mRNA_E-siliculosus-1a_F_contig1599.3435.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1599.3435.1
Unique NamemRNA_E-siliculosus-1a_F_contig1599.3435.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A6H5L7S2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S2_9PHAE)

HSP 1 Score: 434 bits (1115), Expect = 1.350e-151
Identity = 220/242 (90.91%), Postives = 225/242 (92.98%), Query Frame = 1
Query:   31 MACEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKTAV 756
            MACEARIIRALRTMEYPGLDH+SGS ATGRSLVAQPHELAKIVGWIEDRK+RGL ISDREPLRTPGPKW E+FFSYLQEMGCP+DFKATGGGGGEPS AAVLRGVSWLVTEAVA DFEDNGKEYKAAAREL LA  R S Q MGGARGGSSSD  SVQPEPAQQTISTAGDAMD G G EHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQ+EVNGVI LAQSTRREQKTAV
Sbjct:    1 MACEARIIRALRTMEYPGLDHISGSAATGRSLVAQPHELAKIVGWIEDRKIRGLTISDREPLRTPGPKWEEAFFSYLQEMGCPNDFKATGGGGGEPSGAAVLRGVSWLVTEAVAYDFEDNGKEYKAAARELLLAKTRFSPQAMGGARGGSSSDPSSVQPEPAQQTISTAGDAMDIGSGEEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQNEVNGVIDLAQSTRREQKTAV 242          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: D7G3K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K0_ECTSI)

HSP 1 Score: 422 bits (1084), Expect = 4.280e-147
Identity = 213/229 (93.01%), Postives = 218/229 (95.20%), Query Frame = 1
Query:   70 MEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKTAV 756
            MEYPGLDHVSGS A+GRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKW E  FSYLQEMGCP+DFKATGGGGGEPSSAAVLRGVSWLVTEAVACDF+DNGKEYKAAAREL LANPRCS Q +GGARGGSSSDHGSVQPEPAQ TISTAG AMD GPGGEHR FREQLRGFTAGVETGDEACDSVATVLRMLYLSDLR+LQDEVNGVIALAQSTRREQKTAV
Sbjct:    1 MEYPGLDHVSGSAASGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWEEVLFSYLQEMGCPNDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFDDNGKEYKAAAREL-LANPRCSPQAVGGARGGSSSDHGSVQPEPAQPTISTAGVAMDIGPGGEHRIFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRNLQDEVNGVIALAQSTRREQKTAV 228          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A7S1C4J5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4J5_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.930e-20
Identity = 81/266 (30.45%), Postives = 118/266 (44.36%), Query Frame = 1
Query:   31 MACEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYL--QEMGCPD-DFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGG-----SSSDHGSVQPEPAQQTISTAGDAMDT------------------GPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
            MA EA   R LR + YP               +   +E+  +V ++EDRKVR L +  R PLRT GP W ++F SY+    + CP     A    GGE   A +   V WL+  A+  ++ED  +   AAA  + +A+   S    G + GG     +++   ++ P  A   +   G A                       GG  RT    + G + G+ TGD A D    V R+LY+SDLR LQD VN ++   Q+   + KT
Sbjct:    1 MAEEASTRRRLRALAYPRWREFR---------LDDDNEVVLLVAFLEDRKVRALPMEARAPLRTAGPGWHDAFLSYVGGDPLNCPLLSAAAIEAAGGEVDRATLGACVMWLIGHAIGVEYEDVAEAANAAA--VRVASDSGSAPASGASGGGEEGADAAAVRAALTPIAALLGVRVDGRAPAELTEAVRRAVQRKVVPAVEAAGGAGRTLPLTMDGISGGLLTGDAALDRAIAVARLLYVSDLRQLQDSVNELLVSVQAYTADPKT 255          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A7S3Y2A7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2A7_HETAK)

HSP 1 Score: 98.2 bits (243), Expect = 4.230e-20
Identity = 74/269 (27.51%), Postives = 105/269 (39.03%), Query Frame = 1
Query:   37 CEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGSSSDH----------------------GSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQ---------LRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
            C   I R+L  + YP  D              +P EL K+V W+EDRK+R  +I +R  LR PGP W  +F  YL+++ CP  +    G        + LRG+ WL+ +A+A ++ED G  Y A A                                                G  Q E    T+     A+    G       +Q         L  F  G  T D   D  A +L+MLYL+DLR+LQ+ +N ++  AQ      KT
Sbjct:   20 CLENIERSLTALGYPAKDSFDHE---------EPVELTKLVAWLEDRKIRLYSIEERTALRNPGPAWGSAFKKYLEDLECPQSYIHAEG----RLEGSSLRGLRWLLHKAIAYEYEDKGSTYNARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLAVVAELCRRCGVRQSEDLLSTLRMLHLAIKVKYGSLEELANDQKEDIQQRLNLDNFPLGFSTEDPLLDKAAKLLKMLYLTDLRNLQNSINDILVTAQEFTANPKT 275          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A5J4XVR1_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XVR1_9CHLO)

HSP 1 Score: 72.4 bits (176), Expect = 4.820e-11
Identity = 64/252 (25.40%), Postives = 105/252 (41.67%), Query Frame = 1
Query:  106 PATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLR-TPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAA------------------------------------RELFLANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
            P   ++LV      A ++ W+E+ KVR  +I DR+ L  T  P W   F  Y++++ CP   +A+       S AAVL    WL++ A++ +++D   ++  AA                                    ++L L +     +++  AR     +  S Q  PA +    +  A +      H    +   GFT    TGD+  D  AT+LRMLY+ DLR LQ  ++  +   Q+     KT
Sbjct:   14 PKPSKNLVEDDVNFASLIVWLENTKVRQYSIEDRKALSDTRNPSWDGVFRKYVKDVQCPIALEAS-------SKAAVL---DWLLSYAISLEYQDQADKFNTAALSQSRHKPALSSSQQEQHVYTDIDDPQTSEAIQHLLKQLQLVDTNAPMESLQAAR-----NMVSDQLLPALEDSQLSSAAREAATQLSHLDVDKFPLGFT----TGDKKTDVAATILRMLYIKDLRGLQTIIDETLVNVQNYTANPKT 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A7S4A3V6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3V6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 6.060e-10
Identity = 45/132 (34.09%), Postives = 65/132 (49.24%), Query Frame = 1
Query:   55 RALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCST 450
            R L  +EYP        P  G +       +AK+V W+EDRK+R   I  R+PLRT G ++  +F SYLQE+ CP           +PS A V     WL+ EAV C+ ED   + + A  +    +  C++
Sbjct:    8 RLLDALEYP-------FPFAGDAAA-----VAKLVSWVEDRKIRLWEIEQRKPLRTAGVEFDAAFQSYLQELECPVL---------QPSQALV-----WLLHEAVKCELEDEAAKPQQADVDESRVSKLCAS 113          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A087SUE4_AUXPR (UPF0568 protein C14orf166-like protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SUE4_AUXPR)

HSP 1 Score: 68.2 bits (165), Expect = 1.600e-9
Identity = 69/259 (26.64%), Postives = 103/259 (39.77%), Query Frame = 1
Query:   61 LRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPL-RTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKA---AARELF----------------LANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTA---------GDAMDTGPGGEHRTFREQ------LRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQST 732
            LR ++YPG    S  P+  R+ + +      +V W+E++K+R   I  R+ L  T    W  ++  YL  + CP             SS  +   + WL + AV+ ++ D  ++  A   AA E+                  A+P  +   M   R     D   V P   ++  S           GD     P G  R           L GF  G  TG    D+ AT+LRMLYL DLR LQD V+  +   Q++
Sbjct:    8 LRALKYPG---ASSFPSDTRASI-EVEAARPLVTWLENQKIRHYTIPQRQGLLATSADDWRAAYGQYLTALECPC------------SSEGLPATLQWLCSRAVSLEYADRNEQLNASTSAAVEVGGAVSDWSEHSLPPFADTASPAVAAAVMRMLRT-LHMDQEEVTPSTVERLSSVLDTQVLPALPGDEDTAAPSGTGRQGVSAAGPIALLAGFPLGFSTGSPLSDAAATILRMLYLRDLRGLQDVVDRELERVQAS 249          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: A0A7S0TRU3_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TRU3_HEMAN)

HSP 1 Score: 67.4 bits (163), Expect = 3.630e-9
Identity = 66/283 (23.32%), Postives = 113/283 (39.93%), Query Frame = 1
Query:   31 MACEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLR-TPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPS---SAAVLRGVSWLVTEAVACDFEDNGKEY-KAAARELFLANPRCS---------------------------------TQTMGGARGGSSSDH-----GSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
            M   A  +R L+ +E+P    +     TG            +V W+E+RK+R    +DR+ L+   G  W ++   Y+ E+G            G+PS     A  +   WL + A+  ++ D   +  K  A  L  A P  +                                   T+G     S+        G ++ + + + ++ AG +   G     + F   ++ +  G +TGDE  +  A++LR+LY++DLR LQDEVN +I+  Q      KT
Sbjct:   16 MILGAACVRKLQALEHPQAAAMGDLDETG---------FRNLVLWLENRKIRYYTEADRKGLQDVKGKGWDDALLKYMDELGA-----------GKPSVKGDTAKHQVADWLASYAIGMEYSDRASKLSKIIAPRLAPAAPTHAPAAAAAPAQAKESLPEIELDAESPEFVEALHKLAATLGVPEDDSAEAMVRACAGVLKRKLSAEALAKAGSSQGGGKSKRRKAF--DVKDYPPGFDTGDEELNKAASLLRLLYVADLRKLQDEVNALISQMQEYTANPKT 276          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: T1K580_TETUR (Uncharacterized protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1K580_TETUR)

HSP 1 Score: 66.2 bits (160), Expect = 6.210e-9
Identity = 68/264 (25.76%), Postives = 105/264 (39.77%), Query Frame = 1
Query:   55 RALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRKVRGLAISDREPLRT-PGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYK----------AAARELFLANPRCSTQTMGGARGGSSSDHGSVQ-------PEPAQQTIST-----------AGDAMDTGPGGEHRTFREQ---LRGFTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKT 750
            R L+ +E+   D+ +         V   +    +V W+ED+K+R   I +R  LR    P W  +F  YL+ + CP D K             VL    WL++ AV  D+ DN  +YK          A+  ++  ANP  +              HG  +       P+     I+              DA+ +    E  T  E+   L     G +  D+     A VLR+LY++DLR LQ+++N VI   Q+     KT
Sbjct:    4 RKLKAIEFGKADNFN---------VEDENSFRNLVAWLEDQKIRHYPIEERSGLRKISSPDWENAFKKYLESLKCPFDVK---------DRKLVL---DWLISTAVRLDYNDNFDKYKDVTGKLVKNQASNPQMVQANPLDNLDFNA-----KEFKHGIGELAKLLKVPQHPDHLITLKAINHLIKTRLTADALQSEKE-ELETSGEKSFTLENSILGFDVKDQNLSRAAKVLRILYINDLRDLQNKINQVIVSIQAITANPKT 240          
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Match: L8H731_ACACA (Homeobox prox 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H731_ACACA)

HSP 1 Score: 63.2 bits (152), Expect = 4.720e-8
Identity = 60/225 (26.67%), Postives = 93/225 (41.33%), Query Frame = 1
Query:  178 KVRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAAVLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGSSSDHGSVQPEPAQQTISTAGDAMDTGPGGE------------------------HRTFREQLRG--------FTAGVETGDEACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKTAV 756
            KVR L + DR+PLR    +W   F  YL E+G      A G      + AA+     WLV  A++  ++D+   Y  AA+E      R    T    +   ++D+ S   E  ++ + +  + +   P  +                        HR   E  R         F  G  TGD   D  ATVLR+LY++DLR LQ ++N ++   Q+   + K+ V
Sbjct:    2 KVRHLKVEDRKPLRLFDAQWPSRFAHYLGELGWTGSVDADG------NEAAI----DWLVRYALSLAYDDHAGLYNEAAQEY----KRSRELTHAIQQLNKNTDYTS---EEFREAVLSLANVLGLPPHEDTLAVLKAIAHLVQRRFSAPALEEAHRQVGEDARTHEKGVLEKFPLGFSTGDSELDKAATVLRLLYVADLRELQSKINHLLVSVQNYTADPKSDV 209          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5L7S2_9PHAE1.350e-15190.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3K0_ECTSI4.280e-14793.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1C4J5_9STRA2.930e-2030.45Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3Y2A7_HETAK4.230e-2027.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J4XVR1_9CHLO4.820e-1125.40Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A7S4A3V6_9STRA6.060e-1034.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A087SUE4_AUXPR1.600e-926.64UPF0568 protein C14orf166-like protein n=2 Tax=Aux... [more]
A0A7S0TRU3_HEMAN3.630e-923.32Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
T1K580_TETUR6.210e-925.76Uncharacterized protein n=1 Tax=Tetranychus urtica... [more]
L8H731_ACACA4.720e-826.67Homeobox prox 1, putative n=1 Tax=Acanthamoeba cas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1599contigE-siliculosus-1a_F_contig1599:27202..29154 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size729
Model size968
Exons3
Ec32 orthologEc-19_004940.1
Ec32 ortholog descriptionProtein of unknown function UPF0568
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03016,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC2.7.4.3
EggNOG OGsKOG4380@1,KOG4380@2759
EggNOG free text desc.RNA polymerase II complex binding
GOsGO:0000394,GO:0000993,GO:0001098,GO:0001099,GO:0001932,GO:0001933,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0006139,GO:0006355,GO:0006357,GO:0006388,GO:0006396,GO:0006399,GO:0006403,GO:0006469,GO:0006725,GO:0006807,GO:0006810,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0015630,GO:0015931,GO:0016070,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032991,GO:0033036,GO:0033673,GO:0034470,GO:0034641,GO:0034660,GO:0042325,GO:0042326,GO:0042802,GO:0043086,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0044092,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045859,GO:0045893,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051338,GO:0051348,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0070063,GO:0071702,GO:0071704,GO:0071705,GO:0072669,GO:0072686,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
KEGG ModuleM00049
KEGG Pathwayko00230,ko01100,ko01110,ko01130,ko03008,map00230,map01100,map01110,map01130,map03008
KEGG ReactionR00127,R01547
KEGG koko:K15433,ko:K18532
KEGG rclassRC00002
Preferred nameC14orf166
Seed eggNOG ortholog2880.D7G3K0
Seed ortholog evalue2e-116
Seed ortholog score425.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1599.3435.1prot_E-siliculosus-1a_F_contig1599.3435.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1599 27232..28945 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928110.7006676-UTR-E-siliculosus-1a_F_contig1599:27201..272311622928110.7006676-UTR-E-siliculosus-1a_F_contig1599:27201..27231Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1599 27202..27231 +
1696318808.389731-UTR-E-siliculosus-1a_F_contig1599:27201..272311696318808.389731-UTR-E-siliculosus-1a_F_contig1599:27201..27231Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1599 27202..27231 +
1622928110.7530954-UTR-E-siliculosus-1a_F_contig1599:28945..291541622928110.7530954-UTR-E-siliculosus-1a_F_contig1599:28945..29154Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1599 28946..29154 +
1696318808.4293902-UTR-E-siliculosus-1a_F_contig1599:28945..291541696318808.4293902-UTR-E-siliculosus-1a_F_contig1599:28945..29154Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1599 28946..29154 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928110.7154374-CDS-E-siliculosus-1a_F_contig1599:27231..273811622928110.7154374-CDS-E-siliculosus-1a_F_contig1599:27231..27381Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1599 27232..27381 +
1696318808.4022336-CDS-E-siliculosus-1a_F_contig1599:27231..273811696318808.4022336-CDS-E-siliculosus-1a_F_contig1599:27231..27381Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1599 27232..27381 +
1622928110.7274427-CDS-E-siliculosus-1a_F_contig1599:27920..281601622928110.7274427-CDS-E-siliculosus-1a_F_contig1599:27920..28160Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1599 27921..28160 +
1696318808.411626-CDS-E-siliculosus-1a_F_contig1599:27920..281601696318808.411626-CDS-E-siliculosus-1a_F_contig1599:27920..28160Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1599 27921..28160 +
1622928110.7394993-CDS-E-siliculosus-1a_F_contig1599:28606..289451622928110.7394993-CDS-E-siliculosus-1a_F_contig1599:28606..28945Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1599 28607..28945 +
1696318808.420812-CDS-E-siliculosus-1a_F_contig1599:28606..289451696318808.420812-CDS-E-siliculosus-1a_F_contig1599:28606..28945Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1599 28607..28945 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1599.3435.1

>prot_E-siliculosus-1a_F_contig1599.3435.1 ID=prot_E-siliculosus-1a_F_contig1599.3435.1|Name=mRNA_E-siliculosus-1a_F_contig1599.3435.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=243bp
MACEARIIRALRTMEYPGLDHVSGSPATGRSLVAQPHELAKIVGWIEDRK
VRGLAISDREPLRTPGPKWAESFFSYLQEMGCPDDFKATGGGGGEPSSAA
VLRGVSWLVTEAVACDFEDNGKEYKAAARELFLANPRCSTQTMGGARGGS
SSDHGSVQPEPAQQTISTAGDAMDTGPGGEHRTFREQLRGFTAGVETGDE
ACDSVATVLRMLYLSDLRSLQDEVNGVIALAQSTRREQKTAV*
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mRNA from alignment at E-siliculosus-1a_F_contig1599:27202..29154+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1599.3435.1 ID=mRNA_E-siliculosus-1a_F_contig1599.3435.1|Name=mRNA_E-siliculosus-1a_F_contig1599.3435.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1953bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1599:27202..29154+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGCGTGTGCTGGAGCACCTAGCTTTCAAGCATGGCATGCGAAGCACGTAT CATTCGCGCGTTGCGCACGATGGAGTACCCGGGGTTGGACCACGTCTCAG GATCGCCAGCAACAGGTCGGAGTTTGGTTGCGCAGCCTCATGAGCTCGCC AAGATCGTCGGTTGGATAGAGGACAGAAAGGTGTGTGGGGCGGGCTTGGT ACACGGAGAAGGAACAAGGACTGGAAGGTCTACCTGTTGGTGGTAGTTTG CAGGGGCTACCAGAGCATCCTTGTGTAGGTAGCCATTCACGTTCAAGGGT GGGTAATGGATGACTAGAGGTAATTTTTGTCATTGCCCAAACACCCCTTC CAGCAAGCACACCGCAGCAGTAGTAGCATCGCGCAGAGGGCGTGCACTAC TGCCCTGTACAATCGTCTCGACAGCTGCTGATTATTTTGCTATCAAACAC CGTTCGTATGGGGTTGGTGTACATCTAGATAGAGCACGACACCAAATATA TGGCACATTCACGAATGAAAGAGAGAAACTGTTATATCCCCGGCTGCGTG ACCGACCCCATGGTTGCTTCTGTCGCCGCGATGGCCTACAGCATCTATCC GAGATAAACTCTCCGCATAAATATAGGAGGCGGCCGCGTATGCCTGCTCC ACGATATCCCCCCCGCCCGCCCCCTTCGCTTGGGCTGTTACATCTGGTGA TGTGTGTGGTATTGTTTAGGTCCGAGGCCTCGCCATCTCCGACCGTGAGC CCCTGCGCACCCCCGGGCCAAAATGGGCAGAGTCGTTTTTTAGCTACTTG CAGGAGATGGGTTGCCCCGACGATTTCAAGGCAACCGGGGGAGGCGGAGG GGAGCCAAGTAGTGCCGCCGTCCTGCGGGGAGTATCGTGGTTGGTTACCG AGGCCGTGGCCTGTGATTTCGAGGACAACGGGAAGGAATACAAGGCTGCT GCTAGAGAGGTACGAGCGTTCCTTTGCGATAGATCTTTGCTTCGGTCTGC AACAGGCGGCGATTGGTGTCAATAGATCAGTGAGTTCGTTCAAACACGGC TGTTCGCAACATGTTGTCTTCGTGTCGATGCGTACATTCGTGTTGTGGAA TGGCAACTCACGAAAGACATGGCGTTGGCTTCGAAGGGGGGCGTATCACG GCACGTTTACCACGCATGTACAGGTCAGGTACTGCTAGGTGTTGTTTTGA CCAAGCACAAGAAAATTGTCTACCGACCTCTTGTGTGTGAAGATTACTAC TATTTCTTTCTATGCTACAATGCCAATCTTTTCTCTCTGAGAGACTTGTT ATCGCCCCCTTTACTGATCATCAGTCAATCTCACTCTCTCCCGCCATCCT CACCGACACACGACGGTTACCTGTAAATCTCCTCTACAAACACCAAATTC TGCAGTTGTTCTTGGCGAACCCGCGGTGTTCTACACAAACCATGGGAGGG GCAAGAGGCGGCAGCAGCAGCGACCATGGCTCGGTGCAGCCAGAACCGGC GCAGCAAACCATCAGTACTGCCGGCGATGCCATGGACACCGGTCCTGGAG GAGAACACCGAACATTCCGCGAGCAGCTCAGGGGGTTCACGGCAGGGGTA GAGACTGGGGACGAGGCTTGCGACAGCGTGGCGACAGTGCTTCGGATGCT CTACTTGTCGGACTTGAGGAGTCTGCAGGACGAGGTTAACGGTGTCATAG CCTTGGCGCAGTCCACTAGACGAGAACAGAAAACAGCAGTGTGACGACAA CGAATGTTGCTGTTGATAACGAGATCCTCCTCCGTAGAAGGGTGCTTTGA ACATGGGGTGTGACGAGAGGTAGACATTTCGGGTTTGCTTTTTCGATCTG CCGCAACATGGACACCAGTTGTTGGCGCTCGTCCGGGAGAAGAGAGTCGT GCAAATATTTGAATCCACCCGTGCCCTCGGTGAGCGGGAGGGGTCGTGGC TGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1599:27202..29154+

>mRNA_E-siliculosus-1a_F_contig1599.3435.1 ID=mRNA_E-siliculosus-1a_F_contig1599.3435.1|Name=mRNA_E-siliculosus-1a_F_contig1599.3435.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1458bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1599:27202..29154+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCATGCGAAGCACGTATCATTCGCGCGTTGCGCACGATGGAGTACCC
GGGGTTGGACCACGTCTCAGGATCGCCAGCAACAGGTCGGAGTTTGGTTG
CGCAGCCTCATGAGCTCGCCAAGATCGTCGGTTGGATAGAGGACAGAAAG
ATGGCATGCGAAGCACGTATCATTCGCGCGTTGCGCACGATGGAGTACCC
GGGGTTGGACCACGTCTCAGGATCGCCAGCAACAGGTCGGAGTTTGGTTG
CGCAGCCTCATGAGCTCGCCAAGATCGTCGGTTGGATAGAGGACAGAAAG
GTCCGAGGCCTCGCCATCTCCGACCGTGAGCCCCTGCGCACCCCCGGGCC
AAAATGGGCAGAGTCGTTTTTTAGCTACTTGCAGGAGATGGGTTGCCCCG
ACGATTTCAAGGCAACCGGGGGAGGCGGAGGGGAGCCAAGTAGTGCCGCC
GTCCTGCGGGGAGTATCGTGGTTGGTTACCGAGGCCGTGGCCTGTGATTT
CGAGGACAACGGGAAGGAATACAAGGCTGCTGCTAGAGAGGTCCGAGGCC
TCGCCATCTCCGACCGTGAGCCCCTGCGCACCCCCGGGCCAAAATGGGCA
GAGTCGTTTTTTAGCTACTTGCAGGAGATGGGTTGCCCCGACGATTTCAA
GGCAACCGGGGGAGGCGGAGGGGAGCCAAGTAGTGCCGCCGTCCTGCGGG
GAGTATCGTGGTTGGTTACCGAGGCCGTGGCCTGTGATTTCGAGGACAAC
GGGAAGGAATACAAGGCTGCTGCTAGAGAGTTGTTCTTGGCGAACCCGCG
GTGTTCTACACAAACCATGGGAGGGGCAAGAGGCGGCAGCAGCAGCGACC
ATGGCTCGGTGCAGCCAGAACCGGCGCAGCAAACCATCAGTACTGCCGGC
GATGCCATGGACACCGGTCCTGGAGGAGAACACCGAACATTCCGCGAGCA
GCTCAGGGGGTTCACGGCAGGGGTAGAGACTGGGGACGAGGCTTGCGACA
GCGTGGCGACAGTGCTTCGGATGCTCTACTTGTCGGACTTGAGGAGTCTG
CAGGACGAGGTTAACGGTGTCATAGCCTTGGCGCAGTCCACTAGACGAGA
ACAGAAAACAGCAGTGTGATTGTTCTTGGCGAACCCGCGGTGTTCTACAC
AAACCATGGGAGGGGCAAGAGGCGGCAGCAGCAGCGACCATGGCTCGGTG
CAGCCAGAACCGGCGCAGCAAACCATCAGTACTGCCGGCGATGCCATGGA
CACCGGTCCTGGAGGAGAACACCGAACATTCCGCGAGCAGCTCAGGGGGT
TCACGGCAGGGGTAGAGACTGGGGACGAGGCTTGCGACAGCGTGGCGACA
GTGCTTCGGATGCTCTACTTGTCGGACTTGAGGAGTCTGCAGGACGAGGT
TAACGGTGTCATAGCCTTGGCGCAGTCCACTAGACGAGAACAGAAAACAG
CAGTGTGA
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