mRNA_E-siliculosus-1a_F_contig1589.3386.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: A0A6H5KT75_9PHAE (PAO protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT75_9PHAE) HSP 1 Score: 365 bits (938), Expect = 2.560e-119 Identity = 179/186 (96.24%), Postives = 181/186 (97.31%), Query Frame = 1
Query: 442 MRTRRHGPAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIEATPSVSLFYGGERAGEAETAANDEAFCELMGRVRTMAQGCDDAEAPAGDAIEKLLLDEPFRSFSMPELARLRMRVLTLALWHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASPQV 999
MRTRRHG AGGGLCFDHGAAYIHGTLGNPLVDLAKGAGI LKQVSESNPWIEATPSVSLFYGG+RAGEAETAANDEAF ELMGRVRTMAQGCDDAEAPA DAIEKLLLDEPFRSFSMPELARLRMRVL LALWHGCDVQDMQLRSLEFE+KPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASPQV
Sbjct: 1 MRTRRHGTAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGIGLKQVSESNPWIEATPSVSLFYGGKRAGEAETAANDEAFSELMGRVRTMAQGCDDAEAPARDAIEKLLLDEPFRSFSMPELARLRMRVLMLALWHGCDVQDMQLRSLEFENKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASPQV 186
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: V9F1M3_PHYPR (Amine oxidase n=11 Tax=Phytophthora TaxID=4783 RepID=V9F1M3_PHYPR) HSP 1 Score: 113 bits (283), Expect = 1.710e-24 Identity = 83/243 (34.16%), Postives = 123/243 (50.62%), Query Frame = 1
Query: 292 TVEPSLPSFPKVVIVGAGMAGLSSTRELLRRG-WPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIE--ATPSVSLFYGGERAGEAETAANDEAFCELMGRVRTMAQ---GCDDAEAPAGDAIEKLLLDEPFRSFSMPE---LARLRMRVLTLALWHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
T E SL S +VV++GAG+AG+S+ +LL G + + +LEA SR GGR++ + A + + GAA+IHGT GNP LAK GIS K++S NPW+ + P+ LF G + E T E LM +++T+A+ G D E +E LL+ + M + R+ + + + W G D+ L D + GD PG HC+V G+ER E +A P
Sbjct: 8 TTETSLESSYRVVVIGAGLAGVSAANQLLSSGHFDSSDVCVLEAQSRIGGRVQAKSFSDALP-VNVEVGAAWIHGTEGNPFAALAKQFGISFKEISPRNPWLHPGSCPNFLLFNGSHQLSEQHTKDAWELQELLMYKLQTLARSDLGDDHREKTLSAVVEHLLVSDHELVEIMADGKTRDRIDLFLRLMEAWFGLTTDDLNLDVFVDTD--------LMGDDPGAHCIVPTGMERFIEHLAEP 241
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: A0A6A3ZL98_9STRA (Amino_oxidase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZL98_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.020e-23 Identity = 82/236 (34.75%), Postives = 121/236 (51.27%), Query Frame = 1
Query: 322 KVVIVGAGMAGLSSTRELLRRG-WPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCF--DHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIEAT--PSVSLFYGGERAGEAETAANDEAFC--ELMGRVRTMAQGCDDAEAPAGDAIEKLLLDEPFRSFSMPELA-----RLRMRVLTLALWHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
+VV+VGAGMAGL++ LL G + + + +LEA R GGR+ TR P L + GAA+IHGT GNP+ +LA+ GI LK++S NPW+ + P ++ G R E E DE + EL+ R +AE A D K LLDE + E + RL + + + W G ++MQ+ + G + GD PG HC+V GG+ + E +++P
Sbjct: 7 RVVVVGAGMAGLATANALLESGHFSVEDVCVLEAQDRIGGRIYTR---PFSDELPVKVEAGAAWIHGTEGNPVAELARKFGIELKEISARNPWLHPSSCPGFVVYDGSRRLSEVEV---DETWQWQELLLRKLQELALSGEAEGKALDTTVKQLLDEDSELCEIVESSTNGRERLALCLHLVETWMGSTSEEMQIDAF--------GEIDLMGDDPGAHCIVPGGMHSLIEHLSAP 228
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: A0A662WD54_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WD54_9STRA) HSP 1 Score: 106 bits (265), Expect = 4.300e-22 Identity = 77/234 (32.91%), Postives = 117/234 (50.00%), Query Frame = 1
Query: 322 KVVIVGAGMAGLSSTRELLRRG-WPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIE--ATPSVSLFYGGERAGE---AETAANDEAFCELMGRVRTMAQGCDDAEAPAGDAIEKLLLDEPFRSFSMPELARLRMRV-LTLAL---WHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
+VV+VGAG+AG+S+ LL G + + +LEA R GGR+ TR + D GAA+IHGT GNP ++LA+ GI +KQ+S NPW+ + P +F G + E AET A + + + T D A+E+L+ ++P + R R+ L L L W G + Q+ + G + GD PGPHC+V G+ER + +++P
Sbjct: 8 RVVVVGAGVAGVSAANALLASGQFDVHDVCVLEAQPRIGGRVHTRAISDE---VSLDVGAAWIHGTEGNPFIELARKFGIVVKQISARNPWLHPASCPGFLIFEGRRQLSEEEVAETWAWQDLLLRKLQVLATSESTATDHGKSLAVAVEQLVAEDPELQELVASAGNARERLDLCLRLVDTWMGATSDEQQVDAF--------GEIDLMGDDPGPHCIVPDGMERFIDHLSAP 230
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: G5AHC7_PHYSP (Amino_oxidase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AHC7_PHYSP) HSP 1 Score: 105 bits (262), Expect = 6.110e-22 Identity = 74/232 (31.90%), Postives = 121/232 (52.16%), Query Frame = 1
Query: 322 KVVIVGAGMAGLSSTRELLRRG-WPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIEAT--PSVSLFYGGERAGEAETAANDEAFCELMGRVRTMAQGCDDAEAPAGDAIEKLLLDEPFR-----SFSMPELARLRMRVLTLALWHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
+VV+VGAGMAG+++ LL G + + + +LEA R GGR+ TR A + + GAA+IHGT GNP+ +LA+ G+ LK++S NPW+ + P ++ G R E E + L+ +++ +A +AE A D K L+DE + S RL + + + W G ++MQ+ + G + GD PGPHC+V G+ + + +++P
Sbjct: 7 RVVVVGAGMAGVATANALLASGHFSAEDVCVLEARDRIGGRVYTRPFS-AELRVKVEAGAAWIHGTEGNPVAELAREFGVELKEISARNPWLHPSSCPGFEIYDGSRRLSEEEVGETWQWQELLLRKLQKLALS-GEAEGKALDVTVKQLIDEDAELREIITSSANAWERLNLCLHLVETWMGSTSEEMQVDAF--------GEIDLMGDDPGPHCIVPDGMHSLIKHLSAP 228
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: A0A225W7K5_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W7K5_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.210e-21 Identity = 80/239 (33.47%), Postives = 122/239 (51.05%), Query Frame = 1
Query: 304 SLPSFPKVVIVGAGMAGLSSTRELLRRG-WPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIE--ATPSVSLFYGGERAGEAETAANDEAFCELMGRVRTMAQG--CDDAEAPAGDAIEKLLLDEPFRSFSMPELARLRMRV-LTLAL---WHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
SL S +VV+VGAG+AG+ + ELL G + + +LEA SR GGR++T+ + + + GAA+IHGT GNP V LAK GI K++S NPW+ + P+ LF G + E +T + LM +++ +A+ C + A+ + LL + AR + ++ L L L W G +D+ L D + GD PG HC+V G+ER + +A P
Sbjct: 11 SLRSSYRVVVVGAGLAGVCAANELLSSGHFDSSDVCVLEAQSRIGGRVQTKSFSDSLP-VNVEVGAAWIHGTEGNPFVSLAKQFGIFFKEISPRNPWLHPGSCPNFLLFDGNHQMSEQQTKDAWKWQDLLMAKLQELARSDVCVEHREKTLSAVVEHLLASDQELVEVMGTARAQEKIDLFLRLMEAWFGLTTEDLNLDVFVETD--------LMGDDPGAHCIVPVGMERFIDHLAEP 240
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: A0A2P4YST5_9STRA (Lysine-specific histone demethylase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YST5_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.100e-20 Identity = 77/241 (31.95%), Postives = 117/241 (48.55%), Query Frame = 1
Query: 304 SLPSFPKVVIVGAGMAGLSSTRELLRRG-WPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCF--DHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIE--ATPSVSLFYGGERAGEA---ETAANDEAFCELMGRVRTMAQGCDDAEAPAGDAIEKLL-LDEPFRSFSMPELARLRMRVLT--LALWHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
+L S +V I+GAG+AG+S+ LL + + +LEA SR GGR++T+ P L + GAA+IHGT GNP D+A+ GISLK+V+ NPW+ + + F G E+ ET + + + T D + ++ L+ DE FR AR R+ V + +W G + ++QL D + GD PG HC+V GG+ER + + P
Sbjct: 8 ALESSYRVAIIGAGLAGVSTANALLSSNKFAASDICVLEAQSRIGGRIQTQ---PFSESLPVNVEVGAAWIHGTEGNPFSDMARKFGISLKEVAPRNPWLHPGSCNNFLFFDGREQLSHEQVDETWRWQDLLMHKLQALATSTNAIDHHQKALSTIVDHLVETDEEFREAMKTSNARARLDVCLKLIEVWMGVNDDEVQLDDFAEID--------LIGDDPGAHCIVPGGMERFVDHLVEP 237
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: A0A6A4F487_9STRA (Amine oxidase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F487_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.440e-20 Identity = 75/242 (30.99%), Postives = 124/242 (51.24%), Query Frame = 1
Query: 295 VEPSLPSFPKVVIVGAGMAGLSSTRELLRRG-WPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIE--ATPSVSLFYGGERAGEAETAANDEAFCELMGRVRTMAQ---GCDDAEAPAGDAIEKLLLDEPFRSFSMPEL---ARLRMRVLTLALWHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
+E L + +VV++GAG+AG+S+ ELL G + + +LEA +R GGR++T+ + + + GAA+IHGT GNP LAK GIS K++S NPW+ + + LF G + + +TA LM +++ +A+ G + + +E LL + M + A++ + + + W G V+D+ L D + GD PG HC+V G+ER + +A P
Sbjct: 9 IETPLEASYRVVVIGAGLAGVSAANELLSSGHFDTSDVCVLEAQTRIGGRVQTKSFSDSLP-VNVEVGAAWIHGTEGNPFAALAKQFGISFKEISPRNPWLHPGSCSNFLLFDGSRQLSDQQTAETWAWQDLLMRKLQQLARSDHGHEHRDKTLSAVVEHLLDSDRELLEVMGGVKARAKIELFLRLMEAWFGLTVEDLNLDVFVETD--------LMGDDPGAHCIVPPGMERFIDHLAEP 241
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: A0A225UUR8_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UUR8_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.460e-20 Identity = 80/248 (32.26%), Postives = 126/248 (50.81%), Query Frame = 1
Query: 289 MTVEP--SLPSFPKVVIVGAGMAGLSSTRELLR-RGWPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCF--DHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIEATP-SVSLFYGG-ERAGEA---ETAANDEAFCELMGRVRTMAQGCDDAEAPAGDAIEKLL-LDEPFRSFSMPELARLRMRVLT--LALWHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
MTV+ +L + +V I+GAG+AG+++ LL + +++ +LEA SR GGR+RT+ P LC + GAA+IHGT GNP ++A+ GI+LK+V+ NPW+ + S LF+ G E+ + ET + + + T D ++ L+ DE F+ AR R+ V + +W G + D+QL D + GD PG HC+V GG+ER + + P
Sbjct: 1 MTVKSGIALENSFRVAIIGAGLAGVTTANALLASHKFATNEICVLEAQSRVGGRIRTQ---PFSDSLCVNVEVGAAWIHGTEGNPFSEMARRFGIALKEVAPRNPWLHPSSCSNFLFFDGCEQLPQTQIDETWRWQDLLMHKLQALATSPTAADHQHKALSAIVDHLVNTDEEFQKVKTMPNARARLDVCLKLIEVWMGVNDDDVQLDDFVEID--------LIGDDPGTHCIVPGGMERFIDHLVEP 237
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Match: A0A6A3ME88_9STRA (Amine oxidase n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ME88_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.740e-20 Identity = 75/242 (30.99%), Postives = 123/242 (50.83%), Query Frame = 1
Query: 295 VEPSLPSFPKVVIVGAGMAGLSSTRELLRRG-WPKDKLVLLEASSRFGGRMRTRRHGPAGGGLCFDHGAAYIHGTLGNPLVDLAKGAGISLKQVSESNPWIE--ATPSVSLFYGGERAGEAETAANDEAFCELMGRVRTMAQ---GCDDAEAPAGDAIEKLLLDEPFRSFSMPEL---ARLRMRVLTLALWHGCDVQDMQLRSLEFEDKPFHGGQGVYGDFPGPHCVVEGGVERIAEVVASP 993
+E L + +VV++GAG+AG+S+ ELL G + + +LEA +R GGR++T+ + + + GAA+IHGT GNP LAK GIS K++S NPW+ + + LF G + +TA LM +++ +A+ G + + +E LL + M + A++ + + + W G V+D+ L D + GD PG HC+V G+ER + +A P
Sbjct: 9 IETPLEASYRVVVIGAGLAGVSAANELLSSGHFDTSDVCVLEAQTRIGGRVQTKSFSDSLP-VNVEVGAAWIHGTEGNPFAALAKQFGISFKEISPRNPWLHPGSCSNFLLFDGSRQLSNQQTAETWAWQDLLMRKLQQLARSDHGHEHRDKTLSAVVEHLLDSDRELLEVMGGVKARAKIELFLRLMEAWFGLTVEDLNLDVFVETD--------LMGDDPGAHCIVPAGMERFIDHLAEP 241 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1589.3386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1589.3386.1 >prot_E-siliculosus-1a_F_contig1589.3386.1 ID=prot_E-siliculosus-1a_F_contig1589.3386.1|Name=mRNA_E-siliculosus-1a_F_contig1589.3386.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=237bp MTVEPSLPSFPKVVIVGAGMAGLSSTRELLRRGWPKDKLVLLEASSRFGGback to top mRNA from alignment at E-siliculosus-1a_F_contig1589:22385..30117+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1589.3386.1 ID=mRNA_E-siliculosus-1a_F_contig1589.3386.1|Name=mRNA_E-siliculosus-1a_F_contig1589.3386.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7733bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1589:22385..30117+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1589:22385..30117+ >mRNA_E-siliculosus-1a_F_contig1589.3386.1 ID=mRNA_E-siliculosus-1a_F_contig1589.3386.1|Name=mRNA_E-siliculosus-1a_F_contig1589.3386.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1422bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1589:22385..30117+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |