mRNA_E-siliculosus-1a_F_contig157.3295.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig157.3295.1
Unique Name	mRNA_E-siliculosus-1a_F_contig157.3295.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig157.3295.1 vs. uniprot
Match: D8LCN6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN6_ECTSI)

HSP 1 Score: 873 bits (2256), Expect = 4.100e-313
Identity = 519/567 (91.53%), Postives = 532/567 (93.83%), Query Frame = 3

Query:   66 RRWRPPPTVAATRCVFELIDTTTPALVVKRKPCVYPGAARHREALRRAKVLTATDPTTLDIRSGDFYKDFAAESRLACLESKKEIRSFDEARARGSEGQPSGERRRQEPTPEVWSPDAAKLSEAAMTAASQPGGLGTGPRVTLSDTYRSFRVLNLAERNITTIDPAFAHFENLTELDLGRNRLRKLENLPEGLVSLSCAANELSGLPDLGATTPERTRSTDSAAVAATPPAAGAGKAGAVRGETAGNSEQRGXXXXXXXXQQWGDVEFLVPGDNHNSDNHDSPTRTGWFSWASEVVPPPTETPDADNDDGRSEQPQTEQETVDSTALDVGNDGTPWGVSVALPPSREMRDGVRFQGLRVLLFVGDDEREAEGEEETVEGDASPPAEAAEAVNNGDSVGIADGFNSTDEPTHPPGGEGDVEEGEAGGKTGTPAGMRTLFGVNGGAAAPATISGECNVVLEPWVVETMREGVARRKRERLGRKEAARAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--INSGMASLAVATIGPTAAAPAAADAW 1760
            RRWRPPPT+ ATRCVF+LIDTTTPALVVKRKPCVYPGAARHREALRRAKVLTATDPTTLDIRSGDFYKDFAAESRLACLESKKEIRSFDEARA+GSEGQPSGE+RRQEPTPE WSPDAAKLSEAAMTAASQPGGLGTGPRVTLSDTYRSFRVLNLAERNITTIDPAFAHFENLTELDLGRNRLRKLENLPEGLVSLSCAANELSGLPDLG TTPERTRSTDSAAVAATPPAAG GKAG VRGETAGNSE+RG        QQWGDVEFLVPG+NHNSDNHDSPTRTGWFSWASEVVPPPTETPDADN+DG SEQPQTEQETVDSTA D GN GTPW VSVALPPSREMRD VRF GL VLLFVGDDEREAEG+EETVEGDASPPA+  EAVNNG+ VG+ DGFNSTDEPTHPPGGEG VE+GEAGGKTG PAGMRTLFGVNGG AAPA ISGECNVVLEPWVVETMREGVARRKRERL RKEAAR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +NSGMASLAVATIGPTAA PAAADAW
Sbjct:   34 RRWRPPPTLPATRCVFDLIDTTTPALVVKRKPCVYPGAARHREALRRAKVLTATDPTTLDIRSGDFYKDFAAESRLACLESKKEIRSFDEARAKGSEGQPSGEQRRQEPTPEAWSPDAAKLSEAAMTAASQPGGLGTGPRVTLSDTYRSFRVLNLAERNITTIDPAFAHFENLTELDLGRNRLRKLENLPEGLVSLSCAANELSGLPDLGTTTPERTRSTDSAAVAATPPAAGTGKAGTVRGETAGNSEERGDEEEPPLPQQWGDVEFLVPGNNHNSDNHDSPTRTGWFSWASEVVPPPTETPDADNNDGGSEQPQTEQETVDSTAPDFGNGGTPWEVSVALPPSREMRDDVRFHGLCVLLFVGDDEREAEGKEETVEGDASPPAKTTEAVNNGEFVGVVDGFNSTDEPTHPPGGEGHVEDGEAGGKTGAPAGMRTLFGVNGGDAAPAKISGECNVVLEPWVVETMREGVARRKRERLERKEAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSGMASLAVATIGPTAAVPAAADAW 600

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BLAST of mRNA_E-siliculosus-1a_F_contig157.3295.1 vs. uniprot
Match: A0A6H5JBC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC6_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 1.720e-154
Identity = 380/728 (52.20%), Postives = 394/728 (54.12%), Query Frame = 3

Query:  441 MTAASQPGGLGTGPRVTLSDTYRSFRVLNLAERNITTIDPAFAHFENLTELDLGRNRLRKLENLPEGLVSLSCAANELSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPDLGATTPERTRSTDSAAVAATPPAAGAGKAGAVRGETAGNSEQRGXXXXXXXXQQWGDVEFLVPGDNHNSDNHDSPTRTGWFSWASEVVPPPTETPDADNDDGRSEQPQTEQETVDSTALDVGNDGTPWGVSVALPPSREMRDGVRFQGLRVLLFVGDDEREAEGEEETVEGDASPPAEAAEAVNNGDSVGIADGFNSTDEPTHPPGGEGDVE-------------------------------------------------------------------EGEAGGKTGTPAGMRTLFGVNGGAAAPATISGECNVVLEPWVVETMREGVARRKRERLGRKEAARAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-INSGMASLAVATIGPTAAAPAAADA 1757
            MTAASQPGGLGTGPRVTLSDTYRSFRVLNLAERNITTID AFAHFENLTELDLGRNRL+KLENLP+GLVSLSCA+NELSG                                                                                                                                                                                                                             LPDLG TTPER R T SAAVAATPPA+GAGKAGAVRGETA NSE   XXXXXX  Q+WGDVEFLVPGDNH SDNHDSP RTGWFSWA+EVVPP TE PDAD++DGRSEQPQTEQE VDSTA DV N+GTPW VSVALPPSREMRD VRFQGLRV LFVGDDEREAEGEEETVEGDAS PAEAA+AVNN DSV   DGF+ST EPTHPPGGEGDVE                                                                   +GEAGGKTG PAGMRTLFGVN GAAAPATISGECNVVLEPWVVETMR+GVARRKRERL RKEAARAE            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +N GMASLAVAT G TAAAPAAADA
Sbjct:    1 MTAASQPGGLGTGPRVTLSDTYRSFRVLNLAERNITTIDLAFAHFENLTELDLGRNRLQKLENLPKGLVSLSCASNELSGRALDGVTGLPLLCSLDLSFNNLEVHSLLPPPKAELPRRCLLNASGHNIGDRPAQPTKNGSDGDDGVQRQFRRPEAPPPLATGEKYMHFQEKFSSLEHLDISWNCLCDLDRLLRTLMRVPCPLQDNLRHLFLAGNPFCLLPAYRERVLGRGFGPGLVMLDDLPVSPVEYRSAAATAAAVEKAQEGCLDGVRENEDEDHNKRPRGKGSFEAVHFHVKLLRLSGLPDLGTTTPERPRCTASAAVAATPPASGAGKAGAVRGETASNSEXXXXXXXXXPLQKWGDVEFLVPGDNHYSDNHDSPARTGWFSWAAEVVPPLTEAPDADSNDGRSEQPQTEQEAVDSTASDVANNGTPWEVSVALPPSREMRDDVRFQGLRVQLFVGDDEREAEGEEETVEGDASSPAEAAKAVNNVDSV--VDGFSSTGEPTHPPGGEGDVEGEAQDQDRVRPQMLPSRRRRLAGRGHLSLSPFLDPAWMMREQHQPQPQQRQQERGEDVTEAESVVTADGEAGGKTGAPAGMRTLFGVNDGAAAPATISGECNVVLEPWVVETMRKGVARRKRERLERKEAARAEAEVNAANDPKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNPGMASLAVATTGSTAAAPAAADA 726

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig157.3295.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig157.3295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LCN6_ECTSI	4.100e-313	91.53	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5JBC6_9PHAE	1.720e-154	52.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig157	contig	E-siliculosus-1a_F_contig157:15227..23562 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1737
Model size	2115
Exons	11
Hectar predicted targeting category	other localisation

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928081.3879035-UTR-E-siliculosus-1a_F_contig157:15226..15578	1622928081.3879035-UTR-E-siliculosus-1a_F_contig157:15226..15578	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig157 15227..15578 -
1696318798.9035516-UTR-E-siliculosus-1a_F_contig157:15226..15578	1696318798.9035516-UTR-E-siliculosus-1a_F_contig157:15226..15578	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig157 15227..15578 -
1622928081.5591078-UTR-E-siliculosus-1a_F_contig157:23536..23562	1622928081.5591078-UTR-E-siliculosus-1a_F_contig157:23536..23562	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig157 23537..23562 -
1696318799.0205061-UTR-E-siliculosus-1a_F_contig157:23536..23562	1696318799.0205061-UTR-E-siliculosus-1a_F_contig157:23536..23562	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig157 23537..23562 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig157.3295.1	prot_E-siliculosus-1a_F_contig157.3295.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig157 15579..23536 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig157:15227..23562-
coding sequence from alignment at E-siliculosus-1a_F_contig157:15227..23562-

protein sequence of mRNA_E-siliculosus-1a_F_contig157.3295.1

>prot_E-siliculosus-1a_F_contig157.3295.1 ID=prot_E-siliculosus-1a_F_contig157.3295.1|Name=mRNA_E-siliculosus-1a_F_contig157.3295.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=579bp
MTTVAVVSDHNRPRRWRPPPTVAATRCVFELIDTTTPALVVKRKPCVYPG
AARHREALRRAKVLTATDPTTLDIRSGDFYKDFAAESRLACLESKKEIRS
FDEARARGSEGQPSGERRRQEPTPEVWSPDAAKLSEAAMTAASQPGGLGT
GPRVTLSDTYRSFRVLNLAERNITTIDPAFAHFENLTELDLGRNRLRKLE
NLPEGLVSLSCAANELSGLPDLGATTPERTRSTDSAAVAATPPAAGAGKA
GAVRGETAGNSEQRGDEEEPPPPQQWGDVEFLVPGDNHNSDNHDSPTRTG
WFSWASEVVPPPTETPDADNDDGRSEQPQTEQETVDSTALDVGNDGTPWG
VSVALPPSREMRDGVRFQGLRVLLFVGDDEREAEGEEETVEGDASPPAEA
AEAVNNGDSVGIADGFNSTDEPTHPPGGEGDVEEGEAGGKTGTPAGMRTL
FGVNGGAAAPATISGECNVVLEPWVVETMREGVARRKRERLGRKEAARAE
AEANAANDPKGKNAKAAAAAAAAAKLQEGDDEEEEEEEIGPSPSARAEVE
VTINSGMASLAVATIGPTAAAPAAADAW*

mRNA from alignment at E-siliculosus-1a_F_contig157:15227..23562-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig157.3295.1 ID=mRNA_E-siliculosus-1a_F_contig157.3295.1|Name=mRNA_E-siliculosus-1a_F_contig157.3295.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8336bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig157:15227..23562- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTACCATTGGCCATCAGGTCAGTGACATGACTACTGTGGCAGTGGTATCG
GATCACAATCGGCCCAGGCGATGGCGTCCGCCGCCTACCGTCGCGGCGAC
CCGCTGTGTTTTCGAGCTGATCGACACGACAACTCCGGCACTAGTCGTCA
AGAGAAAGCCCTGCGTTTACCCGGGGGCAGCACGACACCGTGAAGCGCTG
AGGTGAGACAGCGGAGACGGTGTGATACCCAGATCCTGTTGCCACTGCAG
CACCAGATTACGTCCTTCCTTCTGGAGATGTCGTTGAGGGCCTTCAGCAA
CAAACTCTCTTCTGGTACCCCTGTATGCCGGAGAACGCTCGTGTCCACAT
GGTGATACAGTAGAGACTGGGTGATACGTTGGTCATTTGCTTACGAAGCT
TCATCTGGAGGGAACGTTTGCTTCCGAAGCTTCATCTGGAGGGAACACGA
CAGGATAGAAGATGTCAGCACATTTCTTGTGCCTCCTCGACGCTTGTACG
GCGTGCGCGTACGTCTCTCACCGCGTTGATATCATGGTTTGCATCGGCTG
TACATATTTGTTCACTATCCGAGAGTAGCACCAGATAAGAGAGGTACAGT
GGAACAGAGTAAGAGATAGAGACTGAATGGCACACAAGAAGGCAGGCAGA
GACAAAAGACATAGAAGACTGCCAAACTCCTACTGATGTATGCATTTGGT
CTACATCCCAACGCCCCTTAGCTCTTCGTTTCTCCCCTGTAGACGGCGAC
AAGTAGTCACCTCGCCTGACCCTGCCAGCAATTTGTTTTCATTGGTGGTG
GCCTACATGCAGCTCATATTTCCATGCCCCGAACTTGTATTGGTGGTGCG
TAGACGCGCGAAGGTGCTTACCGCAACGGATCCTACCACCTTGGACATCA
GAAGTGGCGATTTCTATAAAGACTTTGCCGCGGAGAGCAGACTCGCTTGT
CTCGAGAGCAAAAAGGTGCGCACCGAACATCATTCCAGGCTGAACTACTG
TAGAGGATAACTCACTTTTGAGCGCAAGATAAACTCGTGTCTGTGCTTGG
AATAATTTCAGGGAAACGACTTTAATTACGCACGGTTCGGGGTGGGAAGA
GCGTTTGGCATGCCAACGATGCATCTGGTACTCTCGACTGGGTGAACGAA
CGTCGAGCCCTTTGTTGTCTGTTCCTCGCGATGTGATTCGGGTAGAGTTA
TCTCGACAAACTACTTATCCAAAGGGGTTAACGGAGGCTACCAATAGTAG
TCAACGGGTATCATTCTCTAGACGTAGTTCACGCTATAGCCTACCCTTGC
CCTCGTGGAACTGAACAGGAAATCAGATCCTTCGATGAAGCGCGGGCGAG
GGGAAGCGAAGGACAACCCTCTGGCGAACGGCGGCGGCAAGAGGTGAGCT
CTCCGGTACCTCCTCCATGAAAACCGTTCTGCACCCCTGATGAACTAGCC
TTTGTGGGGATGGAAATTCTGCAGCAGAGCAACCTACGAAGTAACCCCCA
CCAGACACTTGAAACTACAGCTGCTGCTGACCCAGAGCGTACGAGCAGAA
TATCGGTACCAATACAGAGCTTGTCCTGTCCACCAGGTATGATTGAACTT
CACCACCACCAAACTTGAATAGAACCTTTTGAATGCACATCGCAGATTGG
TTGCTCCCAATGTAAAGACCTCCACGAAGGTTCGGCCCACGCTACACAAT
GGTCGCGGACGTCGTCGTGCCAGGAGCATACTTGAACACGTACGCCGCAC
AGGTCGCCCTTTACGGTAATCTACCACCGCCAACTTGGTCTCCACTCTTT
TGCAGCCTACGCCGGAGGTTTGGAGCCCAGACGCTGCCAAACTCTCCGAG
GCAGCGATGACTGCGGCCTCTCAGCCGGGGGGTCTTGGAACGGGGCCCCG
CGTAACCTTATCGGACACCTACCGCAGCTTCCGGGTACTAAACCTCGCCG
AGAGAAATATCACAACGGTGAGAGGAACCTGGCGGCCTTCGCCGTACACG
GCTTGTGGGGTTTTCCGTCCGCTCTGTTTTTTTCTGGTTCGGCTTCGATT
CGTGGACCTTTTCAAACCTCGGGCACTATGTATCCGTTTGTCATTGAAGT
GAAACTGGGTTCGCGCCGTTACCGAGGGTCTAATGCTGACTGATCTGAAC
ACCAGGCATAGGTGGGCATCAACTGCGACAACAAGAGGTAGGTGTGTTGA
GTGTCGCCGTAGGTAAGATGAACAAACGCCCTTCACGGCAATCTCTTGCA
GATCGACCCCGCTTTCGCGCACTTCGAAAACCTGACGGAGCTGGACTTGG
GTCGAAACCGCCTCCGAAAGCTGGAAAACCTCCCGGAGGGACTCGTATCA
CTGTCGTGCGCAGCGAACGAGCTTTCCGGTGAGGACCACTCATGCGTGGT
GGTGCAGGGCACAGGAAAGACGACCAACGCGGTTGCGTCTTTTTGTCCCG
AAATTGTCACTGCGTAACGCAACAAGCACTCCTCGTCGTTGAGTTTACGT
CCAGCCCACCGGATCTAGAGCGGACAGAGTTTAACGTCGTGTTCGGGGTT
TCCGACAATAACCGCATAGATTGCACTGTACCTTATGTTTGGTCTGTGAG
ACTAAATTTTTAGCAGGAAGCCAACCTTTGCTTGTAAGTTTGTCGTGTCC
TGCTTGTTATCTCGCTCGGTGAAAGTATGACGGAGTATGAGGGGGGCCCA
TGGCTGCACCTTGACATCTCCGTCTTTGCGAGAGAGATAGACCGAATCCG
ACCGCGTGTGGTCTTTTTGTTGCCCGTTCCATTGGCCACGCGCACCGTTC
AAGCTCTGAAGAAGCTCTCAACGTTGAACATATCGACTCTTCGAATATTT
CGTATGATTTGCACTCGAAACCACCACTAGGTCGCGCGTTGGACGGCGTC
ACCGGAATGCCTCTCCTCTGCTCCCTAGACGTGTCGTTCAACAATCTAGA
GGTGCATTCGCTCCTCCCGCCCCCGAAGGCCGAGCTACCACGGCGGTGCC
TCCTCAACGCCAGCGGCCACAACATCGGCGATCGACCAGCCCAACCAATC
AATGACGGAGGGGACGGCGACGACTGCGTGCAGCGACAATTTCGCCGTCC
CGAAGGACCGCTCCCGCTCGCAACGGGAGAAAAGTGTATGCACTTCCAAG
AGAAGTTTTCTTCCTTGGAGCACCTGGATATTTCGTGGAACTGCCTCTGC
GACCTGGATCGGCTCCTCCACACCTTGATGCAAGTGCCGTGGTGCATAAA
GAGTCGTCTCCGTGCAATGCTGGTCGTGTTGCTGTCAGCCCTGCTCTTGG
GCACCATGAAACTATATTTCGATGTCTCCCACTACGTTTTCTTCGGTGTA
GCACGCTAATCCGGGAAGACATTGGACATTGGGAGATGATTACAGCAAAA
CGCGACTAAATGGGGGGGAGGGCGTGGAGACGGAGAATCACAACATGGCC
ACCATCGACGCCCAAAGAACGAAAACATAGAACGCTGCCACCCCCTCATC
CCCGCCGGTCGCGTGCTGATGTGAACAGCCGGTGGCCATCGCGTTCCCGT
CTGACTAGATCGGGAAATTCCGCAGTCATTGTCCTCCCTCCGCCGTCACC
CCTACTCCGCCGCCGTCCTTTCGCCACAGCCCGCTGCAGGGCAACCTTCG
GCACCTCTTCCTAGCGGGAAACCCTTTCTGCCTCCTCCCGGCCTATCGAG
AGAGGGTCTTGGGTCGAGGGTTCGGGCCTGGTTTGGTTGTGCTGGATGAT
CTACCCGTCAGCCCAGTCGAGTACGGCTCCGCTGCAGCAACTGCGGCTGC
CGTGAAAAAGGCTCAGGAGGGTTGCTTAGACAACGTACGTGAGAATGAAG
ATGAAGACCACAACAAACGTCCCCGGGGTAAAGGCTCTTTCGAGGCGGTG
CACTTCCATGTTAAGGTATACTCATGTTTCTAGTTCCCTCCCATGGTTCT
TGAGGGTGGTATGTTGCAGAGAATCGCTGGTCGGTACGGGCTATGCGGGC
AGGGGCAGGATGCGGGAAGGCTCCCTGACGGCGACATGGGGAAAATAGTC
CGCGACACGACGCTCATGTGGTAGGTGCTTGCCCGTTTCACACCCAAACT
ACGGTTTTTCCACAACCAACATTTCGGAGCTTCCGTACAAATGTCATCGT
CACCAATTCATTGGTTTTCGCCGCTGCCAACCCCCTCACATGCTGTTTCG
ACCGCACACACACCGTACTTGACCCGCCTGGATCCTCCTGTCCATCACCC
TCCCTCCCCACCAAACACACACTCGGTGCTGATTTTTGCAACCACAACGT
ATTCGTGGTGTACTGGTGGAACAATCGCTGCGCGCACTAGCTGCTGCGCT
TATCAGGACTTCCGGACCTCGGCGCCACTACTCCCGAACGCACCCGATCA
ACGGACAGCGCCGCCGTTGCTGCAACGCCTCCTGCCGCGGGTGCAGGGAA
GGCAGGAGCGGTCCGGGGGGAGACGGCGGGTAACAGCGAGCAAAGAGGGG
ACGAGGAGGAACCACCGCCCCCGCAGCAGTGGGGGGACGTTGAGGTGGGA
ACGAATGATCGGACCCTTTTGAGGAAGCCGGAACGGTTCCCGGTGTCAAC
CCGGAAGTTAGGCACTCCGCCTCCTCCGAGAAAGAGAGACCTTCCACCAT
GTGTTTCGAGGCATGTTGGCCACGAATATGCTAATGTTTCGGGGAGAAGG
TTGGAGTATTCCTCGAGCCCTCTTCTTCCCAGCCTCAGGAACAATTCTAC
AAATAGTTTAACGTTCTATTCGTGGCTACCCCCACATGTGTAGGCACGTC
TCCGAGTGAAGCCCGTGTTGTTGTGTTCAACCACGATCCGGTTCATGTTT
CAGACCTGACGTGCGCGTGCCTTCGCTTTATTGAGTCCGCAAGGCCGTTG
ACGATGCTGTTGTAACTAGAAGCGGCGGCCTTAGTGCTTCTGCCACAGTC
CTAACTGAGGCTGCCTTGGTGGCAGTGATGATATCGCTGCTGCTGGTGCG
TCCTCGGCTCGAGCTACACACGAGATGAGCTCAGTGAAAGTAGTCAAATC
CGCACACTACCCAGGAAAATGTGACTGATGGGCCGGATGACTTACTGTCG
AATGGGGAAACACATCTCACCGTGTGTGTGTCTCGGTCTCTCGCTGTCTT
CGTCCCTGTCTGGATTTGTTTCAGTTCCTTGTCCCAGGCGACAACCACAA
CAGCGACAACCACGACAGCCCTACAAGAACGGGATGGTTCTCCTGGGCTT
CCGAGGTCGTCCCTCCTCCGACTGAAACCCCCGACGCCGACAACGATGAC
GGGCGGTCCGAGCAACCACAAACCGAGCAAGAGACGGTCGATTCCACCGC
TCTAGACGTTGGGAATGATGGCACGCCTTGGGGAGTGTCCGTCGCACTTC
CTCCTTCTAGGGAGATGCGGGACGGTGTGCGATTCCAAGGGTTGCGCGTC
CTACTTTTCGTCGGGGACGACGAGCGCGAGGCCGAGGTAAGAATGCGATA
TAGTCTTGGCGACGCTGTTGTTGGTTGGTTGACTGATGTTTGAACTTTGT
CGTTTTTTTGACATTGGTGTTGATTGTTCGGTATGTGCTGATCTGCACAA
AACGAAGGCACACAGTCCCGTATCCTCGCGGCGATCGTGTTGACATTCAC
GTCGAGGAAGACCCTACACTCGACTGATGGCTCATATCTTCAAAACGAGT
AACCACGCCAACCACCCGTCCACGACTGTCGTGCACCAAAACATGGTTAA
ACCATTAATTCTCTGTGTCCGTCCGAAGAGGCCAAAAATGGCAGCAAGGT
GAAGACTCGGATGTTTCCCGTCCCTCCGGAGTTTCTTCGCCTGCTTTTGG
GGGCACAGAGCAGAAGAATCCGTCTGCACTCAGATGTCCGTCCAGCAACC
TAACGTCAACTCATGGTGTGCCGGCATGTTTGCCTTGTTTCCTCTAGACC
TATATAGAGCGGCAGTGCTTGAGTGAAAAAGCAATAAACTCCCCATTTCT
TGCGTTTTTCACACGTGTCGCGAACACGTGTTTCGGGTCCCAGGGAGAGG
AGGAAACAGTCGAGGGAGACGCGTCACCACCGGCAGAAGCAGCCGAAGCG
GTAAATAACGGGGATTCCGTTGGAATTGCTGACGGTTTCAACTCAACGGA
TGAACCAACGCACCCCCCGGGAGGCGAAGGGGATGTCGAAGGTAGGCAAG
GGCAGTGCGGTAGAATTTGGGGATTGGGTCAAAATCTTTGCGCGACATAA
TCAGGCTGCGAAGGAATACGTAAGAAGGATTTGATTTTTTCGCTGTTGAA
ATCATTGCGGATGTTGTGGTATCTAGCAAGCAAGAGTTTTTCGTCACTTA
TTTTCCCACCCATGACGAAGATTTCCAATGTTGAAACGACTAGGTAGCAC
CCATTTCACATCTCCCTGCGTGTCTTCCATCCGGTTGGTGGAAAAGGAGA
GGCACAAGACCAGGGTAGAGTGAGGTCACAGATACTGCCGTCGCGGAGGC
GACGGCTCGCGGGACGCGGGCACCTTTCCCTGTCCAATTTCTTGGACCCC
GCCTGGATGATGAGGGAGCAGCAGCAGCCCCAGCCCCAGCAACGTCGACA
GGAAAGGGGTGAAGACGTAAAGGAAACGGAATCGGTGGTGACAGCAGGTT
TGTTGCCCATTGCATGGTCAACACTGAGGGCCTCACATACATTGGACAAT
GTTCAGTGAAGGGTATGGGTTTGTTGACCAAAACACAATCGTCGACCGTG
GTCAGAGTTTGTTGGTGGTGGTTGGGGTATTTCTCTAGTGTTTCCTCGTC
CGGAAAATAGCAGGGGTGGTAGGGCTACTGGATTCAGTGGAAGCACGAAT
GGTTGTGCGGGACTGAGCCTGCGAGCCCAAATACACCTCGCCGTCGTCGT
GTATCTTGCCGGAAACAACACACTTTCGAACAACCGAAGAAGGGGAGGCC
GGCGGAAAGACGGGAACACCAGCCGGAATGAGGACCTTGTTTGGTGTCAA
CGGTGGAGCCGCCGCTCCCGCCACGATATCGGGAGAGTGCAACGTTGTGC
TCGAGCCATGGGTGGTGGAAACGATGCGAGAAGGTATGTGTGCTTGTTCC
GTACCGTCACGGCTGATAGAAGGTGCTGGGCAGAGGTAAGAGCGGTCTTC
TAAGTGAGAAATCCAACAACATCAACAACGACCGCGACAATAAGGCCACG
CAACATAGTGGACTACACGGTCGCGGAGGGAAAGAAACGGCTGGATCCTT
CTCGCGAAGCAAGTTCATAATTATCGCGGGGACCCACCCTTGTTGCATCA
ATCCTGCTTCTGTGAAGGTGTCGCCCGTCGGAAGAGGGAACGGCTGGGGA
GAAAAGAAGCGGCACGGGCAGAGGCCGAGGCGAATGCTGCCAATGACCCC
AAAGGAAAGAACGCCAAAGCGGCTGCTGCTGCGGCGGCTGCAGCGAAACT
TCAAGAAGGAGACGACGAGGAGGAGGAGGAAGAGGAAATCGGGCCTTCCC
CTTCCGCTAGAGCAGAGGTATGGAACGTAGGTGGTTCGGGATGTCGTACA
ACTTGGGGAACGTTTGCTACTGTCAAGGAAGGGGCGTAGGATTAGACGAA
CCCCATGTACATCCCGTAACGATGCTTCGATTCAGTGGTCTGTGGTACAA
TCTATCATGGGCGGCATCGAGAATGGGTGTAGCGAGAAAATCGTACGATC
CACCGATGAAAACGTTGTTGTCATCAACCTGTCCTTGCCCTTCGGTCAGA
AGTAGGGCTGTCGTTTGCTATCGCGGATCAACGGCAGCTTCAGTCGGGAA
AAGGAAACCGTCGGTGCGGTGTACTGGACCTCCCCATCTCGTCGGACGTT
CATTTCTGGACCCGGATTACCGTCGCCCTATGTATTTGCAGGTAGAAGTG
ACAATTAACTCGGGCATGGCTTCGCTAGCGGTCGCCACCATCGGTCCGAC
TGCTGCTGCTCCTGCTGCAGCCGATGCCTGGTGAAACCTGCATGTAGCTG
TCGTGTACGTACGCGCCCCAACCAAGGAACCAAGAAGCCTTGGACAAACC
AACGCTGTTCATCGGTGCTGGCGGGAAGGTTGATACTGAATGTCTCGATG
TAGGGAGAACATGTTAGCGGACCGGTTGTACACAAACGGTCGACGGCAAA
AAACAAGTTCATAGGTTCGCGGACTAGGTTGGGACGTCCGTGGACGCCTA
CGGACGCTTGCGGACGTGTCCACCGCCCGCATCCGCGAACGCAATATTGA
GATTTTCCCCGTTTGGTTTTGTATAGACCATCTTTTGACGCTTCGCGACA
AGCAGAGCACCGTGTTCCCATGACCTAAATCCTGAC

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig157:15227..23562-

>mRNA_E-siliculosus-1a_F_contig157.3295.1 ID=mRNA_E-siliculosus-1a_F_contig157.3295.1|Name=mRNA_E-siliculosus-1a_F_contig157.3295.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3474bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig157:15227..23562- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACTACTGTGGCAGTGGTATCGGATCACAATCGGCCCAGGCGATGGCG
TCCGCCGCCTACCGTCGCGGCGACCCGCTGTGTTTTCGAGCTGATCGACA
CGACAACTCCGGCACTAGTCGTCAAGAGAAAGCCCTGCGTTTACCCGGGG
GCAGCACGACACCGTGAAGCGCTGAGATGACTACTGTGGCAGTGGTATCG
GATCACAATCGGCCCAGGCGATGGCGTCCGCCGCCTACCGTCGCGGCGAC
CCGCTGTGTTTTCGAGCTGATCGACACGACAACTCCGGCACTAGTCGTCA
AGAGAAAGCCCTGCGTTTACCCGGGGGCAGCACGACACCGTGAAGCGCTG
AGACGCGCGAAGGTGCTTACCGCAACGGATCCTACCACCTTGGACATCAG
AAGTGGCGATTTCTATAAAGACTTTGCCGCGGAGAGCAGACTCGCTTGTC
TCGAGAGCAAAAAGACGCGCGAAGGTGCTTACCGCAACGGATCCTACCAC
CTTGGACATCAGAAGTGGCGATTTCTATAAAGACTTTGCCGCGGAGAGCA
GACTCGCTTGTCTCGAGAGCAAAAAGGAAATCAGATCCTTCGATGAAGCG
CGGGCGAGGGGAAGCGAAGGACAACCCTCTGGCGAACGGCGGCGGCAAGA
GGAAATCAGATCCTTCGATGAAGCGCGGGCGAGGGGAAGCGAAGGACAAC
CCTCTGGCGAACGGCGGCGGCAAGAGCCTACGCCGGAGGTTTGGAGCCCA
GACGCTGCCAAACTCTCCGAGGCAGCGATGACTGCGGCCTCTCAGCCGGG
GGGTCTTGGAACGGGGCCCCGCGTAACCTTATCGGACACCTACCGCAGCT
TCCGGGTACTAAACCTCGCCGAGAGAAATATCACAACGCCTACGCCGGAG
GTTTGGAGCCCAGACGCTGCCAAACTCTCCGAGGCAGCGATGACTGCGGC
CTCTCAGCCGGGGGGTCTTGGAACGGGGCCCCGCGTAACCTTATCGGACA
CCTACCGCAGCTTCCGGGTACTAAACCTCGCCGAGAGAAATATCACAACG
ATCGACCCCGCTTTCGCGCACTTCGAAAACCTGACGGAGCTGGACTTGGG
TCGAAACCGCCTCCGAAAGCTGGAAAACCTCCCGGAGGGACTCGTATCAC
TGTCGTGCGCAGCGAACGAGCTTTCCGATCGACCCCGCTTTCGCGCACTT
CGAAAACCTGACGGAGCTGGACTTGGGTCGAAACCGCCTCCGAAAGCTGG
AAAACCTCCCGGAGGGACTCGTATCACTGTCGTGCGCAGCGAACGAGCTT
TCCGGACTTCCGGACCTCGGCGCCACTACTCCCGAACGCACCCGATCAAC
GGACAGCGCCGCCGTTGCTGCAACGCCTCCTGCCGCGGGTGCAGGGAAGG
CAGGAGCGGTCCGGGGGGAGACGGCGGGTAACAGCGAGCAAAGAGGGGAC
GAGGAGGAACCACCGCCCCCGCAGCAGTGGGGGGACGTTGAGGACTTCCG
GACCTCGGCGCCACTACTCCCGAACGCACCCGATCAACGGACAGCGCCGC
CGTTGCTGCAACGCCTCCTGCCGCGGGTGCAGGGAAGGCAGGAGCGGTCC
GGGGGGAGACGGCGGGTAACAGCGAGCAAAGAGGGGACGAGGAGGAACCA
CCGCCCCCGCAGCAGTGGGGGGACGTTGAGTTCCTTGTCCCAGGCGACAA
CCACAACAGCGACAACCACGACAGCCCTACAAGAACGGGATGGTTCTCCT
GGGCTTCCGAGGTCGTCCCTCCTCCGACTGAAACCCCCGACGCCGACAAC
GATGACGGGCGGTCCGAGCAACCACAAACCGAGCAAGAGACGGTCGATTC
CACCGCTCTAGACGTTGGGAATGATGGCACGCCTTGGGGAGTGTCCGTCG
CACTTCCTCCTTCTAGGGAGATGCGGGACGGTGTGCGATTCCAAGGGTTG
CGCGTCCTACTTTTCGTCGGGGACGACGAGCGCGAGGCCGAGTTCCTTGT
CCCAGGCGACAACCACAACAGCGACAACCACGACAGCCCTACAAGAACGG
GATGGTTCTCCTGGGCTTCCGAGGTCGTCCCTCCTCCGACTGAAACCCCC
GACGCCGACAACGATGACGGGCGGTCCGAGCAACCACAAACCGAGCAAGA
GACGGTCGATTCCACCGCTCTAGACGTTGGGAATGATGGCACGCCTTGGG
GAGTGTCCGTCGCACTTCCTCCTTCTAGGGAGATGCGGGACGGTGTGCGA
TTCCAAGGGTTGCGCGTCCTACTTTTCGTCGGGGACGACGAGCGCGAGGC
CGAGGGAGAGGAGGAAACAGTCGAGGGAGACGCGTCACCACCGGCAGAAG
CAGCCGAAGCGGTAAATAACGGGGATTCCGTTGGAATTGCTGACGGTTTC
AACTCAACGGATGAACCAACGCACCCCCCGGGAGGCGAAGGGGATGTCGA
AGGGAGAGGAGGAAACAGTCGAGGGAGACGCGTCACCACCGGCAGAAGCA
GCCGAAGCGGTAAATAACGGGGATTCCGTTGGAATTGCTGACGGTTTCAA
CTCAACGGATGAACCAACGCACCCCCCGGGAGGCGAAGGGGATGTCGAAG
AAGGGGAGGCCGGCGGAAAGACGGGAACACCAGCCGGAATGAGGACCTTG
TTTGGTGTCAACGGTGGAGCCGCCGCTCCCGCCACGATATCGGGAGAGTG
CAACGTTGTGCTCGAGCCATGGGTGGTGGAAACGATGCGAGAAGAAGGGG
AGGCCGGCGGAAAGACGGGAACACCAGCCGGAATGAGGACCTTGTTTGGT
GTCAACGGTGGAGCCGCCGCTCCCGCCACGATATCGGGAGAGTGCAACGT
TGTGCTCGAGCCATGGGTGGTGGAAACGATGCGAGAAGGTGTCGCCCGTC
GGAAGAGGGAACGGCTGGGGAGAAAAGAAGCGGCACGGGCAGAGGCCGAG
GCGAATGCTGCCAATGACCCCAAAGGAAAGAACGCCAAAGCGGCTGCTGC
TGCGGCGGCTGCAGCGAAACTTCAAGAAGGAGACGACGAGGAGGAGGAGG
AAGAGGAAATCGGGCCTTCCCCTTCCGCTAGAGCAGAGGTGTCGCCCGTC
GGAAGAGGGAACGGCTGGGGAGAAAAGAAGCGGCACGGGCAGAGGCCGAG
GCGAATGCTGCCAATGACCCCAAAGGAAAGAACGCCAAAGCGGCTGCTGC
TGCGGCGGCTGCAGCGAAACTTCAAGAAGGAGACGACGAGGAGGAGGAGG
AAGAGGAAATCGGGCCTTCCCCTTCCGCTAGAGCAGAGGTAGAAGTGACA
ATTAACTCGGGCATGGCTTCGCTAGCGGTCGCCACCATCGGTCCGACTGC
TGCTGCTCCTGCTGCAGCCGATGCCTGGTGAGTAGAAGTGACAATTAACT
CGGGCATGGCTTCGCTAGCGGTCGCCACCATCGGTCCGACTGCTGCTGCT
CCTGCTGCAGCCGATGCCTGGTGA