mRNA_E-siliculosus-1a_F_contig15880.3381.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15880.3381.1
Unique NamemRNA_E-siliculosus-1a_F_contig15880.3381.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A0A5S3PI46_9FLAO (Translocation/assembly module TamB n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PI46_9FLAO)

HSP 1 Score: 521 bits (1342), Expect = 4.140e-171
Identity = 257/303 (84.82%), Postives = 282/303 (93.07%), Query Frame = 1
Query:    1 IDNIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            IDNIDNA Y+GF+SLIDFDLG     K LGKTT D NVEG+GFLQENLNTEVIGQ Y++D N Y Y+NIKVSG++KDQLFDG+L+ +D+NLKFNFKGLAEFGS +NN+NFIANVDYADLKKLNFINDS+S+FKGNVNMDI+GNTLDNI GDI+FTKTNFQNKNDTYYFEDFKVSSTF  DS RTIDINSTDIITGYLKGKFKVEELGRL+QNSLG+VYTNYRPFEIS GQTLAFNFKIYNKIVDVFFPE++FDPNTFI+GNIVADEGDFKL+FKSPSISAFGTEAD IE+KIDNKNPLFNTFV
Sbjct:  387 IDNIDNAEYEGFVSLIDFDLGGLTQRKSLGKTTFDFNVEGKGFLQENLNTEVIGQVYSVDFNGYTYENIKVSGIVKDQLFDGTLVANDENLKFNFKGLAEFGSGNNNYNFIANVDYADLKKLNFINDSVSIFKGNVNMDITGNTLDNIEGDIRFTKTNFQNKNDTYYFEDFKVSSTFEADSTRTIDINSTDIITGYLKGKFKVEELGRLVQNSLGTVYTNYRPFEISEGQTLAFNFKIYNKIVDVFFPEVKFDPNTFIKGNIVADEGDFKLNFKSPSISAFGTEADQIEMKIDNKNPLFNTFV 689          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A0A7X2ZUY9_9FLAO (Translocation/assembly module TamB n=15 Tax=Zobellia TaxID=112040 RepID=A0A7X2ZUY9_9FLAO)

HSP 1 Score: 497 bits (1279), Expect = 6.950e-162
Identity = 239/303 (78.88%), Postives = 278/303 (91.75%), Query Frame = 1
Query:    1 IDNIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            I+NIDNA YKGF+SLIDFDLG+F +NKRLGKTTLD NVEG+GF+QE LNTEVIG+ Y+++ N Y+Y ++KVSG+LK+QLFDG+LL +D+N+KFNFKGLA+FG   N+FNFIA+VDYADL KLNFI DSIS+FKGNVNMD++GNTLDN++GDIKFTKT FQNKNDTYYFEDFKVSSTF  D  R IDINS DIITGY+KG+FKV ELGRL+QNSLGS+YTNYRPF ISGGQTLAFNFKIYNKIVDVFFPE++FDPNTFI+GNIVADEGDFKL+FKSPSI AFG EADNI++KIDNKNPLFNT++
Sbjct:  391 INNIDNATYKGFVSLIDFDLGDFAENKRLGKTTLDFNVEGKGFVQETLNTEVIGEVYSVEFNNYEYNDLKVSGILKEQLFDGTLLSNDENIKFNFKGLADFGENRNDFNFIASVDYADLNKLNFIKDSISIFKGNVNMDVTGNTLDNLVGDIKFTKTIFQNKNDTYYFEDFKVSSTFETDGDRVIDINSPDIITGYMKGQFKVSELGRLVQNSLGSIYTNYRPFNISGGQTLAFNFKIYNKIVDVFFPEVKFDPNTFIKGNIVADEGDFKLTFKSPSIVAFGNEADNIDIKIDNKNPLFNTYI 693          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A0A524JRI2_9FLAO (Translocation/assembly module TamB (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A524JRI2_9FLAO)

HSP 1 Score: 492 bits (1267), Expect = 1.120e-161
Identity = 239/301 (79.40%), Postives = 275/301 (91.36%), Query Frame = 1
Query:    4 DNIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTF 906
            DNIDNA+YKGF+SLIDFDLG F DNKRLG TTLD NVEG+GF+Q++LNTEVIG+ YT D N Y Y+N+KVSG+LK+QLFDGSL  +D+NLKFNFKGLA+F +E NNFNFIA+VDYADLKKLNFI DS+SVFKGNVNM++SGNTLDNI+GDI FTKTN+QN ND YYF+DFKVSSTF  DSLR IDINS DIITGY++G FKV+ELG+L+QNSLGS+YTNYRPF+IS GQTLAFNFKIYNKIV VFFPEI+FDPNTFIRGNI+ADEGDFKL+FKSPSI A+GT+AD I++KIDNKNPLFNTF
Sbjct:  205 DNIDNAQYKGFVSLIDFDLGKFADNKRLGLTTLDFNVEGKGFVQKSLNTEVIGEVYTADFNNYVYKNLKVSGILKEQLFDGSLDCNDENLKFNFKGLADFSAERNNFNFIASVDYADLKKLNFIKDSVSVFKGNVNMNVSGNTLDNIVGDINFTKTNYQNINDVYYFDDFKVSSTFENDSLRVIDINSPDIITGYIRGNFKVKELGKLMQNSLGSIYTNYRPFKISDGQTLAFNFKIYNKIVGVFFPEIKFDPNTFIRGNIIADEGDFKLTFKSPSIEAYGTKADEIDIKIDNKNPLFNTF 505          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A0A3B0T2I3_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0T2I3_9ZZZZ)

HSP 1 Score: 495 bits (1275), Expect = 2.580e-161
Identity = 241/303 (79.54%), Postives = 280/303 (92.41%), Query Frame = 1
Query:    1 IDNIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            IDNIDNARYKGF+SLIDFDLG FV+ K LGKTTLD NVEG+GF++ENLNTE+IGQ Y+I+ N Y YQNIKVSG+LKDQLFDG+L+ +D+NLK +FKGLA+FG+  NNFNFIA+VDYADLKKLNFINDS+S+FKG VNM I+GN+LD+I+GDIKFTKT+FQNK+DTYYFEDFKVSS+F  DS+RTIDINSTDIITGYLKG FKV+ELG+L+QNSLG+VYTNYRPFEISG QTLAFNFKIYNKIVDVFFPE+ FDPNTFI+GNIVADEGDFKL+FKSP I A+G +AD IE+K+DNKNPLFNT+V
Sbjct:  387 IDNIDNARYKGFVSLIDFDLGGFVERKSLGKTTLDFNVEGKGFVKENLNTEIIGQIYSINFNGYDYQNIKVSGILKDQLFDGTLVSNDENLKVDFKGLADFGTAQNNFNFIASVDYADLKKLNFINDSVSIFKGKVNMVITGNSLDDIVGDIKFTKTSFQNKSDTYYFEDFKVSSSFENDSVRTIDINSTDIITGYLKGNFKVKELGKLVQNSLGTVYTNYRPFEISGEQTLAFNFKIYNKIVDVFFPEVSFDPNTFIKGNIVADEGDFKLNFKSPGIEAYGNKADRIEVKVDNKNPLFNTYV 689          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A4ASY3_MARSH (Uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) TaxID=313603 RepID=A4ASY3_MARSH)

HSP 1 Score: 493 bits (1269), Expect = 1.520e-160
Identity = 231/301 (76.74%), Postives = 279/301 (92.69%), Query Frame = 1
Query:    7 NIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            NID+A Y GF+SLIDFDLG+FVD K LGKTTLD NVEG+GF++ENLNTEVIG+ Y+++ N Y Y+N+KVSG+LK+QLFDGS+  +D+N+KFNFKGLA+FG + NNFNFIA VDYADLKKLNFINDS+S+FKGNVN+DISGN+LDNIIG++ FTKTNFQNKNDTYYFEDFK+SS+F  D++R+I+INS DIITGY+KG F+V+ELG+L+QNSLGS+YTNY+PFEISGGQTLAFNFKIYNKIVDVFFPE++FDPNTFIRGNI+AD GDFKL+FKSPSI A+G EADNI++KIDNKNPL+NT+V
Sbjct:  377 NIDDAEYNGFVSLIDFDLGSFVDEKSLGKTTLDFNVEGKGFVKENLNTEVIGEVYSVNFNNYNYKNLKVSGILKEQLFDGSIFSNDENIKFNFKGLADFGEDQNNFNFIAKVDYADLKKLNFINDSVSIFKGNVNIDISGNSLDNIIGEVNFTKTNFQNKNDTYYFEDFKISSSFDNDTIRSIEINSPDIITGYMKGDFRVKELGKLVQNSLGSIYTNYKPFEISGGQTLAFNFKIYNKIVDVFFPEVRFDPNTFIRGNIIADSGDFKLTFKSPSIEAYGNEADNIDVKIDNKNPLYNTYV 677          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A0A849F2F6_9FLAO (Translocation/assembly module TamB (Fragment) n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A849F2F6_9FLAO)

HSP 1 Score: 484 bits (1246), Expect = 2.610e-160
Identity = 232/301 (77.08%), Postives = 276/301 (91.69%), Query Frame = 1
Query:    7 NIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            NI+NA Y GF+SLIDFDLG FV+N +LGKTTLD NVEG+GF++E LNTEVIG  Y+I+ N Y+Y ++KVSG+LK+QLFDGS+L +D+NLKFNFKGLA+F S+ NNFNFIANVDYA+LKKLNFINDS+S+FKGNV++DISGN+LDNIIGD+ FTKT FQNKNDTYYF+DFKVSS+F  D++RTI+INS DIITGY+KG F+V ELGRL+QNSLGS+YTNY+PF+ISGGQTLAFNFKIYNKIVDVFFPE++FDPNTFIRGNI+AD GDFKL+FKSPSI A+  EADNI++KIDNKNPLFNTFV
Sbjct:  378 NIENAAYNGFVSLIDFDLGIFVENNKLGKTTLDFNVEGKGFVREKLNTEVIGAVYSINFNNYEYNDLKVSGILKEQLFDGSILSNDENLKFNFKGLADFASDENNFNFIANVDYANLKKLNFINDSVSIFKGNVSIDISGNSLDNIIGDVNFTKTIFQNKNDTYYFDDFKVSSSFENDTIRTIEINSPDIITGYMKGNFRVRELGRLVQNSLGSIYTNYKPFDISGGQTLAFNFKIYNKIVDVFFPEVKFDPNTFIRGNIIADSGDFKLTFKSPSIVAYDNEADNIDIKIDNKNPLFNTFV 678          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A0A316DZG7_9FLAO (Uncharacterized protein DUF490 n=4 Tax=Maribacter TaxID=252356 RepID=A0A316DZG7_9FLAO)

HSP 1 Score: 491 bits (1265), Expect = 7.440e-160
Identity = 233/301 (77.41%), Postives = 278/301 (92.36%), Query Frame = 1
Query:    7 NIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            NIDNA YKGF+SLIDFDLG+FVDN +LGKTTLD NVEG+GF+QE LNTEVIG+ Y+I  N Y Y+N+KVSG+LK+QLFDGS+  +D N+KFNFKGLA+FG + NNFNFIANV++ADLKKLNFINDS+S+FKG VN+DI+GN+LDNI+GD+ FTKT FQNKNDTYYF+DFKV+S+F  DS+RTIDINS DIITGYL+G F+V+ELG+LLQNSLGS+YTNY+PF+ISGGQTLAFNFKIYNKIVDVFFP+++FDPNTFI+GNI+ADEGDFKL+FKSPSI AFG EADNI++KIDNKNPLFNTF+
Sbjct:  391 NIDNAAYKGFVSLIDFDLGSFVDNDKLGKTTLDFNVEGKGFVQEKLNTEVIGEVYSIQFNNYDYKNLKVSGILKEQLFDGSIYSNDPNIKFNFKGLADFGEDRNNFNFIANVEHADLKKLNFINDSVSIFKGKVNIDITGNSLDNIVGDVNFTKTIFQNKNDTYYFDDFKVTSSFENDSIRTIDINSPDIITGYLRGNFRVKELGQLLQNSLGSIYTNYKPFDISGGQTLAFNFKIYNKIVDVFFPDVKFDPNTFIKGNIIADEGDFKLTFKSPSILAFGNEADNIDIKIDNKNPLFNTFI 691          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: UPI001EE78A7D (translocation/assembly module TamB n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI001EE78A7D)

HSP 1 Score: 491 bits (1264), Expect = 1.300e-159
Identity = 237/303 (78.22%), Postives = 279/303 (92.08%), Query Frame = 1
Query:    1 IDNIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            I+NID A YKGF+SLIDFDLG+F +NKRLGKTTLD NVEG+ FL ++LNTEVIG+ Y+I  N Y+Y N+KVSG+LK+QLFDGSL+ +D+NL+FNFKGLA+FG++ NNFNFIA VDYADLKKLNFINDS+S+FKGNVNMD+ GNTLDN+IGDIKFTKTNFQNKNDTYYFEDF++SS F  DS R I+INS DIITG+L+G FKV+ELGRL+QNSLGS+YTNYRPFEISGGQTLAFNFKIYNKIV VFFPE++FDPNTFIRGNI+ADEGDFKL+FKSPSI A+G++ADNI+++IDNKNPLFNTFV
Sbjct:  400 INNIDEAAYKGFVSLIDFDLGDFAENKRLGKTTLDFNVEGKSFLTKSLNTEVIGEVYSIVFNDYEYNNLKVSGILKEQLFDGSLVSNDENLQFNFKGLADFGADQNNFNFIAAVDYADLKKLNFINDSVSIFKGNVNMDVIGNTLDNLIGDIKFTKTNFQNKNDTYYFEDFEISSRFENDSTRVININSPDIITGFLRGNFKVKELGRLVQNSLGSIYTNYRPFEISGGQTLAFNFKIYNKIVGVFFPEVRFDPNTFIRGNIIADEGDFKLTFKSPSIEAYGSKADNIDVQIDNKNPLFNTFV 702          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A0A1M6IY39_9FLAO (Uncharacterized protein n=2 Tax=Pseudozobellia thermophila TaxID=192903 RepID=A0A1M6IY39_9FLAO)

HSP 1 Score: 489 bits (1259), Expect = 5.890e-159
Identity = 233/303 (76.90%), Postives = 281/303 (92.74%), Query Frame = 1
Query:    1 IDNIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            I+NIDNA Y+GF+SLIDFDLG+FV+NK+LGKT+LD NVEG+GF+QE LNTEVIG+ Y++  N Y+Y N+KVSG+LK+QLFDG+L+ +D+NLKFNFKGLA+FG   N+FNFIA+VDYADL+KLNFINDS+S+FKGNVNMD++GN+LDN++GDIKFTKT F+NKNDTYYFEDFKVSS+F  DS R IDINS DIITGY+KG FKV+ELG+L+QNSLGS+YTNYRPF+IS GQTLAFNFKIYNKIVDVFFPE++FDPNTFIRGNIV+DEGDFKL+FKSPSI AFG EAD+I++KIDNKNPLFNT++
Sbjct:  389 INNIDNATYEGFVSLIDFDLGDFVENKQLGKTSLDFNVEGEGFVQETLNTEVIGEVYSVTFNGYEYNNLKVSGILKEQLFDGTLVSNDENLKFNFKGLADFGENRNDFNFIASVDYADLRKLNFINDSVSIFKGNVNMDVTGNSLDNLVGDIKFTKTIFENKNDTYYFEDFKVSSSFENDSTRIIDINSPDIITGYMKGNFKVKELGKLVQNSLGSIYTNYRPFDISPGQTLAFNFKIYNKIVDVFFPEVKFDPNTFIRGNIVSDEGDFKLNFKSPSIVAFGNEADSIDVKIDNKNPLFNTYI 691          
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Match: A0A1G7FIB2_9FLAO (Uncharacterized protein n=2 Tax=Pricia antarctica TaxID=641691 RepID=A0A1G7FIB2_9FLAO)

HSP 1 Score: 489 bits (1258), Expect = 8.100e-159
Identity = 234/303 (77.23%), Postives = 282/303 (93.07%), Query Frame = 1
Query:    1 IDNIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNTEVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAEFGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIGDIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGKFKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEIQFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFNTFV 909
            +++I+NA YKGFISL+DFDLG+FVDNKRLGKTTLD+N+EG+GFLQ+ LNTEVIG+ YT++ N Y Y+NIKVSG+LKDQLFDGSL+VDD+N+KF+F GLA+FGS  N+FNF ANVDYADLK+L+FINDS+S+FKGNVNM+++GNTLD+++GDI FTKT F+NKN+ YYFEDFKVSS+F  DS+R IDINS DIITGYLKG FKV+ELG+LLQNSLGS+YTNYRPF+IS GQTLAFNFKIYNKIVDVFFPE++FDPNTFI+G+IVADEGDFKL+FKSPSI AFG EADNI+++IDNKNPLFNTF+
Sbjct:  388 VNDINNATYKGFISLMDFDLGDFVDNKRLGKTTLDVNIEGKGFLQKTLNTEVIGEVYTLNFNDYTYKNIKVSGILKDQLFDGSLVVDDENVKFDFNGLADFGSAQNDFNFNANVDYADLKRLHFINDSVSIFKGNVNMNVTGNTLDDLMGDISFTKTVFKNKNEVYYFEDFKVSSSFENDSIRIIDINSPDIITGYLKGNFKVKELGKLLQNSLGSIYTNYRPFKISSGQTLAFNFKIYNKIVDVFFPEVKFDPNTFIKGDIVADEGDFKLNFKSPSIEAFGNEADNIDIRIDNKNPLFNTFI 690          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15880.3381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S3PI46_9FLAO4.140e-17184.82Translocation/assembly module TamB n=1 Tax=Maribac... [more]
A0A7X2ZUY9_9FLAO6.950e-16278.88Translocation/assembly module TamB n=15 Tax=Zobell... [more]
A0A524JRI2_9FLAO1.120e-16179.40Translocation/assembly module TamB (Fragment) n=1 ... [more]
A0A3B0T2I3_9ZZZZ2.580e-16179.54Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A4ASY3_MARSH1.520e-16076.74Uncharacterized protein n=1 Tax=Maribacter sp. (st... [more]
A0A849F2F6_9FLAO2.610e-16077.08Translocation/assembly module TamB (Fragment) n=1 ... [more]
A0A316DZG7_9FLAO7.440e-16077.41Uncharacterized protein DUF490 n=4 Tax=Maribacter ... [more]
UPI001EE78A7D1.300e-15978.22translocation/assembly module TamB n=1 Tax=Pelagih... [more]
A0A1M6IY39_9FLAO5.890e-15976.90Uncharacterized protein n=2 Tax=Pseudozobellia the... [more]
A0A1G7FIB2_9FLAO8.100e-15977.23Uncharacterized protein n=2 Tax=Pricia antarctica ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15880contigE-siliculosus-1a_F_contig15880:2..910 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size909
Model size909
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
COG Functional cat.S
EggNOG OGs1HWKQ@117743,4NF7F@976,COG2911@1,COG2911@2
EggNOG free text desc.PFAM Family of
Seed eggNOG ortholog143224.JQMD01000002_gene1452
Seed ortholog evalue1.9e-140
Seed ortholog score505.4
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928101.8211026-CDS-E-siliculosus-1a_F_contig15880:1..9101622928101.8211026-CDS-E-siliculosus-1a_F_contig15880:1..910Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15880 2..910 +
1696318804.936575-CDS-E-siliculosus-1a_F_contig15880:1..9101696318804.936575-CDS-E-siliculosus-1a_F_contig15880:1..910Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15880 2..910 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15880.3381.1prot_E-siliculosus-1a_F_contig15880.3381.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15880 2..910 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15880.3381.1

>prot_E-siliculosus-1a_F_contig15880.3381.1 ID=prot_E-siliculosus-1a_F_contig15880.3381.1|Name=mRNA_E-siliculosus-1a_F_contig15880.3381.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=303bp
IDNIDNARYKGFISLIDFDLGNFVDNKRLGKTTLDLNVEGQGFLQENLNT
EVIGQNYTIDINTYKYQNIKVSGVLKDQLFDGSLLVDDQNLKFNFKGLAE
FGSESNNFNFIANVDYADLKKLNFINDSISVFKGNVNMDISGNTLDNIIG
DIKFTKTNFQNKNDTYYFEDFKVSSTFGKDSLRTIDINSTDIITGYLKGK
FKVEELGRLLQNSLGSVYTNYRPFEISGGQTLAFNFKIYNKIVDVFFPEI
QFDPNTFIRGNIVADEGDFKLSFKSPSISAFGTEADNIELKIDNKNPLFN
TFV
back to top

mRNA from alignment at E-siliculosus-1a_F_contig15880:2..910+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15880.3381.1 ID=mRNA_E-siliculosus-1a_F_contig15880.3381.1|Name=mRNA_E-siliculosus-1a_F_contig15880.3381.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=909bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15880:2..910+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATTGACAATATCGATAATGCTAGATATAAGGGTTTTATTTCCCTTATTGA TTTTGATTTAGGAAATTTTGTAGATAATAAAAGATTGGGAAAAACAACAC TCGATTTAAATGTAGAGGGTCAGGGTTTTCTTCAAGAAAACTTGAATACA GAGGTTATCGGACAGAATTACACCATAGATATCAACACATATAAATATCA AAACATCAAAGTGTCTGGTGTCTTGAAAGATCAGTTGTTTGATGGTTCCT TACTGGTGGATGACCAGAATTTAAAATTTAATTTTAAAGGATTGGCTGAG TTTGGTTCCGAGAGTAATAATTTCAACTTTATAGCCAATGTCGACTATGC AGATCTTAAAAAGCTAAACTTTATTAATGACAGTATTTCTGTTTTTAAAG GAAATGTTAACATGGATATTTCAGGAAATACGTTAGATAATATTATTGGT GATATTAAGTTTACTAAAACTAATTTTCAAAATAAAAATGACACCTATTA TTTTGAAGATTTTAAAGTGTCTTCAACATTTGGTAAAGATTCGTTAAGAA CGATAGATATTAATTCTACCGATATTATTACGGGATACTTAAAAGGAAAA TTTAAAGTTGAAGAATTGGGTAGATTGTTACAAAACTCATTAGGTTCGGT ATATACAAACTATCGCCCTTTTGAAATTTCAGGCGGACAAACACTTGCTT TCAATTTTAAAATCTACAATAAAATTGTAGATGTATTTTTTCCTGAAATT CAATTTGATCCGAATACGTTCATTCGTGGTAATATCGTTGCCGATGAGGG CGATTTTAAACTAAGTTTTAAATCACCGAGTATTTCAGCATTTGGCACCG AAGCGGACAATATTGAATTGAAAATTGATAATAAAAACCCATTATTCAAC ACATTCGTA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15880:2..910+

>mRNA_E-siliculosus-1a_F_contig15880.3381.1 ID=mRNA_E-siliculosus-1a_F_contig15880.3381.1|Name=mRNA_E-siliculosus-1a_F_contig15880.3381.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1818bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15880:2..910+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATTGACAATATCGATAATGCTAGATATAAGGGTTTTATTTCCCTTATTGA
TTTTGATTTAGGAAATTTTGTAGATAATAAAAGATTGGGAAAAACAACAC
TCGATTTAAATGTAGAGGGTCAGGGTTTTCTTCAAGAAAACTTGAATACA
GAGGTTATCGGACAGAATTACACCATAGATATCAACACATATAAATATCA
AAACATCAAAGTGTCTGGTGTCTTGAAAGATCAGTTGTTTGATGGTTCCT
TACTGGTGGATGACCAGAATTTAAAATTTAATTTTAAAGGATTGGCTGAG
TTTGGTTCCGAGAGTAATAATTTCAACTTTATAGCCAATGTCGACTATGC
AGATCTTAAAAAGCTAAACTTTATTAATGACAGTATTTCTGTTTTTAAAG
GAAATGTTAACATGGATATTTCAGGAAATACGTTAGATAATATTATTGGT
GATATTAAGTTTACTAAAACTAATTTTCAAAATAAAAATGACACCTATTA
TTTTGAAGATTTTAAAGTGTCTTCAACATTTGGTAAAGATTCGTTAAGAA
CGATAGATATTAATTCTACCGATATTATTACGGGATACTTAAAAGGAAAA
TTTAAAGTTGAAGAATTGGGTAGATTGTTACAAAACTCATTAGGTTCGGT
ATATACAAACTATCGCCCTTTTGAAATTTCAGGCGGACAAACACTTGCTT
TCAATTTTAAAATCTACAATAAAATTGTAGATGTATTTTTTCCTGAAATT
CAATTTGATCCGAATACGTTCATTCGTGGTAATATCGTTGCCGATGAGGG
CGATTTTAAACTAAGTTTTAAATCACCGAGTATTTCAGCATTTGGCACCG
AAGCGGACAATATTGAATTGAAAATTGATAATAAAAACCCATTATTCAAC
ACATTCGTAATTGACAATATCGATAATGCTAGATATAAGGGTTTTATTTC
CCTTATTGATTTTGATTTAGGAAATTTTGTAGATAATAAAAGATTGGGAA
AAACAACACTCGATTTAAATGTAGAGGGTCAGGGTTTTCTTCAAGAAAAC
TTGAATACAGAGGTTATCGGACAGAATTACACCATAGATATCAACACATA
TAAATATCAAAACATCAAAGTGTCTGGTGTCTTGAAAGATCAGTTGTTTG
ATGGTTCCTTACTGGTGGATGACCAGAATTTAAAATTTAATTTTAAAGGA
TTGGCTGAGTTTGGTTCCGAGAGTAATAATTTCAACTTTATAGCCAATGT
CGACTATGCAGATCTTAAAAAGCTAAACTTTATTAATGACAGTATTTCTG
TTTTTAAAGGAAATGTTAACATGGATATTTCAGGAAATACGTTAGATAAT
ATTATTGGTGATATTAAGTTTACTAAAACTAATTTTCAAAATAAAAATGA
CACCTATTATTTTGAAGATTTTAAAGTGTCTTCAACATTTGGTAAAGATT
CGTTAAGAACGATAGATATTAATTCTACCGATATTATTACGGGATACTTA
AAAGGAAAATTTAAAGTTGAAGAATTGGGTAGATTGTTACAAAACTCATT
AGGTTCGGTATATACAAACTATCGCCCTTTTGAAATTTCAGGCGGACAAA
CACTTGCTTTCAATTTTAAAATCTACAATAAAATTGTAGATGTATTTTTT
CCTGAAATTCAATTTGATCCGAATACGTTCATTCGTGGTAATATCGTTGC
CGATGAGGGCGATTTTAAACTAAGTTTTAAATCACCGAGTATTTCAGCAT
TTGGCACCGAAGCGGACAATATTGAATTGAAAATTGATAATAAAAACCCA
TTATTCAACACATTCGTA
back to top