mRNA_E-siliculosus-1a_F_contig1567.3279.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1567.3279.1
Unique NamemRNA_E-siliculosus-1a_F_contig1567.3279.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: D7G8J2_ECTSI (Aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J2_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 1.330e-144
Identity = 226/236 (95.76%), Postives = 230/236 (97.46%), Query Frame = 1
Query:   13 LEAISNTPILRTEDETAAADDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXX-DAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTPDTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAMLVSS 717
            ++AISNTPILRTED+TAA DDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXX DAVQINVHVVRGV LKGVEFALEFATRAFELFSKLFS RFPIPK+DLIGLPQMHGLGMENFGAITCLQEYLVVTPDTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAML  S
Sbjct:  106 IQAISNTPILRTEDDTAAPDDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXXXDAVQINVHVVRGVDLKGVEFALEFATRAFELFSKLFSVRFPIPKLDLIGLPQMHGLGMENFGAITCLQEYLVVTPDTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAMLADS 341          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A835YII6_9STRA (Aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII6_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.050e-43
Identity = 71/129 (55.04%), Postives = 100/129 (77.52%), Query Frame = 1
Query:  307 LKGVEFALEFATRAFELFSKLFS-ARFPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTPDTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEV 690
            ++   +ALE    AFE FS LF  A +P+ K+DLI +P M G+GMEN+GAIT  Q+++++  D  F RRRR ARL+CHE+SH WYG+L TP SFD+LWLKEG+AR+FE++A+DAL+PSY VW++++ E+
Sbjct:  140 VEDARYALELTRAAFEFFSALFEGAPYPLNKLDLICVPAMRGIGMENYGAITLRQDFMLLHADAAFARRRRAARLVCHEVSHQWYGNLATPRSFDDLWLKEGLARYFEFVALDALEPSYGVWSHYVDEL 268          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A0G4GQC2_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GQC2_VITBC)

HSP 1 Score: 149 bits (377), Expect = 1.310e-37
Identity = 92/262 (35.11%), Postives = 134/262 (51.15%), Query Frame = 1
Query:    1 VPRHLEAISNTPILRTEDETAAADDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXXDAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSAR--------FPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTPDTT-FVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVD--------------ALDPSYHVWNNFMSEVFVQAMLVSS 717
            +P  ++A++   I  T   TAA +    +Y V  VVF+PTP +P Y +GF++G F  +  R           V +P              V +   +  G G  G+ FA E    AF  F   F           + + K+DL+G+    G+G+ENFG IT   ++  V+   T + RRRRI+RLICHE+SHMW+GD +TP++FDEL+LKEG+AR+ E++A+D               L     VW  F+ EVF +AML  S
Sbjct:  497 IPPRVQAMARRSITNTSTSTAAYEG---KYRV--VVFEPTPRLPCYAYGFYIGHFGSLGGR-----------VEVPVPANTPGCAEGRRTVDVTAWMPHGRG-SGLRFAHEVGMSAFGYFENTFGGGLGDGCGVPYALSKLDLLGIKPHRGIGLENFGCITFDIDFFSVSDLMTGWSRRRRISRLICHEVSHMWFGDCLTPHTFDELFLKEGVARYLEFVALDDILFGSPASRPPQEQLTARNWVWVTFLLEVFFEAMLDDS 741          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A7S2UHQ9_9STRA (Aminopeptidase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHQ9_9STRA)

HSP 1 Score: 144 bits (364), Expect = 6.710e-36
Identity = 80/242 (33.06%), Postives = 127/242 (52.48%), Query Frame = 1
Query:    1 VPRHLEAISNTPIL--RTEDETAAADDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXXDAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFGAITCLQ-EYLVVTPDTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAMLVSS 717
            +PR LE ISNTPI+   T   T  ++DG     V T  F  TP M TY+    +G+F  ++  +  T                         +Q +V+ V G   +G +F L+ AT+  +L+++LF   +P+ K DL+ +P      MEN+G +T  + + LV    T+   +R IAR +CHE++H W+G+LVT + + +LWL EG ARF E++ +D L P +  W  F+  V+  A+ + S
Sbjct:  189 MPRGLECISNTPIVSQHTYTTTNNSNDGPA-LLVTTTTFGKTPLMSTYLLALVIGEFDVITTTSETTK------------------------IQTSVYTVPGKAHQG-QFCLDVATKCLDLYAQLFDVPYPLTKSDLLAIPDFAAGAMENWGCVTYREAKILVKEGSTSETMKRGIARTVCHELAHQWFGNLVTMDFWTQLWLNEGFARFMEFVGIDTLFPEWDAWTEFVQSVYGLALSLDS 404          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A0R3WEQ6_TAEAS (Peptidase_M1 domain-containing protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3WEQ6_TAEAS)

HSP 1 Score: 139 bits (349), Expect = 1.310e-35
Identity = 76/234 (32.48%), Postives = 127/234 (54.27%), Query Frame = 1
Query:   19 AISNTP-----ILRTEDETAAADDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXXDAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTPD-TTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQA 702
            A+SN P     ++ T +  +   DG C Y +  V F  TP M TY+    VGDF  +S+   ++    +S  S              +  ++ V+   G    G + AL+   ++   +SKLF + +P+PK+DL+ +P      MEN+G IT  +  L++ PD ++ + ++ +A  + HE+SHMW+G+LVT + + +LWL EG A + +YLAVD   P Y++WN F+S  ++ A
Sbjct:   57 ALSNMPEIYRNVIPTPEGCSEPSDG-CNYVI--VAFDCTPRMSTYLVAMVVGDFEYISSFVNLSGTSGASSSS--ESEIEGLTRVLPEKAEVRVYAPLGKCNFG-QHALKVVEKSLRFYSKLFGSNYPLPKLDLVAIPDFACSAMENWGLITYRETALLIDPDNSSLLSKQSVALTVAHEVSHMWFGNLVTLSWWTDLWLNEGFATWAQYLAVDHCFPEYNIWNKFVSSTYICA 284          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A485L5H1_9STRA (Aminopeptidase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5H1_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.670e-34
Identity = 79/236 (33.47%), Postives = 118/236 (50.00%), Query Frame = 1
Query:    4 PRHLEAISNTPILRTEDETAAADDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXXDAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTP-DTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAML 708
            P HL AISN  +L T  + +A    G     K   F  TP M TY+    VG+F CVSA                            + V +N++   G   +G EFAL  AT++   F+K F   +P+ K+D + +P      MEN+G +   +  L++ P  T+  +R ++A  + HE++H W+G+LVT   +  LWL EG A F EY AVD + P +H+W NF+ EV + A +
Sbjct:  163 PAHLTAISNMHVLSTSVQPSAHIFNGTE---KVWHFAETPIMSTYLVALVVGEFDCVSAYT-------------------------DEGVLVNIYCPLGKAAQG-EFALSVATKSLSFFTKAFGIPYPLKKLDNLAIPDFAAGAMENWGCVLYRETALLIEPGQTSKAKRTQVALTVAHELAHQWFGNLVTMEWWTGLWLNEGFAHFMEYDAVDHIFPEWHMWENFVQEVTLDAAM 369          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A7S3UU77_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU77_HETAK)

HSP 1 Score: 134 bits (338), Expect = 1.460e-33
Identity = 82/241 (34.02%), Postives = 121/241 (50.21%), Query Frame = 1
Query:    4 PRHLEAISNTPILRTEDETAAAD--DGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXXDAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTPDTTFV-RRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAMLVSS 717
            P  L  +SNT  + TE   AA     GG     K   F  TP M TY+    VG+F  V A+   T                         VQ+ V+   G   +G  FAL+ A +A EL+ +L+   +P+ K DL+ +P      MEN+G +T  +  L+V P  + +  R+RIAR +CHE++H W+G+LVT   +  LWL EG AR+ E++AV ++ P +  W +F  EVF  A+ V +
Sbjct:   17 PVDLVCVSNTACVSTEVRAAAGPGGSGGGGRREKVWRFAATPVMSTYLVAVVVGEFDHV-AKFTRTG------------------------VQVTVYTPPGKSAQGT-FALDVACQALELYEELYGVPYPLTKSDLLAIPDFAAGAMENWGCVTYREARLLVEPGASSLDARKRIARTVCHELAHQWFGNLVTMEWWTHLWLNEGFARYMEFVAVASIFPGWDFWTDFDHEVFGTALRVDA 231          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A1Z5JB50_FISSO (Aminopeptidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JB50_FISSO)

HSP 1 Score: 137 bits (344), Expect = 3.210e-33
Identity = 78/242 (32.23%), Postives = 128/242 (52.89%), Query Frame = 1
Query:    1 VPRHLEAISNTPILRTEDETAAADDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVS--ARALMTAAVRSSDVSLPXXXXXXXXXXXXDAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTP-DTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAMLVSS 717
            +P HL+ ISNTP+  T    + + D   +   KT+ FQ TP M TY+  + +G F  VS  +R ++T                             V+ V G   +G +F L+ A++  + +  LF   +P+ K DL+ +P      MEN+G +T  +  ++V P  T+   +R IAR +CHE++H W+G+LVT + + +L+LKEG+ARF E++A++ L P + VW  F+  V   A+ + S
Sbjct:  225 IPAHLQCISNTPMAAT----STSYDSPSKLLFKTIQFQTTPLMSTYLLAWVIGRFDGVSTTSRHIVTT----------------------------VYTVEGKATQG-QFCLQVASKCLDYYQDLFQIPYPLTKSDLLAIPDFAAGAMENWGCVTYREAKILVDPIQTSESTKRAIARTVCHELAHQWFGNLVTMDWWTQLYLKEGVARFMEFVALEHLFPEWLVWVEFVQGVMGLALSLDS 433          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A0R3U6R0_MESCO (Aminopeptidase n=3 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3U6R0_MESCO)

HSP 1 Score: 136 bits (343), Expect = 4.210e-33
Identity = 79/232 (34.05%), Postives = 121/232 (52.16%), Query Frame = 1
Query:   19 AISNTP-ILRTEDET-AAADDGGCRYAVKTVVFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXXDAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTP-DTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAM 705
            A+SN P + RT   T A   D    +    + F  +P M TY+    VGDF  VS+                            + V++ V+   G    G E+ALE AT++   ++KLF   +P+PK+DLI +P      MEN+G IT  +  L++ P +++ + ++ +A  + HEI+HMW+G+LVT   ++ LWL EG A F EYLAVD   P Y +WN F+S  + +A+
Sbjct:  163 ALSNMPEVSRTVVPTPAGCPDPPDGHNYVKIRFDKSPIMSTYLVAMVVGDFEYVSSNV-------------------------ENGVEVRVYTPPGKKAFG-EYALEVATKSLPFYTKLFDCNYPLPKLDLIAIPDFAAGAMENWGLITYRETALLIDPKNSSLLSKQSVALTVAHEIAHMWFGNLVTMQWWNHLWLNEGFATFIEYLAVDHCFPDYDIWNLFISREYTKAL 368          
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Match: A0A2P6N789_9EUKA (Aminopeptidase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N789_9EUKA)

HSP 1 Score: 136 bits (342), Expect = 5.860e-33
Identity = 78/246 (31.71%), Postives = 126/246 (51.22%), Query Frame = 1
Query:    1 VPRHLEAISNTPILR---TEDETAAADDG-GCRYAVKTV--VFQPTPAMPTYVFGFWVGDFHCVSARALMTAAVRSSDVSLPXXXXXXXXXXXXDAVQINVHVVRGVGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFGAITCLQEYLVVTPDTTF-VRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAMLVSS 717
            VP  + A+SN P+++   T D +  AD   G +Y   +V   +  TP M TY+  + +G F  +S                             D  ++ V+   G    G  +AL+ + +    + K F   +P+PKMDLI +P      MEN+G +T  +  L++ P T+  V ++R+AR +CHEI+HMW+G+ VT   +  LWL EG ARF E+LAVD + P Y ++  F+++V+  A+ + S
Sbjct:  165 VPEGMTALSNMPVVQKRTTLDSSKEADQSRGLQYKAGSVHHTYAETPVMSTYLLAWVIGHFDYISGYT-------------------------QDHKEVRVYTPLGKSHLG-HYALQTSLQCLPFYEKFFEFEYPLPKMDLIAIPDFAAGAMENWGLVTYRETALLIDPQTSSTVTKQRVARTVCHEIAHMWFGNAVTMEWWTYLWLNEGFARFVEHLAVDHIYPEYDIFTQFVTDVYYLALGLDS 384          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8J2_ECTSI1.330e-14495.76Aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A835YII6_9STRA3.050e-4355.04Aminopeptidase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A0G4GQC2_VITBC1.310e-3735.11Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S2UHQ9_9STRA6.710e-3633.06Aminopeptidase n=1 Tax=Attheya septentrionalis Tax... [more]
A0A0R3WEQ6_TAEAS1.310e-3532.48Peptidase_M1 domain-containing protein n=1 Tax=Tae... [more]
A0A485L5H1_9STRA2.670e-3433.47Aminopeptidase n=1 Tax=Aphanomyces stellatus TaxID... [more]
A0A7S3UU77_HETAK1.460e-3334.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1Z5JB50_FISSO3.210e-3332.23Aminopeptidase n=2 Tax=Fistulifera solaris TaxID=1... [more]
A0A0R3U6R0_MESCO4.210e-3334.05Aminopeptidase n=3 Tax=Mesocestoides corti TaxID=5... [more]
A0A2P6N789_9EUKA5.860e-3331.71Aminopeptidase n=1 Tax=Planoprotostelium fungivoru... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1567contigE-siliculosus-1a_F_contig1567:28698..30204 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size717
Model size717
Exons3
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.E
EC3.6.1.1
EggNOG OGsCOG0308@1,KOG1046@2759
EggNOG free text desc.metalloaminopeptidase activity
KEGG Pathwayko00190,map00190
KEGG koko:K01507
Seed eggNOG ortholog2880.D7G8J2
Seed ortholog evalue1e-120
Seed ortholog score439.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1567.3279.1prot_E-siliculosus-1a_F_contig1567.3279.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1567 28698..30204 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928079.0535083-CDS-E-siliculosus-1a_F_contig1567:28697..291651622928079.0535083-CDS-E-siliculosus-1a_F_contig1567:28697..29165Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1567 28698..29165 +
1696318797.9554482-CDS-E-siliculosus-1a_F_contig1567:28697..291651696318797.9554482-CDS-E-siliculosus-1a_F_contig1567:28697..29165Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1567 28698..29165 +
1622928079.067474-CDS-E-siliculosus-1a_F_contig1567:29449..295871622928079.067474-CDS-E-siliculosus-1a_F_contig1567:29449..29587Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1567 29450..29587 +
1696318797.9645267-CDS-E-siliculosus-1a_F_contig1567:29449..295871696318797.9645267-CDS-E-siliculosus-1a_F_contig1567:29449..29587Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1567 29450..29587 +
1622928079.1072607-CDS-E-siliculosus-1a_F_contig1567:30093..302041622928079.1072607-CDS-E-siliculosus-1a_F_contig1567:30093..30204Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1567 30094..30204 +
1696318797.9721107-CDS-E-siliculosus-1a_F_contig1567:30093..302041696318797.9721107-CDS-E-siliculosus-1a_F_contig1567:30093..30204Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1567 30094..30204 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1567.3279.1

>prot_E-siliculosus-1a_F_contig1567.3279.1 ID=prot_E-siliculosus-1a_F_contig1567.3279.1|Name=mRNA_E-siliculosus-1a_F_contig1567.3279.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=239bp
VPRHLEAISNTPILRTEDETAAADDGGCRYAVKTVVFQPTPAMPTYVFGF
WVGDFHCVSARALMTAAVRSSDVSLPPPPPARLEEEEEDAVQINVHVVRG
VGLKGVEFALEFATRAFELFSKLFSARFPIPKMDLIGLPQMHGLGMENFG
AITCLQEYLVVTPDTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWL
KEGMARFFEYLAVDALDPSYHVWNNFMSEVFVQAMLVSS
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mRNA from alignment at E-siliculosus-1a_F_contig1567:28698..30204+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1567.3279.1 ID=mRNA_E-siliculosus-1a_F_contig1567.3279.1|Name=mRNA_E-siliculosus-1a_F_contig1567.3279.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1507bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1567:28698..30204+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTCCCGCGGCACCTCGAGGCCATCTCGAACACCCCGATACTGCGCACCGA AGACGAGACAGCAGCGGCAGATGATGGAGGCTGCCGTTATGCGGTCAAGA CAGTAGTGTTTCAGCCGACCCCGGCAATGCCCACATACGTTTTCGGTTTT TGGGTTGGGGATTTCCATTGTGTTTCCGCGCGAGCCTTGATGACCGCTGC CGTTCGGAGCAGCGACGTGTCCCTACCGCCGCCACCGCCGGCTCGTCTGG AGGAGGAGGAGGAGGACGCAGTCCAGATCAACGTGCACGTCGTTCGCGGG GTCGGTTTGAAAGGAGTGGAGTTCGCGTTGGAGTTTGCCACACGTGCTTT CGAGCTGTTCTCGAAGCTGTTCTCGGCCCGGTTCCCGATACCAAAGATGG ACCTAATTGGGCTGCCACAAATGCACGGGCTTGGCATGGAAAATTTCGGG GCGATCACCTGCCTGCAGGTGTGCATGTGTGTGTGTGTTGCGATCACCTG CCTGCTGGGGTACGTGTGTGAGTGTGGATACAGCATTATAGTCTACACGT TCAGGAACGTTGCTGGTAACTTCATTTTCGGATGCAACCCTTTTAGGGGA TCATCCACCGAGGACACTTGCTTTAACTCGTGAAAGTTATCGGTACATGG TGATAGAAAAGAGTATTTTGATATCACGGGCGTCGAACCCCACATGAATA GGTCGCTCTCCGTGTTCACGCTCGGTATCCCCGTTGTTCGCTCTGTCGGC AGGAATATCTGGTGGTTACACCCGACACGACGTTCGTGCGACGTCGGCGC ATCGCCCGACTTATTTGCCACGAGATCAGCCACATGTGGTACGGCGACCT GGTTACACCCAACAGCTTCGATGAGCTCTGGCTGAAAGAGGTGCGTTTGC TTCGTCTTGCACCGTCGTACATACGCGAAATCGTTTGCACCCAATAGCAA GGGCAACGATGCCGTGCCCAACGGCACGATCCTCGAGACATGGGGAGAGA CAACTTGGAAACTTTTTTTGTTGTTTTTACCACTCACTGCTGTTGATGTC CGTGGCGTGATGGTAGCCGTGCTGCTAAGGAACGCTTGTACATAGAGGCA GCACGGTCTTAACGAGCAGTGGATGTTTCAAGGGGCGTTGCTGACCTGTC TACAGATATATAAGCTATGTGATGAGGGTAGATGCGTTTTTTGTTTCAAG GGGTACCCTTACGAAACGGCCAGCGGTAGGGAAGCTGGGCCACGGATTAT GAGAGCGTGAGAGATATGTTGATCACCGACATCTGCAGCCGTTTTTGGCG AAGACTAAGCGTCTGTTTCTCCCATCCCTTCGTCTTCTTTCGTCCTACCC GCTTCACGCATGACAATGTGCGCCCCCCCCCCCCTTTATTTCGAAGGGTA TGGCACGTTTCTTCGAGTATCTAGCTGTCGACGCTCTGGACCCGTCGTAT CACGTGTGGAACAACTTCATGAGCGAGGTGTTCGTCCAGGCAATGCTGGT GAGTTCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1567:28698..30204+

>mRNA_E-siliculosus-1a_F_contig1567.3279.1 ID=mRNA_E-siliculosus-1a_F_contig1567.3279.1|Name=mRNA_E-siliculosus-1a_F_contig1567.3279.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1434bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1567:28698..30204+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTCCCGCGGCACCTCGAGGCCATCTCGAACACCCCGATACTGCGCACCGA
AGACGAGACAGCAGCGGCAGATGATGGAGGCTGCCGTTATGCGGTCAAGA
CAGTAGTGTTTCAGCCGACCCCGGCAATGCCCACATACGTTTTCGGTTTT
TGGGTTGGGGATTTCCATTGTGTTTCCGCGCGAGCCTTGATGACCGCTGC
CGTTCGGAGCAGCGACGTGTCCCTACCGCCGCCACCGCCGGCTCGTCTGG
AGGAGGAGGAGGAGGACGCAGTCCAGATCAACGTGCACGTCGTTCGCGGG
GTCGGTTTGAAAGGAGTGGAGTTCGCGTTGGAGTTTGCCACACGTGCTTT
CGAGCTGTTCTCGAAGCTGTTCTCGGCCCGGTTCCCGATACCAAAGATGG
ACCTAATTGGGCTGCCACAAATGCACGGGCTTGGCATGGAAAATTTCGGG
GCGATCACCTGCCTGCAGGTCCCGCGGCACCTCGAGGCCATCTCGAACAC
CCCGATACTGCGCACCGAAGACGAGACAGCAGCGGCAGATGATGGAGGCT
GCCGTTATGCGGTCAAGACAGTAGTGTTTCAGCCGACCCCGGCAATGCCC
ACATACGTTTTCGGTTTTTGGGTTGGGGATTTCCATTGTGTTTCCGCGCG
AGCCTTGATGACCGCTGCCGTTCGGAGCAGCGACGTGTCCCTACCGCCGC
CACCGCCGGCTCGTCTGGAGGAGGAGGAGGAGGACGCAGTCCAGATCAAC
GTGCACGTCGTTCGCGGGGTCGGTTTGAAAGGAGTGGAGTTCGCGTTGGA
GTTTGCCACACGTGCTTTCGAGCTGTTCTCGAAGCTGTTCTCGGCCCGGT
TCCCGATACCAAAGATGGACCTAATTGGGCTGCCACAAATGCACGGGCTT
GGCATGGAAAATTTCGGGGCGATCACCTGCCTGCAGGAATATCTGGTGGT
TACACCCGACACGACGTTCGTGCGACGTCGGCGCATCGCCCGACTTATTT
GCCACGAGATCAGCCACATGTGGTACGGCGACCTGGTTACACCCAACAGC
TTCGATGAGCTCTGGCTGAAAGAGGAATATCTGGTGGTTACACCCGACAC
GACGTTCGTGCGACGTCGGCGCATCGCCCGACTTATTTGCCACGAGATCA
GCCACATGTGGTACGGCGACCTGGTTACACCCAACAGCTTCGATGAGCTC
TGGCTGAAAGAGGGTATGGCACGTTTCTTCGAGTATCTAGCTGTCGACGC
TCTGGACCCGTCGTATCACGTGTGGAACAACTTCATGAGCGAGGTGTTCG
TCCAGGCAATGCTGGTGAGTTCCGGTATGGCACGTTTCTTCGAGTATCTA
GCTGTCGACGCTCTGGACCCGTCGTATCACGTGTGGAACAACTTCATGAG
CGAGGTGTTCGTCCAGGCAATGCTGGTGAGTTCC
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