mRNA_E-siliculosus-1a_F_contig1592.3404.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1592.3404.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1592.3404.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Match: D7FT42_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT42_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 1.140e-170
Identity = 255/261 (97.70%), Postives = 257/261 (98.47%), Query Frame = 3

Query:  120 MSWRWRNGSAAVALLVAVLLPRGQPFANSPCCSFRISSGNPATKRALPSRNVNMRAEGPSGQIGTSRAAFLRSALGGAAALATVVARPTETPAFALPFGPKDNPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKTRYEIAPLDPEGAPDGDQLGIFGCSFYGMKRTDGSSRCQPDP 902
            MSWRW NGSAAVALLVAVLL RGQPF NSPCCSFR+SSGNPATKRALP RNVNMRAEGPSGQIGTSRAAFLRSALGGAAALATVVARPTETPAFALPFGPKDNPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRE+RERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKTRYEIAPLDPEGAPDGDQLGIFGCSFYGMKRTDGSSRCQPDP
Sbjct:    1 MSWRWHNGSAAVALLVAVLLRRGQPFVNSPCCSFRVSSGNPATKRALP-RNVNMRAEGPSGQIGTSRAAFLRSALGGAAALATVVARPTETPAFALPFGPKDNPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRENRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKTRYEIAPLDPEGAPDGDQLGIFGCSFYGMKRTDGSSRCQPDP 260

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Match: A0A835Z595_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z595_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.330e-38
Identity = 91/192 (47.40%), Postives = 119/192 (61.98%), Query Frame = 3

Query:  333 RSALGGAAALATVVARPTETPAFALPFGPKDNPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKTRYEI---APLDPEGAPDGDQLGIFGCSFYGMKRTDGSSRCQPD 899
            R  L  A A  T  A     PA AL FG  D P    + ++A Y+  V+KL  DLK+  LKGGPEDS+VV R ++ Y +P+Q  M K AP + LAG+E +ER   L L+MKGHLLEL AAC  ++A EQL+E +EV+ETL+EF+ LA T+Y+I   AP  P  A   +  G FGC  +G KR   S+ C+PD
Sbjct:   48 RGLLTTAVATVTAAAVVAPGPAHAL-FGSSD-PTQTSIEELARYTVQVDKLISDLKSKNLKGGPEDSLVVFRTMKTYFDPLQATMAKAAPTLGLAGQEQQERAVTLSLLMKGHLLELTAACTAQNAGEQLKETEEVQETLEEFLKLAGTKYKIPTYAP--PRSATPAEYYGAFGCEAWGQKRMPNSNSCEPD 235

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Match: A0A0G4H1C3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H1C3_VITBC)

HSP 1 Score: 134 bits (337), Expect = 4.830e-32
Identity = 74/179 (41.34%), Postives = 111/179 (62.01%), Query Frame = 3

Query:  366 TVVARPTETPAFALPFGPKDNPELEEVV-KVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKTRYEIAPLD--PEGAPDGDQLGIFGCSFYGMKRTDGSSRCQ 893
            +++A P+ + A +LPF   +  ++E  V ++A Y  +V K+   LK G LKGG  DS  V   L +Y  PMQE+M  ++  + L      ER++LLPL++KGHL EL+ A  ++  + QLEEV+EV ETL+EF+ LA  +Y I P+   P+  P+ D  GIFGC F+G +R   S+RC+
Sbjct:   71 SLLASPSPSSAISLPFFESEEQKIERAVGEIADYRPYVLKILDKLKTGKLKGGTYDSGTVANFLGIYYRPMQEKMETLSAKIDLEDTTKTERLRLLPLLLKGHLAELREAVISQRPERQLEEVEEVGETLNEFLTLASAKYTIPPIPVPPDFNPEKDYYGIFGCEFWGKRRLPESNRCE 249

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Match: A0A6T5MXS9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MXS9_HETAK)

HSP 1 Score: 123 bits (308), Expect = 2.580e-28
Identity = 70/163 (42.94%), Postives = 100/163 (61.35%), Query Frame = 3

Query:  411 FGPKDNPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKTRYEIAP-LDPEGAPDGDQLGIFGCSFYGMKRTDGSSRCQP 896
            FG   + E   V  +AGY   V  + + LKA  L+GG +DS VV    + Y EP+Q +M ++A  ++LA  E +++ +  PL+MKGHLLEL  AC   DAKEQLEE++EV+ETLD+F+ LA T+Y +   L    A   +   IFGC F+G+K    S+ C+P
Sbjct:   63 FGENKSKEQLAVEALAGYRAPVADVIRQLKARELRGGRDDSAVVTNYAKKYFEPLQADMAQLAKGLKLA-EEDQKKAETQPLLMKGHLLELAQACAAGDAKEQLEEMEEVQETLDDFLKLAATKYTVPEMLLGRAATSVEYYSIFGCEFWGLKNKPDSNVCEP 224

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Match: A0A7S1UC06_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC06_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.490e-25
Identity = 69/160 (43.12%), Postives = 95/160 (59.38%), Query Frame = 3

Query:  426 NPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKTRYEIAPLDPEGAPDGD-----QLGIFGCSFYGMKRTDGSSRC 890
            NP   +V +V      V+ +   LK   LKGG EDS  V R    Y + + E M   A + +L G + +ER+ LLP +MKGH+LEL+AAC ++ A+EQL+E+ E+ ET+DEFIAL K + +I P     + DG+       G FGC FYGMKR  GS+ C
Sbjct:   91 NPLEGKVNEVMKLKPQVDLVRSMLKKKELKGGQEDSATVFRYSRAYFKDIPERMGAAAGVAKLPGSQ-QERLGLLPNLMKGHILELEAACKSQSAEEQLKEMDEISETIDEFIALVKDQVKIKPQKMLYSGDGNVDPEAYFGPFGCDFYGMKRKQGSNSC 249

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Match: W7U1E9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1E9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.140e-23
Identity = 74/187 (39.57%), Postives = 113/187 (60.43%), Query Frame = 3

Query:  348 GAAALATVVARPTETPAFALPFGPKDNPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKT--RYEIAP-LDPEGAPDGD---QLGIFGCSFYGMKRTDGSSRC 890
            G AA   ++  P  T A A PFG  D     ++  VA   + V ++   LK+  LKGG +DS  V+R ++ + +P+QE+M+ +AP M++   E ++R++ LPL++KGHL EL AA  T  A EQL+E++EV E++DEF+ALA+   RY++   L P  AP+ D   + G F C F+G  R   S+ C
Sbjct:   80 GFAASGLILQYPRRTEA-AFPFG-GDGDVAGQLDDVARARQKVEEVLSGLKSKQLKGGKDDSATVVRYMDAHYKPLQEKMVTLAPKMKVGDEEKQKRLETLPLLLKGHLFELAAAARTGVAAEQLQEMEEVAESVDEFLALARESGRYQVRDYLGP--APEFDVKREYGPFACEFWGKVRLPESNVC 262

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Match: A0A0G4FUV0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FUV0_9ALVE)

HSP 1 Score: 82.0 bits (201), Expect = 2.610e-13
Identity = 54/165 (32.73%), Postives = 89/165 (53.94%), Query Frame = 3

Query:  414 GPKDNPEL---EEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAP-LMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAKTRYEIAPL-DPEGAPDGDQLGIFGCSFYGMKRTDG-SSRC 890
            GP++  E    E V ++A +   V  + + LK G+  G  +D+V V     +  + MQ++M + AP + +   R+  ER+K+LP +M GH+LEL  A      + Q+  +Q++  TLD+F+ LA  ++ I P+  P+     +  GIF C F+G KR    S RC
Sbjct:  118 GPEEASEARKAEMVKEIANFRPQVLWILRKLKDGSFSGQEDDAVAVAMTATMQYKKMQKKMEEYAPEIAKSLERKDGERLKVLPDLMTGHILELFQAVSMAAVRPQINAMQKIGGTLDDFLILASNKFVIPPIPQPKAQTAEEYYGIFSCEFWGKKRAGPYSGRC 282

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Match: A0A7S0ZKH1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKH1_9RHOD)

HSP 1 Score: 65.1 bits (157), Expect = 1.270e-8
Identity = 41/119 (34.45%), Postives = 70/119 (58.82%), Query Frame = 3

Query:  420 KDNPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLEPMQEEMLKVAPLMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQLEEVQEVRETLDEFIALAK 776
            +D   + ++  VAG    V K+++++K    +   +D+V+V  ++ +++EP+   M  +A   Q        RV +LPL M+GHL+ELKAA    +  + LEE++EV E+ DEF+AL K
Sbjct:   56 EDVERINKIELVAGLREKVMKIQKEVK-DLKQFTDDDAVLVKSLIPLWIEPLIPAMSDIA---QSLNAPQSSRVAILPLAMQGHLIELKAAAAAVNKTQVLEELEEVVESADEFLALMK 170

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1592.3404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 8


Match Name	E-value	Identity	Description
D7FT42_ECTSI	1.140e-170	97.70	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z595_9STRA	3.330e-38	47.40	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A0G4H1C3_VITBC	4.830e-32	41.34	Uncharacterized protein n=2 Tax=Vitrella brassicaf...	[more]
A0A6T5MXS9_HETAK	2.580e-28	42.94	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S1UC06_9STRA	3.490e-25	43.13	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
W7U1E9_9STRA	2.140e-23	39.57	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A0G4FUV0_9ALVE	2.610e-13	32.73	Uncharacterized protein n=1 Tax=Chromera velia CCM...	[more]
A0A7S0ZKH1_9RHOD	1.270e-8	34.45	Hypothetical protein n=1 Tax=Timspurckia oligopyre...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1592	contig	E-siliculosus-1a_F_contig1592:10427..17600 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	786
Model size	1827
Exons	8
Ec32 ortholog	Ec-04_002750.1
Ec32 ortholog description	expressed unknown protein
Hectar predicted targeting category	signal peptide

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1592.3404.1	prot_E-siliculosus-1a_F_contig1592.3404.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1592 11349..17481 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928105.0310671-UTR-E-siliculosus-1a_F_contig1592:10426..11348	1622928105.0310671-UTR-E-siliculosus-1a_F_contig1592:10426..11348	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1592 10427..11348 -
1696318806.2146034-UTR-E-siliculosus-1a_F_contig1592:10426..11348	1696318806.2146034-UTR-E-siliculosus-1a_F_contig1592:10426..11348	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1592 10427..11348 -
1622928105.2229316-UTR-E-siliculosus-1a_F_contig1592:17481..17600	1622928105.2229316-UTR-E-siliculosus-1a_F_contig1592:17481..17600	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1592 17482..17600 -
1696318806.3235552-UTR-E-siliculosus-1a_F_contig1592:17481..17600	1696318806.3235552-UTR-E-siliculosus-1a_F_contig1592:17481..17600	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1592 17482..17600 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1592:10427..17600-
coding sequence from alignment at E-siliculosus-1a_F_contig1592:10427..17600-

protein sequence of mRNA_E-siliculosus-1a_F_contig1592.3404.1

>prot_E-siliculosus-1a_F_contig1592.3404.1 ID=prot_E-siliculosus-1a_F_contig1592.3404.1|Name=mRNA_E-siliculosus-1a_F_contig1592.3404.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=262bp
MSWRWRNGSAAVALLVAVLLPRGQPFANSPCCSFRISSGNPATKRALPSR
NVNMRAEGPSGQIGTSRAAFLRSALGGAAALATVVARPTETPAFALPFGP
KDNPELEEVVKVAGYSRFVNKLEQDLKAGALKGGPEDSVVVLRVLEVYLE
PMQEEMLKVAPLMQLAGRESRERVKLLPLIMKGHLLELKAACGTKDAKEQ
LEEVQEVRETLDEFIALAKTRYEIAPLDPEGAPDGDQLGIFGCSFYGMKR
TDGSSRCQPDP*

mRNA from alignment at E-siliculosus-1a_F_contig1592:10427..17600-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1592.3404.1 ID=mRNA_E-siliculosus-1a_F_contig1592.3404.1|Name=mRNA_E-siliculosus-1a_F_contig1592.3404.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7174bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1592:10427..17600- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCTGTTTGCTGAGTCAAGCCGCACTTTTTGGAAGGTGCCTGTGCGGTGAC
GGTGGCAATCTATCCATTACGTTACCAACGACAGCCTGCTCACATCCTGG
GCATAGCGGTGCCAAGACGATGTCCTGGAGATGGCGCAATGGATCAGCAG
CTGTGGCTCTGCTGGTTGCGGTTCTCCTGCCCCGGGGCCAGCCGTTCGCC
AACAGTCCATGTTGTTCGTTCCGCATCAGCAGCGGTAACCCTGCAACCAA
GCGAGCATTGCCAAGGTATGCCGTGCCGTCAACGACCTAGCCGCCCATGA
TCATCGCCAACAGCTCATCTGAACACCAAGAGGTGGACCGGTGTTCGCCG
AGGAACACGCTTCCACACCGCCGCGGTGGCAGTGTCTGTGCACAGCAGCA
ATCGTCGTCATCCGCATTATTTCCTTCCCTACGTGTTTGTGTGTGGTGCT
CGCTGAGATACATAGATGACTCTGCTGACGGTGTGTGTTGAAGCAGGAAC
GTCAACATGCGTGCAGAGGGGCCATCCGGCCAGATCGGCACCAGTAGGGC
AGCTTTTCTCAGGAGTGCGCTAGGCGGTGCTGCTGCGCTTGCCACGGTTG
TCGCCAGGCCAACGGAAACGCCCGCGTTCGGTGAGAGAGTGTGGGACACA
CACGTGGCTATGCATATCATCTGTCATGTGGTGTGTGCAGCAGGGGTGGG
TGCAGATGTGCTGCCACCTCTCCTCTCCTCTCCTGCAGCTGCTGCCCGCC
CAAGTGTTGCTGCAGCAGCAGAGTCTGTTACAAGAGCATTGCGTCACGTT
TGATTCGAGGTTTTGCTTGATGTCTCCGAAGCACTGGTTATTCGGATCAG
CAGCTTGCTGTTTTTCTAGAAGCAGAACTGGCTGTCTTCTCTTGTAGGAA
GGGGACACACATACAACGCATACGCCCGCGCCGTTCAGGATCTGAAAGGA
GTGCGCCGGGAAAAGGTGTAGTGGGTTACCATGGCAATCTCAAATTATAT
GTGTGACTGTTGCGCTACACCCATAGCAGCGTTCTGCTCGCCGGGCTGCC
TCGTGATGTTAATTGTCCAGCAGCAGCACTAGGTGACGTAAGATATCACA
CCCCCTGGACCGATTTCAAAGATCGATTACTTCAACGGAGAAACAGCATT
GATGGTGCCGTAGATGGCGTCGTTGGCAACCGCCTCATCAAGAGCTTTCC
GAAAACGTATCGTTTGACTCTTACATCCTCTTTGTTGTGGAGCAATCGAG
CTTTCAAAATCTTTCCAGGGGGTGTGATATCTTGTGTCATGTACGGACGT
GCGGCATGAACCTTCCAACACACTGCTGTCACCGCATTGGAGAGCGCCGC
ATAATGGTTCAAGTCTTGTCAAGTACTGACGACAGACTCTCCTCCGTGAT
ATGCGGCAACTTGATCATGTCGAGTCGTACAACCACTGCTGATTGTTCCA
AACTGTACCGTACAACAACGTACCACGGCCACTTTGGGCCGATTTTCAAA
GCTCTGTTACTCCACACAGCAGTAGACATAGTGGCGGCGTTGGGAACCAT
CTTGTCGACATCAGTGCGAAAACATGTCGTTTGGCTGTGGCATCCTCTTC
GTCGTGAAGTAGTCGAGATTTGACCGCCGGTCCGGGGGAGTGTGGTATCT
TACGTCACTTACGGAATGCGTATACAGACACACGTGTGCTGTCGCCTGCA
GCACCTTCCACCTCCCTCCCCTCCCGGCTCCACACCACACGCAAGAAATT
CCGTTCACAGATGGCAAAACTTATGAAGGGGGCCAGATGTTGGCCATGCC
TCTCATGGCAGTTCGTAAGGATGCTCGGTCTCGAACGCCATGCGTGGACC
ATGGTCAACCGACCACAAGTCGCCAAACAGTAATATCCTGCCCCCCCCCT
GTCTCATGCCCCCGCTCTTCGCGCAAGCGCTGCCCTTCGGGCCTAAAGAC
AACCCAGAACTGGAGGAGGTGGTCAAGGTGGCCGGGTACTCTAGGTTCGT
CAACAAGGTGCGTGAAATCCTTCCGGATGCCGCCTCGTGACTGCACGTTC
TGCGGCACACAACCCACACCCTTCGGTCGGATTTCCGAAGACCGATGAAT
AGGCAGTGAAGCTATTGATTGCCATTGCCGAAGATACGCGTCGTCCCCGC
CTTTCCCTCCTGATGCGTAGGTATCGAGCCCGCGAAGAAACGGCCCAAGA
GGCGTGGTATCCTTGTCGACTTGTGTTAAGATGTACACCATTAATATTAC
TTGCTAAGATGTGTACAGCATATCCATTATGCTACAAGTCAGCGCTGACT
ACTATGGTAGTTAGTAGTCAGCGCTGACTTGTAGCGTAGTGGATATGCTG
TGCAGCTTAACAACTTGTGGTATCTACAGAGCACGGGGTTCGTAGCAACT
GCTGGCATTCATTCGTTCCCTGCGCTTCATTCGGGGGTGCTTGCCGTGAT
ATGCGTGTTTACTACATCTGGAGGAGATCACAAGCCACACGAAAGGAGGG
GATTTGTTTGTTCTTGAGTAACGCGAGCGAGAAATGTTGCGTGCTGTCCC
ACCAAGGTCATGAGACCGCGGGGCCCCCTTCCGCTCTAGAGATGAACATG
CCTGACCACGAATGTATCATGAGTGCAGGACAGTAGCATCAGCCGTCAGA
CAAGGTGTCAACATTGTACTACGTAGGTGGTCGGTTCCAAACGCTCCAGG
TTGCTGTGCTACTTGTCGTTGTCGCTGTTCTGGTTGTTCTGGTGGAATAC
TCTGTAGTTCGTAATTCTCCACGTGTTGTCTAGTGGGCGTTCCTCCTGTA
CCATCGCGCCACACGGTACGATGTGTTGTGTGTTTGTTGTTGTTGTCCTT
CTTTTGGTTGTGGTCGTGGCGTGTCAACCTGCGGCATTCTCCACATTCAA
CAGCCCTCACAGACCCAGATATGCGTATCCTGCCGACGACGTTCATGCCG
CACTTGCAACAACAGTTGGAGCAAGACCTGAAAGCGGGGGCCCTGAAGGG
AGGGCCCGAGGACTCGGTGGTAGTCTTGAGAGTTCTCGAGGTCTACCTCG
AGCCCATGCAGGAGGAGATGCTCAAGGTCGCGCCACTCATGCAGCTCGCT
GGGCGCGAGAGCAGGGAGCGAGTGAAGCTCTTGCCGCTGATCATGAAGGT
ACATGTTTATTGATTCTGTTTGCGGTTGCTTTGCACACATGTACTCCTCT
TCTCGTTGTCGGATCAAGGTTCAGGATTGTTTTGGCAGCGGAGATGCTCT
TTTGTCAGCCCCTGCCGTTTTTACCTCTGGGCCATAGCGTGCCTTATTGA
GCAATGACTTACCTCTTCTTTCAACCTTGCGCAACTGGCCATGAGTTAAT
CCGCGAGCTTTTCGTGCGCGCTATAGTATTCTAGTTGTTTTTTCGAAGGG
TTGGGAGAAACGCTGCACCATCACACAACACCGAAACACAACACTAAAGC
TTTTCCTGAGGCTTTTTTTTGTCTACTGTACCGCACTCGGGAAACAAAAT
TTTCACACCAAGATGGGTCGGCAGAACCACCTGAGAGTGTGTCCCTCGGT
CCTTGCGGTGTACTAATACTACTCATGCTACATGTCCCTGAAGATATCCC
TCGACTCTCCTTTTCTTCCCGTGCGCACGACCCACGACCGCGCGATAATC
TTGCCGCCATAGTGCCTGGGCTGCCACCACAGCACGACAGCAGAACGCCG
TCGTGAGAAGAGCTCAATCGCGGAATAACTGCGTTCTTTTCTAAGGCATT
CCTCGGAGATCTTGGAGATCTTGTAGTGTAAGAATTGGACCTGGTTCTAT
AAAACCAAGACACCTGATGAAACGACACCAAAACCGAAAACCCCACGATG
CAGGGGCACCTGTTGGAGCTGAAGGCGGCTTGCGGGACCAAAGACGCCAA
GGAGCAGCTTGAGGAGGTCCAAGAGGTATGCTGTAGTTGTTGGGTACGAA
ACGATACTTGCTGACTGTCGTCGTCTTGCCCTTCGAACGGTTCTGATCTT
CCTCCGTACCATCCGTGAAGGTATAGAGAATCGAATACGTCTGGTCACGG
CCCGGCGGAAGACTGCGTACAAGCGTGACATGGGTTGCGAAAAAAGCGCT
GTTTTCGGAGACTGCTGTCATTTTGTTTCTTCTTTCTAGCATGGCATAGC
AACTTTTCTTGACCCGGGAAGGGATTTCAATTGCTATTAGGTAATCGCAT
CCAATGTAACCGAAAACCCTTCTACACCTGCCGCCCCCTGTGGACAGGTG
AGGGAGACGCTGGACGAGTTCATCGCCTTGGCTAAGGTAAGCACTTATTC
GCTGTCGCGGTTTGGGTTGCACACAATCCTACGCCGAAATGGCAGTACGC
GCTACTTTTTCGCTGTCGCGGTTTGGGTTGCACACAATCCCACGCCGGAA
TGGCAGTACGCGCTAAGGCGGCAGGCGGGCGTTGGCCGCTTTTCCGCTCT
AGTCGTGCCCTTCGCCGTCAAGCTAAAGACCATCATCGTCCGCGGCGCAC
GTTGTTGCCTTCATCCCACTCATGGCATCAAATTGCCATGATACTGTACT
TCCAAGTGGTTTCTTCCCCCGAACATTACCACTTGGTCTCTTGCTGGGAC
AGACCCCGCTTGGCGCAAGGCGGAACGTTGTTGTGATGTCGGGCACGCTA
CTGTAGAAGTATGTGGTGGTGGGCATTTATCTCTGTTTGTCTGTGTTTTC
GCGGAAAGGAAAGGTACCTGGGGTAGGGCACCGACGGTGCAACGCACGGG
CTGCGCAAAGTCGAGGCCGTTGCCGTGTCGCGGAGCCAGGGCTTGAAGAA
ACGGGGCTGTTCTTGGACGCTTGTCGCAGGATTATTTGCTGTCTGTAGCA
ATATGCCATAACCTCAACATATTATCTGTGGTTCGGTGACGTCATAGCAG
TGGCCAGACCTCCGCGGAAGAACCTTGTTTCTAGGTACGCGCGGTGCCGA
GCAATTGGGCTTGTTCCGCAAACGTGACCAACCATATCATCCCACTTTCC
GCATGGTTTCATGCGTGCATACGCTGGCTTCTGTGGCGTGCTGATTCCAG
CAGATCTCAAGTGATTGTACGGCTGACAGACTATTCGTTTAGCTCACTCA
CAGGTTCAAAAGAAGTAGAAAACGTTTTCACGTCTGAGCAACGAAGAACA
GATGTCTTCGATTCTTAGGCTCCTGGCCTCCCAGCTGGAACAGTGATCTC
CGGAGGCGCACCCCTCGCCGTGCTGCTGGCCATTAATCAGTGGTGCCTCA
AAGGTGTTCCAGCTGGGAGTCGAACACGCGTCTACATGTGTTTTCTTCCC
CCTCATCCACGATGTCGTACCCGTGCTGCTGCTTCTGTTGCCACCGTCCC
CGTCCCGTCGTCTTCCAGACGCGGTACGAAATTGCACCCCTGGATCCGGA
AGGCGCGCCGGATGGTGACCAGCTTGGCATTTTCGGTTGCAGTTTTTATG
GCATGAAGGTGCGCGAAAACAGAAAACAAACGGCGTGTATGTAAAGAAAA
ATTATCAAAAATGTCACAGCGTGCTGTATGTAGCCTCACGCGTGTCCGTC
AGTTTGTTTGTTGCGTCTGGTACCAAGAGAACATTCTCCACGTTTCCATC
CTTGTCTCTGACATGAAACTCTACCGATGAGAGAAAGAACAAACTCTTCT
TGTATTGCTGGAGATCTCGTGCCAAGATGGGATTGACCCCGCCACGCCGT
GTCCCGCATTCCTTTGCATCCTCGCCTTCACACATTTCATGCCTTAACTT
CCTCTGCCCCGAAATCCCCGGGCCCTAAAAGCCGAACGAATCTGAAATGC
CTGGCCTCCGCCGTAGATGTCCACACATACACATCGCGTTTAGAAGCATT
TTCTGATTTCAGCCGCGTTGTGACTGACGTCTTTTCATTGGTCAGCCGGG
AGGCGTCGTCGATGCTCTAACCCCAACCGACACACACAGTTGCTACCGTT
TCTGTCTTAAATCCGGAGAATAGCTTATCCTCCCCCATGCCGCCCCCTCA
CGGGGTCCCAGGTAGTGACATTTAGACGTGGATTGTGTTTTCAAATGCAG
CGAGACTGACGTCTTTTCATTGGTCAGCCGGTTAGCGCGGTCGATGCTAA
TAATAAAGACACACACACACACATGCGGGTTCGATGTGCCTTCCTCCACC
AACTCCCTCCTCAGCCTTTCCCCCTCGTGGCCATGCCCCCGGCGTCGATG
TTTCCGCTCGCAGCGCACGGACGGCAGCAGCCGCTGCCAGCCGGACCCAT
GACGACGAAGAGACTGCTGAAGTTTTGCCCTGCCCGCCTGACGACTTCAT
TCTGCGTAACGAGGGAAACGAAGAGGAGACAGCTTTGTACACTAGTGCAG
CCCAAGACGCCTCCTTCTCTTGAGGAAAACTTCTTGTCTCGACAGCAGAG
CAAGGGTTGAGCAAGGATTTTGGAAATTGAACTTTGCGTCAAGAACGGAA
CCCGCCAAGAATCCAGGGTCCTCCCCCCACACACACATCACCCACACACA
CACCCTGTCGGTAGAACCCTTTTGAGTTGAAAGTGTTCGAGAGTGTTTTC
CCGCTACAATAATACAGACGTCCTTTCGTCGGTCGGCCGGTTGGCGCAGT
CCATGCTATGTTATGTTGTAGAAAGCACACACACACCGGAAACACACGCC
AAGCAAGTTCGTTGGTGTATGTAGAGGGCGGTGGATGGGTACGTAATTGT
TACCGTTATATTTTCGACAGTCGTGCATACGTGATTTACGTGGCACTCCC
AACGGGGAACCCGCGGACTAGAAGGAGCTTTCGGAGTGTCGCCCCTGGGA
AGATTGATTGACCTCCGTGTTTTTCGTGGATCCGTCGGTTAGCGACGACG
TTAATCATAGTTGCAGAGATAAAAACATCATGTCACAAAACCGGCGTTAG
TATCTCATGTTATTGTTTTTTCCAATTGCTCCATCACGCTCGAAATTCTG
TATTTTGTGTTTCCTCTTGCCATGGGCATGTTGGTGGTCAGTTGGTTGTG
GTTAAACTTGTTTGCGAGGTTTTCCACTTTCTCACGAAAATACTGGTGTT
TTTCTGTGTGGTTACCGCATCCGGATTTTCATGTAGGTCAGCACGCTCGA
AGCTCTGTTCGTCGTGTTCTTTCCTCTTGCCATGGGCATGTTGTTGACAG
GTTGTGGTGAAATTTGTTGGCGAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1592:10427..17600-

>mRNA_E-siliculosus-1a_F_contig1592.3404.1 ID=mRNA_E-siliculosus-1a_F_contig1592.3404.1|Name=mRNA_E-siliculosus-1a_F_contig1592.3404.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1572bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1592:10427..17600- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCCTGGAGATGGCGCAATGGATCAGCAGCTGTGGCTCTGCTGGTTGC
GGTTCTCCTGCCCCGGGGCCAGCCGTTCGCCAACAGTCCATGTTGTTCGT
TCCGCATCAGCAGCGGTAACCCTGCAACCAAGCGAGCATTGCCAAGATGT
CCTGGAGATGGCGCAATGGATCAGCAGCTGTGGCTCTGCTGGTTGCGGTT
CTCCTGCCCCGGGGCCAGCCGTTCGCCAACAGTCCATGTTGTTCGTTCCG
CATCAGCAGCGGTAACCCTGCAACCAAGCGAGCATTGCCAAGCAGGAACG
TCAACATGCGTGCAGAGGGGCCATCCGGCCAGATCGGCACCAGTAGGGCA
GCTTTTCTCAGGAGTGCGCTAGGCGGTGCTGCTGCGCTTGCCACGGTTGT
CGCCAGGCCAACGGAAACGCCCGCGTTCGCAGGAACGTCAACATGCGTGC
AGAGGGGCCATCCGGCCAGATCGGCACCAGTAGGGCAGCTTTTCTCAGGA
GTGCGCTAGGCGGTGCTGCTGCGCTTGCCACGGTTGTCGCCAGGCCAACG
GAAACGCCCGCGTTCGCGCTGCCCTTCGGGCCTAAAGACAACCCAGAACT
GGAGGAGGTGGTCAAGGTGGCCGGGTACTCTAGGTTCGTCAACAAGCGCT
GCCCTTCGGGCCTAAAGACAACCCAGAACTGGAGGAGGTGGTCAAGGTGG
CCGGGTACTCTAGGTTCGTCAACAAGTTGGAGCAAGACCTGAAAGCGGGG
GCCCTGAAGGGAGGGCCCGAGGACTCGGTGGTAGTCTTGAGAGTTCTCGA
GGTCTACCTCGAGCCCATGCAGGAGGAGATGCTCAAGGTCGCGCCACTCA
TGCAGCTCGCTGGGCGCGAGAGCAGGGAGCGAGTGAAGCTCTTGCCGCTG
ATCATGAAGTTGGAGCAAGACCTGAAAGCGGGGGCCCTGAAGGGAGGGCC
CGAGGACTCGGTGGTAGTCTTGAGAGTTCTCGAGGTCTACCTCGAGCCCA
TGCAGGAGGAGATGCTCAAGGTCGCGCCACTCATGCAGCTCGCTGGGCGC
GAGAGCAGGGAGCGAGTGAAGCTCTTGCCGCTGATCATGAAGGGGCACCT
GTTGGAGCTGAAGGCGGCTTGCGGGACCAAAGACGCCAAGGAGCAGCTTG
AGGAGGTCCAAGAGGGGCACCTGTTGGAGCTGAAGGCGGCTTGCGGGACC
AAAGACGCCAAGGAGCAGCTTGAGGAGGTCCAAGAGGTGAGGGAGACGCT
GGACGAGTTCATCGCCTTGGCTAAGGTGAGGGAGACGCTGGACGAGTTCA
TCGCCTTGGCTAAGACGCGGTACGAAATTGCACCCCTGGATCCGGAAGGC
GCGCCGGATGGTGACCAGCTTGGCATTTTCGGTTGCAGTTTTTATGGCAT
GAAGACGCGGTACGAAATTGCACCCCTGGATCCGGAAGGCGCGCCGGATG
GTGACCAGCTTGGCATTTTCGGTTGCAGTTTTTATGGCATGAAGCGCACG
GACGGCAGCAGCCGCTGCCAGCCGGACCCATGACGCACGGACGGCAGCAG
CCGCTGCCAGCCGGACCCATGA