mRNA_E-siliculosus-1a_F_contig15647.3262.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0KUN3_SHESA (Uncharacterized protein n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0KUN3_SHESA) HSP 1 Score: 585 bits (1509), Expect = 2.380e-205 Identity = 301/313 (96.17%), Postives = 304/313 (97.12%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G RHRAA LATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDP LQRQRQLLIGRLQHLQRLGLADEIQPGTW+IHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADEL DRGYLVIDGVDGKAHYISLN DELTNYPTGAVVEVR SAELR+ADRNIAELASDGLYRTDHHLVIEQGRTK G DPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGGRGFSDIG
Sbjct: 214 GFRHRAAELATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPALQRQRQLLIGRLQHLQRLGLADEIQPGTWNIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELRDRGYLVIDGVDGKAHYISLNTSDELTNYPTGAVVEVRCSAELRSADRNIAELASDGLYRTDHHLVIEQGRTKAGRDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGFSDIG 526
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: UPI00163FA1B1 (relaxase/mobilization nuclease and DUF3363 domain-containing protein n=1 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00163FA1B1) HSP 1 Score: 532 bits (1371), Expect = 1.870e-184 Identity = 272/313 (86.90%), Postives = 285/313 (91.05%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
GIRHRAA LATEWLGRRTELEIQQTLR EVEQERWTSLDRTL RE G DHRV+IERF DP LQRQ LLIGRLQHL+RLGLADE+Q G WDIHADAEKTLRALGERGDIIRTLQRSMSGLSREL VFE ESGR+++GRVAGKGLADELHDRGYLV+DGVDGKAHY++LNARDEL NYPTGAVVEVRG AE+R ADRNIAELASDGLYRTDHHLVIEQGR K G DPQE+VAAHVRRLEALRRVGIVERV EGLWKVPGDLPERGRQYD QRLG V VELKSHLPIERQ+RVIGATWLDQQLI GG G D+G
Sbjct: 214 GIRHRAAELATEWLGRRTELEIQQTLRHEVEQERWTSLDRTLHREMGGDHRVRIERFNDPRLQRQ--LLIGRLQHLRRLGLADEVQSGIWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELAVFESDESGRTIVGRVAGKGLADELHDRGYLVVDGVDGKAHYVALNARDELANYPTGAVVEVRGFAEVRMADRNIAELASDGLYRTDHHLVIEQGRGKAGRDPQEVVAAHVRRLEALRRVGIVERVTEGLWKVPGDLPERGRQYDAQRLGDVTVELKSHLPIERQARVIGATWLDQQLICGGNGLGDLG 524
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: I1YGS8_METFJ (Type IV secretory pathway, VirD2 components (Relaxase) n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=I1YGS8_METFJ) HSP 1 Score: 524 bits (1350), Expect = 4.580e-184 Identity = 265/313 (84.66%), Postives = 284/313 (90.73%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G RHRAA LATEWLG RTELEIQQTL+REVEQERWTSLDRTLQREAG+D RVQIERF +P LQRQR LLIGRLQ LQRLGLADE+QPGTW IHADAEKTLRALGERGDIIRT+QR+MSG RELTVFEPGE GRS+IGRVA KGLADELHDRGYLVIDG DGKAHY++LNA DEL NYPTGAVVEV+GSA++RAAD+NIA LASDGLYR DHHL IEQGR K G DPQE+ AAHVRRLEALRR GIVERVAEGLWKVP DL ERGRQYD +RLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGG+G ++G
Sbjct: 21 GFRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGLADEVQPGTWAIHADAEKTLRALGERGDIIRTMQRAMSGQPRELTVFEPGEDGRSIIGRVAAKGLADELHDRGYLVIDGTDGKAHYVALNAHDELANYPTGAVVEVKGSADVRAADKNIAALASDGLYRADHHLAIEQGRAKPGRDPQEVAAAHVRRLEALRRAGIVERVAEGLWKVPDDLVERGRQYDARRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGKGLGNLG 333
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: UPI00046574C7 (DUF3363 domain-containing protein n=1 Tax=Pseudomonas nitroreducens TaxID=46680 RepID=UPI00046574C7) HSP 1 Score: 531 bits (1368), Expect = 7.830e-184 Identity = 267/313 (85.30%), Postives = 287/313 (91.69%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G RHRAA LATEWLG RTELEIQQTL+REVEQERWTSLDRTLQREAG+D RVQIERF +P LQRQR LLIGRLQ LQRLGLADE QPGTW +HADA+KTLRALGERGDIIRT+QR+MSG REL VFEPG+ GR++IGRVAGKGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYP GAVVEVRGSAE+RAAD+NIA LASDGLYRTDHHL IEQG+ K G DPQE+VAAHVRRLEALRR GIVERVA+GLWKVPGDL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGG+G D+G
Sbjct: 224 GFRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGLADETQPGTWAVHADADKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTIIGRVAGKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPAGAVVEVRGSAEVRAADKNIAALASDGLYRTDHHLAIEQGQAKAGRDPQEVVAAHVRRLEALRRAGIVERVADGLWKVPGDLAERGRQYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGKGLGDLG 536
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A1R1JRZ1_ALCXX (Type VI secretion protein n=15 Tax=Proteobacteria TaxID=1224 RepID=A0A1R1JRZ1_ALCXX) HSP 1 Score: 529 bits (1363), Expect = 3.940e-183 Identity = 268/313 (85.62%), Postives = 285/313 (91.05%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G RHRAA LATEWLG RTELEIQQTL+REVE+ERWTSLDRTLQREAG+D RVQIERF +P LQRQR LLIGRLQ LQRLGLADE+QPGTW IHADAEKTLRALGERGDIIRT+QR+MSG REL VFEPG+ GR+VIGRVAGKGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYPTGAVVEVRGSA++RAAD+NIA LASDGLYR DHHL IEQGR G DPQE+VAAHVRRLEALRR GIVERV EGLWKVP DL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGGRG D+G
Sbjct: 221 GFRHRAAELATEWLGPRTELEIQQTLQREVEKERWTSLDRTLQREAGEDGRVQIERFNEPRLQRQRLLLIGRLQRLQRLGLADEVQPGTWAIHADAEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTVIGRVAGKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPTGAVVEVRGSADVRAADKNIAALASDGLYRADHHLAIEQGRATAGRDPQEVVAAHVRRLEALRRAGIVERVTEGLWKVPDDLAERGRQYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGLGDLG 533
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A640W653_9GAMM (DUF3363 domain-containing protein n=1 Tax=Salinicola corii TaxID=2606937 RepID=A0A640W653_9GAMM) HSP 1 Score: 528 bits (1361), Expect = 6.310e-183 Identity = 271/313 (86.58%), Postives = 283/313 (90.42%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G+RHRAA LATEWLGRRTELEIQQTL+REVEQERWTSLDRTLQREA DD RVQI RF DP LQRQRQLLIGRLQHLQ LGLA+E+QPG WDIH DAEKTLRALGERGDIIRTLQRSMSG SREL VFEPGES R V+GRVAGKGLADELHDRGYLVIDGVDGKAHY++L RDELTNYPTGAVVEVRGSAE+RAADRNI LASDGLYRTDHHLVIEQGR K DPQE+VAAHVRRLEALRRVGIVERVAEGLWKV DLPERGRQYD QRLGGV VELKSHLPIERQ+RVIGATWLD+QLI GG+ D G
Sbjct: 214 GVRHRAAELATEWLGRRTELEIQQTLQREVEQERWTSLDRTLQREADDDQRVQIARFNDPKLQRQRQLLIGRLQHLQCLGLANEVQPGIWDIHTDAEKTLRALGERGDIIRTLQRSMSGQSRELAVFEPGESRRPVVGRVAGKGLADELHDRGYLVIDGVDGKAHYVALTPRDELTNYPTGAVVEVRGSAEVRAADRNIIALASDGLYRTDHHLVIEQGRAKTRRDPQEVVAAHVRRLEALRRVGIVERVAEGLWKVSNDLPERGRQYDAQRLGGVTVELKSHLPIERQARVIGATWLDRQLIAGGKELGDQG 526
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A0P9JC46_9PSED (Relaxase type IV secretory pathway VirD2 n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0P9JC46_9PSED) HSP 1 Score: 525 bits (1352), Expect = 1.880e-181 Identity = 265/313 (84.66%), Postives = 282/313 (90.10%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G RHRAA LATEWLG RTELEIQQTL+REVEQERWTSLDRTLQREA DD RVQIERF +PTLQRQR LLIGRLQ LQR+GLADE QPGTW +H DAEKTLR LGERGDIIRTLQR+MSG REL VFEPG+ GRS++GRVAGKGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYP+GAVVEVRGSA +RAAD+NI LASDGLYRTDHHL IEQGR K G DPQE+VAAHVRRLEALRR GIVERVA+GLWKVP DL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIG GRG D+G
Sbjct: 221 GFRHRAAELATEWLGPRTELEIQQTLQREVEQERWTSLDRTLQREASDDGRVQIERFNEPTLQRQRLLLIGRLQRLQRMGLADETQPGTWTVHGDAEKTLRVLGERGDIIRTLQRAMSGQPRELAVFEPGDDGRSIVGRVAGKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPSGAVVEVRGSAAVRAADKNIVALASDGLYRTDHHLAIEQGRAKPGRDPQEVVAAHVRRLEALRRAGIVERVADGLWKVPNDLAERGRQYDGQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGSGRGLGDLG 533
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: W9TCJ6_9PSED (VirD2 components relaxase n=24 Tax=root TaxID=1 RepID=W9TCJ6_9PSED) HSP 1 Score: 523 bits (1348), Expect = 7.600e-181 Identity = 263/313 (84.03%), Postives = 283/313 (90.42%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G RHRAA LATEWLG TELEIQQTL+REVEQERWTSLDRTLQRE G+D RVQIERF +P LQRQR LLIGRLQHLQRLGLADE QPGTW +HAD EKTLRALGERGDIIRT+QR+MSG REL VFEPG+ R+++GRVA KGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYPTGAVVEVRGSAE+RAAD+NIA LASDGLYRTDHHL IEQGR K G DPQE+VAAH+RRLEALRR GIVERVA+GLWKVP DL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGGRG ++G
Sbjct: 221 GFRHRAAELATEWLGPHTELEIQQTLQREVEQERWTSLDRTLQREDGEDGRVQIERFNEPRLQRQRLLLIGRLQHLQRLGLADETQPGTWAVHADTEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDDRTIVGRVAAKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPTGAVVEVRGSAEVRAADKNIATLASDGLYRTDHHLAIEQGRAKPGRDPQEVVAAHIRRLEALRRAGIVERVADGLWKVPDDLAERGRQYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGRGLGELG 533
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A157SQQ7_9BORD (Conjugal transfer protein VirD2 n=18 Tax=Proteobacteria TaxID=1224 RepID=A0A157SQQ7_9BORD) HSP 1 Score: 522 bits (1344), Expect = 2.700e-180 Identity = 262/313 (83.71%), Postives = 283/313 (90.42%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G RHRAA LATEWLG RTELEIQQTL+REVEQ+RWTSLDRTLQREAG+D RVQ ERF +P LQRQR LLIGRLQ LQRLGLADE QPGTW +HADAEKTLRALGERGDIIRT+QR+MSG REL VFEPG+ GR+++GRVA KGLADELHDRGYLVIDGVDGKAHY++LNARDEL NYPTGAVVEVRGSAE+RAAD+NIA LASDGLYRTDHHL IEQGR K G DPQE+VA HVRRLEALRR GIVER A+GLWKVP DL ERGRQYD QRLGGVAVELKSHLPIERQ+RVIGATWLDQQLIGGG+G ++G
Sbjct: 217 GFRHRAAELATEWLGPRTELEIQQTLQREVEQQRWTSLDRTLQREAGEDGRVQTERFNEPRLQRQRLLLIGRLQRLQRLGLADETQPGTWAVHADAEKTLRALGERGDIIRTMQRAMSGQPRELAVFEPGDDGRTIVGRVAAKGLADELHDRGYLVIDGVDGKAHYVALNARDELANYPTGAVVEVRGSAEVRAADKNIAALASDGLYRTDHHLAIEQGRAKPGRDPQEVVAVHVRRLEALRRAGIVERAADGLWKVPDDLAERGRQYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIGGGKGLGELG 529
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Match: A0A0U5DVJ4_STEMA (Putative type iv secretory pathway vird2 (Relaxase)-related protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0U5DVJ4_STEMA) HSP 1 Score: 525 bits (1353), Expect = 4.700e-180 Identity = 265/313 (84.66%), Postives = 283/313 (90.42%), Query Frame = 1
Query: 1 GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHRVQIERFIDPTLQRQRQLLIGRLQHLQRLGLADEIQPGTWDIHADAEKTLRALGERGDIIRTLQRSMSGLSRELTVFEPGESGRSVIGRVAGKGLADELHDRGYLVIDGVDGKAHYISLNARDELTNYPTGAVVEVRGSAELRAADRNIAELASDGLYRTDHHLVIEQGRTKVGCDPQEIVAAHVRRLEALRRVGIVERVAEGLWKVPGDLPERGRQYDTQRLGGVAVELKSHLPIERQSRVIGATWLDQQLIGGGRGFSDIG 939
G RHRAA LATEWLG RT+LEIQQTL+REVEQERWTSLDRTLQREA DD R+QIERF +P LQRQR LLIGRLQ LQRLGLADE+QPGTWDIHADAEKTLRALGERGDIIR LQR+MSG REL VFEPGE GR+++GRVA KGLADELH RGYLVIDGVDGKAHY++L+ARDEL NYPTGAVVEVRGSAE R AD+NIA LASDGLYRTDHHL IEQGR K G DPQE+VAAHVRRLEALRR GIVERVAEGLWKVP DL ERGRQYD QRLGGVAVE+KSHLPIERQ+R+IGATWLDQQLIGGGRG D+G
Sbjct: 338 GFRHRAAELATEWLGPRTKLEIQQTLQREVEQERWTSLDRTLQREADDDGRMQIERFNEPALQRQRLLLIGRLQRLQRLGLADEVQPGTWDIHADAEKTLRALGERGDIIRALQRAMSGQPRELAVFEPGEGGRAIVGRVAAKGLADELHGRGYLVIDGVDGKAHYVALDARDELANYPTGAVVEVRGSAEARVADKNIATLASDGLYRTDHHLAIEQGRAKAGRDPQEVVAAHVRRLEALRRAGIVERVAEGLWKVPEDLAERGRQYDAQRLGGVAVEVKSHLPIERQARIIGATWLDQQLIGGGRGLGDLG 650 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15647.3262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig15647.3262.1 >prot_E-siliculosus-1a_F_contig15647.3262.1 ID=prot_E-siliculosus-1a_F_contig15647.3262.1|Name=mRNA_E-siliculosus-1a_F_contig15647.3262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=313bp GIRHRAAGLATEWLGRRTELEIQQTLRREVEQERWTSLDRTLQREAGDDHback to top mRNA from alignment at E-siliculosus-1a_F_contig15647:1..939- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig15647.3262.1 ID=mRNA_E-siliculosus-1a_F_contig15647.3262.1|Name=mRNA_E-siliculosus-1a_F_contig15647.3262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=939bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15647:1..939- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15647:1..939- >mRNA_E-siliculosus-1a_F_contig15647.3262.1 ID=mRNA_E-siliculosus-1a_F_contig15647.3262.1|Name=mRNA_E-siliculosus-1a_F_contig15647.3262.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15647:1..939- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |