mRNA_E-siliculosus-1a_F_contig1587.3375.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1587.3375.1
Unique NamemRNA_E-siliculosus-1a_F_contig1587.3375.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: D8LHL7_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL7_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 5.310e-129
Identity = 195/201 (97.01%), Postives = 198/201 (98.51%), Query Frame = 1 
Query:   85 MYPVAAFVHPFAGRTMDGLASPHGSSSSGYRAQRLAAYSTTAPCSKGSVTARHRSVRRTTRTTTMGFKSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAGCALKK 687
            M+PVAAFVHP+A RTMDGLASPHGSSSSGYRAQRLAAYS + PCSKGSVTARHRSVRRTTRTTTMGFKSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAGCALKK
Sbjct:    1 MFPVAAFVHPYAARTMDGLASPHGSSSSGYRAQRLAAYSNSPPCSKGSVTARHRSVRRTTRTTTMGFKSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAGCALKK 201
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A835YLP8_9STRA (Selenoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.520e-37
Identity = 74/133 (55.64%), Postives = 98/133 (73.68%), Query Frame = 1 
Query:  289 SPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQD-GNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAGCALK 684
            SP +  K+ IAK G G Y++  V   ++ Y +  NKV+VFSWT CPFCKKAK  + +L+ +P+ Y+ VELD+  + G A R+ELS+ TGRTSVPQIWI GEF+GGCNDGPG+ TL  +G+LVPML+ AGC +K
Sbjct:   57 SPFNQFKKFIAKAGTGEYNEAEVAGKINSYIA-DNKVMVFSWTNCPFCKKAKAQLAELM-EPSQYKVVELDQDAELGKAYRFELSKITGRTSVPQIWIKGEFIGGCNDGPGLLTLQKQGKLVPMLKKAGCKVK 187
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A8J9RIT3_9CHLO (Probable Glutaredoxin at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RIT3_9CHLO)

HSP 1 Score: 136 bits (343), Expect = 2.970e-33
Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = 1 
Query:  289 SPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAG 672
            SP + +K+ IA   AG YD+ A+   VD Y    N VVVFSWTRCPFC KAK  ++ L    A Y  VELD   DGNAIR EL+++T RTS+P +WI GE +GGCNDGPG+ TL   GELVPML+ AG
Sbjct:   67 SPANAVKKAIAAAQAGQYDEAAIGGKVDAYIK-DNPVVVFSWTRCPFCIKAKRELDSL---NAKYLAVELDTMADGNAIRSELAKRTNRTSMPNVWINGEGIGGCNDGPGLMTLQRNGELVPMLKRAG 190
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A2P6TGA2_CHLSO (Glyoxalase domain-containing 4 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGA2_CHLSO)

HSP 1 Score: 133 bits (334), Expect = 2.860e-32
Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 1 
Query:  295 VDVLKQG---IAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAG 672
            +D   QG    A   AG YD+ A    ++ Y +  N VVVFSW+ CPFCK+AK +++   A  A Y  +ELD+  DG A+R EL++KTGR+SVP IWI G+ VGGCNDGPGV TL DKGELVPML++AG
Sbjct:   47 LDFFNQGKVQAAVAAAGQYDEAATKAAIEKYIA-DNPVVVFSWSGCPFCKRAKAVLD---ATGAKYTALELDQMADGKALRAELAKKTGRSSVPNIWIAGQNVGGCNDGPGVATLQDKGELVPMLKAAG 171
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A7S2V0C9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0C9_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.130e-30
Identity = 73/129 (56.59%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:  292 PVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKG-LIEDLLADPADYEFVELDERQD-GNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAG 672
            PV   KQ IA   AG YDK  +   +D     +N VV+FSWT CPFCKKAK  LIED+    A  + VELDE    GNAIR EL ++TGRTSVP IW+G E+VGGCNDGPGVF L  +G+L P+L S+G
Sbjct:   30 PVAFFKQSIADAVAGDYDKVEINNEIDKAIE-NNSVVIFSWTTCPFCKKAKQFLIEDI---GATVKVVELDEDPKIGNAIRAELGKRTGRTSVPSIWVGKEYVGGCNDGPGVFPLEAQGKLRPLLNSSG 154
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A383W3I8_TETOB (Glutaredoxin domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W3I8_TETOB)

HSP 1 Score: 128 bits (322), Expect = 1.820e-30
Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 1 
Query:  289 SPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDER-QDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAG 672
            SP++  K+ +AK  AG YD+ AV   ++G     NKV+VFSW+ CPFCK AK L+ D+    AD+  +ELD   Q+G  IR EL+  T RTSVP IWI G+ VGGCNDGPGV TL  +GELVPML++AG
Sbjct:   60 SPINEGKKALAKAQAGDYDEKAVRGKIEGLIK-DNKVMVFSWSGCPFCKNAKALLSDV---GADFTALELDTLGQEGKQIRAELAAMTERTSVPNIWIAGKNVGGCNDGPGVMTLHKQGELVPMLKAAG 184
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A061R5D6_9CHLO (Glutaredoxin-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5D6_9CHLO)

HSP 1 Score: 123 bits (308), Expect = 3.130e-28
Identity = 70/133 (52.63%), Postives = 92/133 (69.17%), Query Frame = 1 
Query:  289 SPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDER-QDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAGCALK 684
            SP++  K  +AK+ AG YDK AV   V+   S S KVVVFS++ CPFC KAK L++D+    A+YE VEL++  ++G AIR EL++ TGRTS+P IWI GE +GGCNDGPG+ +L   G L+P LE AG   K
Sbjct:   86 SPLNKGKIELAKLQAGDYDKTAVRAKVENXIS-SEKVVVFSFSTCPFCVKAKELLQDV---GAEYEAVELNDMGKEGYAIRAELAELTGRTSMPNIWIAGEGIGGCNDGPGIMSLHRXGLLLPKLEKAGALSK 214
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A2V0PHJ4_9CHLO (Glutaredoxin domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHJ4_9CHLO)

HSP 1 Score: 121 bits (303), Expect = 6.140e-28
Identity = 64/130 (49.23%), Postives = 91/130 (70.00%), Query Frame = 1 
Query:  286 KSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDER-QDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAG 672
            +SP++  K+ +AK+ AG YD+ AV   ++G  +G+  VV+FS++ CPFC +AK L+ +L    A YE +EL+E  +DG  +R EL+Q T RTS+P IWI G FVGGCNDGPG+  L  +G+LVP+L  AG
Sbjct:   56 ESPLNKGKKALAKLQAGDYDEAAVRAKLEGILTGT-PVVMFSFSTCPFCNRAKALLNEL---GASYEAIELNEMGKDGMQLRAELAQMTDRTSMPSIWIQGSFVGGCNDGPGIMPLHKQGKLVPLLREAG 181
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A2P6V558_9CHLO (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V558_9CHLO)

HSP 1 Score: 127 bits (318), Expect = 9.570e-27
Identity = 76/168 (45.24%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:  289 SPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAGCALKKL*QSHRG*TRCLVEAAANTKSQKQRCFTKQAAGHT 792
            SP++  K  +A   AG YD  A   ++D      N  VVFSW+ CPFCK AK +++   A  A Y  +ELD+R DG AIR EL++ TGR+SVP IWIG E VGGCNDGPGV TL ++G+LVPML++AG AL+           C+  ++   K  K   + + A+G T
Sbjct:   22 SPLNQGKVALAVSQAGDYDAAATKAMID-QAIADNGCVVFSWSGCPFCKNAKAVLD---ATGAKYVALELDQRPDGKAIRAELAKMTGRSSVPNIWIGKENVGGCNDGPGVATLKNEGKLVPMLQAAG-ALEFYGD-------CVASSSGAYKYFKDNVWQESASGKT 177
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BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Match: A0A8J6CFT7_DIALT (Glutaredoxin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFT7_DIALT)

HSP 1 Score: 117 bits (293), Expect = 1.440e-26
Identity = 72/138 (52.17%), Postives = 95/138 (68.84%), Query Frame = 1 
Query:  286 KSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQ--DGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGP--GVFTLMDKGELVPMLESAGCALKK 687
            +SPV   K G+AK+ AG YD+ A    VD   + SN V +FS+T CPFC KA+ L++++    A Y+ V+LD+     G A+R  L+++TGRTSVP I+IGG+FVGGCNDG   GV TL  KGEL PMLE+AG ALK+
Sbjct:   53 ESPVSKFKVGLAKLQAGSYDEGATRARVDELIA-SNAVTMFSFTTCPFCIKAQQLLDEM---GATYKVVQLDQNAFTGGYAMRAVLAERTGRTSVPAIFIGGQFVGGCNDGGLGGVVTLDKKGELRPMLEAAG-ALKR 185
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1587.3375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHL7_ECTSI5.310e-12997.01Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835YLP8_9STRA1.520e-3755.64Selenoprotein n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A8J9RIT3_9CHLO2.970e-3356.25Probable Glutaredoxin at C-terminar half n=1 Tax=C... [more]
A0A2P6TGA2_CHLSO2.860e-3254.26Glyoxalase domain-containing 4 n=1 Tax=Chlorella s... [more]
A0A7S2V0C9_9STRA1.130e-3056.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A383W3I8_TETOB1.820e-3054.26Glutaredoxin domain-containing protein n=1 Tax=Tet... [more]
A0A061R5D6_9CHLO3.130e-2852.63Glutaredoxin-like protein n=1 Tax=Tetraselmis sp. ... [more]
A0A2V0PHJ4_9CHLO6.140e-2849.23Glutaredoxin domain-containing protein n=1 Tax=Rap... [more]
A0A2P6V558_9CHLO9.570e-2745.24NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
A0A8J6CFT7_DIALT1.440e-2652.17Glutaredoxin domain-containing protein n=1 Tax=Dia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1587contigE-siliculosus-1a_F_contig1587:8530..16033 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size654
Model size2198
Exons5
Hectar predicted targeting categorychloroplast
BRITEko00000,ko03110
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EggNOG OGsCOG0695@1,KOG1752@2759
EggNOG free text desc.protein disulfide oxidoreductase activity
GOsGO:0000302,GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0006091,GO:0006139,GO:0006259,GO:0006355,GO:0006518,GO:0006575,GO:0006725,GO:0006749,GO:0006790,GO:0006807,GO:0006915,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008219,GO:0008794,GO:0009055,GO:0009266,GO:0009605,GO:0009628,GO:0009636,GO:0009889,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0010646,GO:0012501,GO:0015036,GO:0015037,GO:0015038,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0019219,GO:0019222,GO:0019725,GO:0022900,GO:0023051,GO:0030154,GO:0030611,GO:0030613,GO:0030614,GO:0031323,GO:0031326,GO:0031668,GO:0031974,GO:0031981,GO:0032502,GO:0033554,GO:0034641,GO:0042221,GO:0042262,GO:0042493,GO:0042542,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0046483,GO:0046677,GO:0048583,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051186,GO:0051252,GO:0051716,GO:0051775,GO:0055114,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901700,GO:1903506,GO:2000112,GO:2001141
KEGG koko:K03676
Seed eggNOG ortholog44056.XP_009040415.1
Seed ortholog evalue2.3e-23
Seed ortholog score115.9
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928100.9488487-UTR-E-siliculosus-1a_F_contig1587:8529..100341622928100.9488487-UTR-E-siliculosus-1a_F_contig1587:8529..10034Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1587 8530..10034 -
1696318804.4750676-UTR-E-siliculosus-1a_F_contig1587:8529..100341696318804.4750676-UTR-E-siliculosus-1a_F_contig1587:8529..10034Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1587 8530..10034 -
1622928101.0189686-UTR-E-siliculosus-1a_F_contig1587:15994..160331622928101.0189686-UTR-E-siliculosus-1a_F_contig1587:15994..16033Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1587 15995..16033 -
1696318804.5550506-UTR-E-siliculosus-1a_F_contig1587:15994..160331696318804.5550506-UTR-E-siliculosus-1a_F_contig1587:15994..16033Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1587 15995..16033 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928100.9659622-CDS-E-siliculosus-1a_F_contig1587:10034..101171622928100.9659622-CDS-E-siliculosus-1a_F_contig1587:10034..10117Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 10035..10117 -
1696318804.485837-CDS-E-siliculosus-1a_F_contig1587:10034..101171696318804.485837-CDS-E-siliculosus-1a_F_contig1587:10034..10117Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 10035..10117 -
1622928100.9755044-CDS-E-siliculosus-1a_F_contig1587:11184..113081622928100.9755044-CDS-E-siliculosus-1a_F_contig1587:11184..11308Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 11185..11308 -
1696318804.4935439-CDS-E-siliculosus-1a_F_contig1587:11184..113081696318804.4935439-CDS-E-siliculosus-1a_F_contig1587:11184..11308Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 11185..11308 -
1622928100.9868188-CDS-E-siliculosus-1a_F_contig1587:12887..129541622928100.9868188-CDS-E-siliculosus-1a_F_contig1587:12887..12954Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 12888..12954 -
1696318804.5037415-CDS-E-siliculosus-1a_F_contig1587:12887..129541696318804.5037415-CDS-E-siliculosus-1a_F_contig1587:12887..12954Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 12888..12954 -
1622928100.9962637-CDS-E-siliculosus-1a_F_contig1587:13284..135661622928100.9962637-CDS-E-siliculosus-1a_F_contig1587:13284..13566Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 13285..13566 -
1696318804.5226004-CDS-E-siliculosus-1a_F_contig1587:13284..135661696318804.5226004-CDS-E-siliculosus-1a_F_contig1587:13284..13566Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 13285..13566 -
1622928101.0083165-CDS-E-siliculosus-1a_F_contig1587:15896..159941622928101.0083165-CDS-E-siliculosus-1a_F_contig1587:15896..15994Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 15897..15994 -
1696318804.5430427-CDS-E-siliculosus-1a_F_contig1587:15896..159941696318804.5430427-CDS-E-siliculosus-1a_F_contig1587:15896..15994Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1587 15897..15994 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1587.3375.1prot_E-siliculosus-1a_F_contig1587.3375.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1587 10035..15994 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1587.3375.1

>prot_E-siliculosus-1a_F_contig1587.3375.1 ID=prot_E-siliculosus-1a_F_contig1587.3375.1|Name=mRNA_E-siliculosus-1a_F_contig1587.3375.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=218bp
MRCLSLSVILLGTAMMYPVAAFVHPFAGRTMDGLASPHGSSSSGYRAQRL
AAYSTTAPCSKGSVTARHRSVRRTTRTTTMGFKSPVDVLKQGIAKIGAGP
YDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEF
VELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDK
GELVPMLESAGCALKKL*
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mRNA from alignment at E-siliculosus-1a_F_contig1587:8530..16033-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1587.3375.1 ID=mRNA_E-siliculosus-1a_F_contig1587.3375.1|Name=mRNA_E-siliculosus-1a_F_contig1587.3375.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7504bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1587:8530..16033- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TCCTCTGTCCTCTCTCTACGGCACTGCTGGTTGTGAGCCATGCGTTGTTT
GTCCCTGTCCGTCATTCTCCTGGGTACCGCCATGATGTACCCTGTCGCGG
CTTTCGTGCACCCTTTTGCGGGCAGGACCATGGACGGGTGAGCACATCTA
CATATCTCTGCAGCTCTCTGTTGAAGTTGACAATGCGAACTGCTGTACAG
AGTACAGACGGGTTTTGGTGCTCAGCAGGTGGCTCCTGTTTCTGTACATG
TACAAGAACGAAGAGCGCGTCATTGCCCAGGGTGCCGCGTACATCAGGTC
GAGCTCATCCATCTATCGCCATTTCCAAGTCAGATGTCCTCGCCACAACC
CAAGAGCATTCGTATTGCACCGCACCTTTGTCTCATCATGAACACTGAGC
ACTGAGCACAGCTGCGATATGTTGTAGTAGCGGTTCTACTGTACACTGCT
GTATGTAGGCATACCAGTCCCTACCTCCATGAGGCCGAGTTGGTTACCAG
ACTCGGCGACGTATTGGTCGTGAATTATGCTGGCGTGAATCCCTTGGCGG
GTTGCATGGCCCATGGCTCAAATTCCATGTGATGGATCACAGAAGTGAAC
ATGATTAACGATTGTGACGGCTACACGGTTGGTCAGATAGACGTAAGCAG
GTACTATAAAACTACTGCAGCAGGTTGGTATTGTAGACGGCAGGCGATTC
CTGCCGTCCGCTTCCGTTATCAGGCAAACACACAGCCGTCAAGAACGCGG
TACCGTGTTGTTTTTTTGTTCCTCTTTCCTCCAGCCACCAATAAAATCGA
TCTTCAGTATGGTCAGCTGTGTTGAAGCTTCACCGACGCAAATAGGACGA
ATACAACAATACTCCGTACGGACCATACCAAGGGGTTTACTATTTCGTTC
CCCCCTTGCTCCCAACAAATCGCGCCCTTGCTCTGCACCCTCCCTTCTCC
TTTTCCTTCGACAATCAACAGTGAAACCTTTGCTAAGACCTATCTGTATG
GGGACACATTCTTTTGGGGAAAATCTCGATCTTGGGGCGATTTGTCAGTT
GCACGATTAATGGGAAACAGTTTTTCCCCAAGAATCTCCGCCAAGATTAC
GATTTGTCCGGGGCCCAAAATTTTCCCTCTCGAACAAATATTGGCCCAGG
ATTTGTCCCATCGAGCTTTCTGAAAACTGTTTGGGAGGCGAGACAAGTTT
TGGTGATTGCCGCGAGATTACCACAGGTCAGTCAACTTGTTCCTCCATAA
CGCTGTGAAATCTGCATGTCGCACGTTCAAGGGCCTCTAAGGCGCCCTGG
CTATACTGTGTCGACGCCACGGGCGCCGACAGCGGAGAAAAACGATCAAG
GCGCGCGAAGAAAATACACGTTTGCCCTCTGGCTTGTGCCGCGTGCGTCA
TCGGCGGAGATCACACATCTCCAACTTGAGGGAGGACAACGCCCGTTCAC
ATCCCTCGCTCCGCAGTTGATGCATCGAGGCGACACCTTCGATGCTGCCA
TCTACCCTAACCGTTCTCTCTCGGACGCAAGTGAGGTTGTTGTGGGGTAC
TTCCATCTATAGAGATAAAAAGCATAGCTGGTGACACGAACTGTTGCGTC
ATCCGTGAAGGTACCGTTCAAAGAGTTCTCCATATTCAAGTAGATAAAAA
CAGCCGGCGGAATGTTGTTCCGCGACAGCTCAGTCGTGTGCGATGCTTGT
ATCTCGTGGTCGAATCACTTCACACCCAAGCCGTTTGCACCCCAAACAGA
TACGTGAGTGCAGATGACAGCACCGAAGGTTTGGCCTCGGCGCCTACTAC
GGAGTGAAATACGTGCACGGTTGTCATCGCCTCTCGGGTTGATTCATATT
TTCGGCCGTGGACAGCAACGGAACAATTTTGTTTCTCCGCCTGCATGACG
CCACGGGCAATGTCATCTCTTCTTGCACCCCAGGTGGGCACCCACCGCTA
GAATTCACGCGGAGTGTTGAGCCTATGCAGCAATGGGAAGAGCGGCGCTT
GCTAGGACTGCGTCGTGCTCAATTACTATCACACCTTTTTTGTCTTTTTC
TGGACCAAGTGGCAGTCGCGCCTTTTTCAACTTCAAGGAGACGAGACTAA
CAACACGCCGCCTTTTTCAACATTCTACAACATTCCATCGTTCCCTATAA
ACTGCGATACGATATGTCTTGACAAACATATTTGTTCGAAAGAATGTGTC
CCCATAAATATAGGTCGACGAAGGCAACACCTGCACGACTCTGATTGCAC
CCCGCCCTCCATCATCAACCTCATTGTCCCCCCGCAACCTAGACCAACAG
AAGGATAGCCTTCACCGTCATCCCTACCCACCCGGCAGTGCCTTGCCCAT
CCCTTCGCCCAACGCCTGTTTCACAAACGTTGTATTCGCGCCTGCATTCT
TGCATCATGTTCCTAACGGACTCTCATTTGACAAGTACCACACCACCAAC
CCACCCCTGTCTTACAGCCTCGCATCACCACACGGGTCTTCGAGCAGCGG
ATACAGGGCGCAGCGCCTGGCCGCCTACAGCACTACCGCCCCCTGCAGCA
AAGGGAGCGTCACCGCGCGACACCGATCCGTGAGGAGGACGACGAGGACG
ACGACGATGGGCTTCAAGAGCCCCGTGGACGTCCTGAAGCAGGGGATTGC
CAAGATCGGAGCGGGGCCCTACGACAAGGACGCGGTGGTCAAGGTCGTCG
ACGGTTACACGTCCGGAAGCAACAAGGTCGTCGTTTTCTCGTGGACGAGG
TGGGTGATTCTGGTTAGAACGATAAAACTGCCGGTGTTGCACATACGCTT
CGAACACAATGTGTGCTTGATTCCACCCGTGCAAGGGGTAATAGAGAAGT
ATACATCACCCGGCGTGCTCAACCTCTCCTCAGTTTGAAGCGAATCGATG
GAGACACAATTTGTCGCCCCCCCAACCCCTGCAAGACATTGGCGGAGGGT
ACTATCGGCACTTTCAAGCTCTGGTCTCGCTGGTGCATTATTTTCGGAGA
CGCCACACATGACACGTTCAACCTCACAATGCGTTGCTGTGACTTTTGCT
TGAGCGCGTCCTTTTTCGTTTCGCTGCAGGTGCCCGTTTTGCAAGAAAGC
CAAAGGGTTGATTGAGGATCTGCTGGCAGACCCGGCTGATTACGAGGTAC
GTGCCCTTAGAGCTCGAGTCACAACACGACATGTACATGGAAATCGGGGT
TGCACTGAGGCTGCCATCGATTCGTGAGGTGTCCGCCAGGGGGCGGGAAG
GGGTTATATCCGTTTGTCGCCACCGCCAATTCCACGCCTCAAATCACTTG
GCGAACTTTCAGATAGCATTGGCACTGTTTGTGTGAACTTCACGTTTGTC
GTGGTTCCCCTCCCATCCACTCATAGCACATCTCCGTATCCACAGGTAGG
TCCCCCAGTGACCTTCCTGATGCCACCAGCTTACGGTAAACATTGGCCCT
ACCCTACTCCGGGTGTGGTTTCACCCCCCCGGGGTCGCACGCGAAACGAG
TTATTGATCGTTTTTCGTAGGACGCCATTCGTTCTCTCGGACCGACGTCC
CGGTCACACAGTTTCCCGCGTTGATATTCACTATGAATCCACCTGGAGGG
TCAATCAAGAACCAGAGTGACAAATGGGTCGATGTGGGTTAGAAGCAAGC
TGTATCACGCTGTTCATGGTGAATGACAAGTCGGCTGCCCGTCTTCATAT
TTTTCACTCGTTTATCTAGAGGTCCATCCATTCCACCGAGAGTGAACTTG
GCCGAGTCCGTCGCTCCAGCTCGTAGATGTTTGAAAAACAGTACGCAGAT
TCGAAAACTGTTCACTTTCCAAAGTATGCTCGGTGAACGCCTGCTCCCAT
GCGAATGCCTCCCCTAAAACAATATCACGAGCAAAGCACACAATCGCTTG
TGAATTCCCCGGGTCTATCGATTGTGATGGGTCTTCTCCTTTTTGGCCAA
CTCCTCTACGGGTCTATCGATTGTGATGGGTCTTCTCCTTTTTGGCCATC
TCCTCTACGTTTTCGAACGCCCGGGGTATTTTCTCGCTCAGTATTGTGGA
CCCGCTGCCTGGAGTATTCATGAACTGATCCTGATGGGTGTTGAGGCCGT
TTTCACTCGGTTATTGTTGTATCTTGGCAACCCGTTCCATCAACTTTCCA
AACGAGACATACTCTGGCCCCCACGCTGACAAGCATCAACATGGACACCG
ATGCCCCGGGGACGTTTCACGCCGGGTTGATTCGATTTTCTCGTCGCACG
CCTCCCACTTTGCACGCCTCGAGGCACACGCACAATCGTTTTGTGCGCCC
CCCGGGGCGTTCACAAGGGCGAATACGGTATGCATTGTCGCGAGAAGAAC
GCCCGACTCATCCTTGGGCCTTTGCATCGTGCACCAGCCCTTCGAACACC
CAGCCACAGTTTCACCACCCTGTACACGTTGTGGTATGCTGGAATGAAGA
GCGATTTTTTTCTGCCGCAGCACGACAGGAGGAGTATCCCATGCCCTGGC
CGTCGGTTAGTGCGTTTCTCCATCCCACGCTGGTTCGTTCTGTCTGTGCA
GTCCGCTCGCCTCAGCGTGCTTTGGTGACTCGACGAGAAGAATCGCCACC
TCTTCGCCGTGTCCGCACATATCGTTTTTACTCACGCCTTTCTGGCTGCG
GCGGCCTCGCTTGGCGTGGCTTGTGTGTTGGGGGTTACGCGGATCGGACG
TGTGGTTGCGGGCTGGGGGATGCAGTTTGTGGAGCTGGACGAGAGGCAAG
ATGGCAACGCTATCCGATACGAGTTGAGCCAGAAGACGGGGAGGACGAGC
GTGCCGCAGATCTGGATCGGCGGGGAGTTTGTCGGCGGCTGCAATGACGG
TGCGTGTGAACTGTGCACGTAGTGTTTTGATTCAGGTTGAACAGAGAGGT
TTAGCACAGTTTTGGGAGTATGGTGTTCGCCTGGCAGTGGCCAAGGTTGT
GGGTTTGCTTGTCTGTTTTTCTATGTCTTTTTGCCTCTGTTTTCTCTCTT
TGGGCCTCTGCCCTCTGACTTTGCCTCTGTTTCCTCTACACATAATCGGG
CAATAGCGCTTGCCTCGCTCACCTCTCGTGCAAAATACAATCACGGCGGC
TGCTACAATTCTACGGCCTCAAGTATTCACACTATCGAAACCTCCTTATT
TTTCTGGTTTCCGACGTGTGGTAAGGACAGGGACATCAAGGGCAGCTCGG
TCGCCTCAGACTAGGGACTGTTGGTTGAAGTGGTTGCTACTCGATTCTGG
TTGGAAGCCGTGACGTGTCCTGTACGCTTTGAAACGTTGGCCTTGTGAAG
CTGGATAGCAAGGCAGGATGTCCCATACGGAGTAAGGCGTACGATACGGT
TTTTGGTGCACCTGTTCTTGACGCACGTCGAGGGCTTTGCTCTTCTTTCC
TTTTTTGGATTGAGAACACTCACTTCTGTACCACGGCACATTCGGGCTTT
TCTCACGCTGCTCTCGGGAATGCATCGAACTGAATGCATTGCATCCTCAA
GCGCGTGGTGACGTCCCGAGTTTCTAGAAACACGTTTTTTGGGTTCGGAG
GTGTACATACGGTATTGATGTTTTCCCAGCGTACGCTTCCTTCGCTTGTG
TATTGACATCCAACGGCCTCGACGTGAACCGAACTCTCGGGAGTCACACT
CCGCCGGTCGCGCCGTATTTGAGCTGCAGCGGTCTCGATTCTTTTTCGAC
AATTTCGAACATGAAACTGGCCCCGTTGCCGACGTGGCTGGCGGGCGCTG
CACGAGTCCGCGCGAATGATTATGCATCTCGCCCGTGCACGTATGGAGAA
GCCCTGATGTGTCACCCCCTCCTATGCATACACCGAAACCCCGTTTCACT
GTTTGCTTCACGCCGACACCCGTCCTCGGGTAATTGGTGCCGTTCAACCA
CGAACCATGAAACCAGGCCCAGGCGTCTTCACCCTGATGGACAAGGGCGA
GCTGGTACCCATGCTGGAATCGGCTGGCTGCGCTTTGAAGAAATTATGAC
AATCACACCGTGGTTAAACGAGGTGCCTTGTAGAAGCAGCGGCCAACACG
AAATCACAAAAACAGCGATGTTTCACCAAACAAGCGGCAGGGCACACGTC
AGGGAGTTCTTGAATGACTTCTAGAGGCATACAGTGGCGTTTTTTTCTTG
TAGATTTCCAGGGGGTTGGGGGCCATGGCCGTAGCCATGCGTAAGAGGGC
GGGGTGGACTGTTTGTTTTTGCCCTGCCATCGTCCTGGATCCTACCGCAC
ATTCCTTGGGGTTTGAAACGCAGGACTATCTCAACGAAGACCTGTTCCCA
AGCCTAAAACCTGCGGTGTGGGGGTGCTGTCTGCACGGGTTAGGAAGCGA
TCTCGCCGCGCTGGGAGTGATCCGTGGTCTTGTTTTTTATTGTGCGAGCT
GTGCTCTTCTACTATGATTGTTGTAAGCAACTTCGGGGGGTGCCGTGGCA
ATGTTTCTTGCTCTTGGGGTGCTGTTGGCGTTGTCCACCCGTACCTCGTC
ACAGGAACTTGTGCCCTAGGTGGGATATCGTGAGCGTCGAGAAAGTCAGT
CTCAGATTCTGTCACAATTTTTCTGTCGCATCACGAGAATGATGGTCTTC
GTGAGCGAGACTGGAATTCTGTCACAAAATCCTTGGTGCTTGCTTTTACT
GGTGACCCCCTAGACCCCAACTTTTGGGGAACCTATAAGCTGCGTCTGTA
GAGGTGCATCTCTAGAGGGGTTGGGGCCTCTCTCGCGTATCTAGCGGTGT
GCATCATGTCCCACGGACAGTGGTGATTGCCATGGCAGTGTGCATCAGCT
CCCACATAAATGGCATTAACGATTAGACTATCGTATTGGTCCATTCGCAT
TGGGGGCTGAAAATCTACGTCTAAGCTGAGAACTTACCAGGTTGAACGAT
GTGGCGTTTGCAGTCAATATGAGTCTTGCGTTGAAGATAGGTGTGATCCA
AACTACGGATGTCTGCGGCGGTCACCCTCGGTTTAGACTGGTACAGGTTA
CCGGTTGTCTATTCAACCCTGGGCAGCAAGTCGCACTCGTAATAACCCAT
TTTGCGACATTGGAAAGGAGCCTGGAAAGCAGTGAACTCAAACGGGATTT
CGTGGTCCATACGAGGCATCTATACAACGCTTGGCACGTTGATGGACGGG
GCTATCTGACGATGACGTGACCAAGGTCAAAGCAGCAGTCGTTGAGGGGG
TGTGGGGGCATGCCAGCGATCGACCCATCAGTTGGGCGCCCCCGTGGTTT
GCAATGGCGAGTCTCCACCGATAAAGTGAACTGCGTTGGCCAGTTTGATT
ACCAACAATAACGCTGCCGTGTTGAAGAGTGATATTACCTGCGCCAGTTG
GTTGATGGTACAACTGCTGCGAAAGCACCGCTAGAAAGATTTGTTGAAAA
TAAATAGTTGAGATCCGAAGCTTACAGGGTGGGTCTTGCGTGGACGCAAT
TGCAACGAAGATGGGGACTGCCCCCAGCTAATTCCTCACCTCAGAAGATC
TGGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1587:8530..16033-

>mRNA_E-siliculosus-1a_F_contig1587.3375.1 ID=mRNA_E-siliculosus-1a_F_contig1587.3375.1|Name=mRNA_E-siliculosus-1a_F_contig1587.3375.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1308bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1587:8530..16033- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCGTTGTTTGTCCCTGTCCGTCATTCTCCTGGGTACCGCCATGATGTA
CCCTGTCGCGGCTTTCGTGCACCCTTTTGCGGGCAGGACCATGGACGGAT
GCGTTGTTTGTCCCTGTCCGTCATTCTCCTGGGTACCGCCATGATGTACC
CTGTCGCGGCTTTCGTGCACCCTTTTGCGGGCAGGACCATGGACGGCCTC
GCATCACCACACGGGTCTTCGAGCAGCGGATACAGGGCGCAGCGCCTGGC
CGCCTACAGCACTACCGCCCCCTGCAGCAAAGGGAGCGTCACCGCGCGAC
ACCGATCCGTGAGGAGGACGACGAGGACGACGACGATGGGCTTCAAGAGC
CCCGTGGACGTCCTGAAGCAGGGGATTGCCAAGATCGGAGCGGGGCCCTA
CGACAAGGACGCGGTGGTCAAGGTCGTCGACGGTTACACGTCCGGAAGCA
ACAAGGTCGTCGTTTTCTCGTGGACGAGCCTCGCATCACCACACGGGTCT
TCGAGCAGCGGATACAGGGCGCAGCGCCTGGCCGCCTACAGCACTACCGC
CCCCTGCAGCAAAGGGAGCGTCACCGCGCGACACCGATCCGTGAGGAGGA
CGACGAGGACGACGACGATGGGCTTCAAGAGCCCCGTGGACGTCCTGAAG
CAGGGGATTGCCAAGATCGGAGCGGGGCCCTACGACAAGGACGCGGTGGT
CAAGGTCGTCGACGGTTACACGTCCGGAAGCAACAAGGTCGTCGTTTTCT
CGTGGACGAGGTGCCCGTTTTGCAAGAAAGCCAAAGGGTTGATTGAGGAT
CTGCTGGCAGACCCGGCTGATTACGAGGTGCCCGTTTTGCAAGAAAGCCA
AAGGGTTGATTGAGGATCTGCTGGCAGACCCGGCTGATTACGAGTTTGTG
GAGCTGGACGAGAGGCAAGATGGCAACGCTATCCGATACGAGTTGAGCCA
GAAGACGGGGAGGACGAGCGTGCCGCAGATCTGGATCGGCGGGGAGTTTG
TCGGCGGCTGCAATGACGTTTGTGGAGCTGGACGAGAGGCAAGATGGCAA
CGCTATCCGATACGAGTTGAGCCAGAAGACGGGGAGGACGAGCGTGCCGC
AGATCTGGATCGGCGGGGAGTTTGTCGGCGGCTGCAATGACGGCCCAGGC
GTCTTCACCCTGATGGACAAGGGCGAGCTGGTACCCATGCTGGAATCGGC
TGGCTGCGCTTTGAAGAAATTATGAGCCCAGGCGTCTTCACCCTGATGGA
CAAGGGCGAGCTGGTACCCATGCTGGAATCGGCTGGCTGCGCTTTGAAGA
AATTATGA
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