mRNA_E-siliculosus-1a_F_contig15687.3286.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15687.3286.1
Unique NamemRNA_E-siliculosus-1a_F_contig15687.3286.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A5S3PP63_9FLAO (DNA primase n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PP63_9FLAO)

HSP 1 Score: 504 bits (1299), Expect = 1.570e-173
Identity = 267/311 (85.85%), Postives = 293/311 (94.21%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            KVCTFP  EDPDSFAK N+LE VQ+YL +NSKDFIQFKAN+LAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECA+IMKVSEGVLFSTLAQIGKK   DA+K VKQEQK+F+VVKNEVAVEKVDVQYELERKIIE+LLLYGKEEQ+FEDLVLKENEEGDLILEPES E+KVYEKI+LDLQ+DEIELTN +FRNIY KLIAELNEKEDFTVSTFL+DLDQ+MVSE+SSI+MEEEKY+LHDW RKDIYPKEK+ +I+QLVSETILTLRC+LIKKRM +LQK+T D +EDNRETLEEIMNYLQLN LL
Sbjct:  340 KVCTFPEGEDPDSFAKNNDLEEVQEYLNSNSKDFIQFKANLLAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECANIMKVSEGVLFSTLAQIGKKDIADASKKVKQEQKAFDVVKNEVAVEKVDVQYELERKIIEILLLYGKEEQEFEDLVLKENEEGDLILEPESLEIKVYEKIFLDLQDDEIELTNEKFRNIYLKLIAELNEKEDFTVSTFLADLDQEMVSEVSSIMMEEEKYVLHDWARKDIYPKEKETVISQLVSETILTLRCYLIKKRMQTLQKDTEDKSEDNRETLEEIMNYLQLNTLL 650          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A3B0TTX6_9ZZZZ (DNA primase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0TTX6_9ZZZZ)

HSP 1 Score: 499 bits (1284), Expect = 2.920e-171
Identity = 264/311 (84.89%), Postives = 287/311 (92.28%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            K+CTFP  EDPDSF+K NELE V  YLK NSKDFIQFKA +LAEEA DDPIKRADTVRDIVNSI+KIPDAIKREIYIQECA IM +SEGVLFSTLAQIGKK Q DA+K V+QEQK+F+VVKNE  VEKVDVQYELERKIIEMLLLYGKEEQ+FEDLVLKENEEG+LILEPESSE+KVYEKI+LDLQEDEIELTN +FRNIY KLIA  NEKEDFTV+TFL+DLDQDM+SEISSILMEEEKY+LHDW RKDIYPKEKKM++AQLVSETILTLRCFLIKKRM SLQ+NT D+ EDNRET+EEIMNYLQLNNLL
Sbjct:  340 KICTFPEGEDPDSFSKHNELEDVLIYLKENSKDFIQFKAGLLAEEAVDDPIKRADTVRDIVNSISKIPDAIKREIYIQECAQIMNMSEGVLFSTLAQIGKKNQADASKRVRQEQKAFDVVKNEDVVEKVDVQYELERKIIEMLLLYGKEEQKFEDLVLKENEEGELILEPESSEIKVYEKIFLDLQEDEIELTNEKFRNIYLKLIAAFNEKEDFTVNTFLTDLDQDMISEISSILMEEEKYVLHDWGRKDIYPKEKKMVVAQLVSETILTLRCFLIKKRMASLQENTQDSEEDNRETIEEIMNYLQLNNLL 650          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A7Y2DIQ5_9FLAO (Toprim domain-containing protein n=1 Tax=Pricia sp. TaxID=2268138 RepID=A0A7Y2DIQ5_9FLAO)

HSP 1 Score: 462 bits (1189), Expect = 2.030e-159
Identity = 248/311 (79.74%), Postives = 277/311 (89.07%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            +VCTFP  EDPDSFAK NELE V  YL+ N+KDFIQFKAN+LA+EAA+DPIKRADTVRDIVNSI+KIPDAIKREIYIQECA IM VSEGVLFSTLAQIGKK   DA+K  K+E+K+F+VV+NE A EKVDVQYELERKIIEMLLLYG ++Q+FEDLVLKENE G+LILEPES   KVYEKIYLDLQEDEIEL N +FR IY KLIA LNE EDFT++TFLS+L+QDMV+EISSILMEEEKY+LH+W RKDIYPKEK+  IAQLVSETILTLRCFLIKKRML LQK+T +N +DNRETLEEIMNYLQLN LL
Sbjct:  160 RVCTFPEGEDPDSFAKNNELEEVIVYLQENAKDFIQFKANLLAQEAANDPIKRADTVRDIVNSISKIPDAIKREIYIQECAHIMNVSEGVLFSTLAQIGKKGLADASKQAKEERKTFDVVRNEKATEKVDVQYELERKIIEMLLLYGSKKQEFEDLVLKENESGNLILEPESLNAKVYEKIYLDLQEDEIELANERFRAIYYKLIAALNENEDFTINTFLSELEQDMVAEISSILMEEEKYVLHNWERKDIYPKEKEAGIAQLVSETILTLRCFLIKKRMLVLQKDTQENEQDNRETLEEIMNYLQLNKLL 470          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A3B0BZD5_9FLAO (DNA primase n=1 Tax=Ulvibacterium marinum TaxID=2419782 RepID=A0A3B0BZD5_9FLAO)

HSP 1 Score: 463 bits (1191), Expect = 3.360e-157
Identity = 247/311 (79.42%), Postives = 272/311 (87.46%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            K+CTFP  EDPDSFAK NELE V  YL+ N+KDFIQFKAN+LAEEA++DPIKRA+TVRDIVNSIAKIPDAIKREIYIQECA IM VSE VLFSTLAQIGKK+  DA K  K EQK+F+VVKN+V VEKVDVQYELERKIIEMLLLYG ++Q+FEDLVLKENEEGDLILEPES E KVYEKIYLDLQEDEIELTN QFRNIY KLI +LNE EDF++ TF+SDLDQ MV EISSILMEEEKY LH+W RKDIYPK+KK  + QLVSETILTLRC+LIKKRM +LQ NT +N  +N ETLEEIMNYLQLN LL
Sbjct:  340 KICTFPEGEDPDSFAKNNELEEVLQYLQENAKDFIQFKANLLAEEASNDPIKRAETVRDIVNSIAKIPDAIKREIYIQECAQIMNVSENVLFSTLAQIGKKEVADAAKKAKPEQKAFDVVKNQVTVEKVDVQYELERKIIEMLLLYGNDQQEFEDLVLKENEEGDLILEPESLEAKVYEKIYLDLQEDEIELTNEQFRNIYYKLIEQLNENEDFSIRTFISDLDQKMVEEISSILMEEEKYALHNWERKDIYPKDKKTGVGQLVSETILTLRCYLIKKRMEALQNNTHENNGNNNETLEEIMNYLQLNKLL 650          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A0F9Q9N3_9ZZZZ (Toprim domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9Q9N3_9ZZZZ)

HSP 1 Score: 452 bits (1162), Expect = 1.340e-155
Identity = 242/311 (77.81%), Postives = 273/311 (87.78%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            KVCTFP  EDPDSFAK NELEV++ YL +N+KDFIQFKAN+LA+EAA+DPIKRA+TVRDIVNSIAKIPDAIKREIYIQECA IM VSEGVLFSTLAQ+ KK   D+TK  +Q+QK+F+VVKNE  VEKVDVQYELERKIIE+LLLYGKE Q FEDLVLKEN+ GDLILEP S E KVYEKIYLDLQEDEIEL N  FR IY KLI  LNE +DF++++FLSDLDQ++VSEISSILMEEEKY+LHDW RKDIYPKEK   +AQLVSETILTLRCFLIKKRML+LQ +T ++ +D+RETLEEIMNYL LN LL
Sbjct:  141 KVCTFPEGEDPDSFAKNNELEVLEAYLVDNAKDFIQFKANLLAKEAANDPIKRAETVRDIVNSIAKIPDAIKREIYIQECAQIMNVSEGVLFSTLAQMNKKTVADSTKNTEQKQKAFDVVKNESTVEKVDVQYELERKIIELLLLYGKEVQNFEDLVLKENDAGDLILEPLSLESKVYEKIYLDLQEDEIELANEHFRGIYYKLIEALNESDDFSINSFLSDLDQELVSEISSILMEEEKYVLHDWGRKDIYPKEKGAGVAQLVSETILTLRCFLIKKRMLALQNDTQESTDDHRETLEEIMNYLNLNKLL 451          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A1G7GNX9_9FLAO (DNA primase n=3 Tax=root TaxID=1 RepID=A0A1G7GNX9_9FLAO)

HSP 1 Score: 458 bits (1178), Expect = 3.090e-155
Identity = 246/311 (79.10%), Postives = 272/311 (87.46%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            KVCTFP  EDPDSFAK NELE VQ YL +N+KDFIQFKAN+LAEEAA+DPIKRA+TVRDIVNSIAKIPD IKREIYIQECA IM VSEGVLFSTLAQI  K  TD  K  +QEQK+F+VVKNE  VEKVDVQYELERKIIE+LLLYG EEQ+FEDLVLKEN+ GDLILEP S + KVYEKIYLDLQEDEIEL N  FR+IY KLI  LNE +DF+++TFLSDLDQ MVSEISSILMEEEKY+LH+W RKDIYPKEK+  +AQLVSETILTLRCFLIKKRML+LQ +T ++AED+RETLEEIMNYL LN LL
Sbjct:  340 KVCTFPEGEDPDSFAKNNELEEVQKYLADNAKDFIQFKANLLAEEAANDPIKRAETVRDIVNSIAKIPDPIKREIYIQECAHIMNVSEGVLFSTLAQINMKDATDTAKKAQQEQKAFDVVKNETTVEKVDVQYELERKIIEILLLYGNEEQKFEDLVLKENDAGDLILEPLSLDAKVYEKIYLDLQEDEIELANEHFRDIYYKLIEALNENDDFSINTFLSDLDQKMVSEISSILMEEEKYVLHNWERKDIYPKEKEAGVAQLVSETILTLRCFLIKKRMLALQSDTQESAEDHRETLEEIMNYLNLNKLL 650          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A1G9PQ54_9FLAO (DNA primase n=1 Tax=Kriegella aquimaris TaxID=192904 RepID=A0A1G9PQ54_9FLAO)

HSP 1 Score: 454 bits (1168), Expect = 1.030e-153
Identity = 242/313 (77.32%), Postives = 277/313 (88.50%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQK--SFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            KVC+FP  EDPDS+AK++  E V+ YL+ NSKDFIQFKAN+LA+EAA+DPIKRA+TVRDIVNSIAK+PDAIK+EIYIQECA IM VSEGVLF+TLAQI KK++TD +K   QEQK  +F VV+NE AVEKVDVQYELERKIIEMLLLYG E ++FEDLVLKENEEGDLILEPES E KVYEKIYLDLQEDEIEL N+QFRNIY KLI ELNEKE+F++STFLS+LDQD+V+EISSI+MEEEKY LH+W RKDIYPK+K+  +AQLVSETILTLRCFLIKKRM +LQ  T ++  DNRETLEEIMNYLQLN LL
Sbjct:  340 KVCSFPEGEDPDSYAKKHAFEEVKTYLEENSKDFIQFKANLLAKEAANDPIKRAETVRDIVNSIAKVPDAIKKEIYIQECAQIMNVSEGVLFTTLAQISKKERTDTSKREYQEQKEKAFAVVRNEEAVEKVDVQYELERKIIEMLLLYGNESEEFEDLVLKENEEGDLILEPESLESKVYEKIYLDLQEDEIELANVQFRNIYYKLIEELNEKEEFSISTFLSELDQDLVAEISSIMMEEEKYTLHNWERKDIYPKDKRKGVAQLVSETILTLRCFLIKKRMFALQNETKESLTDNRETLEEIMNYLQLNKLL 652          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: UPI00126A6BFF (DNA primase n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI00126A6BFF)

HSP 1 Score: 442 bits (1138), Expect = 3.480e-149
Identity = 242/312 (77.56%), Postives = 267/312 (85.58%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAE-DNRETLEEIMNYLQLNNLL 933
            KVC+FP  EDPDSFAK NELE V  YL+ NSKDFIQFKA++LA EAA+DPIKRADTVRDIVNSIAKIPDAIKREIYIQECA IM VSE VLFSTLAQIGKK+ TDA K   Q QK+FEVVKNE +VEKVDVQYELERKIIEMLLLYG +E+ FEDLVLKEN++G+L LEPES   KVYEKIYLDLQEDEIEL N  FR IY KLI ELN  EDF++++F+++LDQ+ +SEISSILMEEEKY LH+W RKDIYPK KK  +AQLVSETILTLRCFLIKKRM SLQKNT +  E DNRETLEEIMNYL LN LL
Sbjct:  340 KVCSFPEGEDPDSFAKDNELEEVAAYLEQNSKDFIQFKAHLLAREAANDPIKRADTVRDIVNSIAKIPDAIKREIYIQECAHIMNVSEAVLFSTLAQIGKKEITDAAKEQTQRQKAFEVVKNEASVEKVDVQYELERKIIEMLLLYGDKEEAFEDLVLKENDQGNLELEPESVVAKVYEKIYLDLQEDEIELANAHFREIYYKLIEELNANEDFSINSFMTELDQETISEISSILMEEEKYRLHNWERKDIYPKGKKTGVAQLVSETILTLRCFLIKKRMASLQKNTQEETESDNRETLEEIMNYLNLNKLL 651          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A1M6JKH6_9FLAO (DNA primase n=1 Tax=Pseudozobellia thermophila TaxID=192903 RepID=A0A1M6JKH6_9FLAO)

HSP 1 Score: 440 bits (1131), Expect = 3.850e-148
Identity = 232/311 (74.60%), Postives = 269/311 (86.50%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            KVCTFP  EDPDSFAK NELE +  YL+ N+KDFIQFKAN+LA+EAA+DPIKRA+TVRDIVNSIAKIPD IK+EIYIQECA IM VSE VLFSTLAQIGKK+ T+A+K  +QEQK+F+VVKN+  VEKVDVQYELERKIIE+LLLYG   ++FEDLVLKE+E G+L+LEPES E KVYEKIYLDLQEDEIEL N +FR IY KLI  LN+ E+F++STFL  LDQ+MVSE+SSI+MEEEKY LH+W RKDIYPK+KK+ +AQL SETILTLRCFLIKKRM +LQ  T +  +DNRETLEEIMNY+QLN LL
Sbjct:  340 KVCTFPEGEDPDSFAKNNELEDIVGYLEGNAKDFIQFKANLLAKEAANDPIKRAETVRDIVNSIAKIPDGIKQEIYIQECAGIMNVSESVLFSTLAQIGKKESTEASKKQRQEQKAFDVVKNDATVEKVDVQYELERKIIEILLLYGNNTEKFEDLVLKESETGELVLEPESVEAKVYEKIYLDLQEDEIELANERFRTIYYKLIEALNQSENFSLSTFLGSLDQEMVSEVSSIMMEEEKYTLHNWERKDIYPKDKKIGVAQLTSETILTLRCFLIKKRMSALQGETREGTQDNRETLEEIMNYIQLNKLL 650          
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Match: A0A7X2ZTD3_9FLAO (DNA primase n=14 Tax=Zobellia TaxID=112040 RepID=A0A7X2ZTD3_9FLAO)

HSP 1 Score: 439 bits (1130), Expect = 5.130e-148
Identity = 238/311 (76.53%), Postives = 269/311 (86.50%), Query Frame = 1
Query:    1 KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDPIKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGKKKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEEQQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNIYQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKDIYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEEIMNYLQLNNLL 933
            KVCTFP  EDPDSFAK N LE VQ YL+  S+DFIQFKA +LA+EAA+DPIKRADTVRDI+ SI+KIPDAIKREIYIQECA+IMKVSEGVLF+TLAQ+GKK  +DA K  KQEQK+F+VVKNEV  EKVDVQY LERKIIE+LLLYG E+Q+FEDLVLKE+E GDL+LEPES E KVYEKI+LDLQ+DEIEL N QFR IY KLI  LN+ EDFT+S FLS LDQ +VSE+SSILMEEEKY LH W RKDIYPK KK+ +AQLVSETILTLRCFLIKKRM +LQ NT ++ +D+RETLEEIMNYLQLN LL
Sbjct:  340 KVCTFPEGEDPDSFAKNNALEDVQLYLEEKSQDFIQFKAGLLAQEAANDPIKRADTVRDIIQSISKIPDAIKREIYIQECANIMKVSEGVLFTTLAQMGKKGSSDAPK--KQEQKAFDVVKNEVPQEKVDVQYLLERKIIELLLLYGDEKQEFEDLVLKESESGDLVLEPESIEAKVYEKIFLDLQDDEIELANEQFRKIYYKLIEALNQDEDFTISVFLSGLDQQLVSEVSSILMEEEKYTLHSWERKDIYPKAKKVGVAQLVSETILTLRCFLIKKRMTALQDNTKESQQDHRETLEEIMNYLQLNKLL 648          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15687.3286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S3PP63_9FLAO1.570e-17385.85DNA primase n=1 Tax=Maribacter algarum TaxID=25781... [more]
A0A3B0TTX6_9ZZZZ2.920e-17184.89DNA primase n=1 Tax=hydrothermal vent metagenome T... [more]
A0A7Y2DIQ5_9FLAO2.030e-15979.74Toprim domain-containing protein n=1 Tax=Pricia sp... [more]
A0A3B0BZD5_9FLAO3.360e-15779.42DNA primase n=1 Tax=Ulvibacterium marinum TaxID=24... [more]
A0A0F9Q9N3_9ZZZZ1.340e-15577.81Toprim domain-containing protein (Fragment) n=1 Ta... [more]
A0A1G7GNX9_9FLAO3.090e-15579.10DNA primase n=3 Tax=root TaxID=1 RepID=A0A1G7GNX9_... [more]
A0A1G9PQ54_9FLAO1.030e-15377.32DNA primase n=1 Tax=Kriegella aquimaris TaxID=1929... [more]
UPI00126A6BFF3.480e-14977.56DNA primase n=1 Tax=Pelagihabitans pacificus TaxID... [more]
A0A1M6JKH6_9FLAO3.850e-14874.60DNA primase n=1 Tax=Pseudozobellia thermophila Tax... [more]
A0A7X2ZTD3_9FLAO5.130e-14876.53DNA primase n=14 Tax=Zobellia TaxID=112040 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15687contigE-siliculosus-1a_F_contig15687:1..933 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size933
Model size933
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko03032
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
COG Functional cat.L
EggNOG OGs1HWVC@117743,4NENT@976,COG0358@1,COG0358@2
EggNOG free text desc.RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GOsGO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576
KEGG Pathwayko03030,map03030
KEGG koko:K02316
Preferred namednaG
Seed eggNOG ortholog143224.JQMD01000002_gene2261
Seed ortholog evalue4.1e-122
Seed ortholog score444.5
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928079.9256642-CDS-E-siliculosus-1a_F_contig15687:0..9331622928079.9256642-CDS-E-siliculosus-1a_F_contig15687:0..933Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15687 1..933 -
1696318798.3685431-CDS-E-siliculosus-1a_F_contig15687:0..9331696318798.3685431-CDS-E-siliculosus-1a_F_contig15687:0..933Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15687 1..933 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15687.3286.1prot_E-siliculosus-1a_F_contig15687.3286.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15687 1..933 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15687.3286.1

>prot_E-siliculosus-1a_F_contig15687.3286.1 ID=prot_E-siliculosus-1a_F_contig15687.3286.1|Name=mRNA_E-siliculosus-1a_F_contig15687.3286.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=311bp
KVCTFPYVEDPDSFAKQNELEVVQDYLKNNSKDFIQFKANILAEEAADDP
IKRADTVRDIVNSIAKIPDAIKREIYIQECASIMKVSEGVLFSTLAQIGK
KKQTDATKAVKQEQKSFEVVKNEVAVEKVDVQYELERKIIEMLLLYGKEE
QQFEDLVLKENEEGDLILEPESSEVKVYEKIYLDLQEDEIELTNIQFRNI
YQKLIAELNEKEDFTVSTFLSDLDQDMVSEISSILMEEEKYILHDWTRKD
IYPKEKKMMIAQLVSETILTLRCFLIKKRMLSLQKNTVDNAEDNRETLEE
IMNYLQLNNLL
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mRNA from alignment at E-siliculosus-1a_F_contig15687:1..933-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15687.3286.1 ID=mRNA_E-siliculosus-1a_F_contig15687.3286.1|Name=mRNA_E-siliculosus-1a_F_contig15687.3286.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=933bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15687:1..933- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AAGGTTTGTACTTTTCCTTATGTCGAAGACCCAGATAGTTTCGCCAAACA AAATGAACTAGAGGTAGTTCAAGACTATCTTAAGAATAATTCTAAAGATT TCATTCAATTCAAAGCCAATATTTTAGCGGAAGAAGCTGCTGACGACCCT ATTAAACGCGCTGATACTGTTCGTGATATCGTGAATAGTATTGCTAAGAT TCCTGATGCGATAAAGCGGGAGATTTACATTCAAGAATGTGCAAGTATTA TGAAGGTTTCTGAAGGCGTTTTATTCAGTACCCTCGCTCAGATTGGGAAA AAGAAACAGACCGATGCTACCAAAGCTGTAAAGCAAGAGCAAAAGTCCTT TGAAGTGGTAAAGAATGAAGTTGCTGTTGAAAAGGTTGATGTACAGTATG AGCTAGAACGAAAGATTATAGAAATGCTTTTGTTATACGGAAAAGAGGAA CAACAGTTTGAAGATTTAGTTTTAAAGGAAAATGAGGAAGGTGATCTGAT TTTAGAACCTGAATCTTCTGAGGTAAAAGTATATGAGAAGATTTATTTAG ATCTTCAGGAGGATGAGATTGAACTTACCAATATACAATTCAGAAATATT TATCAGAAATTGATTGCTGAACTGAATGAAAAAGAAGATTTTACGGTAAG TACATTTCTATCTGATTTAGATCAAGATATGGTTTCTGAAATTTCTTCAA TCCTGATGGAAGAAGAGAAATACATTTTGCATGACTGGACGCGCAAAGAC ATTTATCCGAAAGAAAAGAAAATGATGATTGCACAATTGGTTAGTGAGAC GATATTGACACTTCGTTGTTTTTTGATCAAAAAGAGAATGCTAAGCTTGC AGAAAAATACAGTGGATAATGCAGAAGATAATCGTGAGACTTTAGAAGAG ATTATGAATTACTTACAGTTAAATAATCTTTTA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15687:1..933-

>mRNA_E-siliculosus-1a_F_contig15687.3286.1 ID=mRNA_E-siliculosus-1a_F_contig15687.3286.1|Name=mRNA_E-siliculosus-1a_F_contig15687.3286.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1866bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15687:1..933- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AAGGTTTGTACTTTTCCTTATGTCGAAGACCCAGATAGTTTCGCCAAACA
AAATGAACTAGAGGTAGTTCAAGACTATCTTAAGAATAATTCTAAAGATT
TCATTCAATTCAAAGCCAATATTTTAGCGGAAGAAGCTGCTGACGACCCT
ATTAAACGCGCTGATACTGTTCGTGATATCGTGAATAGTATTGCTAAGAT
TCCTGATGCGATAAAGCGGGAGATTTACATTCAAGAATGTGCAAGTATTA
TGAAGGTTTCTGAAGGCGTTTTATTCAGTACCCTCGCTCAGATTGGGAAA
AAGAAACAGACCGATGCTACCAAAGCTGTAAAGCAAGAGCAAAAGTCCTT
TGAAGTGGTAAAGAATGAAGTTGCTGTTGAAAAGGTTGATGTACAGTATG
AGCTAGAACGAAAGATTATAGAAATGCTTTTGTTATACGGAAAAGAGGAA
CAACAGTTTGAAGATTTAGTTTTAAAGGAAAATGAGGAAGGTGATCTGAT
TTTAGAACCTGAATCTTCTGAGGTAAAAGTATATGAGAAGATTTATTTAG
ATCTTCAGGAGGATGAGATTGAACTTACCAATATACAATTCAGAAATATT
TATCAGAAATTGATTGCTGAACTGAATGAAAAAGAAGATTTTACGGTAAG
TACATTTCTATCTGATTTAGATCAAGATATGGTTTCTGAAATTTCTTCAA
TCCTGATGGAAGAAGAGAAATACATTTTGCATGACTGGACGCGCAAAGAC
ATTTATCCGAAAGAAAAGAAAATGATGATTGCACAATTGGTTAGTGAGAC
GATATTGACACTTCGTTGTTTTTTGATCAAAAAGAGAATGCTAAGCTTGC
AGAAAAATACAGTGGATAATGCAGAAGATAATCGTGAGACTTTAGAAGAG
ATTATGAATTACTTACAGTTAAATAATCTTTTAAAGGTTTGTACTTTTCC
TTATGTCGAAGACCCAGATAGTTTCGCCAAACAAAATGAACTAGAGGTAG
TTCAAGACTATCTTAAGAATAATTCTAAAGATTTCATTCAATTCAAAGCC
AATATTTTAGCGGAAGAAGCTGCTGACGACCCTATTAAACGCGCTGATAC
TGTTCGTGATATCGTGAATAGTATTGCTAAGATTCCTGATGCGATAAAGC
GGGAGATTTACATTCAAGAATGTGCAAGTATTATGAAGGTTTCTGAAGGC
GTTTTATTCAGTACCCTCGCTCAGATTGGGAAAAAGAAACAGACCGATGC
TACCAAAGCTGTAAAGCAAGAGCAAAAGTCCTTTGAAGTGGTAAAGAATG
AAGTTGCTGTTGAAAAGGTTGATGTACAGTATGAGCTAGAACGAAAGATT
ATAGAAATGCTTTTGTTATACGGAAAAGAGGAACAACAGTTTGAAGATTT
AGTTTTAAAGGAAAATGAGGAAGGTGATCTGATTTTAGAACCTGAATCTT
CTGAGGTAAAAGTATATGAGAAGATTTATTTAGATCTTCAGGAGGATGAG
ATTGAACTTACCAATATACAATTCAGAAATATTTATCAGAAATTGATTGC
TGAACTGAATGAAAAAGAAGATTTTACGGTAAGTACATTTCTATCTGATT
TAGATCAAGATATGGTTTCTGAAATTTCTTCAATCCTGATGGAAGAAGAG
AAATACATTTTGCATGACTGGACGCGCAAAGACATTTATCCGAAAGAAAA
GAAAATGATGATTGCACAATTGGTTAGTGAGACGATATTGACACTTCGTT
GTTTTTTGATCAAAAAGAGAATGCTAAGCTTGCAGAAAAATACAGTGGAT
AATGCAGAAGATAATCGTGAGACTTTAGAAGAGATTATGAATTACTTACA
GTTAAATAATCTTTTA
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