFKKYLESLKCPFDVK---------DRKLVL---DWLISTAVRLDYNDNFDKYKDVTGKLVKNQASNPQMVQANPLDNLDFNA-----KEFKHGIGELAKLLKVPQHPDHLITLKAINHLIKTRLTADALQSEKE-ELETSGEKSFTLENSILGFDVKDQNLSRAAKVLRILYINDLRDLQNKINQVIVSIQAITANPKT 240
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: L8H731_ACACA (Homeobox prox 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H731_ACACA) HSP 1 Score: 63.2 bits (152), Expect = 4.720e-8 Identity = 60/225 (26.67%), Postives = 93/225 (41.33%), Query Frame = 1
Query: 178 KVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTAGDAMDTGPGGE------------------------HRTFREQLRG--------FTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKTAV 756
KVR L + DR+PLR +W F YL E+G A G + AA+ WLV A++ ++D+ Y AA+E R T + ++D+ S E ++ + + + + P + HR E R F G TGD D ATVLR+LY++DLR LQ ++N ++ Q+ + K+ V
Sbjct: 2 KVRHLKVEDRKPLRLFDAQWPSRFAHYLGELGWTGSVDADG------NEAAI----DWLVRYALSLAYDDHAGLYNEAAQEY----KRSRELTHAIQQLNKNTDYTS---EEFREAVLSLANVLGLPPHEDTLAVLKAIAHLVQRRFSAPALEEAHRQVGEDARTHEKGVLEKFPLGFSTGDSELDKAATVLRLLYVADLRELQSKINHLLVSVQNYTADPKSDV 209 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1599.3435.1 >prot_E-siliculosus-1a_F_contig1599.3435.1 ID=prot_E-siliculosus-1a_F_contig1599.3435.1|Name=mRNA_E-siliculosus-1a_F_contig1599.3435.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=243bp MACEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKback to top mRNA from alignment at E-siliculosus-1a_F_contig1599:27202..29154+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1599.3435.1 ID=mRNA_E-siliculosus-1a_F_contig1599.3435.1|Name=mRNA_E-siliculosus-1a_F_contig1599.3435.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1953bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1599:27202..29154+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1599:27202..29154+ >mRNA_E-siliculosus-1a_F_contig1599.3435.1 ID=mRNA_E-siliculosus-1a_F_contig1599.3435.1|Name=mRNA_E-siliculosus-1a_F_contig1599.3435.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1458bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1599:27202..29154+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |