mRNA_E-siliculosus-1a_F_contig1573.3312.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: D7G436_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G436_ECTSI) HSP 1 Score: 1249 bits (3231), Expect = 0.000e+0 Identity = 626/647 (96.75%), Postives = 635/647 (98.15%), Query Frame = 2
Query: 176 MEGETLDSAVDPDVTSHAVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTESPFAATSGTSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASPARENPLFGCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRWSPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSRKTLAKIAKHNADHEREAFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRQDAGYPPQALCSRGAQVGMNFVMVAIITAYAYLCTFILWAILRGCRLVDQAEEGVVLAKGEDGKFTEFKNRVADQFTQENRRFKKVEEQLMNQNELGINSRATLDARFEQLANRMAELERTHGATRTPTLGAPTSTTQSPIQPAVVIDSQESAETLRPHHQQQSVAASQPTATAQRGGMFEQVKRFFGSTA 2116
MEGETLD+AVDPDVTSHAVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTESPFAATSG STAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWT+DGWASPARE PLFGCGVIDFAGSGIVHMFGGAIGLF+SRKVRSRGGRFFP KHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRW+PKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLS+KTLAKIAKHNA+HE+E FTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVS+RGFIC MIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPR DAGYPPQALCSRGAQVG NFVMVAIITAYAYLCTFILWAILRGCRLVDQAEEGVVLAKGEDGKFTEFKNRVADQFTQENRRFKKVEEQLMNQNELGINSRATLDARFEQLANRMAELERT G T TPTLGAPTSTTQSPI+PAV IDSQES ETLRPHHQQQSVAASQPTATAQRGGMFEQVKRFFGSTA
Sbjct: 1 MEGETLDNAVDPDVTSHAVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTESPFAATSGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPAREYPLFGCGVIDFAGSGIVHMFGGAIGLFVSRKVRSRGGRFFPAKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRWTPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSKKTLAKIAKHNAEHEKEVFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSYRGFICLMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRLDAGYPPQALCSRGAQVGTNFVMVAIITAYAYLCTFILWAILRGCRLVDQAEEGVVLAKGEDGKFTEFKNRVADQFTQENRRFKKVEEQLMNQNELGINSRATLDARFEQLANRMAELERTRGTTGTPTLGAPTSTTQSPIRPAVFIDSQESTETLRPHHQQQSVAASQPTATAQRGGMFEQVKRFFGSTA 647
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: A0A6H5L500_9PHAE (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L500_9PHAE) HSP 1 Score: 630 bits (1625), Expect = 2.220e-215 Identity = 326/423 (77.07%), Postives = 336/423 (79.43%), Query Frame = 2
Query: 248 FFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTESPFAATSGTSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASPARENPLFGCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA-----------------------------------------------------AWGCAFSMLFELGYHRWSPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSRKTLAKIAKHNADHEREAFTWPWSTHINLHGAACNGILAGLVGITAG 1357
FFC L ++VGAIR TST+HILLKNIGDATVSLVAWYLLGYGFAFGEDAGH IGTSFFVFT SPFAATSG STAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVW +DGWASPARENPLFGCGVIDFAGSGIVHM GGAIGLFIS+KVRSR GRFFPPKHWDG LKNHTDQPQLNEAGFRSND WMTLGTFLLWLGWYGFNCGSVSEISTT SQNAAGRAALNTSIGA AWGCAFSMLFELGYHRWSP+YRRGDDIEDPLH+A FDVDGGEEADRAERVR+AE L KTLA IAKHNA+HE+EAFTWPWSTHINLHGAACNGILAGLVGITAG
Sbjct: 10 FFCTPL---------KHQVGAIRATSTKHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHFIGTSFFVFTGSPFAATSGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWADDGWASPARENPLFGCGVIDFAGSGIVHMLGGAIGLFISKKVRSRPGRFFPPKHWDG-----TLKNHTDQPQLNEAGFRSNDATWMTLGTFLLWLGWYGFNCGSVSEISTTESQNAAGRAALNTSIGAGEHWVLLQFYTCEAPNDSLKKSWSITFEYARGGASIQIEHRTPSYRAQRWRCRAWGCAFSMLFELGYHRWSPEYRRGDDIEDPLHVATFDVDGGEEADRAERVRLAENDLGEKTLAIIAKHNAEHEKEAFTWPWSTHINLHGAACNGILAGLVGITAG 418
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: A0A6H5L4K6_9PHAE (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4K6_9PHAE) HSP 1 Score: 407 bits (1046), Expect = 4.700e-132 Identity = 210/245 (85.71%), Postives = 223/245 (91.02%), Query Frame = 2
Query: 1346 ITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRQDAGYPPQALCSRGAQVGMNFVMVAIITAYAYLCTFILWAILRGCRLVDQAEEGVVLAKGEDGKFTEFKNRVADQFTQENRRFKKVEEQLMNQNELGINSRATLDARFEQLANRMAELERTHGATRTPTLGAPTSTTQSPIQPAVVIDSQESAETLRPHHQQQSVAASQPTATAQRGGM 2080
+ AGCATMSPHAAIGVSFVSALLYHVS+RGFIC IDDAVSAGAVHLVCGAWGV AAG TGMEGPRQDAGYPPQALCSR Q+G+N +MVAII YAY+CTF LWAILRGCRLVDQAE+GVVLAK E GKFTEFKN+V+ F QEN+RFKKVEEQL +QN+LGIN RATLD RFEQLANRMAELERT+GATRTPTLGAPTSTTQ PIQPA VIDSQES ETLRPHHQQQSVAASQPTATAQRGGM
Sbjct: 5 LNAGCATMSPHAAIGVSFVSALLYHVSYRGFICRKIDDAVSAGAVHLVCGAWGVFAAGITGMEGPRQDAGYPPQALCSREVQIGLNALMVAIIALYAYICTFFLWAILRGCRLVDQAEQGVVLAKEEGGKFTEFKNKVSTHFQQENKRFKKVEEQLTSQNQLGINFRATLDERFEQLANRMAELERTYGATRTPTLGAPTSTTQCPIQPAAVIDSQESTETLRPHHQQQSVAASQPTATAQRGGM 249
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: D7FL37_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL37_ECTSI) HSP 1 Score: 404 bits (1037), Expect = 7.510e-128 Identity = 230/453 (50.77%), Postives = 284/453 (62.69%), Query Frame = 2
Query: 176 MEGETLDSAVDPDVTSHAVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTES-PFAATSGTSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASP-----ARENPLFGCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSN-DPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRWSPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLS-----RKTLAK---IAKHNADHEREAFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLV 1489
M+ +T+++ D + ++DFTW F CLVLV+L+Q GFA+YEVG+IR TS IL KNIGDAT+SL+AW L+GY + G+D I+G S+F + PF AT + L+CLF+WSFAATCTT+VSGAVADRI VKAY VYAFLTSA+FYPLLAHAVW ++GWASP L CG +DFAGSG+VHM GG IGL +S V +R RF P+L E + D + LL YGFNCGS +IS+ ++NAAGRAALNT+IGAA GC SM FE+ YH WSPKYRRG+ I DPL P + E +V + RKT + +H F W STH ++HGAACNG++ GLVG+TAGCATM P AI VS VSALLYHVS+RG IC IDDA++A AVHLV
Sbjct: 1 MDPDTVEAMSD---LAKSIDFTWMFVCLVLVVLMQAGFAAYEVGSIRSTSASSILKKNIGDATLSLIAWVLVGYALSDGKDQLRIVGGSYFGLVQGEPFEATDDRDVGTALLECLFRWSFAATCTTIVSGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSEGESAALLNCGFVDFAGSGVVHMLGGGIGLVLSIMVENRSDRFIDA-----------------DPELVEKNTSATLDRRLFKVSHNLLPRDRYGFNCGSTLQISSEETRNAAGRAALNTTIGAAVGCVSSMGFEIMYHWWSPKYRRGEFINDPLDYLPQTKN---ECSLKGKVNQLSSPAGAGPRRRKTTGATDYVVDPEDEHNHGTFRWRLSTHKSIHGAACNGVIVGLVGVTAGCATMLPWHAIWVSIVSALLYHVSYRGIICCKIDDAINAAAVHLV 430
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: A0A6H5JKF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF7_9PHAE) HSP 1 Score: 332 bits (850), Expect = 1.110e-99 Identity = 221/515 (42.91%), Postives = 267/515 (51.84%), Query Frame = 2
Query: 299 EVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTES-----------------------------------------PFAATSGTSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASP-----ARENPLFGCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSN-DPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA-----------------AWGCAFSMLFELGYHRWSPKYRRGDDIEDPLHLAPF--DVDGGEEADRAERVRVAETHLSRKTLAKI--AKHNAD-HEREAFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRQDAGYPPQAL-CSRGAQVGMNFVMVAIITAY 1633
+VG+IR TS IL KNIGDAT+SLVAW L+GY + G+D I+G S+F + PF AT + L+CLF+WSFAATCTT+VS A FLTSA+FYPLLAHA W ++GWASP CGV+DFAGSG+VHM GG IGL +S V +R RF PQL E + D + LL G YGFNCGS +IST ++NAAGRAALNT+IGA A GC SM FE+ YH WSP+YRR + I DPL P + GE + + R R+T AK D H F W STH ++HGAACNG+L GLVG+TAGCATM P AI VS VSAL+YHVS+RG IC IDDA++A AVHLV G WGV+AAG T R D G+P Q C+ Q +N +M II Y
Sbjct: 13 QVGSIRSTSASSILKKNIGDATISLVAWVLVGYALSDGKDQLRIVGGSYFGLVQGENSILPVLVLTICLRGGLSDALVALGCRKWGAKDSFKVSGEPFEATDDRDVGTALLECLFRWSFAATCTTIVSDA--------------FLTSAVFYPLLAHAAWADEGWASPFLTSEGESAAWLNCGVVDFAGSGVVHMLGGGIGLVLSMVVDNRSDRFIDAN-----------------PQLVERNKSATLDRRLFKVSHNLLSRGRYGFNCGSTLQISTEETRNAAGRAALNTTIGAGENEHDKHELCYQRAGWAVGCVSSMGFEIMYHWWSPEYRRREFINDPLDYMPQARNTLAGELSSQDPR--------RRRTTGSTDDAKDPEDEHNSGKFRWRLSTHKSIHGAACNGVLVGLVGVTAGCATMHPWHAIWVSIVSALVYHVSYRGIICCNIDDAINAAAVHLVGGLWGVVAAGLTVDNAARVDLGFPGQEDGCTPENQAWVNVLMAVIIFGY 488
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 252 bits (644), Expect = 9.750e-71 Identity = 176/491 (35.85%), Postives = 236/491 (48.07%), Query Frame = 2
Query: 188 TLDSAV-DPDVTSHAVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTESPFAATSGTST-AVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASPARENPL-FGCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRWSPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSRKTLAKIAKHNADHEREAFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRQDAGYPPQALCS------RGAQVGMNFVMVAIITAY 1633
TL + + D S +D W F +LV +Q GFA EVG++ +T++IL+KNIGDA++ + W+LLGYG AFG+ +G IGT+ F + F A GT T S+ LFQW+FAAT T+VSGAVA+R+ AY++Y+ + ++ YP++ H W GWAS RE L FGCGVIDFAGSG+VHM GG L + V R GRF + DG AN PQ + +LGT +LW GWYGFN VS + G A + + T+I AA+G ++L + K N H W GAA NG+LAGLVG+TAGC+T P A+ + +S +Y S + + IDD V A VH CGAWGV AA + A Y C+ G VG NFV + +TA+
Sbjct: 14 TLPATIGDVKTVSDDMDIFWLMFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLLGYGVAFGDTSGKFIGTNNFDLKGALFEADDGTLTNGYSYASWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWA-GGWASAWRETDLLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRF----NEDGTAN--------TLPQQSAV--------LQSLGTLILWFGWYGFN--GVSTLYIVGFAGVAAKTMVTTTISAAFGAVTTVL-------------------------------------------------------LGKFNLGH--------WDG-----GAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGMAYYDRADKCAGAFYGGAGNAVGANFVFILAVTAW 413
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK) HSP 1 Score: 234 bits (596), Expect = 5.510e-64 Identity = 165/502 (32.87%), Postives = 226/502 (45.02%), Query Frame = 2
Query: 200 AVDPDVTSHAVDFT--WRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGED------AGHIIGTSFFVFTESPFAATSGTSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASPARENPL-FGCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRWSPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSRKTLAKIAKHNADHEREAFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRQDAGYPPQALCSRGAQVGMNFVMVAIITAYAYLCTFILWAILRGC 1678
A+ D S VD W F VLV +Q GF EVG I+ + ++IL+KN+ DA++ + W+ +G+G A G+D + IG F T F + ++ LFQW+FAAT T+V+G+VA+RI AYLVYAF + YP + H W +GWAS RE L FGCGV+DFAGSG+VH GG + L+ ++ + R GRF NG K + F+ P + TLGT +LW GWYGFN S I G A RA + ++I A GC S+L LAK+ T I GAA NGIL GLV ITA C+ + P A + + ++Y+ S + IDD V+A VH+ CG WGV+A+G E P A Y + GA G + A A++ + W+ GC
Sbjct: 15 ALQEDYASFKVDVDAFWLMFGAVLVFFMQTGFGMLEVGCIQWKNVKNILIKNVFDASLGAIVWWSIGFGVAMGKDDYVSDGSNGFIGRDLFFMTTDTFRGGPNSDKGYAWAGWLFQWAFAATTATIVTGSVAERITFSAYLVYAFCLVSFVYPCVVHWGWNANGWASAWREEDLLFGCGVLDFAGSGVVHTTGGVVALWGAKILGPRTGRFI---------NGQKQE------------FKEVSPIYQTLGTLILWFGWYGFNGASTLYIG--GYSAPAARAMVTSTISAGAGCISSVL----------------------------------------------------LAKL----------------HTGIIDPGAANNGILGGLVSITASCSVVDPEGAFVIGLIGGVIYYFSALLLLRLQIDDVVNASPVHMFCGVWGVLASGLFASEAPYGAAYYSARQSKCAGAFYGGDGSQFA--ANLAFILAVLAWSTTWGC 423
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI) HSP 1 Score: 226 bits (577), Expect = 3.900e-61 Identity = 164/515 (31.84%), Postives = 233/515 (45.24%), Query Frame = 2
Query: 185 ETLDSAVDPDVTSH--AVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDA------GHIIGTSFFVFTESPFAATSGTSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASPARENPLF-GCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSML---FELGYHRWSPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSRKTLAKIAKHNADHEREAFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRQDAGYPPQA--LCSR-----GAQVGMNFVMVAIITAYAYLCTFILWAILR 1672
ET + ++ V+ +V+ W F VLV +Q GFA EVGA++ + ++IL+KN+ DA++ + WY GYG A G D+ IGT F+ T F SG +++ LFQW+FAAT T+VSGAV +R+ AY+VYA YP++ H W+ GWAS RE L CGV+DFAGSG+VHM GG L + + R GRF DG + PQL+ + TLGT LW+GWYGFN VS ++ G A RA +NT+I C S+ F +GY D+ AA NG+L GLV ITAGC+ + P A+ + FV+ +Y+ S + IDD V A VH+ CG WGV+AAG + ++ Y + C G Q N + V ++ +A C+F+++ +
Sbjct: 9 ETFAACMEDKVSVQEISVNTFWLMFGAVLVFFMQTGFAMLEVGAVQAKNAKNILIKNVFDASLGGIMWYTTGYGIALGSDSYETSGNNGFIGTDGFLLTTGAFRG-SGDDVGINWAGWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWRETELLMDCGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRFI-----DGIP--------VELPQLSFV--------YQTLGTLCLWMGWYGFN--GVSTLAIVGLGEVAARAMVNTTIAGGVACVTSVTVAYFRIGY---------------------VDIT--------------------------------------------------AANNGVLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQIDDVVDASPVHMFCGMWGVLAAGLLAEKDNYGESYYSERQGDCCGAFYGCGGNQFTANLIFVIVVLGWAGFCSFLMFTFAK 428
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI) HSP 1 Score: 223 bits (567), Expect = 5.080e-60 Identity = 161/446 (36.10%), Postives = 215/446 (48.21%), Query Frame = 2
Query: 191 LDSAVDPDVTSHA--VDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTESPFAATSGTST-AVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASP-ARENPLFGCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRWSPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSRKTLAKIAKHNADHEREAFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLVCGAWGVIAA 1516
L SA DV S A +D W F +LV +Q GFA EVG++ +T++IL+KNIGDA++ + W+L GYG A G+ G IG++ F S F A GT T S+ LFQW+FAAT T+VSGAVA+R+ AY++Y+ + ++ YP++ H W GWAS E+ LF CGVIDFAGSG+VHM GG L + V R GRF + DG AN PQ + TLGT +LW G VS ++ G A + + T+I AA+G ++L LG L+L +D GAA NG+LAGLVG+TAGC+T P A+ + +S +Y S + + IDD V A VH CGAWGV AA
Sbjct: 18 LQSATLGDVASLAGDMDIFWLLFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLFGYGVALGDTKGRFIGSNAFALKGSHFEADDGTLTNGYSYAMWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGW-GGGWASAWVDEDLLFDCGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRF----NEDGTAN--------TLPQQSAV--------LQTLGTLILWFGXXXXXX--VSTLAINGLAGVAAKTMVTTTISAAFGAVTTVL--LG----------------KLNLGYWDA--------------------------------------------------GAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAA 372
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Match: A0A6H5L6H3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H3_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.000e-59 Identity = 156/470 (33.19%), Postives = 218/470 (46.38%), Query Frame = 2
Query: 191 LDSAVDPDVTSHAVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTESPFAATSGTSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTEDGWASPAR-----------------ENPLFGCGVIDFAGSGIVHMFGGAIGLFISRKVRSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRWSPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSRKTLAKIAKHNADHEREAFTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSFRGFICWMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRQD 1549
L+S D ++ +D W +C +LV L+Q GF+ EVG+I +T+ +L+KN+ DA + + W+ LG+GFA+G D G IGT F F+ + G ++ F+W+FAAT TVVSGAVA+RI + AY+ + L + L YP++ H VW+E GWASP R L GCG DFAG+G+VHM GG L ++ V R RF NG + N Q PA TLG +LW+GWYGFN GSV +S G + A +NT+I AA + + +G W L +A VD G H+N NGIL+GLV I+A + + P A + V++ Y + G + IDD V A AVHL+CGAWG+++ G QD
Sbjct: 14 LESLTDGLASAQDLDTAWIIWCGILVFLMQVGFSMLEVGSISPKNTKAVLIKNLTDAALGAICWWTLGHGFAYGNDVGGFIGTDSFAFSGNATHQEDGQGAEIA--QWFFEWAFAATAATVVSGAVAERIKIAAYVQLSVLITFLIYPVVVHWVWSEGGWASPRRCEDTTTAVDYQLCREESRGLLLGCGATDFAGAGVVHMTGGMCALVAAKIVGPRTKRF---------RNG--IPNRMPQ----------QSPALQTLGVLILWVGWYGFNGGSVGSVSN-GRSHLVAAAMVNTTISAA-----ASVLSVGL--W-------------LKIAYKKVDSG------------------------------------------HLN------NGILSGLVAISASGSLVQPEGAFIIGAVASAFYMLGTEGLKWFRIDDVVQASAVHLMCGAWGLVSVGLFSTGSRYQD 391 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1573.3312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1573.3312.1 >prot_E-siliculosus-1a_F_contig1573.3312.1 ID=prot_E-siliculosus-1a_F_contig1573.3312.1|Name=mRNA_E-siliculosus-1a_F_contig1573.3312.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=648bp MEGETLDSAVDPDVTSHAVDFTWRFFCLVLVLLLQGGFASYEVGAIRETSback to top mRNA from alignment at E-siliculosus-1a_F_contig1573:6466..16555+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1573.3312.1 ID=mRNA_E-siliculosus-1a_F_contig1573.3312.1|Name=mRNA_E-siliculosus-1a_F_contig1573.3312.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10090bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1573:6466..16555+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1573:6466..16555+ >mRNA_E-siliculosus-1a_F_contig1573.3312.1 ID=mRNA_E-siliculosus-1a_F_contig1573.3312.1|Name=mRNA_E-siliculosus-1a_F_contig1573.3312.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3888bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1573:6466..16555+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |