mRNA_E-siliculosus-1a_F_contig1587.3376.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A6H5JKX1_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE) HSP 1 Score: 1478 bits (3827), Expect = 0.000e+0 Identity = 799/893 (89.47%), Postives = 813/893 (91.04%), Query Frame = 2
Query: 521 ENGQSSSKGNSQLRLLPGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSLVVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGSVTASADGDHIGDGGSSAA-------VVAGWAEVREKTRALLQGTPARGLDLGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFRFRSPGEAFRPSAVERAAAAQVLAGERSRFKRVVSKRLGPAGVSPDGXXXXXXXXXXXXXKGGEAEGEVLATDVGDGAVGARXXXXXXXXVDTQGRDERXXXXXEELRQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAXXXXXXXXXXYGDXXXXEEGGAGSALARAGLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWTSRRQPEDGGGEPGEEGGEVGRDEAGEEGGVIPWSAEALEAAAALRGERARRRANYGKRRPLEEVGAPAPFGRHYRHDFRAASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGPGGETQALEVASSRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEANRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLGGVGRGXXXXGVCVHAKRAPGSGGRGVAIRKGQALRVVIQKVEPQLKQVVATEFVDGMEGGAGRGGDRGADVVQAGDK 3178
EN QSSS GN+QLRLLPGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSL+VRTEAGEPLTIDAGQIVGVWREDEMSGHLPLG VTA ADGD GD SSAA VVAGWAEVREK RALLQG PARGLD+GAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPF+FRSPGEAFRPSAVERAAAAQVLAGERSRFKRVVSKRLGPAGVSPDG KGG AEGEVL DVGDGAVG R V+ Q RDER E+L QPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAA YGD EEGGAGSALARA LFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMV+ITGKAN TAAK ILVDVGLWTSRRQPE+GGG+PGEE GEVGRDEAGEEGGVIPWSAEALEAA AL GERARRR NYGKRRPLEEVGAPAPFGRH HDFR ASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPP ALKAMS SDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEA EKGETG+GRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKG GGETQALEVA+SRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETA+YLTWRQNKTRASRDEEA+RLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLGGVGRGXXXXGVCVHAKRAPGSGGRGVAIRKGQA+RVVIQKVEPQLKQVVATEFVDGMEGGAGRGG RGADV QAGDK
Sbjct: 4 ENDQSSSTGNNQLRLLPGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSLLVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGRVTAGADGDDGGDXXSSAAXXXXXAAVVAGWAEVREKIRALLQGMPARGLDVGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSPGEAFRPSAVERAAAAQVLAGERSRFKRVVSKRLGPAGVSPDGRGGRRKQRARGAGKGGGAEGEVLVADVGDGAVGVRGGGGRGGTVNAQCRDERKQEEEEDLSQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAAAGVAAG---YGDAAAAEEGGAGSALARARLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVDITGKANSTAAKCILVDVGLWTSRRQPEEGGGKPGEEVGEVGRDEAGEEGGVIPWSAEALEAATALGGERARRRVNYGKRRPLEEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPMALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEATEKGETGDGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETANYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLGGVGRGXXXXGVCVHAKRAPGSGGRGVAIRKGQAVRVVIQKVEPQLKQVVATEFVDGMEGGAGRGGGRGADVTQAGDK 893
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A835Z4W4_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W4_9STRA) HSP 1 Score: 296 bits (759), Expect = 1.590e-78 Identity = 256/757 (33.82%), Postives = 344/757 (45.44%), Query Frame = 2
Query: 842 WAEVREKTRALLQGTPARGLDLGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFRFRSP-GEA--------------FRPSAVERAAAAQVLAGERSRFKRV--VSKRLGPAGVSPDGXXXXXXXXXXXXXKGGEAEGEVLATDVGDGAVGARXXXXXXXXVDTQGRDERXXXXXEELRQPVLISVGGFKAVDQSVAVTREVADFCRVVGE---------------------------VKRAAXXXXXXXXXXYGDXXXXEEGGAGSALARAGLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWTSR-RQPEDGGGEPGEEGGEVGRDEAGEEGGV------IPWSAEALEAAAALRGERARRRANYGK---RRPLEEVGAPAPFGRHYRHDFRAASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGPGGETQALEVA-SSRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEANRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG 2947
W ++++ R LL P R LDL W+ A +GKG V++ A +LFG + + G + F+ S G A + PSA ER AA VLA + RFKRV V + P V + GGFK VDQSV T + F +V + V XXXXXXXXX XXXX A L + + I+HSLE A+GG L+P+AK + ++ + AA ++LV +G WT R R+P G +PWSAEAL AAA + R RR A Y + P +GAP P GR D+R A+F VYC+D F DDA S DP+ RE+ IH+ D Q LV G LD VA+ R ++YLP+GPLFMMPP AL+A++ S NEA+TV + +DP TG V SR+MLT LPP V LT + +LE T A A G + G ++ G +A+ ++ ++VD L ++T+ R+C AG AMP LVG + RV +GR+R+GT PLRRY+D+LAQRQ+ A+L L K+ + + + LT N A+R E +L EAL HC +ATGL +A VPARGTGRG EV ++GLG
Sbjct: 12 WPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGA-RRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPV---------------------------------------------------------------------VSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRR---DYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAG--APLMQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLG 693
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A4D9CV05_9STRA (RNB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV05_9STRA) HSP 1 Score: 233 bits (594), Expect = 5.400e-60 Identity = 161/459 (35.08%), Postives = 242/459 (52.72%), Query Frame = 2
Query: 1583 ILHSLEAFAIGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWTSRRQPEDGGGEPGEEGGEVGRDEAGEEGGVIPWSAEALEAAAALRGERARRRANYGKRRPLEEVGAPAPFGRHYRHDFRAASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGR-RSAEASGRRERGREGVKFRKGPGGETQALEVASSRQSL-VDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATG--RSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEANRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG 2947
+LH LE F++G + L +++V+ + A P AK +L+ G WT RR G PG E V + A + PW + LE A + RRRA K ++ P G H RHD+RA+ G Y +D G+ F DDA DPET EV IHI DVQ LV L+ +AR R + YLP GPL ++PP AL+A SLSD+ VNE VT + L P G V ++R++L+ +PP + +D+ + LL A+ + R + A+++ L + R A G+ + R+ GE +A+ + L VDE L +Y++ R K V +P G V+ G +R+GTGPLRRY D+LAQ+Q+ ++L+G L+K +++ + + W+ ++ R ++ LE+ A +C A+ +A G +AVV A TG G EV L G
Sbjct: 332 LLHHLEVFSLGAGVEGLSSTSQQVLKALGEPATPEGAKRVLLRAGYWTERR-----GAGPGREE-NVAAETAAAQRMAAPWPEDILELAKEALAKTERRRAALAK---VQRPNRPGRRGPHGRHDYRASGLGAYALDPPGSEFADDALGFDPETGEVLIHIADVQALVEGTPELEALARQRGEAIYLPDGPLHLLPPPALQAASLSDREVNECVTAAVTLGPD-GSVLNARLLLSLVPPITRIRYDEANELLSASSLEDLPTYRR-QAAQDLNVLLRASQARRALTKRSFSEGKRVSRVRRNTEGELEAIGFQRTPAHLMVDEFLALYSEAGRRFLKAHAVTLPLAPGS---VSGGLDAARFGTGPLRRYTDVLAQQQMVSVLKGRPPLSKSEVIRRMTQVNWQSKASQKLRSASRGKVLLESFATYCAAKAKAAGQAYAVVRATATGTGTEVMLPDAG 776
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A6U7IBS1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A6U7IBS1_9EUKA) HSP 1 Score: 143 bits (361), Expect = 4.430e-31 Identity = 237/951 (24.92%), Postives = 361/951 (37.96%), Query Frame = 2
Query: 557 LRLLPGTVILQPGDPIEFWHAQGLVLGNY-ESPVPGRQ-SLVVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGSVTASADGDHIGDGGSSAAVVAGWAEVREKTRALLQGTPARGLDLGAFWRA--ASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFRFRSPGEAFRPSAVERAAAAQVLAGERSRFKRVVSKRLGPAGVSPDGXXXXXXXXXXXXXKGGEAEGEVLATDVGDGAVGARXXXXXXXXVDTQGRDERXXXXXEELRQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAXXXXXXXXXXYGDXXXXEEGGAGSALARAG-----LFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVEITGK-----ANPTAAKSILVDVGLWTSRRQPEDGGGEPGEEGGEVGRDEAGEEGGVIPWSAEALEAAAALRGERARRRANYGKRR-----------------------------PLEEVGAPAPF-------GRHYRHDFRAASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVK---FRKGPGGETQALEVAS-----------------------SRQSLVDELLTVYTQEVYRLCKRAGVA-MPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEANRLSLEALAAHCLAQTRATGLEHAVV----------PARGTGRGR------------EVRLEGLGGVGRGXXXXGVCVHAKRAPGSGGRGVAIRKGQALRVVIQKVEPQLKQVVATEFVD 3112
+ + P + +L PG +E WH LV+GN+ ES V + +L+V G + +D GQ+V VW D M GH S WA ++ + ALL P LDL W+ A K + A+ LF + + G A +R AA Q+LA ER+ FKR+ P ++ G ++G+ G+G+ G ELR + GGF+ + +S A + +A+ + +R A E A L R G ++ PA L +L +E A+G + +A + + + G AN T A+ +L+DVG W + D G G+ + P+ EAL ++ RRRA P E G A H R D R+ Y ID T F DDA S D T + +HI D+ +VP GS LDDVAR+R + Y PL M+PP L+ LS K NE ++ I LD G V SR++ + +PP LT+++ DRLL T + V +E++A+ + RR A R +G+ G +GP T + +S ++VDE+L++++ KR + +P + + R T PLRRY D++AQRQ+ A+L GS + E A+ W + K ++ L AL +HC Q +G + AV+ P T RG E+RL GGV V R R +++G L+V ++ V+ + +V E +D
Sbjct: 39 MAVAPASGLLTPGSAVEVWHEGRLVVGNFRESMVRSKSCALIVELSCGRRIKVDGGQLVDVWPPDGM-GHSGPRSPND-------------------WAVLQRQCAALLAELPPHMLDLRPLWKRMLAEKGAKKLRIDSERVAQELFSSPHHS---------------GAAPEARLAQRLAAGQLLADERTLFKRL------PVQITASG-----------------SDGD----QSGEGSGGTC-----------------------ELRW----THGGFRVLPRSTASS--LAEVALIQAMKERLAVMRAGPVQL--------EHAPAAERLVRTGEGVGRVWPPATLPLLAEVELVALG------LSKASKQIERVLGAFSLLPANATGAQKLLLDVGQWVAGEA--DAEARLGYSSGQW----------IDPFPREALAEGESMATAVNRRRAELKLTPXXXXXXXXXXXXXXXXPASGSSWLSRLLLPPEVEGCVAGTDDESSLGSLHGRVDLRSRFPRAYAIDTDKTDFRDDAVSYDVITGTLSVHIADLTNVVPPGSLLDDVARLRLQTIYTGGMPLHMLPPPLLRYCCLSAKLPNECLSAVISLD-AFGRVRHSRLVRSVVPPVRTLTYEEVDRLL-------TDTSIDSEVHRELRAIASITRRRACNRHRVRQGKAGAAQTGAARGPRYATSSPATSSPASVRWRHVAADHSWRPEIVPQTEAHTVVDEVLSIFSYAARGAAKRHNLLRLPQMENR---------RIATAPLRRYADLIAQRQLCAVLCGSPGMPAS---EVAAIERWIRAKQSDMATQQPQPQMLRALESHCARQATVSGSDFAVLEGTVVKTGVAPEARTSRGNAPTKQPPSRVEVEIRLH-AGGV--------SAVATARTASQARRATRLQQGDVLQVRLRSVDTRRGRV-EVELID 842
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A482SRG6_9ARCH (RNB domain-containing ribonuclease n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRG6_9ARCH) HSP 1 Score: 132 bits (331), Expect = 1.890e-27 Identity = 131/485 (27.01%), Postives = 214/485 (44.12%), Query Frame = 2
Query: 1568 PAFLLILHSLEAFAIGGDEQSLIP--EAKRVMVEITGK-ANPTAAKSILVDV----GLWTSRRQPEDGGGEPGEEGGEVGRDEAGEEGGVIPWSAEALEAAAALRGERARRRA--------NYGKRRPLEEVGAPAPFGRHYRHDFRA--ASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEAAEKGETGE--GRLARVAKEIQALEYVGRRSAE-----ASGRRERGREGVKFRKGPGGETQALEVASSRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGR-SRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEANRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG 2947
P+ L L +LE +++ + S +P +A +++++ G+ A+P+ A+++LV++ G + R + G G+ GE R V W LEAA L ++A+RRA YGKR G R D RA AS V CID F DDA S+ PET E+ +H+ DV G + L A+ R +SEYLP G + M PP AL+A++ S K NEA+T ++D +G V RV + + P V DQ + ++EA G + K+++ L +G R + + + R + K G E +S +++ L++Y Y C + P +D V + R+ PLR +I QRQ+ A L L+ K+ + ++ ++ + ++L + ++ + R E G GRG VR+ G
Sbjct: 360 PSILRHLRALELYSM---QPSAVPPPQALKLILKRLGQDASPSGARALLVEMKHASGSYALRTGVDSGVMSSGDMQGESVRFH------VASWQPSVLEAATKLSEDQAKRRAAIQADAGRKYGKR------------GYQGRIDLRASSASHPVMCIDAKSATFFDDAISLCPETGELLVHVIDVTGALRAHPELQQTAKERISSEYLPNGAIHMFPPKALEALTFSSKEPNEAITAAFKIDYASGSVLDYRVFPSIIGPVVSFDIDQANTIIEAKSSGSKNQVWPVATEAVKDLELLHDIGSRIVKNNPWLIANVKNRMLLDSRVSKKTGVMKIGFEESSPAHHIINACLSLYANATYHFCSSNNLPTPVAFVNRDTVNSSVVRRFAAHPLRNWISQQQQRQLRAALGIDSALSSKECAHAVMHHNSKKKQSSQILRKGKSQLEFDHFESYYMNWKRTIPSEEPEFEVVGMGRGGLVRVSQFG 823
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A7S0ZJC8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJC8_9RHOD) HSP 1 Score: 112 bits (281), Expect = 3.100e-23 Identity = 87/273 (31.87%), Postives = 133/273 (48.72%), Query Frame = 2
Query: 1979 VYCIDGAGTRFLDDAFSVDPETRE-------VFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGPGGETQALEVA-SSRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYL 2773
V+CID A F DDA S E E V +HI DV + S LD +A+ RA S YLP GPL M+PP ++A+S + + +EAVTV + +DP++G V + LT LPPA LTF Q + + ++ L + + AL GR G+R + R + G + + S +DE+L + + R K V +P G Q R GT P+R+Y+D+ QRQI +I++G +++++ +L
Sbjct: 66 VFCIDDAVANFRDDAISCS-EIEEFGKRFLVVSVHIADVDESIEPDSDLDAIAKDRAQSIYLPAGPLHMLPPVLMEALSFNAEYASEAVTVRMLIDPESGQVEHYSIKLTYLPPATILTFQQASQAAKRTKE-------LNLMLEAGDALSRYGR------GKRNKNRSDYMSVRATGAQVVVEKYEFSDIHKAMDEILNLAGNCIRRFAKSKKVFLPERRGSQFFAL----RCGTAPMRKYMDLAVQRQIKSIIKGQSVGTQEEMVALNKWL 320
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A2V3J848_9FLOR (DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J848_9FLOR) HSP 1 Score: 116 bits (290), Expect = 1.510e-22 Identity = 114/386 (29.53%), Postives = 174/386 (45.08%), Query Frame = 2
Query: 1868 RARRRANYGKRRPLEEVGAPAPFGRHYRHDFRAASFGVYCIDGAGTRFLDDAFSVDP----ETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRS----AEASGRRERGREG----------------VKFRKGPGGETQALEVASSRQ----------------SLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEANRLSLEALAAHCLAQTRATGLEHAVVPAR 2905
RARR A P ++ A R A VYCID +RFLDD+FSV+ + F+HITDV V +GS +D +AR R S YLP PL M+PP A+ A S S EA+T+ I LD + ++ + +PP + + ++Q D ++ KG+ L+R +E+ L+ + + + A+ RR R RE V+ +K G + ASS + ++VD +LT + + K VA+P VA R GT PLRRY D++ QRQI +L ++ + E ++L R ++ + + E+L+ HC Q ATG +A+V R
Sbjct: 384 RARRSALQATENPRQKDSA-----RRLLRSSNGAVLRVYCIDDRNSRFLDDSFSVEQLEGSKRVRFFLHITDVDEYVKSGSAIDAIARERGQSLYLPLKPLHMLPPPAMDAASFSTSLPVEAITIMIDLDLDKNELHKWQLFPSVVPPVIRINYEQFDNII----KGDAKAIGLSR--EELADLQLIAKMASRLPAKLDTRRLRRREHTPHSSLENPIHLEANRVEAKKVAGVRLVKRQSASSSKPAKVARVIDFQSTGAHAIVDNILTSCGALIRQFAKENRVALPEGRDASTYVA----RCGTAPLRRYGDLVVQRQIKCVLFRKQPDGRRRMNELRNWLARRHSEGQKMVSQHRKSALFESLSIHCAQQCAATGNAYAMVRGR 754
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A7S2DFQ6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFQ6_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.780e-21 Identity = 119/371 (32.08%), Postives = 170/371 (45.82%), Query Frame = 2
Query: 1979 VYCIDGAGTRFLDDAFSVDPETREVFIHITD-VQGLVPTGSTLDDVARMRAASEYLPQG-PLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTG-----------------GVASSRVMLTTLPPAVPLTFDQTDRLLE-----AAEKGETGE--GRLARVAKEIQ----ALEYVGRRSAEASGRRERGREGVKFRKGPGGETQALEVASSRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSG-----YLNKKDLMETASYLTWRQ---NKTRASRDEEANRLS-LEALAAHCLAQTRAT-------GLEHAVVPARGTGRGREVRLEGLGGV 2953
V ID R DDA S D + + +HI+ + G +P S L+ +A+ +A + YLP L + P L A SLS + VN VT+ LD T V + + P LTF Q +R+L AA E + GR R+ +++ L Y RR G+E +K K QA+ +S S+VD +L++Y++E Y LCKR GV+ P + G G RY T PLRRY D+LAQRQ+ +++ S L+ + + E S R+ K RA E +R + + LAAHC AQTRA G +V A TG +EV L+ GG+
Sbjct: 76 VVSIDQGSLR--DDAMSWDEASSTLSVHISAALPGALPMDSLLEVLAKQKAEAYYLPGSVTLQLFPNEVLNAGSLSSRDVNHCVTMRAVLDRTTTPQSTXXXXXXXXXXQSFSVREVTFSESLIGPVKTLTFTQANRILSSKVSPAATSLEDDDVTGRAHRMVHDLERVVTTLRYDNRR----------GQEPLKRTK------QAIASSSRAHSIVDTVLSMYSKEAYLLCKRKGVSTPRMPG-------GVVRYSTAPLRRYADLLAQRQLLSLVGASDTSDVEVLDAETVREAMSIAVRRRAQYTKFRAGEAESRSRAAAIHDLAAHCAAQTRAHEAAGATGGTVPVLVTAEATGNAQEVILKDFGGL 421
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: A0A7S1TNE9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNE9_9RHOD) HSP 1 Score: 107 bits (266), Expect = 9.060e-20 Identity = 92/326 (28.22%), Postives = 148/326 (45.40%), Query Frame = 2
Query: 1985 CIDGAGTRFLDDAFSV-------DPETRE--VFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSLSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEAA------------EKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGPGGETQALEVA-SSRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEANRLSLEALAAHCLAQTRATGLEHAVV 2896
C+D G F DDA S +R+ V +H+ DV +V GS LDD AR RA S YLP GPL M+PP ++A+S S+ ++AV++ + + +G + ++ + +PP V TFD + A + G+ LA + + A+ S GRR+R R + G + A S+ +DE+L + R + V +P G + R GT PLR+Y+D++ QRQI AIL+ ++D++ +L R +T+ L +L++H Q+R L A +
Sbjct: 338 CVDDVGANFRDDAVSCYELPSGDGHASRQIVVVVHVADVSAVVCEGSALDDAARNRAQSIYLPTGPLHMLPPVLMEAVSFSETAPSDAVSIAMTICTDSGELVRYKIARSLVPPVVCYTFDAAKEAISAMGSNNGHPKAVMRHRDSRGDAALALLVEAASAM------SRADGGRRKRDRSDFVSVRLKGDRVTVQQYAFSTIHEAMDEVLNSAGSCLRRYARHHKVYLPERRGSEFFAM----RCGTAPLRKYMDLVVQRQIKAILQYERPAKREDMVALNKWLESRLVETKKLVQAHREDALLASLSSHVSTQSRLADLGRAAL 653
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Match: K0S3P0_THAOC (RNB domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3P0_THAOC) HSP 1 Score: 100 bits (250), Expect = 8.110e-18 Identity = 120/425 (28.24%), Postives = 177/425 (41.65%), Query Frame = 2
Query: 1583 ILHSLEAFAIG---------GDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWTSRRQPEDGGGEPGEEGGEVGRDEAGEEGGVIPWSAEALEAAAAL-RGERARRRANYGKRRPLEEVGAPAPFGRHYRHDFRAASFGVYCIDGAGTRFLDDAFSVDPETR------------EVFIHITDV-------QGLVPTG--STLDDVARMRAASEY-LPQGPLFMMPPTALKAMSLS--DKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEA-AEKGET------GEGRLARVAKEIQALEYVGRRSAEASGRRE-----RGREGVKFRKGPGGETQALEVASSRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAIL 2719
I+H LE A+G GD + L + + ++ + + A+S L++VG W++ V D G V PWSA+ LEA+ +L + E RR + ++ P + F +S CID T F DDA + + EV IHI DV +GL+P+ + L A R S Y LP GPL ++PP ALKA+SL + N VT+ +D + G + + + T + LTF LL+ +K L+R ++ L R+ + ++E GR+G G GG Q S LVD L +Y + L +RA +P G + R GT PLRRYID +AQRQ A+L
Sbjct: 363 IIHRLECLAMGDAWRRSDNQGDRKDLEVDVRETLIGLGLPLSSEGARSALIEVGRWSN-----------------VSEDNLGVV--VEPWSADTLEASRSLVKAEEKRRTLLLNTCKSIKTKPRKKPLAQ-LEDRFDLSSLPCVCIDAKRTSFRDDAIGIRLRSSTGRKVSKAASKWEVLIHIADVSDIYLKGEGLLPSHDIALLRHAAEQRGMSRYDLPLGPLHLLPPVALKALSLKTDEDSCNRCVTLWAYIDERDGKLLEAGLERTLIASPTALTFADATSLLDCDTDKSNVKAVLSVAHRNLSRWSRRHANLNEAARKREDRLSQKELISNATGRDGRDD--GVGGSFQR----SRGHRLVDSSLDLYAFALGTLMRRANQPIPRAPGSMENRG---GRLGTAPLRRYIDGMAQRQAIAVL 758 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1587.3376.1 >prot_E-siliculosus-1a_F_contig1587.3376.1 ID=prot_E-siliculosus-1a_F_contig1587.3376.1|Name=mRNA_E-siliculosus-1a_F_contig1587.3376.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1025bp MRFPQKRTCRKSSCAAVAALAAIVLVNLSVLSEACFPPSAVVAGATAGAAback to top mRNA from alignment at E-siliculosus-1a_F_contig1587:16157..25601+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1587.3376.1 ID=mRNA_E-siliculosus-1a_F_contig1587.3376.1|Name=mRNA_E-siliculosus-1a_F_contig1587.3376.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9445bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1587:16157..25601+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1587:16157..25601+ >mRNA_E-siliculosus-1a_F_contig1587.3376.1 ID=mRNA_E-siliculosus-1a_F_contig1587.3376.1|Name=mRNA_E-siliculosus-1a_F_contig1587.3376.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6150bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1587:16157..25601+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |