mRNA_E-siliculosus-1a_F_contig1567.3276.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: D7G8J4_ECTSI (Calcineurin-like phosphoesterase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J4_ECTSI) HSP 1 Score: 766 bits (1978), Expect = 5.960e-274 Identity = 392/399 (98.25%), Postives = 392/399 (98.25%), Query Frame = 3
Query: 39 MVILVRATTRLWAPQALVLAAQPRATSSFQNLLAKSALHTSAAAAAAQQRSPGGVGGTAVRELRPYATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEIRGEEMTILTEYKSIPGQKRAARPPTPVSKGDELRRQ 1235
MVILVRATTRLWAPQALVLAAQPR TSSFQNLLAKSALHTSA AAA QQRS GGVGGTAVRELRPYATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPE LEIRGEEMTILTEYKSIPGQKRAAR PTPVSKGDE RRQ
Sbjct: 1 MVILVRATTRLWAPQALVLAAQPRPTSSFQNLLAKSALHTSAVAAA-QQRSSGGVGGTAVRELRPYATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEALEIRGEEMTILTEYKSIPGQKRAARQPTPVSKGDEFRRQ 398
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: A0A835Z3D9_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3D9_9STRA) HSP 1 Score: 321 bits (822), Expect = 9.510e-101 Identity = 160/297 (53.87%), Postives = 209/297 (70.37%), Query Frame = 3
Query: 309 SCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGG-DWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEIRGEEMTILTEYKSIPGQKRAARP 1196
S L MA LVD+ WAGGETV+VQ GD+FDRG+ DL ++E +Y LA+EA A GA+++++GNHE LNA GDH+MA R AF PF L+PEL+ L+G W L PEW+RCR+AAM PGGPV ++A H V++KVGD+L VHAG+LP H+ E GG +E LN T W+ +P+E+ Q P+WTR+YS+PDS ++ A QL+EVL+ TGTKRM+VGHTPQR GINSAADG+VWRVDT M A++GG+PEVLEI G+E+ +LTEY +P ++R A P
Sbjct: 2 SALNMAGLVDSTGHWAGGETVMVQSGDVFDRGEHDLVVEELLYCLAEEAAAAGGAVHTILGNHEALNACGDHTMAARTAFQPFDDLKPELEALLGDRGWGGLMQMPEWSRCRIAAMYPGGPVGAMLANHGVTLKVGDSLIVHAGVLPRHL------ELPGG------------LEGLNQRTWEWLTNAGPLPDELLQEASPVWTRLYSSPDSVDLHVRAVQQLDEVLQRTGTKRMIVGHTPQRIGINSAADGKVWRVDTAMCAIMGGKPEVLEICGDEIAVLTEYGRVPAEERRAWP 280
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: A0A835Z833_9STRA (Calcineurin-like phosphoesterase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z833_9STRA) HSP 1 Score: 319 bits (818), Expect = 1.940e-99 Identity = 164/322 (50.93%), Postives = 221/322 (68.63%), Query Frame = 3
Query: 231 PYATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEE-IWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEIR-GEEMTILTEYKSIPGQKRAA 1190
P V ER+V +GDVHGDI AF+ CL++A L+D E WAGG TV+VQ+GDIFDRGDDDL I+EW++ LA++A A GA+Y ++GNHE++N MGDHS A++++F PF+ L P ++ + + + LE P+WA RLAAMR GPVA +MA H+V+MK+G+ L VHAG+L EH+ G G VA +E LN+ ++L +P+E +W E P+WTR YS PD + + A +L VL TG+ RMVVGHTPQ AGINSAA G+VWRVDTGMT IGG+PEVLEIR G E++ILT+ + ++R+A
Sbjct: 40 PITIVEDEPERMVFMGDVHGDITAFQDCLEVAGLIDEEGAWAGGTTVLVQLGDIFDRGDDDLAIEEWLFLLAEQAAEAGGAVYHLLGNHELMNIMGDHSSASKESFAPFVELSPLVETWMNENTALLEKVPKWAWPRLAAMRASGPVAHMMAGHSVAMKIGNTLVVHAGILREHLEPQRCGGVTNG----GVAC----LELLNSVAANYLLNGGGMPQEMLWGRESPVWTRRYSMPDGKALAKDAEEELIAVLEATGSIRMVVGHTPQSAGINSAAQGKVWRVDTGMTKAIGGKPEVLEIRKGGEISILTKAGRVSAEQRSA 353
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: A0A6H5KL57_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL57_9PHAE) HSP 1 Score: 292 bits (748), Expect = 7.120e-89 Identity = 145/295 (49.15%), Postives = 194/295 (65.76%), Query Frame = 3
Query: 231 PYATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPE 1115
P V RLVVI DVHGD+ AF L A LVD WA GETV+VQ GD+FDRGD DL ++EW++ L ++A + GA+Y ++GNHE++NAMGDHS A+ K+F PF L +L S L+ FP+W + RLAAM PGGPV++++A+H+V+MK+GD L VH GL P + + A G +E LN T W++G+ +P+E+W + P+WTR YS+P E+ A A L++VL +TGT RM+VGHTPQ AGINSA G++WR DTGMTAMIGG+PE
Sbjct: 93 PITVVEKQPRRLVVIADVHGDLGAFAETLLAAGLVDGTGNWAAGETVLVQAGDVFDRGDSDLEVEEWLWTLQEQATESGGAVYHLLGNHEIMNAMGDHSTASPKSFEPFQDLNVDLAPF----GSQLDKFPDWGKPRLAAMAPGGPVSKMLASHSVAMKIGDTLLVHGGLRPVNFDPKSCRGATG----------MACLESLNRWTHEWLIGQGEMPKELWNRDSPVWTRFYSSPGGVELGEEAGADLQKVLDVTGTVRMIVGHTPQEAGINSALGGRLWRTDTGMTAMIGGQPE 373
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: D7FZT9_ECTSI (Calcineurin-like phosphoesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT9_ECTSI) HSP 1 Score: 280 bits (717), Expect = 1.500e-84 Identity = 144/297 (48.48%), Postives = 194/297 (65.32%), Query Frame = 3
Query: 300 AFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEIRGEEMTILTEY-KSIPGQKRA 1187
AF L A LVD WA GETV+VQ GD+FDRGD DL ++EW++ L ++A + GA+Y ++GNHE++NAMGDHS A+ +F PF +LD + S L+ FP+W + RLAAM PGGPV++++A+H+V+MK+GD L VH GL P + + A G +E LN T W++G+ +P+E+W + P+WTR YS+P E+ A A L++VL TGT RM+VGHTPQ AGINSA G++WR DTGMTAMIGG+PE LEI TI+T K IPG +RA
Sbjct: 21 AFAETLLAAGLVDGTGNWAAGETVLVQAGDVFDRGDADLEVEEWLWTLQEQATESGGAVYHLLGNHEIMNAMGDHSTASPNSFKPF----QDLDVDLAPFGSQLDKFPDWGKPRLAAMAPGGPVSKMLASHSVAMKIGDTLLVHGGLRPVNFDPKSCRGATG----------MACLESLNRWTHEWLVGQGEMPKELWNRDSPVWTRFYSSPGGVELSEEAEADLQKVLDATGTVRMIVGHTPQEAGINSALGGRLWRTDTGMTAMIGGQPEALEIVDGVATIITAGGKRIPGDERA 303
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: A0A4Y6PZ94_9DELT (Calcineurin n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PZ94_9DELT) HSP 1 Score: 238 bits (606), Expect = 1.340e-68 Identity = 135/311 (43.41%), Postives = 179/311 (57.56%), Query Frame = 3
Query: 231 PYATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPE--EIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEIRGEEMTILTE 1157
P AT P A R+V IGDVHGD++AF L+++ L+D E W GGETV VQ GD+ DRGDD+ I + +L ++A A G + ++ GNHE +N GD T + F F + E V D E PE R RLAA PGGPVA+L++ H + VGD++FVH GLLPEH A+ +ER+N +T WMLG+ P + P P W R+YS R+ + AA L+ L G +RMVVGHTPQ +GI SA DG+VWR+D GM+A GG P+ LEI G+E+ +L E
Sbjct: 55 PIATRHPEASRVVAIGDVHGDLEAFERALRLSGLIDDEGNWTGGETVFVQTGDLLDRGDDEPEIIALMERLEKQAKAAGGKVVALNGNHETMNVRGDLRYVTPEGFTDFHGV-----EGVQTDRPGFERVPEDKRERLAAFLPGGPVAKLLSHHNMVAVVGDSVFVHGGLLPEH--------------------ADYGIERINDETRRWMLGEADAPAFMQSRDPMPPNWVRLYS----RQTNEAACETLDAALEKLGAERMVVGHTPQMSGITSACDGKVWRIDVGMSAHYGGTPQALEISGDEVRVLRE 336
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: A0A1M3N5I2_9DELT (Metallophos domain-containing protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3N5I2_9DELT) HSP 1 Score: 229 bits (585), Expect = 1.170e-65 Identity = 127/317 (40.06%), Postives = 184/317 (58.04%), Query Frame = 3
Query: 210 TAVRELRPYATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLG-KRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEIRGEEMTILTE 1157
T R A PA ER+V IGD+HGD+DA R ++A +D +D W GG+ VVVQ GD+ DRGDDD + + V +L EA +A G + +++GNHE++N D TR AF F + P+ D + +A G PE R R AA PGGP A+++A V +VGD++FVH G+LP+H++ ++ +N D W+LG KR+ P+E+ +GPLWTR+YS A+ A L+E L+ KRMV+GHTPQ+ IN A + + WR+D GM+ GG+ +VLE+RG+ + +L E
Sbjct: 37 TPARSAGSLAVSKPAPERVVAIGDLHGDLDATRRAFRLAGAIDEKDAWIGGKLVVVQTGDLIDRGDDDRKVLDLVERLKGEAEKAGGEVVALVGNHEIMNNELDFRYVTRGAFSEFADVSPKDDGIAYA--AAKLGAPE--RGRAAAFLPGGPYAQMLARRPVVARVGDSIFVHGGVLPKHVK--------------------TGLDGINEDARKWLLGEKRTPPKELTSEDGPLWTRMYSAAPG----ASECAVLDETLKALNAKRMVMGHTPQKPDINPACNEKAWRIDVGMSKFYGGQIQVLELRGDTVKVLKE 325
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: A0A2D9TGE5_9DELT (Calcineurin n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TGE5_9DELT) HSP 1 Score: 229 bits (584), Expect = 2.330e-65 Identity = 126/293 (43.00%), Postives = 163/293 (55.63%), Query Frame = 3
Query: 249 PAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEI 1127
P RLV IGD+HGD+DA R+ L++A +DA+D W GG+ VVVQ GD+FDRGDD+L I+ +L EA A GA++ ++GNHE++NA GD T F + P D AL P R R+ A RPG PVA +A V VGD +FVH GLLP+H+ A G +ERLN + W+ G ++P + PE P+WTRVY+T D L++ L G RMV+GHTPQ GI S DG +WR+D GM A GG EVLEI
Sbjct: 73 PEPPRLVAIGDLHGDLDATRAALRLAGAIDAQDAWTGGDLVVVQTGDVFDRGDDELEIERLFDRLVTEARDAGGAIHRLLGNHELMNASGDFRYVTEGGFADYQGYGPTDDP-------ALARAPAAWRGRIVAFRPGAPVAMELAHRNVVEVVGDTVFVHGGLLPQHV---AHG-----------------LERLNREVACWLAGGTAVPPIVADPESPVWTRVYAT------DPVRCDLLQQTLAAVGAHRMVIGHTPQAGGITSDCDGALWRIDVGMAAAYGGPVEVLEI 332
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: A0A5J4Z723_PORPP (Shewanella-like protein phosphatase 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z723_PORPP) HSP 1 Score: 229 bits (585), Expect = 6.760e-65 Identity = 130/338 (38.46%), Postives = 183/338 (54.14%), Query Frame = 3
Query: 201 VGGTAVRELRPYATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFL------ALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHA-VSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEIRGEEMTILTEYKSIPGQKRAAR 1193
VGG + T AAERLV IGD+HGD+DA R L++ +++ D+W GG+TV+VQ+GD DRGD +L + +Y+L A A G ++ ++GNHE++N D T+ F F P+L ++ +++ P+W R R A RPGG A LMA V++ VGDNLFVH GL PEH+ + +E +N +T ++LGK P + + P+W R +S P D + L L+LT T+RM+VGHTPQ AG+N A G+VWRVDTGM++ GG PE LEI + + ILT G R R
Sbjct: 75 VGGLILSATGDVKTRFEAAERLVAIGDIHGDVDALRVALKLCNVLGPNDEWVGGKTVLVQVGDQLDRGDTELAVLRLLYRLQDTAPAAGGKVHILLGNHELMNVEHDFRYVTQGGFAEFAREVEKTGREPDLSKVPTPVIESIKAMPQWMRPRALAFRPGGTEATLMANRMQVAVVVGDNLFVHGGLKPEHVT------------------EPDALETMNKNTRQFLLGKADKPTALRGGKSPVWMRNFSRPVPETSDCS---MLTRTLQLTNTRRMIVGHTPQAAGVNGACSGRVWRVDTGMSSAYGGIPEALEITPKRVRILTPRGVQAGNSRMRR 391
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Match: A0A7S1XDL0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDL0_9RHOD) HSP 1 Score: 227 bits (579), Expect = 2.190e-64 Identity = 129/317 (40.69%), Postives = 183/317 (57.73%), Query Frame = 3
Query: 234 YATVVPAAERLVVIGDVHGDIDAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRP------ELDELVGGD--WS-ALEGFPEWARCRLAAMRPGGPVARLMAAHA-VSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEVMERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEVLEIRGEEMTILT 1154
YA V P +R++ IGD+HGDIDAFRS L+ A L+ D+W+GG +V+VQ+GD DRGD++ I + +++L EA GA++ ++GNHE++N D T + F F + P EL ++ G + W+ ++ P+W R R A RPGGP++ + A V++ VGDN+FVH GL PEH+ D DS+ ++LN + ++ GKR P + +GPLW R YS P E D L L KRM+VGH+ Q+ GINSA G+VWRVDTGM++ GG PE LEI + ILT
Sbjct: 52 YAAVFPMVKRVIAIGDIHGDIDAFRSVLRNAGLISPNDEWSGGSSVLVQVGDQLDRGDNEREILDLLFRLQGEAKENGGAVHVLLGNHEVMNVDSDFRYVTPRGFEDFSTVLPKDSINRELRKVAGSNSAWADMIKNMPDWMRPRALAFRPGGPISSNLFTRAQVAVVVGDNVFVHGGLKPEHLP----------DGLDSI-------DKLNDECHGFLRGKREKPIVLRGGKGPLWMRNYSRPIPTEADCQ---MLFRTLERLNAKRMIVGHSVQKQGINSACGGRVWRVDTGMSSAYGGTPEALEITPSRIRILT 348 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1567.3276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1567.3276.1 >prot_E-siliculosus-1a_F_contig1567.3276.1 ID=prot_E-siliculosus-1a_F_contig1567.3276.1|Name=mRNA_E-siliculosus-1a_F_contig1567.3276.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=400bp MVILVRATTRLWAPQALVLAAQPRATSSFQNLLAKSALHTSAAAAAAQQRback to top mRNA from alignment at E-siliculosus-1a_F_contig1567:19338..23954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1567.3276.1 ID=mRNA_E-siliculosus-1a_F_contig1567.3276.1|Name=mRNA_E-siliculosus-1a_F_contig1567.3276.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4617bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1567:19338..23954+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1567:19338..23954+ >mRNA_E-siliculosus-1a_F_contig1567.3276.1 ID=mRNA_E-siliculosus-1a_F_contig1567.3276.1|Name=mRNA_E-siliculosus-1a_F_contig1567.3276.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2400bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1567:19338..23954+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |