mRNA_E-siliculosus-1a_F_contig1588.3380.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1588.3380.1
Unique NamemRNA_E-siliculosus-1a_F_contig1588.3380.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: D8LFW4_ECTSI (Uracil-DNA glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFW4_ECTSI)

HSP 1 Score: 503 bits (1294), Expect = 7.660e-176
Identity = 266/281 (94.66%), Postives = 269/281 (95.73%), Query Frame = 1 
Query:  193 MPGTNSSTGAINGSSKRASPDXXXXXXXXXXXXXXXGLGSGEQAVSKRPKISSSEGSPIKEEGWAMALSGETSKPYFGRLQAFLDKQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNVL 1035
            MPGTNSSTGA N         XXXXXXXXXXXXXX GLGSGE+AVSKRPKISSSEGSPIKE+GWA ALSGET+KPYFGRLQAFLDKQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNVL
Sbjct:    1 MPGTNSSTGA-NNXXXXXXXXXXXXXXXXXXXXXXGGLGSGERAVSKRPKISSSEGSPIKEDGWATALSGETTKPYFGRLQAFLDKQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNVL 280
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: A0A836CBN7_9STRA (Uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN7_9STRA)

HSP 1 Score: 295 bits (754), Expect = 7.530e-95
Identity = 139/224 (62.05%), Postives = 173/224 (77.23%), Query Frame = 1 
Query:  364 PIKEEGWAMALSGETSKPYFGRLQAFLDKQYAS-KVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 1032
            P+ +  W+ ALS E  KPYF +L AFL KQ A+ K IYPP+DK+F+A ++CPL  V+VVILGQDPYH PGQAHGL+FSV +GV QPPSLRN+VKEA +CCG  PTK+G L  W  QGVLLLNTVL+VE+    SH  +GWE+FTD VVR LN+ +R +VFLLWGKPSQ+KGA I+ ++HRVITC+HPSPL AT+  +PF GS CF +AND L + G   +DWN+
Sbjct:    2 PLTDPVWSQALSPEFGKPYFVKLLAFLAKQAAAGKAIYPPKDKVFHALNTCPLDRVRVVILGQDPYHGPGQAHGLSFSVAQGVAQPPSLRNIVKEATACCGTKPTKNGCLTPWAVQGVLLLNTVLTVEKGAPLSHHKKGWEQFTDEVVRLLNRQERTIVFLLWGKPSQQKGAHINRARHRVITCSHPSPLGATKTKEPFTGSRCFARANDMLVKSGQEPIDWNL 225
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: A0A7S2RYA9_9STRA (Uracil-DNA glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYA9_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.670e-84
Identity = 126/219 (57.53%), Postives = 160/219 (73.06%), Query Frame = 1 
Query:  382 WAMALSGETSKPYFGRLQAFLDKQYAS-KVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNVL 1035
            WA  +  E S+PYF  L  FL  + +  K ++PPR ++F+AF  C   NV+VVI+GQDPYH PGQAHGL+FSV  GV  PPSLRNM+KEA SC GI     GNL  W  QGVL+LN VL+VE  KANSH+ +GWE+FTDAV+R +NK +  +VFLLWGKP+Q+KG  I+ SKH VITC+HPSPL+A +  +PF+GS CF +AN+AL E+G   VDW +L
Sbjct:  111 WAAVVDKEFSRPYFVNLVKFLKSEASKGKRVFPPRPEIFSAFSHCDFDNVRVVIIGQDPYHGPGQAHGLSFSVKHGVAVPPSLRNMIKEAQSCEGIAKPNHGNLTHWAKQGVLMLNAVLTVEAHKANSHQKKGWEQFTDAVIRAVNKREAGVVFLLWGKPAQEKGRSINRSKHTVITCSHPSPLAAMKTSEPFLGSRCFSRANEALVEMGQSKVDWRIL 329
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: A0A6G0XWG6_9STRA (Uracil-DNA glycosylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWG6_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.110e-79
Identity = 125/223 (56.05%), Postives = 158/223 (70.85%), Query Frame = 1 
Query:  367 IKEEGWAMALSGETSKPYFGRLQAFLDKQYASKV-IYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 1032
            + E  W   L+ E  K YF +L+AFL ++   K  IYPP+  +F A + CP   +KVVI+GQDPYH PGQAHGL FSV +GV  PPSL+N+ KEA S  GI     G+L SWC+QGVLLLNTVL+V  S+ANSHK QGWE FTDAV+R +N+    +VFLLWGKP+Q KGALI  +KH +IT +HPSPL AT+  +PFIGS+CF +AN+ L + G   +DW V
Sbjct:   55 LTEPKWKDLLAPEFKKSYFKQLEAFLVREQKKKATIYPPKADIFAALNLCPFDGIKVVIIGQDPYHGPGQAHGLCFSVQRGVPPPPSLKNIYKEACSDVGIPKPSHGSLLSWCNQGVLLLNTVLTVRASEANSHKKQGWETFTDAVIRLVNEHATGVVFLLWGKPAQDKGALISRAKHCIITSSHPSPLGATKTNEPFIGSKCFSRANEYLTKSGKTPIDWTV 277
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: A0A2R5GJU8_9STRA (Uracil-DNA glycosylase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJU8_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.630e-79
Identity = 123/221 (55.66%), Postives = 158/221 (71.49%), Query Frame = 1 
Query:  373 EEGWAMALSGETSKPYFGRLQAFLDKQY-ASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 1032
            E GW   L  E  KPY+  L AFL ++  A K I+PP+  +F+A + CP   VKVVILGQDPYH PGQAHGLAFSV +G+  PPSLRNM KEA++   I+   +G+L  W  QGVLLLNTVL+V + +ANSHK++GWEKFTDA++R LNK    LVF+LWGK +QK  A +D SKH VIT +HPSPL A++  +PFIGS+CF +AN  LE+ G   ++W +
Sbjct:   73 EPGWQAQLGAEARKPYWRSLDAFLRQEAKAGKQIFPPKSMVFSALELCPFDKVKVVILGQDPYHGPGQAHGLAFSVQEGIAIPPSLRNMYKEAMTDVKISKPTTGSLVPWAKQGVLLLNTVLTVRKGEANSHKDRGWEKFTDAIIRSLNKNKNGLVFMLWGKHAQKVAAPVDRSKHLVITSSHPSPLGASKTKEPFIGSKCFSRANAYLEKKGKEPINWKI 293
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: A0A024T8C9_9STRA (Uracil-DNA glycosylase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8C9_9STRA)

HSP 1 Score: 256 bits (653), Expect = 6.880e-79
Identity = 122/223 (54.71%), Postives = 158/223 (70.85%), Query Frame = 1 
Query:  367 IKEEGWAMALSGETSKPYFGRLQAFLDKQYASKV-IYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 1032
            + E  W   L+ E    YF RL+ FL ++   K  I+PPR+++F A + CP   +KVVI+GQDPYH PGQAHGL FSV +GV  PPSL+N+ KEA S  GI   K G+L SWC+QGVL+LN VL+V  ++ANSHK QGWE FTDAV+R +N   + +VFLLWGKP+Q+KGALI  +KH V+T +HPSPL AT+  +PFIGS+CF KAN  L + G   +DW +
Sbjct:   58 LTEPKWTALLAPEFKMAYFRRLETFLAQEQKKKAAIFPPREEIFAALNLCPFDKIKVVIIGQDPYHGPGQAHGLCFSVARGVPPPPSLKNIYKEANSDIGIPIPKHGSLLSWCNQGVLMLNAVLTVRATEANSHKKQGWETFTDAVIRLINDQSQNVVFLLWGKPAQEKGALISRTKHCVLTSSHPSPLGATKTTEPFIGSKCFSKANAYLVQHGKDEIDWTL 280
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: A0A6V2UDE2_HETAK (Uracil-DNA glycosylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2UDE2_HETAK)

HSP 1 Score: 253 bits (645), Expect = 5.910e-77
Identity = 123/220 (55.91%), Postives = 157/220 (71.36%), Query Frame = 1 
Query:  382 WAMALSGETSKPYFGRLQAFLD-KQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKS--GNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 1032
            W   LS E SKPYF  L  F+  ++ + K+IYPP++ +F+A + CPL ++KVVI+GQDPYH P QAHG++FSV+ GV  PPSLRNM+KEAV    I P     G L +W  QGVLLLN VL+VE++ ANSH+ +GWE+FTDAV+RE+++     VFLLWGKP+Q K   ID  KHRVI  AHPSPLSAT+   PFIGS C+ +AN  L ELG   VDW++
Sbjct:  114 WHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 333
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: A0A1W0AAY8_9STRA (Uracil-DNA glycosylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAY8_9STRA)

HSP 1 Score: 250 bits (639), Expect = 6.860e-77
Identity = 120/223 (53.81%), Postives = 151/223 (67.71%), Query Frame = 1 
Query:  367 IKEEGWAMALSGETSKPYFGRLQAFLDKQYASKV-IYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 1032
            + E  W   L+ E  K YF  L  FL ++   K  IYPP+D++F A + CP   VKVVILGQDPYH PGQAHGL FSV K V  PPSLRN+ KEA+S   I     G L SWC QGVL+LNTVL+V  ++ NSHK QGWE FTD ++R++++    +VFLLWGKP+Q+K  LID SKH++ T +HPSPL AT+  +PFIGS CF K N+ L + G   +DW V
Sbjct:   50 LTEPKWREVLAQEFKKSYFKNLDTFLVQEQKKKAKIYPPKDEIFTALNLCPFDKVKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLRNIYKEAMSDVKIPKPSHGCLLSWCHQGVLMLNTVLTVRAAEPNSHKKQGWENFTDVIIRKISQDSEGVVFLLWGKPAQEKIPLIDRSKHKIFTSSHPSPLGATKTAEPFIGSRCFSKTNEYLVQQGKEPIDWTV 272
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BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: T0QHR0_SAPDV (Uracil-DNA glycosylase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QHR0_SAPDV)

HSP 1 Score: 251 bits (640), Expect = 7.610e-77
Identity = 121/226 (53.54%), Postives = 154/226 (68.14%), Query Frame = 1 
Query:  358 GSPIKEEGWAMALSGETSKPYFGRLQAFLDKQYASK-VIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 1032
            G  + E  W   L+ E  K YF  L AFL ++   K +I+PP+ ++F A + CP   +KVVILGQDPYH PGQAHGL FSV K V  PPSL+N+ KEA++   I     G L SWC QGVLLLNTVL+V  ++ANSHK QGWE FTD ++R+++K    +VFLLWGKP+Q+K ALID SKH ++T +HPSPL AT+  +PFIGS CF K N  L + G   +DW V
Sbjct:   61 GDLLTEPTWREMLAPEFKKSYFKSLDAFLVREQQKKAMIFPPKSEIFTALNLCPFDKIKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLKNIYKEAIADVNIPKPSHGCLLSWCDQGVLLLNTVLTVRATEANSHKKQGWETFTDVIMRKISKETSGVVFLLWGKPAQEKSALIDRSKHCILTSSHPSPLGATKTAEPFIGSRCFSKTNAYLVQQGKDPIDWTV 286
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Match: W4H8I4_9STRA (Uracil-DNA glycosylase n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8I4_9STRA)

HSP 1 Score: 248 bits (634), Expect = 4.230e-76
Identity = 123/237 (51.90%), Postives = 160/237 (67.51%), Query Frame = 1 
Query:  325 VSKRPKISSSEGSPIKEEGWAMALSGETSKPYFGRLQAFLDKQYASKV-IYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 1032
            VS     S++  + + E  W   L+ E  K YF +L+AFLD++   K  I+PPR ++F A + CP  ++ VVI+GQDPYH PGQAHGL FSV +GV  PPSL+N+ KEA    GI     G+L SWC QGVL+LN VL+V  ++ANSHK QGWE FTDAV+R +N     +VFLLWGKP+Q+KGALI  +KH V+T +HPSPL AT+  +PFIGS+CF KAN  L       +DW +
Sbjct:   40 VSSPESSSTTLSALVTEPTWNDLLAPEFKKAYFKQLEAFLDREQKKKAAIFPPRHEIFAALNLCPFDSINVVIIGQDPYHGPGQAHGLCFSVARGVPPPPSLKNIYKEANKDVGIPVPTHGSLLSWCRQGVLMLNAVLTVRATEANSHKKQGWETFTDAVIRLVNDQADHVVFLLWGKPAQEKGALISRTKHCVLTSSHPSPLGATKTAEPFIGSKCFSKANAYLASHNKPEIDWTL 276
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1588.3380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFW4_ECTSI7.660e-17694.66Uracil-DNA glycosylase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CBN7_9STRA7.530e-9562.05Uracil-DNA glycosylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2RYA9_9STRA1.670e-8457.53Uracil-DNA glycosylase n=1 Tax=Rhizochromulina mar... [more]
A0A6G0XWG6_9STRA1.110e-7956.05Uracil-DNA glycosylase n=1 Tax=Aphanomyces euteich... [more]
A0A2R5GJU8_9STRA2.630e-7955.66Uracil-DNA glycosylase n=1 Tax=Hondaea fermentalgi... [more]
A0A024T8C9_9STRA6.880e-7954.71Uracil-DNA glycosylase n=1 Tax=Aphanomyces invadan... [more]
A0A6V2UDE2_HETAK5.910e-7755.91Uracil-DNA glycosylase n=1 Tax=Heterosigma akashiw... [more]
A0A1W0AAY8_9STRA6.860e-7753.81Uracil-DNA glycosylase n=1 Tax=Thraustotheca clava... [more]
T0QHR0_SAPDV7.610e-7753.54Uracil-DNA glycosylase n=1 Tax=Saprolegnia diclina... [more]
W4H8I4_9STRA4.230e-7651.90Uracil-DNA glycosylase n=9 Tax=Aphanomyces astaci ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1588contigE-siliculosus-1a_F_contig1588:24465..28883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size933
Model size1404
Exons6
Ec32 orthologEc-05_005280.1
Ec32 ortholog descriptionUracil-DNA glycosylase-like
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko03036,ko03400
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.L
EC2.1.3.15,3.2.2.27,6.3.4.14,6.4.1.2
EggNOG OGsCOG0692@1,KOG2994@2759
EggNOG free text desc.base-excision repair, AP site formation via deaminated base removal
GOsGO:0000018,GO:0002200,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002562,GO:0002566,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002712,GO:0002714,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002889,GO:0002891,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0004844,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0006139,GO:0006220,GO:0006244,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006310,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009893,GO:0009987,GO:0010604,GO:0010941,GO:0016444,GO:0016445,GO:0016446,GO:0016447,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019104,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042981,GO:0043021,GO:0043024,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045008,GO:0045191,GO:0045830,GO:0045911,GO:0045935,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051052,GO:0051054,GO:0051094,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0051716,GO:0055086,GO:0060255,GO:0060548,GO:0065007,GO:0070013,GO:0071704,GO:0072527,GO:0072529,GO:0080090,GO:0090304,GO:0097159,GO:0097506,GO:0097510,GO:0140097,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:2000026
KEGG Pathwayko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko03410,ko04152,ko04910,ko04920,ko04922,ko04931,ko05340,map00061,map00254,map00620,map00640,map01100,map01110,map03410,map04152,map04910,map04920,map04922,map04931,map05340
KEGG ReactionR00742
KEGG koko:K01946,ko:K03648,ko:K11400
KEGG rclassRC00040,RC00367
Preferred nameUNG1
Seed eggNOG ortholog2880.D8LFW4
Seed ortholog evalue1.5e-140
Seed ortholog score505.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1588.3380.1prot_E-siliculosus-1a_F_contig1588.3380.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1588 24570..28517 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928101.6728706-UTR-E-siliculosus-1a_F_contig1588:24464..245691622928101.6728706-UTR-E-siliculosus-1a_F_contig1588:24464..24569Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1588 24465..24569 +
1696318804.8577702-UTR-E-siliculosus-1a_F_contig1588:24464..245691696318804.8577702-UTR-E-siliculosus-1a_F_contig1588:24464..24569Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1588 24465..24569 +
1622928101.774443-UTR-E-siliculosus-1a_F_contig1588:28517..288831622928101.774443-UTR-E-siliculosus-1a_F_contig1588:28517..28883Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1588 28518..28883 +
1696318804.9276774-UTR-E-siliculosus-1a_F_contig1588:28517..288831696318804.9276774-UTR-E-siliculosus-1a_F_contig1588:28517..28883Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1588 28518..28883 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928101.6883733-CDS-E-siliculosus-1a_F_contig1588:24569..248221622928101.6883733-CDS-E-siliculosus-1a_F_contig1588:24569..24822Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 24570..24822 +
1696318804.8732429-CDS-E-siliculosus-1a_F_contig1588:24569..248221696318804.8732429-CDS-E-siliculosus-1a_F_contig1588:24569..24822Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 24570..24822 +
1622928101.7043452-CDS-E-siliculosus-1a_F_contig1588:25814..259871622928101.7043452-CDS-E-siliculosus-1a_F_contig1588:25814..25987Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 25815..25987 +
1696318804.8824813-CDS-E-siliculosus-1a_F_contig1588:25814..259871696318804.8824813-CDS-E-siliculosus-1a_F_contig1588:25814..25987Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 25815..25987 +
1622928101.7207358-CDS-E-siliculosus-1a_F_contig1588:26561..266811622928101.7207358-CDS-E-siliculosus-1a_F_contig1588:26561..26681Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 26562..26681 +
1696318804.8928463-CDS-E-siliculosus-1a_F_contig1588:26561..266811696318804.8928463-CDS-E-siliculosus-1a_F_contig1588:26561..26681Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 26562..26681 +
1622928101.7349522-CDS-E-siliculosus-1a_F_contig1588:27029..271541622928101.7349522-CDS-E-siliculosus-1a_F_contig1588:27029..27154Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 27030..27154 +
1696318804.9008043-CDS-E-siliculosus-1a_F_contig1588:27029..271541696318804.9008043-CDS-E-siliculosus-1a_F_contig1588:27029..27154Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 27030..27154 +
1622928101.7461085-CDS-E-siliculosus-1a_F_contig1588:27482..275701622928101.7461085-CDS-E-siliculosus-1a_F_contig1588:27482..27570Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 27483..27570 +
1696318804.9091184-CDS-E-siliculosus-1a_F_contig1588:27482..275701696318804.9091184-CDS-E-siliculosus-1a_F_contig1588:27482..27570Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 27483..27570 +
1622928101.7586055-CDS-E-siliculosus-1a_F_contig1588:28343..285171622928101.7586055-CDS-E-siliculosus-1a_F_contig1588:28343..28517Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 28344..28517 +
1696318804.9193223-CDS-E-siliculosus-1a_F_contig1588:28343..285171696318804.9193223-CDS-E-siliculosus-1a_F_contig1588:28343..28517Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1588 28344..28517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1588.3380.1

>prot_E-siliculosus-1a_F_contig1588.3380.1 ID=prot_E-siliculosus-1a_F_contig1588.3380.1|Name=mRNA_E-siliculosus-1a_F_contig1588.3380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=311bp
MPGAQQRSMTSFFAPKASTAGTSSTKTTKMPGTNSSTGAINGSSKRASPD
SSSDAAAAGTAAAGGGLGSGEQAVSKRPKISSSEGSPIKEEGWAMALSGE
TSKPYFGRLQAFLDKQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDP
YHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCS
QGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGK
PSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEEL
GHGGVDWNVL*
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mRNA from alignment at E-siliculosus-1a_F_contig1588:24465..28883+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1588.3380.1 ID=mRNA_E-siliculosus-1a_F_contig1588.3380.1|Name=mRNA_E-siliculosus-1a_F_contig1588.3380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4419bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1588:24465..28883+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGAAAACATCGCGAATTCGCTGACAGAGGGAAGGGTGACAGAGACACGCC
TACCTACAGATTTGAAACTGCGAATTTGCTGCCTCGGCCGTTGTCGCTCT
CCATCATGCCTGGAGCACAACAGCGATCAATGACCAGCTTCTTCGCTCCT
AAAGCAAGTACAGCGGGGACATCATCGACGAAAACAACAAAGATGCCAGG
AACAAACAGCAGCACCGGCGCCATCAACGGCAGCTCGAAGCGCGCGTCGC
CAGACAGCAGCAGTGATGCTGCAGCAGCTGGAACAGCAGCAGCGGGGGGT
GGATTGGGGTCAGGCGAGCAGGCGGTATCCAAGCGGCCGAAGATCAGCAG
CAGCGAAGGTAGATGTGATGATGAGTCAAGGGAACGGCTCTCTTTTTGCT
GTCATGCGAGAGTTCGGCCGAGAGACGGCTTCGGAGAATTCCACGCATGG
CCATCATGTATACATATGCATACATAGGTCTCAGCACCGCCTTCGCTCCA
TCGCCTCGCATACGTTTTCGCTTTACTGTATGGTCGTGTGGGTGACTCTC
GTCCGAGGCTTGTATGGGCTCGCGAATCACAGAAGTTTTCAGTTTTCAGG
GTATGTAAGATACCGTCATGTGTGCCTATTCGAACCCGTGCTGTGGATGG
ATGTGACGGCGGGAGACCCAGCTCCCAAAAAGGCGACCACCCACCATACG
GAGGTGTAGTACTGTAGACCACGTCCACCACCGAGCAGTCGGAGACGACA
TTGAGGACGAGCAACCAGGATCGGCAACCTGTTGTTCTCAGCTGGTTATT
CTTCAAAATTGGTCGGATTGACAAGTTTGTTACACAAGCGACTATTGTAC
CCACCCCACGGCAGGCAAATTTGAAAATTCGCTGGCACCGATTCTCTCAA
CCGACACGCTGCTGCGCGTGCTCGAGAAGATTTTGGTTTACTGTATTACA
ATACATACTCCCCGTAATGCCTTAATGTATGGCTGAGGTCTTCGGCAGCA
TTGGAACCGATCTCCTGTGTGATAGGATAGACCAGGTTTAACTTTGGGGG
GGGGGGTGATATTCAACGTCATTGCGTCATGAATCGCGAGATCGCGAGGC
ACACAGCGGTTACGATACGAGTATCTAGAATTGATCACCACCAACAAATG
CACAAGTCGTCCCCGGCGTGGGGGCACCCATAAACAGCGTTTGCTGTATA
CCGAGCAACATGTCAATATTCCTCATGCCCGGCCCTACACCCCGTGTTGA
TTTTGAATGATACTGGTACAATAGCCTCCTACACACGAACGTTGTCGTAG
TCCTCCAGCTGTAAGGCCACAGCCGTTCTACCTTAACCTCGGACTTGCAG
GCTCGCCCATCAAGGAAGAAGGGTGGGCGATGGCGCTATCCGGGGAGACT
TCCAAGCCGTACTTCGGCCGTCTACAGGCGTTCCTGGATAAGCAGTACGC
CTCGAAGGTCATCTACCCGCCGAGGGACAAGCTGTTCAACGCCTTCGACT
CGTGCCCGCTGAGTAACGTCAAGGTGCGGGCCGGCCGCGTCTGTTCATCA
CGTTGTCGAGTCGAAGCATAAAGTTTGGGGACGGCGATTTTGGCAGTACA
TGATGACGTGCGTTGTTGTGTACGGCCCCAGTGCGCCGAGGCCGAGGTTC
AGTCCCGATCACAACGATTTTTTTCGGCGGGGGCCTGTGGACCATGCCGT
TTGAGATGCTGTTCGAGGGGATTATGGTTTTCTGCGTGTACATCAAGTGG
GCCTTTGAAATATGGTACGGAAAAGCCCCAGGAAGGCGAGAAAAAGTATA
CCAAAAGCAAGCGCTTGCGTGACTTGGCCGCATGGCGAGTGTTTAGATTT
TTCACCTGTGATTTGCCATCCTGTTGTCGCGAATTTTCGACTAACGTGTT
TTTGTGCAAGACACTTTTACCGCCGATGCTGCGTTCACCTACATACCGAC
CACATGACTCGACAGCACGTTTTGATTGTTTCGCGACTCATTGTTTTCAT
ATTTGGCTGTGTGATTCGCTCTGCCCGGTGCCGCTCTCTTGTTGTCCTTC
TTTTGACGGCGGGTGGCGATGGCGGTGGGGTGTGGGGGGGCACACAGGTG
GTAATCTTGGGGCAGGACCCTTACCACCAGCCCGGGCAGGCGCACGGCCT
GGCTTTCTCGGTGATGAAGGGGGTCATGCAACCGCCAAGCCTGCGGAACA
TGGTCAAGGAGGCCGTGGTGAGTAAACTAATAAAGTTGAAGTTGAAATAG
ATAGGGGCTTGGGTTGCGTCTGAATTCGACGTCCGTGCTATATGGTAGAG
TTGTTGCGTGTTTTCCAACGAACAGAACATGACACACGCCTGTTTTTGGA
CGATTTTGGAGAGGCTCCTGAAGTGGCGAGCTGCATCGCTGCCGACCGTG
TGGTTCCGCGCATGTGAGTGGAGCTGAAACGGAAGTCCGAGAGCCGGAAT
TTGTTGTTCTGAAGGTGGCTGTTCTTGATCGATGTTCCCTTTCTTCAGAC
AATCAATGTAAAACAGACACACCCACACCCTTCGATGCCGTTTTTTTTGT
GTGTTGTCCGCTTAGAGCTGCTGCGGCATCACGCCCACCAAGTCCGGGAA
CCTGGACAGCTGGTGCAGCCAGGGGGTCCTGCTGCTCAACACGGTTCTGA
GCGTCGAGAGGTCCAAGGCTAACTCGCACAAGAACCAAGGGTACGCTTGA
GGACCAACTGCGCGTTGCTTCGTGCAATCCTATTTTCTTCGACATCGTCC
GTGGCATTCGTGTTAGCGTCTTTGTCCTTGATGCGGTTGGCGAGGATGTT
CCCCGTCCATTTTCCCGGCCTCCTCTCAATTATCCTTCGTGCTCCCGCTA
CGAAATCGGGTCGATCGCTGGTTTGAGCGCCCCATGAGACAAGAAGCACC
ACGCTTGAAACAACCAGGTCCATTTGCACGAATTCCAAACCTTTTCTGTT
CGCTCTCGCTGCCTCGTCCTACACATTTACCTCCCCGATGGATTTGGGAT
ACATCTTGGACCCGCCAGGTGGGAAAAGTTTACGGACGCGGTGGTGCGGG
AGCTGAACAAGGGGGATCGGCGGTTGGTCTTCCTGCTGTGGGGAAAGCCT
TCCCAGGTGGGCGCTTGCTTCCGAAGCTGGGTCTTGCAGAAGTTGGTGCT
GTTCTTATTTGGTCTAAGAACCCGAAATTACCCCACTGACTAGTCTAATG
GCTTGATTTCGGCTTCTACATGTAGCGTTTTTTACACAAGCCCATCTCAG
CTTTCACCTAGTTTTTCGTTTGTGTTGAAGACCGGGATGGTGGTGCTTGT
TCTTCCGTCTTTTGGGGTCAACCTTCCTGGGTGCGACTCTGCTCCCTCAA
TGACCGAGAATACCTTTCTTTTTTTACCTGTAGGTCCGTGGCTGATAAAT
CGCTACTTAGTAGTTTGTTTGGTCTTTCGAAAGCCTCATTTATGGCGGCC
GTGTCGGCCGGTGTTAGTTTTTTTCGCTCGAAAGTACAGTGTCTTCCCCT
GTGCTCGTGCAGGGTTTAAACCCGGAGGTGTTGGAAGACCAGCCTGCCAA
TATTTGCAGAAAAGGCCGCCCTCCGGTGATCCCTTCCCCTCCCCCACTCA
ACACTGCACCGAGAAGAGTCGTCAGGAATGCCGCGGATCCAAATCACCTC
CACCCGCCTTTTCGGCTTCCGTGTTTTGTGTTTGCTGTCTTATCTGTCTG
CCTGTTTGTCTGCCTGATGTTGTATGTATGTCTGCCTTATCTGTCTGTCT
GCTTGTCTGCCTGCCTCCCTGTTCGTCTGTCTGCCTGTCATTCCTGTCTC
TACTTCTGTCCATCTTTGTCGTTCTGTCTGTGTTCCTGCTTTCTCTCGCT
GCCTCCCTTCCCCCCCCTGTCGATCGCAGAAAAAGGGTGCGCTGATAGAC
TCGTCCAAGCACCGCGTTATCACGTGCGCGCACCCTTCCCCCCTCTCGGC
CACGAGGAAGCCGGACCCGTTCATCGGATCGGAGTGCTTCAAGAAGGCCA
ACGATGCCCTCGAAGAGCTTGGACACGGCGGCGTGGACTGGAACGTGCTT
TGAAATGAATTGCCTGGCGGCGGCGGAATAACGCGGGGCTTGTGTACGTG
CATGTATGCACTGACGCACAACCAATCGCTGCTTGGAGTGTGTGTGTCCC
CTCAGACCACAGTTTTTGCGAGCGGCTAGTGTTTGAGTGAGGCGTGCCAG
CAGGCCGAGATTTGTGGGCCCGCGTTGTGTTAGACGCGGTACTTGAGAAA
TGTGCTTTGCTGTTGTGTGGTTTTTGCTGTGTTGGGTTGAGGTGAAGCTT
TCGTGTTGCTGCAAGCTTGGTACCAGGTATAAAATAGGGTATTTGATGTT
GGCCGTATTCATCCAGAAAGCCGTTACACTAGCGCTCGCGAAAAACTTGC
TCGGTACTTTCAATACCTC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1588:24465..28883+

>mRNA_E-siliculosus-1a_F_contig1588.3380.1 ID=mRNA_E-siliculosus-1a_F_contig1588.3380.1|Name=mRNA_E-siliculosus-1a_F_contig1588.3380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1866bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1588:24465..28883+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCTGGAGCACAACAGCGATCAATGACCAGCTTCTTCGCTCCTAAAGC
AAGTACAGCGGGGACATCATCGACGAAAACAACAAAGATGCCAGGAACAA
ACAGCAGCACCGGCGCCATCAACGGCAGCTCGAAGCGCGCGTCGCCAGAC
AGCAGCAGTGATGCTGCAGCAGCTGGAACAGCAGCAGCGGGGGGTGGATT
GGGGTCAGGCGAGCAGGCGGTATCCAAGCGGCCGAAGATCAGCAGCAGCG
AAGATGCCTGGAGCACAACAGCGATCAATGACCAGCTTCTTCGCTCCTAA
AGCAAGTACAGCGGGGACATCATCGACGAAAACAACAAAGATGCCAGGAA
CAAACAGCAGCACCGGCGCCATCAACGGCAGCTCGAAGCGCGCGTCGCCA
GACAGCAGCAGTGATGCTGCAGCAGCTGGAACAGCAGCAGCGGGGGGTGG
ATTGGGGTCAGGCGAGCAGGCGGTATCCAAGCGGCCGAAGATCAGCAGCA
GCGAAGGCTCGCCCATCAAGGAAGAAGGGTGGGCGATGGCGCTATCCGGG
GAGACTTCCAAGCCGTACTTCGGCCGTCTACAGGCGTTCCTGGATAAGCA
GTACGCCTCGAAGGTCATCTACCCGCCGAGGGACAAGCTGTTCAACGCCT
TCGACTCGTGCCCGCTGAGTAACGTCAAGGCTCGCCCATCAAGGAAGAAG
GGTGGGCGATGGCGCTATCCGGGGAGACTTCCAAGCCGTACTTCGGCCGT
CTACAGGCGTTCCTGGATAAGCAGTACGCCTCGAAGGTCATCTACCCGCC
GAGGGACAAGCTGTTCAACGCCTTCGACTCGTGCCCGCTGAGTAACGTCA
AGGTGGTAATCTTGGGGCAGGACCCTTACCACCAGCCCGGGCAGGCGCAC
GGCCTGGCTTTCTCGGTGATGAAGGGGGTCATGCAACCGCCAAGCCTGCG
GAACATGGTCAAGGAGGCCGTGGTGGTAATCTTGGGGCAGGACCCTTACC
ACCAGCCCGGGCAGGCGCACGGCCTGGCTTTCTCGGTGATGAAGGGGGTC
ATGCAACCGCCAAGCCTGCGGAACATGGTCAAGGAGGCCGTGAGCTGCTG
CGGCATCACGCCCACCAAGTCCGGGAACCTGGACAGCTGGTGCAGCCAGG
GGGTCCTGCTGCTCAACACGGTTCTGAGCGTCGAGAGGTCCAAGGCTAAC
TCGCACAAGAACCAAGGAGCTGCTGCGGCATCACGCCCACCAAGTCCGGG
AACCTGGACAGCTGGTGCAGCCAGGGGGTCCTGCTGCTCAACACGGTTCT
GAGCGTCGAGAGGTCCAAGGCTAACTCGCACAAGAACCAAGGGTGGGAAA
AGTTTACGGACGCGGTGGTGCGGGAGCTGAACAAGGGGGATCGGCGGTTG
GTCTTCCTGCTGTGGGGAAAGCCTTCCCAGGTGGGAAAAGTTTACGGACG
CGGTGGTGCGGGAGCTGAACAAGGGGGATCGGCGGTTGGTCTTCCTGCTG
TGGGGAAAGCCTTCCCAGAAAAAGGGTGCGCTGATAGACTCGTCCAAGCA
CCGCGTTATCACGTGCGCGCACCCTTCCCCCCTCTCGGCCACGAGGAAGC
CGGACCCGTTCATCGGATCGGAGTGCTTCAAGAAGGCCAACGATGCCCTC
GAAGAGCTTGGACACGGCGGCGTGGACTGGAACGTGCTTTGAAAAAAGGG
TGCGCTGATAGACTCGTCCAAGCACCGCGTTATCACGTGCGCGCACCCTT
CCCCCCTCTCGGCCACGAGGAAGCCGGACCCGTTCATCGGATCGGAGTGC
TTCAAGAAGGCCAACGATGCCCTCGAAGAGCTTGGACACGGCGGCGTGGA
CTGGAACGTGCTTTGA
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