mRNA_E-siliculosus-1a_F_contig15918.3401.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: A0A5S3PX65_9FLAO (Uncharacterized protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PX65_9FLAO) HSP 1 Score: 429 bits (1103), Expect = 2.500e-148 Identity = 206/235 (87.66%), Postives = 225/235 (95.74%), Query Frame = 1
Query: 1 LFSSNDTAAESAVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSLN 705
+F +ND+AAE+ VPT+STTGQGGSFARFKIV DYLYAVEPWSINVF+ISDLDNP+VL+EVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSG+YAFVTLR++NFCG ESGLYIVDV+DL NPTL KTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKT+++NLVQLNHFE+INTYDVIPL+NSLLMIG+KVLYQYEYL+NEIRLLS F LN
Sbjct: 199 VFLANDSAAETNVPTSSTTGQGGSFARFKIVSDYLYAVEPWSINVFDISDLDNPKVLEEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGDYAFVTLRSSNFCGDDIESGLYIVDVSDLTNPTLSKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTDINNLVQLNHFEDINTYDVIPLSNSLLMIGEKVLYQYEYLDNEIRLLSAFDLN 433
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: A0A7Y2GPE4_9FLAO (Uncharacterized protein n=1 Tax=Pricia sp. TaxID=2268138 RepID=A0A7Y2GPE4_9FLAO) HSP 1 Score: 353 bits (907), Expect = 1.290e-118 Identity = 175/233 (75.11%), Postives = 202/233 (86.70%), Query Frame = 1
Query: 4 FSSNDTAAESAVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSL 702
FS+N AE++ PT STTGQGGS ARFKIV DYLYA+E SI+VF+ISDL+NP++LD+VY G IETI+NQGDILFLGGTQGMYIYDISSP+KPT+VSEF HG ACDPVVV G+YAFVTLR N CG GTESGLYIVD+++L +P LKK YP+T PYGLG K+EKLFICDG DGLKVYDK+NVD+L LNHF++I TYDVIPL NSLLMIGDKVLYQYEYL+++IRLLS F L
Sbjct: 202 FSNN---AEASTPTRSTTGQGGSLARFKIVADYLYAIEWSSISVFDISDLENPKILDDVYTNGVIETIYNQGDILFLGGTQGMYIYDISSPEKPTFVSEFVHGTACDPVVVDGDYAFVTLRGENSCG-GTESGLYIVDISNLASPELKKFYPLTGPYGLGFKDEKLFICDGADGLKVYDKSNVDDLKLLNHFKDIITYDVIPLPNSLLMIGDKVLYQYEYLDDDIRLLSAFDL 430
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: UPI001269E763 (hypothetical protein n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI001269E763) HSP 1 Score: 345 bits (886), Expect = 1.840e-115 Identity = 170/226 (75.22%), Postives = 194/226 (85.84%), Query Frame = 1
Query: 28 ESAVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSLN 705
E+AVPT+S TGQGGS ARFKIV DYLYA+E +SINVF+IS+LD P++LDEVY G IETIFNQGDILFLGGTQGMYIYDI+SP+ P+YVSEF HG ACDPVVV G +A+VTLR N CG G ESGLYI+DVT+L +P L+K Y + EPYGLGIK+EKLFICDG GLKVYDK++VDNL LNHFE I TYDVIPL NSLLMIGD VLYQYEYLE++I+LLSTF LN
Sbjct: 205 EAAVPTSSDTGQGGSLARFKIVGDYLYAIESFSINVFDISNLDEPKILDEVYTNGVIETIFNQGDILFLGGTQGMYIYDITSPETPSYVSEFVHGTACDPVVVDGNFAYVTLRGGNACG-GIESGLYIIDVTNLADPKLRKFYGLKEPYGLGIKDEKLFICDGSAGLKVYDKSDVDNLRLLNHFENIITYDVIPLQNSLLMIGDNVLYQYEYLEDQIQLLSTFDLN 429
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: A0A371JPA2_9FLAO (Uncharacterized protein n=1 Tax=Muricauda nanhaiensis TaxID=2292706 RepID=A0A371JPA2_9FLAO) HSP 1 Score: 336 bits (861), Expect = 1.090e-111 Identity = 166/224 (74.11%), Postives = 186/224 (83.04%), Query Frame = 1
Query: 34 AVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSLN 705
A PT S TGQGGS ARF+IV DYLYAVE SINVF+ISDLD PEVLDEVY IETIFNQGD+LFLGGT+GMYIYDIS P KPT+VS+F HG ACDPVVV G+YA+VTLR N CG ESGLYIVD++D+ NP L YPM EPYGLGIKEEKLFICDG GLKV+DKT+V+NLV+LNHFE+I TYDVIP+ N L+M+GD VLYQYEYLENEI+LLS LN
Sbjct: 207 AAPT-SDTGQGGSLARFRIVGDYLYAVEWSSINVFDISDLDAPEVLDEVYTSWGIETIFNQGDLLFLGGTRGMYIYDISEPSKPTFVSDFEHGTACDPVVVDGDYAYVTLRGGNLCG-AVESGLYIVDISDIKNPELAIEYPMDEPYGLGIKEEKLFICDGASGLKVFDKTDVENLVELNHFEDIVTYDVIPMENHLIMVGDGVLYQYEYLENEIKLLSQIGLN 428
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: UPI001C07C5A2 (hypothetical protein n=1 Tax=Zobellia uliginosa TaxID=143224 RepID=UPI001C07C5A2) HSP 1 Score: 336 bits (861), Expect = 1.230e-111 Identity = 163/230 (70.87%), Postives = 195/230 (84.78%), Query Frame = 1
Query: 13 NDTAAESAVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSL 702
+++ AES PT+ TGQGGS ARFKIV DYLYAVE SI++F+I+DLDNP+VL++VYA G IETI+NQGD+LF+GGTQGMYIYDISSPDKP +VSEF HG ACDPVVV G+YAFVTLR N CG TESGLYIV+V++L NP L+K YP+ PYG+G K + LF+CDG GLKVYDKTNV++L +NHF++I TYDVIPL NSLLMIGDKVLYQY YL+N++RLLSTFSL
Sbjct: 203 SNSGAESTSPTSGDTGQGGSLARFKIVADYLYAVEWSSISIFDITDLDNPKVLEDVYANGTIETIYNQGDVLFVGGTQGMYIYDISSPDKPEFVSEFVHGTACDPVVVDGDYAFVTLRGENSCG-NTESGLYIVNVSNLTNPELEKFYPLEGPYGIGFKGDNLFVCDGDAGLKVYDKTNVNDLQLVNHFKDIITYDVIPLKNSLLMIGDKVLYQYLYLDNDLRLLSTFSL 431
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: UPI00188A048C (hypothetical protein n=2 Tax=Zobellia roscoffensis TaxID=2779508 RepID=UPI00188A048C) HSP 1 Score: 334 bits (857), Expect = 4.970e-111 Identity = 163/233 (69.96%), Postives = 196/233 (84.12%), Query Frame = 1
Query: 4 FSSNDTAAESAVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSL 702
F ++++AESA PT+ TGQGGS ARFKIV+DYLYAVE SI+VF+ISDLDNP+ L++VY G IETI+NQGDILF+GG QGMYIYDISSP+KP Y+SEF HG ACDPVVV G+YAFVTLR N CG TESGLYIVDV+DL NP L+K YP+ PYG+G K++ LF+CDG GLKVYDKT+V++L ++HF++I TYDVIPL SLLMIGDKVLYQY+YL N+IRLLS+FSL
Sbjct: 200 FDLSNSSAESASPTSGDTGQGGSLARFKIVQDYLYAVEWSSISVFDISDLDNPKTLEDVYVNGAIETIYNQGDILFIGGAQGMYIYDISSPEKPEYISEFVHGTACDPVVVDGDYAFVTLRGENSCG-STESGLYIVDVSDLVNPQLEKFYPLEGPYGIGFKDDNLFVCDGDAGLKVYDKTDVNDLKLVSHFKDIVTYDVIPLQESLLMIGDKVLYQYKYLNNDIRLLSSFSL 431
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: A0A3G2LA48_9FLAO (Uncharacterized protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A3G2LA48_9FLAO) HSP 1 Score: 333 bits (854), Expect = 1.330e-110 Identity = 159/219 (72.60%), Postives = 188/219 (85.84%), Query Frame = 1
Query: 49 STTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSLN 705
S+TGQGGS ARFKIV DYLYAVE SI++F+ISDLDNP+ LD+VY G +ETI+NQGDILFLGGTQGMYIYDI+SPDKP +VSEF HG ACDPVVV G+YA+VTLR N CG TESGLYIVD+T+L P L+K Y +T PYG+G K++KLF+CDG DGLKVYDK+N+ NL LNHF++I TYDVIPL NSLLMIG++VLYQYEYLEN+I LLS++SLN
Sbjct: 213 SSTGQGGSLARFKIVGDYLYAVEWGSISIFDISDLDNPKTLDDVYTNGAVETIYNQGDILFLGGTQGMYIYDITSPDKPVFVSEFIHGTACDPVVVDGDYAYVTLRGENSCG-NTESGLYIVDLTNLAEPKLEKFYSLTGPYGIGFKDDKLFVCDGADGLKVYDKSNIQNLTLLNHFKDIVTYDVIPLQNSLLMIGNQVLYQYEYLENDIELLSSYSLN 430
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: A0A844NBY6_9FLAO (Uncharacterized protein n=4 Tax=Zobellia TaxID=112040 RepID=A0A844NBY6_9FLAO) HSP 1 Score: 329 bits (844), Expect = 4.330e-109 Identity = 164/230 (71.30%), Postives = 193/230 (83.91%), Query Frame = 1
Query: 13 NDTAAESAVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSL 702
ND+AAES + TGQGGS ARFKIVEDYLYAVE SI+VF+ISDLDNP+ L++VY G IETI+NQGDILF+GGTQGMYIYDISSP+KP Y+SEF HG ACDPVVV G+YAFVTLR N CG GTESGLYIVDV++L NP L+K YP+ PYG+G K+ LF+CDG DGLKVYDKT+V++L ++HF++I TYDVIPL +SLLMIGDK LYQY+YL N+I LLSTFSL
Sbjct: 203 NDSAAESI--SGGDTGQGGSLARFKIVEDYLYAVEWSSISVFDISDLDNPKTLEDVYVNGAIETIYNQGDILFVGGTQGMYIYDISSPEKPEYISEFVHGTACDPVVVDGDYAFVTLRGENSCG-GTESGLYIVDVSNLVNPELEKFYPLKGPYGIGFKDNLLFVCDGDDGLKVYDKTDVNDLKLVSHFKDIITYDVIPLDDSLLMIGDKELYQYKYLNNDISLLSTFSL 429
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: A0A7X3D2L1_9FLAO (Uncharacterized protein n=2 Tax=Zobellia TaxID=112040 RepID=A0A7X3D2L1_9FLAO) HSP 1 Score: 326 bits (835), Expect = 1.030e-107 Identity = 158/230 (68.70%), Postives = 193/230 (83.91%), Query Frame = 1
Query: 13 NDTAAESAVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSL 702
+ ++AE++ PT+ TGQGGS ARFKIVEDYLYAVE SI+VF+ISDLDNP+ L++VY G IETI+NQGDILF+GGTQGMYIYDISSP+KP +VSEF HG ACDPVVV G+YAFVTLR N CG TESGLYIV+V++L +P L+K YP+ PYG+G K+ +LF+CDG DGLKV+DKT+V++L ++HF++I TYDVIPL SLLMIGDKVLYQY+YL N IRLLST L
Sbjct: 202 DSSSAEASSPTSGGTGQGGSLARFKIVEDYLYAVEWSSISVFDISDLDNPKTLEDVYVNGTIETIYNQGDILFIGGTQGMYIYDISSPEKPEFVSEFVHGTACDPVVVDGDYAFVTLRGENSCG-NTESGLYIVNVSNLASPELQKFYPLEGPYGIGFKDNRLFVCDGDDGLKVFDKTDVNDLKLVSHFKDIVTYDVIPLEESLLMIGDKVLYQYKYLNNSIRLLSTLDL 430
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Match: UPI000CD48F75 (hypothetical protein n=4 Tax=Arenibacter TaxID=178469 RepID=UPI000CD48F75) HSP 1 Score: 325 bits (832), Expect = 1.770e-107 Identity = 155/224 (69.20%), Postives = 187/224 (83.48%), Query Frame = 1
Query: 34 AVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDLDNPEVLDEVYAQGNIETIFNQGDILFLGGTQGMYIYDISSPDKPTYVSEFTHGRACDPVVVSGEYAFVTLRANNFCGYGTESGLYIVDVTDLNNPTLKKTYPMTEPYGLGIKEEKLFICDGPDGLKVYDKTNVDNLVQLNHFEEINTYDVIPLTNSLLMIGDKVLYQYEYLENEIRLLSTFSLN 705
A +S TGQGGS ARFKIV DYLYAV+ SINVFNI DL+NP+ L++VYA +IETIFN+GD LFLG +GMYIYDISSP PT +SEF HG ACDPVVV G+YA+VTLR N CG TESGL+IVD++D+ NP L KTYPM PYGLG+K EKLF+CDG GLKV+DKT+V NLVQLNHF++INT+DVIP+ ++LLMIG++V+YQYEYLEN+I+L+STF LN
Sbjct: 193 AAQNSSPTGQGGSLARFKIVNDYLYAVDSHSINVFNIQDLENPKDLEDVYAGFDIETIFNRGDQLFLGSMRGMYIYDISSPATPTLISEFQHGTACDPVVVDGDYAYVTLRGGNMCG-ATESGLFIVDISDMTNPELVKTYPMDGPYGLGVKGEKLFVCDGTSGLKVFDKTDVQNLVQLNHFKDINTFDVIPMEDNLLMIGEEVIYQYEYLENKIKLISTFKLN 415 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15918.3401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig15918.3401.1 >prot_E-siliculosus-1a_F_contig15918.3401.1 ID=prot_E-siliculosus-1a_F_contig15918.3401.1|Name=mRNA_E-siliculosus-1a_F_contig15918.3401.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=236bp LFSSNDTAAESAVPTASTTGQGGSFARFKIVEDYLYAVEPWSINVFNISDback to top mRNA from alignment at E-siliculosus-1a_F_contig15918:27..734+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig15918.3401.1 ID=mRNA_E-siliculosus-1a_F_contig15918.3401.1|Name=mRNA_E-siliculosus-1a_F_contig15918.3401.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=708bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15918:27..734+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15918:27..734+ >mRNA_E-siliculosus-1a_F_contig15918.3401.1 ID=mRNA_E-siliculosus-1a_F_contig15918.3401.1|Name=mRNA_E-siliculosus-1a_F_contig15918.3401.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1416bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15918:27..734+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |