mRNA_E-siliculosus-1a_F_contig1568.3284.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7G8A7_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A7_ECTSI) HSP 1 Score: 665 bits (1717), Expect = 4.230e-222 Identity = 617/850 (72.59%), Postives = 635/850 (74.71%), Query Frame = 1
Query: 208 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 2757
MVQADRKILALLYHSTGGP WSRS NWNTK+DIS+WRGVKVNSKGRVVQLDLSNNKL GVIPKELGNLRALTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +VGGPMSGESLGLWMARLRRQETARHGKKETTMDTISSP PG G +G + XX ++ A E +H+ +Q + R + LG + +D+ AGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCS+AKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQ+N GLPDCASDEDFMEWFAEE ASCVPN TGKSTPEEK GRRLGKRHIRMILAAVERGCLQ T AIEEKVEQLLKVVVPE G K SNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALEIENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALA KRKVKKTQEEVWQEMAESAAA+GQRPVTQDQLRRFAEVQDERHREHD NFSWVQGALGALKKKNRKWRR
Sbjct: 1 MVQADRKILALLYHSTGGPAWSRSHNWNTKADISSWRGVKVNSKGRVVQLDLSNNKLEGVIPKELGNLRALTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVGGPMSGESLGLWMARLRRQETARHGKKETTMDTISSPIPGARQAGSNGQGSXXXXXXXXXXX-------------------------------------------------------XXASKGACLTPGFESVLHHHQN-------------------------GCMQCIPRWQRRRQSLGS----YKQDRGYEH---------------------------------------------------------------AGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSVAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQSNGGLPDCASDEDFMEWFAEEAASCVPNNTGKSTPEEKTGRRLGKRHIRMILAAVERGCLQGTHAIEEKVEQLLKVVVPEAGAKPVSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALEIENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAFKRKVKKTQEEVWQEMAESAAASGQRPVTQDQLRRFAEVQDERHREHDANFSWVQGALGALKKKNRKWRR 703
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: A0A6H5JVV5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVV5_9PHAE) HSP 1 Score: 337 bits (863), Expect = 3.990e-97 Identity = 180/198 (90.91%), Postives = 185/198 (93.43%), Query Frame = 1
Query: 2158 EEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQLLKVVVPEVGVKRGSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALEIENGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAVKRKVKKTQEEVWQEMAESAAAAGQRPVTQDQLRRFAEVQDERHREHDTNFSWVQGALGALKKK-NRK 2748
E AGRRL KRHIRMILAAVERGCLQET AIEEKVE+L +VVVPE GVK SNSNAQERSFEQ PAAPAPSHDGGLDLHAEFAAMQAKLEALEIENGKLTRKVSTMEK+IPKPQGEPSDEVDVGGGQALA+KRKVKKTQEEVWQEMAESAAAA QRPVTQ+QLRRFAEVQDERHREHD N SWVQGALGALKKK NRK
Sbjct: 506 ERTAGRRLAKRHIRMILAAVERGCLQETHAIEEKVERLRRVVVPEAGVKPVSNSNAQERSFEQRPAAPAPSHDGGLDLHAEFAAMQAKLEALEIENGKLTRKVSTMEKNIPKPQGEPSDEVDVGGGQALALKRKVKKTQEEVWQEMAESAAAADQRPVTQEQLRRFAEVQDERHREHDANLSWVQGALGALKKKTNRK 703
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 287 bits (735), Expect = 1.240e-77 Identity = 190/489 (38.85%), Postives = 264/489 (53.99%), Query Frame = 1
Query: 1027 VGGPMSGESLGLWMARLRRQETA--RHGKKETTMDTISSPTPGGNLQGKHGAATERSSSLRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSDGRDAENLFRAQVASFAELDEITRDNHKTLKEVKRLLESTATGSGPTGADLTRADKLQELDRLVAMAKDLGEVASKHMEDKDMHRKELSLPPGSKAYYTTIRTGVCNAYLAGSVVGSRLVRTSKTGGMSVAGEFLNLLSGALPFVGGLAGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGI-GACEWSQNNSGLPDCASDEDFMEWFAEEVASCVPNKTG--KSTPEEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQLLKVVVPEVGVKRGSNSN------------AQERSFEQHPAAPAPS-HDGGLDLHAEFAAMQAKLEALEI 2439
GGP GESL W ARLR+QE A R K +S + G+ GK AT S SS D +++ +AQ++SF+ L + +HK L++V++L+E+ G L+ L EL+RLVAMA+DLG++ S+H+ ++D+ R+EL+LPPG KAYYT IRTG+CNAYLA SVV S LV TSKTG M AG+ L LS A+P V GLAG AA ALKAGD +QTRRV K+ D+APD+ +CC LA+ L L+L+D D T+ T+ H+ AG G G+ G C WSQ+ PD A++E M+WF EEVA PN K+T +AGR+LGKRH++ +L AV R CL+ T +EKV+ L+ +++PE + GS S+ AQ S + H AA P+ DG + AA+ ++ ++ +
Sbjct: 340 TGGPTRGESLDSWRARLRQQEQAAVREDTKAENPAARTSSSTQGDKPGKTDRATTEPIS---------------------------------------------------GSSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMG---GVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERVASMRM 774
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 284 bits (726), Expect = 2.650e-76 Identity = 222/639 (34.74%), Postives = 303/639 (47.42%), Query Frame = 1
Query: 1030 GGPMSGESLGLWMARLRRQETA---RHGKKETTMDTISSPTPGGNLQGKHGAATERSSSLRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSDGRDAENLFRAQVASFAELDEITRDNHKTLKEVKRLLESTATGSGPTGADLTRADKLQELDRLVAMAKDLGEVASKHMEDKDMHRKELSLPPGSKAYYTTIRTGVCNAYLAGSVVGSRLVRTSKTGGMSVAGEFLNLLSGALPFVGGLAGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGI-GACEWSQNNSGLPDCASDEDFMEWFAEEVASCVPNKTG--KSTPEEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQLLKVVVPEVGVKRGSNSN------------AQERSFEQHPAAPAPSH-DGGLDLHAEFAAMQAKLEALEIENGKLTRKVST------------------------------------------MEKSIPKPQGEPSDEVDVGGGQALAVKRKVKKTQEEVWQEMA-ESAAAAGQRPVTQDQLRRFAEV-------QDERHREHDTNFSWVQGALGALKKK 2739
GGP ESL W ARLR+QE A K E SS T G GA TE S SS D +++ +AQ++SF+ L + + +L++V +L+E+ G L L EL+RLVAMA+DLG++ S+H+ ++D+ R+EL+LPPG KAYYT IRTG+CNAYLA SVV S LV TSKTG M AG+ L LS A+P V GLAG AA ALKAGD +QTRRV K+ D+APD+ +CC LA+ L L+L+D D T+ T H+ AG G G+ G C WSQ+ PD A++E M+WF EEVA PNK K+T +AGR+LG RH++ +L AV R CL+ T +EKV+ L+ +++PE K GS S+ AQ S + H AA P+ DG + AA+ ++ ++ I ++ K + K +P + D AL ++ V +T + + E A E A AAG VT QL E+ DE HREHD S Q A+ + +K
Sbjct: 368 GGPAKDESLDSWRARLRQQEQAAVREDTKAENPAVRTSSSTQGDKPGKPDGATTEPISG----------------------------------------------------SSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMG---GVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHDASSAQPASRQSHAAATRPAAPDGAAKNDLDVAALMERMASMRIRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKILNKKVMKPGPDSDSLVASALKQRQAVTETAVDDFLERAQERAPAAGNDVVTLGQLTEAVELLKEVHSKYDELHREHDAKLSRFQRAVDRITRK 951
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI) HSP 1 Score: 276 bits (705), Expect = 4.320e-76 Identity = 188/519 (36.22%), Postives = 273/519 (52.60%), Query Frame = 1
Query: 1351 SSSDGRDAENLFRAQVASFAELDEITRDNHKTLKEVKRLLESTATGSGPTGADLTRADKLQELDRLVAMAKDLGEVASKHMEDKDMHRKELSLPPGSKAYYTTIRTGVCNAYLAGSVVGSRLVRTSKTGGMSVAGEFLNLLSGALPFVGGLAGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQNNSGLPDCASDEDFMEWFAEEVASCVPNKTGKSTPEEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQLLKVVVPEVGVKRGSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALE---------------------------------IENGK----------------LTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAVKRKVKKTQEEVWQEMAESAA-AAGQRPVTQDQLRRFAEVQDERHREHDTNFSWVQGALGALKKKNRKWRR 2757
S + + + RAQ +S A L + R+N + L++++R++E+T S +L+ + L LV M+ LGEVA KH ED + RKEL+LPP SK YY+ +R+G+C AYLA SV+ S V TSKTGGM G L L+SGA+P +GGL A +AL+AGD +QTRR++K+T +APD VECCSLA+ L L+LTD L + T D V++ AG G G G GA +P S+ED ++ EEV + N G G+RLGK+H+R +L A++ GCL + +K++ LL ++PE K + + + P A A +HD GL AEFAA+QA+L AL+ +++G+ L RKV +E+ +P+ EP D+VD GG AL + V +T + + AA AA PVT + R F +Q+E+HREH+ ++G + K RK RR
Sbjct: 154 SPGKAEEVDPMVRAQFSSSAGLGPLIRENPEALEDIQRVIEATTVRSIHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAG-GSGCGRGA-------DMMPGDMSEEDVFKYLLEEVTAYERNDHG--------GKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXXLERKVKKLEEHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAADHHPVTVSEQREFEALQNEKHREHEARLRELEGQIS--KATIRKGRR 654
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 284 bits (726), Expect = 2.550e-75 Identity = 166/378 (43.92%), Postives = 235/378 (62.17%), Query Frame = 1
Query: 1354 SSDGRDAENLFRAQVASFAELDEITRDNHKTLKEVKRLLESTATGSGPTGADLTRADKLQELDRLVAMAKDLGEVASKHMEDKDMHRKELSLPPGSKAYYTTIRTGVCNAYLAGSVVGSRLVRTSKTGGMSVAGEFLNLLSGALPFVGGLAGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGI-GACEWSQNNSGLPDCASDEDFMEWFAEEVASCVPNKTG--KSTPEEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQLLKVVVPEVGVKRGSNSN------------AQERSFEQHPAAPAPS-HDGGLDLHAEFAAMQAKLEALEI 2439
SS D +++ +AQ++SF+ L + HK+L++V++L+E+ G L+ L E++RLVAMA+DLG + S+H+ ++D+ R+EL+LPPG KAYYT IRTG+CNAYLA SVV S LV TSKTG M AG+ L LS A+P V GLAG AA ALKAGD +QTRRV K+ D+APD+ +CC LA+ L L+L+D D T+ T+ H+ AG G G+ G C WSQ+ PD A++E M+WF EEVA PN K+TP +AGR+LG RH++ +L AV R CL+ T +EKV+ L+ +++PE + GS S+ AQ S + H AA P+ DG + AA+ ++ ++ I
Sbjct: 612 SSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMG---GVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRERLNHDASSAQPASRQSHAAATRPAVPDGAPKSDIDVAALMERMASMRI 986
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI) HSP 1 Score: 277 bits (709), Expect = 5.930e-75 Identity = 191/519 (36.80%), Postives = 269/519 (51.83%), Query Frame = 1
Query: 1351 SSSDGRDAENLFRAQVASFAELDEITRDNHKTLKEVKRLLESTATGSGPTGADLTRADKLQELDRLVAMAKDLGEVASKHMEDKDMHRKELSLPPGSKAYYTTIRTGVCNAYLAGSVVGSRLVRTSKTGGMSVAGEFLNLLSGALPFVGGLAGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQNNSGLPDCASDEDFMEWFAEEVASCVPNKTGKSTPEEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQLLKVVVPEVGVKRGSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALE---------------------------------IENGK----------------LTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAVKRKVKKTQEEVWQEMAESAA-AAGQRPVTQDQLRRFAEVQDERHREHDTNFSWVQGALGALKKKNRKWRR 2757
S + + LFRAQ+ S A LD + R+N L+ ++ +E GS +L + L LV M+ LGEVA +H ED ++ RKEL+LPP SKAYYT IRTG+C AYLA S + S V TSKTGGM G L L+S A+P +GGL A +AL+AGD +QTRR++K+T +APD VECCSLA+ L L+LTD L + T D V++ AG G G G GA +P S+ED ++ EEV + N G G+RLGKRH+R +L A++ GCL + +K++ LL ++PE K + + + P A A +HD GL AEFAA+QA+L AL+ +++G+ L RKV +E+ +P+ EP D+VD GG AL + V +T + + AA A PVT + R F +QDE+HREH+ ++G + +K R+ RR
Sbjct: 349 SPEKAEEVDRLFRAQLVSSAGLDSLIRENPAALENIQLAIERQVAGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAG-GSGCGRGA-------DMMPGDMSEEDVFKYLLEEVTADERNDHG--------GKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTPKEVMVRSPPAGAAAHDSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXELERKVKKLEQHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAVDHHPVTVSEQREFEALQDEKHREHEARLRELEGQI--IKATIRQGRR 849
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 263 bits (673), Expect = 3.180e-70 Identity = 169/448 (37.72%), Postives = 242/448 (54.02%), Query Frame = 1
Query: 1351 SSSDGRDAENLFRAQVASFAELDEITRDNHKTLKEVKRLLESTATGSGPTGADLTRADKLQELDRLVAMAKDLGEVASKHMEDKDMHRKELSLPPGSKAYYTTIRTGVCNAYLAGSVVGSRLVRTSKTGGMSVAGEFLNLLSGALPFVGGLAGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQNNSGLPDCASDEDFMEWFAEEVASCVPNKTGKSTPEEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQLLKVVVPEVGVKRGSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALEIE-----------------------------------NGKLTRKVSTMEKSIPKPQGEPSDEVDVGGGQALAVKRKVKKTQEEVWQ 2589
S + + LF AQ++S A LD + R+ K L++++R++EST GS L+ D ++L LV M+ LGEVA +H ED ++ RKEL+LP S AYY+ +R+G+C AYLA SV+ S V TSKTGGM AG + L+S A+P VGGL A +AL+AGD+ +QTRR++K+T +A DAV+CC LA+ L L+LTD L ++ T+ + V + AG GA + P S+ED E+ EEVAS N G G RLGK+H+R +L A++RG L + E+K+E L+ ++PE + + + + P P+HDGGL AEF AMQA LEAL+ + N +L KV+ MEK +P+ EP D + G Q L K ++K+ E WQ
Sbjct: 399 SPGKAEEMDRLFSAQLSSSAGLDSLIREKPKALEDIQRVIESTVAGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGGADM-----------TPGDMSEEDVFEYLLEEVASYKRNDHG--------GVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTPKEVIVRSPPVVTPAHDGGLPSRAEFTAMQAALEALKFDRETQQXXXXXXXXXXXXXXXXXXXXXXXXXAVESRNKQLREKVAAMEKRVPEGDCEPCDRGNAEGRQVLQQKLEMKEDLETFWQ 827
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 263 bits (673), Expect = 9.720e-69 Identity = 156/363 (42.98%), Postives = 226/363 (62.26%), Query Frame = 1
Query: 1351 SSSDGRDAE--NLFRAQVASFAELDEITRDNHKTLKEVKRLLESTATGSGPTGADLTRADKLQELDRLVAMAKDLGEVASKHMEDKDMHRKELSLPPGSKAYYTTIRTGVCNAYLAGSVVGSRLVRTSKTGGMSVAGEFLNLLSGALPFVGGLAGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQNNSGLPDCASDEDFMEWFAEEVASCVPNKTGKSTPEEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQLLKVVVPEVGVKRGSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEAL 2433
S S G+ AE LFR Q++S A LD + ++N + L++++R++++ A G +L+ ++ ++L L+ MAK LGEVA H EDKD+ RKEL+L P SKAYYT +R+G+CNAYLA SV+ S V TSKTGGM G L LLS A+P + GLAG A +AL+ GD+ +QTRR+ K+T +A D +ECCSLA+ L L+LTD L D+T + H+ AG G+G G ++ LPD ++D E EEVA + G G+RLGK+H+R +L A++RGCL + I++K+E LL ++PE ++ S + + Q P A AP+H+G L A+ AA+QA +EAL
Sbjct: 464 SLSPGKAAEVDRLFRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGMNGGSGSG-----RDADILPDIIIEDDVFEHLLEEVARYERSDHG--------GKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETSISPKEVIVQSPPALAPTHNGTLPSMADIAALQAAVEAL 813
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Match: D7FHA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA2_ECTSI) HSP 1 Score: 253 bits (646), Expect = 1.510e-67 Identity = 170/492 (34.55%), Postives = 250/492 (50.81%), Query Frame = 1
Query: 1018 DRLVGGPMSGESLGLWMARLRRQETARHGKKETTMDTISSPTPGGNLQGKHGAATERSSSLRNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSDGRDAENLFRAQVASFAELDEITRDNHKTLKEVKRLLESTATGSGPTGADLTRADKLQELDRLVAMAKDLGEVASKHMEDKDMHRKELSLPPGSKAYYTTIRTGVCNAYLAGSVVGSRLVRTSKTGGMSVAGEFLNLLSGALPFVGGLAGFAAEALKAGDNNIQTRRVIKMTDLAPDAVECCSLAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGIGACEWSQNNSGLPDCASDEDFMEWFAEEVASCVPNKTGKSTPEEKAGRRLGKRHIRMILAAVERGCLQETLAIEEKVEQ----------LLKVVVPEVGVKRGSNSNAQERSFEQHPAAPAPSHDGGLDLHAEFAAMQAKLEALEIENGKLTRK 2463
+RL GGP GE L W RL + + +P P G+ G+H A ER +R+P S +A+ +F+AQ++S A LD + R+N L++++R++E++ GS +L+ ++L LV M+ LGEV KH ED D+ R+EL+LPP SKAYYT +RTG+CNAYLA SV+ S V TSKTGGM AG L ++S A+P VGG G A +A+K+GD+ +QTRR++K+T +A DA+ECCSLA+ L L+L L ++ + + AG G+G G Q + LP S+ D E+ +EVASC N G G+RLGK+H+R +L AV+RGCL E+K LL ++PE ++ + S+ + + +HD G A+FAA+QA +E L+ +N +L K
Sbjct: 245 NRLTGGPAYGEGLDSWRERLAPKHKTKLQIFRGDRMEKDAPVPPGSRNGRHEAVGER---VRSPEHASL------------------------------------------SPEKAEEADRVFKAQLSSSAGLDSLIRENPGALEDIQRVIEASVAGSVSVDNELSDMQSRRKLGTLVTMSTALGEVVLKHTEDMDVKREELTLPPFSKAYYTAVRTGICNAYLAASVIDSDWVSTSKTGGMGKAGAALKVMSRAIPVVGGPTGLAGKAMKSGDHYLQTRRLVKITAMAHDAIECCSLARRLALQLAGGLRNDANAGANEVDHIRADITAGMNGGSGSG-----QGPNSLPAIMSEGDVFEYVLKEVASCGHNDHG--------GKRLGKKHLRKLLKAVQRGCLDGLSCTEQKARTRMSSRQQMAVLLLEILPEADIRHAATSSLLKEVIVKSLPVVGAAHDSGSPSMADFAALQAAVEELKSDNKQLRDK 678 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1568.3284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1568.3284.1 >prot_E-siliculosus-1a_F_contig1568.3284.1 ID=prot_E-siliculosus-1a_F_contig1568.3284.1|Name=mRNA_E-siliculosus-1a_F_contig1568.3284.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=851bp MVQADRKILALLYHSTGGPTWSRSQNWNTKSDISTWRGVKVNSKGRVVQLback to top mRNA from alignment at E-siliculosus-1a_F_contig1568:12934..26850- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1568.3284.1 ID=mRNA_E-siliculosus-1a_F_contig1568.3284.1|Name=mRNA_E-siliculosus-1a_F_contig1568.3284.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=13917bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1568:12934..26850- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1568:12934..26850- >mRNA_E-siliculosus-1a_F_contig1568.3284.1 ID=mRNA_E-siliculosus-1a_F_contig1568.3284.1|Name=mRNA_E-siliculosus-1a_F_contig1568.3284.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5106bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1568:12934..26850- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |