mRNA_E-siliculosus-1a_F_contig1560.3229.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1560.3229.1
Unique NamemRNA_E-siliculosus-1a_F_contig1560.3229.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: D7G4A7_ECTSI (Apyrase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A7_ECTSI)

HSP 1 Score: 776 bits (2003), Expect = 6.360e-275
Identity = 393/401 (98.00%), Postives = 395/401 (98.50%), Query Frame = 3
Query:  369 MFVNRPPPRGAFSTPSRTGALGGSGAGGGAVRSKWTILLXXXXXVAGIFVMPRFAGGGGGKLRGSTASSLAEGGPSKPDTWDILLISDLDKKSKVDDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIFPIPASRADVAVAKGGNR 1571
            MFVNRPPPRGAFSTPSRTGALGGSGAGGGAVRSKWTILLXXXXXVAGIFVMPRFAGGGGGKLRGSTASSLAEGGP KPDTWDILLISDLDKKSKVDDKGKQYRSVLQAA LTRDPAT KFS+E GEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDP GVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTF+MVFTLDGEVLLEE EIPGGFKFEGLEIFPIPASRADVAVAKGGNR
Sbjct:    1 MFVNRPPPRGAFSTPSRTGALGGSGAGGGAVRSKWTILLXXXXXVAGIFVMPRFAGGGGGKLRGSTASSLAEGGPFKPDTWDILLISDLDKKSKVDDKGKQYRSVLQAAALTRDPATKKFSVEMGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPHGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFVMVFTLDGEVLLEENEIPGGFKFEGLEIFPIPASRADVAVAKGGNR 401          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: A0A835Z277_9STRA (Apyrase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z277_9STRA)

HSP 1 Score: 372 bits (956), Expect = 1.160e-117
Identity = 178/308 (57.79%), Postives = 230/308 (74.68%), Query Frame = 3
Query:  600 PDTWDILLISDLDKKSKVDDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQ-GERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIF 1520
            P  + +L+I+DLD +S+V   GK Y S+LQ  TL R   T ++S++ G A  L SGHNEAGRGMELSEL+ Y G L T DDRTGIVFE+++E  G+ H+AP+++L EGDG++DKGMK+EWAT KDG LV GSFGKEYT+  G +++TNNNW++ +D +G   R DWT+ Y T+R+  G TFPGYMIHE+  W+ AL +WVFLPRRIS + YDD  DE+ GSN +LI+DE   KV+VR VG I+   GFSSFKF+PGT D V+VALKSEE     +Q T++ VF L+G VLLEETE+PG  KFEGLE++
Sbjct:   76 PSDYRLLVIADLDTQSRVGTDGKVYHSILQEGTLHRSADTGRYSVQWGGAHKLKSGHNEAGRGMELSELVEYNGRLYTFDDRTGIVFEVIKESSGDYHVAPKHVLGEGDGSVDKGMKIEWATVKDGELVCGSFGKEYTNAAGAVISTNNNWVVLVDAEGRQRRYDWTQHYQTMREATGTTFPGYMIHEAGNWAPALRRWVFLPRRISPDPYDDAEDERKGSNKMLILDEALSKVEVREVGTIMPERGFSSFKFLPGTRDTVIVALKSEERSADNSQNTYITVFDLEGRVLLEETEMPGLAKFEGLEVW 383          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: UPI000711D1E8 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711D1E8)

HSP 1 Score: 337 bits (864), Expect = 1.650e-104
Identity = 166/304 (54.61%), Postives = 217/304 (71.38%), Query Frame = 3
Query:  609 WDILLISDLDKKSKV--DDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLE 1514
            +D+ ++SDLDKKSKV  D KGK +RSV++   L R      +S++    T+LF+  +EAGRGMELS L+ +   L T DDRTG+ FEI+ ++      PRYI+ EGDGN DKG K EWAT KDG + VGSFGKEYT+ DG I NTNN WI  ID  GV++ +DWT Q+N LR+ VG  +PGYMIHE+  WS    +WV LPRR+S E YD+  DE+ GSNT++   EDF K++V+H+  +  T GFS FKF+PG+ DQ++VALKSEE EE QTQ T++ VF ++G++L+EETEIPG  KFEGLE
Sbjct:   56 FDVYIVSDLDKKSKVQSDKKGK-WRSVMKKGQLKRMD-NGMYSIQWISDTELFTKISEAGRGMELSALVEFNRRLFTFDDRTGLAFEIVGKKA----IPRYIMMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWISIIDRNGVVTHEDWTDQFNKLREAVGCPYPGYMIHEAITWSPVRRQWVILPRRVSKEAYDENEDERRGSNTVIFASEDFSKIEVKHITPLTPTRGFSDFKFLPGSKDQIIVALKSEENEEAQTQNTYITVFDVNGKILMEETEIPGMMKFEGLE 353          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: A0A196S865_BLAHN (Soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S865_BLAHN)

HSP 1 Score: 337 bits (865), Expect = 5.090e-104
Identity = 168/312 (53.85%), Postives = 222/312 (71.15%), Query Frame = 3
Query:  591 PSKPD-TWDILLISDLDKKSKV-DDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIF 1520
            PS PD T+ + ++SDLDKKS+V DDK   ++SV++   L RD     +++   E  +L +  +EAGRGMELS L+ Y   L   DDRTG+VFEI   +G + + PR+IL EGDGN DKG K EWAT KDG + VGSFGKEYT+ DG I NTNN W+  ID  G +S +DWT ++N +R+  G  +PGYMIHE+ +WS A  +WV LPRR+S E YD+  DE+ GSNT+L+  EDF +++VRH+  +  T GFS FKF+PG+ D+V+VALKSEE EE QTQ +++ VF+LDG VL+EETEIPGG K+EGLE  
Sbjct:   95 PSNPDGTFRLAIVSDLDKKSRVEDDKKGLWKSVMKKGELKRD-GKGGYTISWKEDVELRTKISEAGRGMELSALVEYNHRLYAFDDRTGLVFEI---RGSKAI-PRHILMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWVSIIDKYGAVSHEDWTARFNKVREAAGCPYPGYMIHEAISWSPARRQWVILPRRVSQEPYDENEDERRGSNTVLLASEDFSRIEVRHITPLTPTRGFSDFKFLPGSKDEVIVALKSEENEEQQTQNSYITVFSLDGRVLMEETEIPGGMKYEGLEFL 401          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: UPI00071200F0 (soluble calcium-activated n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071200F0)

HSP 1 Score: 333 bits (855), Expect = 1.240e-103
Identity = 160/311 (51.45%), Postives = 225/311 (72.35%), Query Frame = 3
Query:  591 PSKPDTWDILLISDLDKKSKV-DDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIF 1520
            P+ P+++ +++++DLDK S+V DDK  ++RS+L+   L R      F++   E  ++F+  +EAGRGMELS L+N+   L T DDRTG+VFE+++  G R + PR+IL EG+G+ DKG K EWAT KD  ++ GSFGKEYT +DG IVNTNN W+  ID  G +S ++WT Q+N LR  V  ++PGYMIHE+ +WSD   +WV LPRR+S E YD+V DE+ GSN +L+  EDF +V++RH+  +  T GFS FKF+P + D ++VALKSEE EE+Q+Q T++ VF+L+G++LLEET IPG  KFEGLE F
Sbjct:    2 PNLPNSFKLMVVADLDKLSRVPDDKKGKWRSILKKGELRR-AEDGSFTIHWLEDQEIFTKFSEAGRGMELSALVNFHNHLYTFDDRTGLVFELVK--GNRAL-PRFILMEGNGDTDKGQKTEWATVKDDRIIAGSFGKEYTSSDGSIVNTNNMWVSIIDKDGSVSHENWTGQFNKLRKAVDVSYPGYMIHEAVSWSDVHKQWVILPRRVSKEPYDEVEDERRGSNLVLLASEDFDQVEIRHITPLTPTRGFSEFKFLPKSDDTIIVALKSEENEEMQSQNTYITVFSLNGDILLEETAIPGNHKFEGLEFF 308          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: A0A196S3X9_BLAHN (CANT1 soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S3X9_BLAHN)

HSP 1 Score: 335 bits (859), Expect = 1.290e-103
Identity = 171/352 (48.58%), Postives = 234/352 (66.48%), Query Frame = 3
Query:  468 KWTILLXXXXXVAGIFVMPRFAGGGGGKLRGSTASSLAEGGPSKPDTWDILLISDLDKKSKV-DDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIF 1520
            K+ +L      + G+ V+  F       + G+ +S        +   +D+ ++SDLDKKS++ DDK  Q++S+++   L RD     +++   E  +L +  +EAGRGMELS L+ Y   L   DDRTG+VFEI   +G + + PR+IL EGDGN DKG K EWAT KDG + VGSFGKEYT+ DG I NTNN W+  ID  G +S +DWT ++N +R+  G  +PGYMIHE+ +WS A  +WV LPRR+S E YD+  DE+ GSNT+L+  EDF +++V H+  +  T GFS FKF+PG+ D+V+VALKSEE EE QTQ ++L VF+LDG VL+EETEIPGG KFEGLE  
Sbjct:   25 KYPLLFIGMGVLVGVAVVYLFLS----SVVGAVSSRNLRSDAIRNGVFDVAIVSDLDKKSRIEDDKKGQWKSIMKKGQLKRD-GKGGYTISWMEDVELRTKVSEAGRGMELSALVEYNRRLYAFDDRTGMVFEI---RGSKAI-PRHILMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWVSIIDKYGAVSHEDWTARFNKVREAAGCPYPGYMIHEAISWSPARRQWVILPRRVSQEPYDENEDERRGSNTVLLASEDFSRIEVCHITPLTPTRGFSDFKFLPGSKDEVIVALKSEENEEQQTQNSYLTVFSLDGRVLMEETEIPGGMKFEGLEFL 367          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: A0A196SJW8_BLAHN (Soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJW8_BLAHN)

HSP 1 Score: 330 bits (845), Expect = 2.700e-101
Identity = 165/321 (51.40%), Postives = 230/321 (71.65%), Query Frame = 3
Query:  561 STASSLAEGGPSKPDTWDILLISDLDKKSKV-DDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIF 1520
            STASS   G     +T+ +++++DLD  S+  DDK  +++++L+ A L R     KFS+   E  ++F+  +EAGRGMELS L+ +   L + DDRTGIV+E+++  G + + PR+IL EG+G+ +KG K EWAT KDG ++VGSFGKEYT+ DG I NTNN W+ TID  G +   DWT+ YN LR  VG ++PGYMIHE+ AWS  + KWV LPRR+S++ YD+V DE+ GSN +L+V E+F+K++VR +  I  T GFS FKF+P + DQ++VALKSEE E+LQTQ +++ VF L+G VL++ETEIPG  KFEGLE F
Sbjct:   72 STASSSVTG----DETYKLMVVADLDTNSREKDDKKGKWKTILKKAELRRKE-DGKFSVHWLEDQEVFTKFSEAGRGMELSALLEFNNRLYSFDDRTGIVYEMVK--GNKAI-PRFILMEGNGDTEKGQKSEWATVKDGKMIVGSFGKEYTNPDGSIRNTNNMWVSTIDSNGHVEHVDWTENYNRLRKAVGCSYPGYMIHEAIAWSQHMKKWVVLPRRVSNQPYDEVEDERRGSNLVLLVSENFKKIEVRRITPITPTRGFSDFKFLPNSHDQIIVALKSEESEKLQTQNSYITVFDLNGTVLMDETEIPGKHKFEGLEFF 384          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: A0A7S2UTY5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTY5_9STRA)

HSP 1 Score: 324 bits (830), Expect = 4.300e-100
Identity = 159/309 (51.46%), Postives = 215/309 (69.58%), Query Frame = 3
Query:  609 WDILLISDLDKKSKVDDKGKQ-YRSVLQAATLTRDPATN-----KFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMA-PRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLE 1514
            ++  +I+DLD  +KV+   K  + S+L+   L R  A +     ++S+  G+   L+S HNEAGRGMELSEL+NY G + T DDRTGI+FE+ +  G   MA PR I+ EGDGN DKGMK+EWAT KDG + +GS GKEYT  DG + NTNN W++T+D  GV++  D+  QY  LR   GA +PGY+IHE+ AWS+AL +WV LPRR+S E YD+  DEK GSN +++ DE F ++ +  VG I    GFSSFKF+P T DQV+VALKSEE     T+ +++MVF L+G+VL++ETEIPG  K+EG+E
Sbjct:    6 FNFRIIADLDHGAKVEGSKKPLFHSILREGVLVRSVAGSEGGSPRYSVSWGQEHQLYSAHNEAGRGMELSELVNYNGRIYTFDDRTGIIFEVEDAAGASPMAVPRNIVMEGDGNTDKGMKIEWATVKDGLMYLGSMGKEYTRPDGSVANTNNLWVVTVDRDGVVTHHDYKDQYAKLRSVAGAGWPGYLIHEAIAWSEALRRWVILPRRVSEEAYDEELDEKKGSNMVMLADEGFEQIKLFRVGQITPERGFSSFKFLPHTNDQVIVALKSEENAAAGTEASYIMVFDLNGKVLMDETEIPGLHKYEGIE 314          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: D8LZ82_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LZ82_BLAHO)

HSP 1 Score: 320 bits (821), Expect = 2.080e-97
Identity = 162/319 (50.78%), Postives = 219/319 (68.65%), Query Frame = 3
Query:  567 ASSLAEGGPSKPDTWDILLISDLDKKSKVDDKGK-QYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIF 1520
            +SSL + G      +D++++SDLDKKS++ +  K +++S+++   L RD    ++S+E    + L    +EAGRGMELS L  +R  L   DDRTGI FEI   +G + + PRYI+ EGDGN DKG K EWAT KD  +  GSFGKEYT+ DG I NTNN W+  ID  G I+ +DWT +YN LR  VG  +PGYMIHE+ +WS    +WV LPRR+S + YD+  DE+ GSNT+++  EDF +++VRH+  +  T GFS FKF+PG+ D V+VALKSEE EE +TQ +++MVF LDG +L+EETEIPG  KFEGLE  
Sbjct:  105 SSSLKQDG-----VFDLVIVSDLDKKSRIVESRKGEWKSIMKKGRLLRDNE-GRYSIEWKGESTLTGKISEAGRGMELSALTWFRNKLYAFDDRTGIAFEI---RGSKAI-PRYIMMEGDGNNDKGQKTEWATVKDDKMYAGSFGKEYTNPDGSIKNTNNMWVSVIDSHGQITHEDWTDRYNKLRQAVGCPYPGYMIHEAISWSPHRKQWVILPRRVSKKPYDENEDERRGSNTVILASEDFSEIEVRHITTLTPTRGFSEFKFLPGSKDSVIVALKSEENEEEKTQNSYIMVFNLDGTMLMEETEIPGKMKFEGLEFM 413          
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Match: D8MAA1_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAA1_BLAHO)

HSP 1 Score: 315 bits (806), Expect = 9.100e-96
Identity = 153/306 (50.00%), Postives = 212/306 (69.28%), Query Frame = 3
Query:  606 TWDILLISDLDKKSKV-DDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAGRGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVVVALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIF 1520
            ++ +++++DLDK+S+V DDK  ++RS+L+   L R      F++   E  ++F+  +EAGRGMELS L+ Y   L + DDRTG+VFE+++  G + + PRYIL EGDGN  KG K EWAT KD +++ GSFGKEYT+ DG I NTNN W+  I   G I+ ++WT ++N LR   G  +PGYMIHE+  WSD   +WV LPRR+S E YD+  DEK GSN +++  EDF  ++VRH+  I  T GFS FKF+P + D+++VALKSEE EE QTQ +++ VF LDG +LL E+ IPG  KFEGLE +
Sbjct:   66 SFKLMIVADLDKESRVKDDKKGRWRSILKKGEL-RKQKDGTFTIHWLEDQEIFTQLSEAGRGMELSALVEYHNRLYSFDDRTGLVFELVK--GNKAI-PRYILMEGDGNTTKGQKTEWATVKDDAILAGSFGKEYTNADGSIANTNNMWVSVIHNTGEITHENWTDRFNKLRKAAGCPYPGYMIHEAIMWSDIRRQWVILPRRVSKEPYDEKEDEKRGSNVVMLASEDFSSIEVRHITQITPTRGFSEFKFLPQSNDEIIVALKSEENEEQQTQNSYITVFDLDGHILLSESVIPGNHKFEGLEFY 367          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1560.3229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4A7_ECTSI6.360e-27598.00Apyrase family protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835Z277_9STRA1.160e-11757.79Apyrase family protein n=1 Tax=Tribonema minus Tax... [more]
UPI000711D1E81.650e-10454.61hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A196S865_BLAHN5.090e-10453.85Soluble calcium-activated nucleotidase n=1 Tax=Bla... [more]
UPI00071200F01.240e-10351.45soluble calcium-activated n=1 Tax=Blastocystis sp.... [more]
A0A196S3X9_BLAHN1.290e-10348.58CANT1 soluble calcium-activated nucleotidase n=1 T... [more]
A0A196SJW8_BLAHN2.700e-10151.40Soluble calcium-activated nucleotidase n=1 Tax=Bla... [more]
A0A7S2UTY5_9STRA4.300e-10051.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LZ82_BLAHO2.080e-9750.78Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
D8MAA1_BLAHO9.100e-9650.00Uncharacterized protein n=1 Tax=Blastocystis homin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1560contigE-siliculosus-1a_F_contig1560:1305..11559 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1242
Model size2690
Exons10
Ec32 orthologEc-02_001970.1
Ec32 ortholog descriptionApyrase
Hectar predicted targeting categorysignal anchor
BRITEko00000,ko00001,ko01000,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC3.6.1.6
EggNOG OGsKOG4494@1,KOG4494@2759
EggNOG free text desc.guanosine-diphosphatase activity
GOsGO:0000003,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004382,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006029,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006213,GO:0006220,GO:0006244,GO:0006256,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006986,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009134,GO:0009135,GO:0009137,GO:0009138,GO:0009140,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009179,GO:0009181,GO:0009185,GO:0009191,GO:0009193,GO:0009195,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009790,GO:0009987,GO:0010033,GO:0010259,GO:0012505,GO:0016020,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017111,GO:0018130,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0023052,GO:0030141,GO:0030166,GO:0030968,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0031984,GO:0032501,GO:0032502,GO:0032940,GO:0033554,GO:0034404,GO:0034620,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034656,GO:0034774,GO:0034976,GO:0035295,GO:0035580,GO:0035966,GO:0035967,GO:0036230,GO:0040008,GO:0040009,GO:0042119,GO:0042175,GO:0042221,GO:0042278,GO:0042454,GO:0042581,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043262,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045134,GO:0045321,GO:0046048,GO:0046128,GO:0046130,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046710,GO:0046712,GO:0046872,GO:0046903,GO:0046983,GO:0048565,GO:0048598,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055086,GO:0055123,GO:0060205,GO:0060465,GO:0065007,GO:0070013,GO:0070820,GO:0070887,GO:0071310,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:0097708,GO:0098827,GO:0099503,GO:0101002,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1904724,GO:1904813
KEGG Pathwayko00230,ko00240,map00230,map00240
KEGG ReactionR00155,R00328,R00961
KEGG koko:K12304,ko:K17300
KEGG rclassRC00002
Preferred nameCANT1
Seed eggNOG ortholog2880.D7G4A7
Seed ortholog evalue4.6e-222
Seed ortholog score776.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1560.3229.1prot_E-siliculosus-1a_F_contig1560.3229.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1560 2633..10443 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928072.1829565-UTR-E-siliculosus-1a_F_contig1560:1304..13691622928072.1829565-UTR-E-siliculosus-1a_F_contig1560:1304..1369Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1560 1305..1369 +
1696318795.3097508-UTR-E-siliculosus-1a_F_contig1560:1304..13691696318795.3097508-UTR-E-siliculosus-1a_F_contig1560:1304..1369Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1560 1305..1369 +
1622928072.1977143-UTR-E-siliculosus-1a_F_contig1560:2365..26321622928072.1977143-UTR-E-siliculosus-1a_F_contig1560:2365..2632Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1560 2366..2632 +
1696318795.3196888-UTR-E-siliculosus-1a_F_contig1560:2365..26321696318795.3196888-UTR-E-siliculosus-1a_F_contig1560:2365..2632Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1560 2366..2632 +
1622928072.313018-UTR-E-siliculosus-1a_F_contig1560:10443..115591622928072.313018-UTR-E-siliculosus-1a_F_contig1560:10443..11559Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1560 10444..11559 +
1696318795.400549-UTR-E-siliculosus-1a_F_contig1560:10443..115591696318795.400549-UTR-E-siliculosus-1a_F_contig1560:10443..11559Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1560 10444..11559 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928072.2091746-CDS-E-siliculosus-1a_F_contig1560:2632..28161622928072.2091746-CDS-E-siliculosus-1a_F_contig1560:2632..2816Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 2633..2816 +
1696318795.326942-CDS-E-siliculosus-1a_F_contig1560:2632..28161696318795.326942-CDS-E-siliculosus-1a_F_contig1560:2632..2816Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 2633..2816 +
1622928072.2195442-CDS-E-siliculosus-1a_F_contig1560:4296..44241622928072.2195442-CDS-E-siliculosus-1a_F_contig1560:4296..4424Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 4297..4424 +
1696318795.334247-CDS-E-siliculosus-1a_F_contig1560:4296..44241696318795.334247-CDS-E-siliculosus-1a_F_contig1560:4296..4424Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 4297..4424 +
1622928072.2317479-CDS-E-siliculosus-1a_F_contig1560:5202..53781622928072.2317479-CDS-E-siliculosus-1a_F_contig1560:5202..5378Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 5203..5378 +
1696318795.3415132-CDS-E-siliculosus-1a_F_contig1560:5202..53781696318795.3415132-CDS-E-siliculosus-1a_F_contig1560:5202..5378Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 5203..5378 +
1622928072.2441797-CDS-E-siliculosus-1a_F_contig1560:5896..59771622928072.2441797-CDS-E-siliculosus-1a_F_contig1560:5896..5977Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 5897..5977 +
1696318795.3508322-CDS-E-siliculosus-1a_F_contig1560:5896..59771696318795.3508322-CDS-E-siliculosus-1a_F_contig1560:5896..5977Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 5897..5977 +
1622928072.2559855-CDS-E-siliculosus-1a_F_contig1560:6691..68981622928072.2559855-CDS-E-siliculosus-1a_F_contig1560:6691..6898Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 6692..6898 +
1696318795.360516-CDS-E-siliculosus-1a_F_contig1560:6691..68981696318795.360516-CDS-E-siliculosus-1a_F_contig1560:6691..6898Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 6692..6898 +
1622928072.2665637-CDS-E-siliculosus-1a_F_contig1560:7816..79581622928072.2665637-CDS-E-siliculosus-1a_F_contig1560:7816..7958Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 7817..7958 +
1696318795.367706-CDS-E-siliculosus-1a_F_contig1560:7816..79581696318795.367706-CDS-E-siliculosus-1a_F_contig1560:7816..7958Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 7817..7958 +
1622928072.2780514-CDS-E-siliculosus-1a_F_contig1560:8510..86121622928072.2780514-CDS-E-siliculosus-1a_F_contig1560:8510..8612Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 8511..8612 +
1696318795.3750284-CDS-E-siliculosus-1a_F_contig1560:8510..86121696318795.3750284-CDS-E-siliculosus-1a_F_contig1560:8510..8612Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 8511..8612 +
1622928072.2881215-CDS-E-siliculosus-1a_F_contig1560:9582..97111622928072.2881215-CDS-E-siliculosus-1a_F_contig1560:9582..9711Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 9583..9711 +
1696318795.3822992-CDS-E-siliculosus-1a_F_contig1560:9582..97111696318795.3822992-CDS-E-siliculosus-1a_F_contig1560:9582..9711Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 9583..9711 +
1622928072.298402-CDS-E-siliculosus-1a_F_contig1560:10350..104431622928072.298402-CDS-E-siliculosus-1a_F_contig1560:10350..10443Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 10351..10443 +
1696318795.3897817-CDS-E-siliculosus-1a_F_contig1560:10350..104431696318795.3897817-CDS-E-siliculosus-1a_F_contig1560:10350..10443Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1560 10351..10443 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1560.3229.1

>prot_E-siliculosus-1a_F_contig1560.3229.1 ID=prot_E-siliculosus-1a_F_contig1560.3229.1|Name=mRNA_E-siliculosus-1a_F_contig1560.3229.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=414bp
MQAGEGEGESDSMFVNRPPPRGAFSTPSRTGALGGSGAGGGAVRSKWTIL
LVVLLIVAGIFVMPRFAGGGGGKLRGSTASSLAEGGPSKPDTWDILLISD
LDKKSKVDDKGKQYRSVLQAATLTRDPATNKFSMETGEATDLFSGHNEAG
RGMELSELINYRGSLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNL
DKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPQGVIS
RQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYD
DVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFKFVPGTGDQVV
VALKSEEIEELQTQTTFLMVFTLDGEVLLEETEIPGGFKFEGLEIFPIPA
SRADVAVAKGGNR*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1560:1305..11559+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1560.3229.1 ID=mRNA_E-siliculosus-1a_F_contig1560.3229.1|Name=mRNA_E-siliculosus-1a_F_contig1560.3229.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10255bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1560:1305..11559+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGAACCACGCACACGCCAACCGCGCTGCTCATCGTGTGTAGAGCAGCTAA GGCAGCGGCATCGAGGTGAGAGTGAGGGATTCATTCGTGGTGTATAATTT CCATGTTGGTGGACCATTGGCAACCAACTGGCTGTGCGAGAGAGGAGCGC GAGCATGGCTTCTTTTCGAATCAATCCGTTCGAATACAAAATCATTTGGG AACACAAACTTGGGGAACAAGATCACGATTGGGTGATCGATGTTCCGTGT GGCACACACAAGGCCACCTCCACTGGTAAAAGGTGTCACACGGTACACGG TACATTGTTGGTACTGCGATAGCTCCTGTGAGGCACGTGTCTTGCTCGCC AACTTGTCTCGGGAGTGGAAGCGGAACCGGTGGTGTAATGTACCTGGAGC TGCCGCAGTGTACTAGAGGCCACGTGACACGCGAGATTCGCACGAAAGGG CGGAGGAATTTTGCGGCATTTTCTCCGGCGACATTCGGCCGAAAATGTCC ATGATTTTTTTATTTCATGTCCCGGAGAGATGATGATCGCGTGGTCGCAC ACCCTCCTATGTAGGCTGAACTCCGAATCTCGAGTACTACACAACCCAGC GGGTGCGACGTCCAATCGATACGTACAATGACATCTACATACTCTTGCGA CAACAACATCTTCTCTCCAAGCTACAGCAGTATCATATGTATACTATAGC GTGAGTACATTGTACAATAGTATGCATATCAGAGATTGAGAGCGCGGGTT TTGTGGGATCTTGCAAGACCACCCCGGTAGCCTGTTTTCTCTGTGTATTA CACCATTTATTTAGCCGCTACACACCAGACGAGACCGCTGCGGTGGTGAT CAATGCCATGATGGTGTCGCCTTTTAATAGCACGGCTCGAATGACGGGTG CACTGCAGACACTATGTTTTTCCGTCCTGAAAGACCATCTATGCCTACCC GCCCTGACTCTGCAAAAATACGTGCATATGCATGTATGCATATCACTGCT GTCTACCATGTATCATATGCATGTTTGCACTCCCGCTCGCTGCTGCTGTG TCTTGCAGCAGACCACCACACCAAAACAATAAGCAGGAAACAAACAAGCG TTGCCAACGGGAGGGAGTAACGGAAGAGGAGGAATTTGCAGACAAGTCCA GCCGACGAAGACAACAAGGAGCCACGCACGCCGCCGCGGCGGGACATTTT TCTGCTTTCTCTTCCTCGCCAGAAGTGGTGTGGGTGCACGTCGGGTTGTA GAGAACCAAACCGCCCCCGTGTGCTGCTTGCCTGCCGTGCTACACAAAAA ACTCGAGCAGCGGCGGAGAAACTGATTGATGCAAGCCGGCGAAGGAGAGG GCGAGAGCGACAGCATGTTCGTCAACAGGCCGCCACCGAGGGGGGCATTC TCCACGCCCAGCAGGACGGGTGCTCTCGGGGGCTCGGGGGCGGGGGGCGG GGCCGTGCGGTCGAAGTGGACGATCCTGCTCGTCGTGCTGCTCATCGTCG CCGGCATTTTCGGTGAGAGAGAGAAATACCCAACAGATCAATTCTCAAAT TCTAGATAGCGATGTGCGGGACCTTCTGCTTGGCAGTACTCATTTACTAC AAATATATAATAGAGTTTTGTTAATTGGGCAGTCAGTCTGTCTGTCTTGC GAACGACTCCGACAACCACCTGCCCGGCCTTAGGGAAAAGTTGTCAGGCT GCCACCGAGGTCAGGACATCGAGCTTTTTTTTTCGTTGTCGTTGGAGCGA GAGTCGTCAGAATCTCCCCGCAAGACGCTCTCTCTCACGGAAGAGATTTG TCTCGGAGACAGCCAACCTTGCGCCGAGAATGCTGACGACAGCTTGCCGC AATGGCCGAAAAACACACACATGTCGACCCTGCCGAAACGGATGGGTGAG TGATGGGCAGACACCCGGATCCATACAAAGCTGCAACTTTTTTCTCGATT TTCCGGGTCTTTGGCGAGGTCGACAGCCCGCCAGACCGAAAAAAGAAAAA AAGACTGTCAGAAGCAAGAAACATTGGTGTTCCTCCCATTAACACCGGCG CGAAACGAACCTTCTTTCGTGTAAATCCGTCCCTTGTTTCCCCGGCTGGT GCGAGGAAGGTGTAGACTGCTGTCCTTGCTGGGACGAAAGCGCGCGCACT CACAACACGCACGTTTTCCACGCGCCCCGGCGGCCGTGCCATCTATGTCA CCGTCTCCGTGGGAAACTTGGGGTGCAATCAATTGTTCTTTGCTCTGTAG CACAGCCTCACACGGATGGTTGTTCCATGTATCTGGAGATCTGGAGCCAT GAGACGGAAACAAGACTGTTTTTTCTGTCAACGAGGGAAGAGAAAAAACT GGGCAGAACTCGTGAAACAAAACAGGAGAGTTGGGCTGCTTTGAGAGAGT AACACAAGCATTCGTGCTTCATTTCCCAGAATGGGGTTTGCCTTCTTAGA TGTGGAAAGCAAGGGCCACAGAAAGGCGAGTCCTTCCGGGCGACCGGACC GGTGTCGGTCCGGTATCGGAGTGCCGTTCCGTCCCCTTCAATAGAACCGG AAGACTTTTGGGGTTGGTGAAAAAGATACTACAAGGTCGGTCTGGAATGG GGTGGTCTTAGCCCCGAGTCATCTATGCCATGAACAACAGCACCTACCCC TGCGAAAGGTTTTACCTCCGGCGGTTTCAACAGGGCCCCCTCCTTACCCT GCTTGCCTCTGCGGCTGCCTCTGTCTCCGTCTTTTTTCTGCACCCCCTAT TCATGCGACTCGCCGAATACCTGACGGCGCTTCGCGCGTGGCGATTTGCT AGCCCGGTCCCGTGAAAACCCGGCGTGCTCCGTCCCAACGTTGTAGGGAT GAGAGATCATTACGAGTACGGCATGCACGGCTATGAGTAGACGGTCTATG TCTGCTTCTTTTCCGCTCGCAGTCTGTCGGTCTGCCTCCTAACGATTGCT CCCTCTGTCTATTGTCTCTCCCACCCCCCCCTGCTGCTGAAGTGATGCCT AGGTTCGCAGGAGGGGGCGGCGGCAAGCTCAGGGGCTCCACGGCTAGCTC GCTGGCGGAGGGAGGGCCCTCCAAGCCGGACACGTGGGACATTCTTTTGA TCTCGGACCTGGACAAGAAGGTATCGCCATTCCGTCGCGGCCAGCCTCAC AACCCGTCAAACCTGTAGAGAAAGGGAGGCTTTATGCAGAGCCGCTGCAC ATGCGAGGAGCGGCTGGCACCCTTGAGGGTTTTGTTGAAATGGTTTGAGA GAGCTGTGGGTTCAGATCCGTCCGTGAGGGTCTTAGAAATGCAATTTGGT TGGTGAGCATTCAAGGCGGGACAGCGAGTATTTCTATGGAGAAGAAAGAG GGTAAGGTACACCTGACGGAAGACATGTATGGCGGAGGAATGAAATCCTT CCTTGACTCTGTTTGAAAAGGTACTTTGGTTGTTAAGAGTTCAAGGTCTG GCGGTAGAATCGTGTGTCTAGAAAAGGGAATGCACAAGAGATACGCCTGC AGGCGTGCGTGGCAAAGAGACAGTTGTTCGTACGACAGATTATCTGCGTG AGGTCGGTTCGCGTCTTCTGACTCGAGAAGACAAGACCGCGCCTTTGGTG CTAGCTGCGAGCACGAGCTCGTCGTTTCGTCGCCGGGCGGCTGGGGGGAA AGGGAGGGGGGGGGTCATGTGCAGCCCACTCAGGGCGCGCAAGTGACCAC CACTCCCAGCTACACGTAGGCCGAACGTGCCACACGCACGAACAATCCTC TTAAAAATGTCATGACCGACCCCTTCCTTGAATCGCCACACCTTTCAGAC CCTAGACACACGTCCAGTCCATCACTGACCCCTTCGAACGAATTTTCGTA ACCGTCTTCCTCTGCAACCGCGACACGCCACCCTCGACGCCCCACCAGTC CAAGGTTGACGACAAGGGCAAGCAGTACCGGAGCGTGTTGCAGGCGGCGA CGCTCACCCGCGACCCCGCTACCAACAAGTTCTCGATGGAGACGGGGGAG GCCACCGACCTTTTCTCGGGGCACAACGAGGCAGGCCGGGGGATGGAGCT CAGCGAGCTCATTAACTACCGAGGGTAGGTATTAATGTTCTCTGTCGGGA GGCATTTGTTTTTTTTTTTTTGCTTGAAACTGACGTTTAGAAGAACGTTG GATGCTTTTGGTAGCTCGGCAAGCGACGGACGGGTCTCTAGCTAGACGCG TGGTAATAATAACAATTTCGAATCCGGACATTGTTGCTGTTTTTGGTGCT GGCACGACAACAGGTACCCCAGCTGTTGACGAGTATGACCTTCGGGGAAT ACTGACGTTGCGTGTAGGGCGACATGCAGCAGGACGACATATTTATGCGA AGATTTGCCTTCCGTGAGTGGCATGTGGGCAGCAGTACCAAGTTTGGTCC CCAAGACCTCTTCTGCTGACACCCCGGCACTGGAACTTTGATATAGCCAG GAGAACTTTGCTGCGGCGACAAATGGTGATTCCTCCAAATTGCGTGAAAT ACATTTCTCATGAGAGAAAGTCGCATTTGATGCGCCACCCATTTTGACGT ACGCGCACATGCACCGTGTGTCGTGCGCCACGTGTGTATCAGGTCGTTGC TGACGGTGGACGACCGCACGGGAATTGTCTTCGAGATCCTAGAGGAGCAG GGGGAGCGACACATGGCTCCGAGGTGAAGAGCTGTTGGCAGAACCATACG AGATTGCAGTACTGTAGCCCTCACAGGGTTTTTCGTTTACTGTAAGTACA CATGATGGATAAGGCGTGCAATCGGGGAAATTGGGATAATTGGGATAGGG TTTTGGTAAGGGATGTGGTGGGCATATCATATCCCCTCCCTTTTCTATTT CCTCCTAAACTTGTTAACTTGATTTCTCGCGAAGGCGATCCCGAGATTGA TAACCCAGCCATCTCTCGCCAGGAGGCAGACATATACCCACCCCTCCAGT TGTCCGGTGTCCATTTGATGAGTATGTTTATCGGTATCTGATGAGGACGA GGTAGGGTCAATGGGTGTGGTCTGTTTGGGGGCGCTGCTGGGCGAGATAC ACGCCTGATCAGCATATCTAGCACACTTGTTGACGGTGACTTGATGTATG TGTTACTTGTGACGAGCACAACAAAGGTGGTCGAAATTGTCGAAGGGGCT TCGGAAGAGGGGACCCCTTTGTGCTTTGCGTGTGTTGTGCGTGTGTCTCG ACGCTTGGTTGAGTGGGATCGATCGCTTCGCGGAAAAGCAGCTGGGCCAC TAAAAGCCAGTCCTCTCTTCAGCAGGATACAATAGTGCAAACTACCGCCT TACGATCGCTTTCACCAACCATGAATCGCGCTCAATCTATGTCGATGCAT GTACGTCTGCATGCCTGGCGTTGTCTTCCCTCGTCAGGTACATCTTGCCT GAGGGGGACGGCAACTTGGACAAGGGCATGAAGCTCGAGTGGGCCACGGA GAAGGACGGCTCCCTCGTGGTGGGCAGCTTCGGGAAGGAGTACACTGACA ACGACGGCCGCATCGTCAACACGAACAACAACTGGATCATCACGATAGAC CCGCAGGGGGTCATCAGCCGGCAGGACTGGACCAAGCAATACAAGTTAGT GCAAACAGCAAGGCGTTGCGTTGGCGCTTTGTTTTGTTCGGGGGGTGCCT GTTGCATTTGCGCAGTGTTTTTATTATTTTTTTTTGGTCGTGTGTCGGTT GTTTTTTTCCTTTTTTTTTGTCGGAGGACGAGCCCGAGATGTGTGAGGGT TTTGCTTACCTGCTGGCGGCCAACCGAACAGGTGTTCGCCCTCTCTTGTA CTGTAGCATAGCTTTGCTTTAGCACACGCGGTGCAAGCGTTGCTGTCTTC CCCTCGGGTGATGCATGACACATGACACATGATGACCGCCAGGCACACGG CGTGTCTTGGGATTGCTTGGATGGGCGTGGCGACATCACAGCCCCGACCT GTTTGCCTCGCCCGAATGGGAACACGCCCGCCCGTGTTTTTGTGTCTCTG TGCTACCCCCTCCACAGAGTTCCCCTTGGATGTCCTCCCCAAAATCGAGA AACTAAAATGCAACAAACGTTAAGTAAACACCTCCCTTGAATTGTGGGGC GGGGGGCGGGGGTAGACACAAATGAGCGTATCGCCGATCACACCATACTA CTGTAGCACGCCAGCAGCGTTCGTGTGCTCTTCGTCTTATGTACCCTTCG TCTTATGTTGAGCGTTGGAGCTCCCCCCTAAATGCCCTAATGCACACACC ACGCAGCTCACCCTCTGAAACTCATTCCCGTGAGTCGGGAGGTTTTCGTG CGTGTGCTCACGTGGTGACCAGCGAGCTATCTAGCTGTCCCGCCGTACCC CTACCTCTGACACCACCCCATCTCCTCGTCCAACCCCTGGCTGTTCTCCC CCCGCGCCTTGCGTTTGCGTGTGTGTGTTTGTTTTTTGTTCGTGCTGCGT GTGCGTGCTCCGTTCTCCGTTGGCCTGCGCGCTTGGGCTTGGGCTTGGGC TAACACCTCCAGCACGCTGCGCGATAAGGTTGGGGCGACCTTCCCCGGGT ACATGATCCACGAGTCCGCCGCCTGGAGCGACGCCCTCAACAAGTGGGTC TTCCTGCCCCGCCGCATCAGCTCGGAGAAGTACGACGACGTTAGGGACGA GAAGGTGCGAGTGACCCAACCCGACGGTCGACACCCGGCAGCAGGCGCAG AAGAGGGATGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGCCGTTGCCTG CCGTGTTTTTTCATGCGATGCCGTGTGGTATTTGTGGTTGAAATTGATGT CGGTGTTGACTTGTTTTGATGAGTTGGCTTGCTGGATGGGTTCTGATCGC TGCCGATCTACCTAGTTCATTCATCATGGCCTTCTTTTTTTTTAATGCCG GACACCGACTCCGGTCGGCCCGTTTTTGCATCGCGGACAAACTTGACTTG TGCTGCCGAAAGTTGTCAATATTGCTCCCATGTGCATCGTCGCAATCCCA TCGACTCCCACTTGCACATAGAGAGGGACATCGACACTTGCAACCCTCTA TGCATAAAATGTCCTACCCCACGTTTCCCTTTTTCGTGGTATACGATAGG CTCTGGCACCATCTCTATTTCTTCTGGTGTGTATTCCCCTCTTGTTGAAG CATTGCCACCGTGTTGTGGATGAACGTTGCTCGTTTGTCTTTTTTTTTTT TTTTAGATGGGGTCGAACACGATCCTCATCGTGGACGAAGACTTCCGAAA AGTGGACGTGAGACACGTGGGTGACATCGTCGAGACTCACGGGTTCTCCT CTTTCAAGGTGTGTGTGCGTGGGGGGGGGGTGGTGCTGCTCGTCCCGTTC TGTACCTTGTGCTGCTAGCCCAACGCTTGTGTGGTGCCTGGCTATCTCCC ATGCCCTCGCGCGGTTGATGTAGTTGGTGACACTCTCTGTTGCCACCATC CATTGTGCCAACCAATCGGGATTACGTTACATGGGGGCGACCCAGAGACC CAAGGGTGCGATTGGTATGTGACCCTTGCGTCAACAACGCCGCGTAATCG CTTCCAACTCCGGAACACCTCGTGCCTTTTGTGGCGGTGGTATGTGCCGG CTGTCAGGCAGGGATGGAAAAAAGAGTGTCACGAAGATGGGAGGGGGGAA CGTTCCTAGAAACGTTCGTTTCACATTTGTCGATCCCGTCTCGGCCCGCC CGACAGCGACCCGCCACAATAGGTGCAGCGTGTTCCGCGGCGATAAAACG ATTTCGGCAGAAGAGTTGAGGTGGAAGATGACACTGATGTCTATTGTGGG CTGCCCGTTGTCACCATCTACACTATCACCGTGTGTGGCATGACATAAGA TACTACACCCCCTGGACCAATTCTCAACAATACACTTCTTCCACGACGAA GAAGGGTGTATGAAGTATATTTTATACGTTTTCGGAAAGCTCTTGAGGAG ATGGCTCCAAGGCCGCCACTTTTTCAGCGCCGCCAGTCTCTGCTGTGGAA TGGAGAATTAGAGCGCTACAATATGGTCAAGGGGTTGTGATCTCTTGTGT CACCTACAGCGGTATACCGTACGGAACGAAACAAAGCAACACTTGCAACG TGTCCGGTGCGATCGCACGATGCGAGGGCGCGGGACACAATCCCGACCGT TGACGGCACACACTCCACCCCCTTTAACGCTGCGTAACCCCCCTCCCCCC GCCGTCTCTCGCGTTTCGCTCCGCGTCGTCCCCCCTCCCCGTCCGATACG AACGAACGAATGAAAAAACAAAAAAAAGTTTGTTCCCGGAACGGGGGACC AGGTAGTGGTGGCCCTCAAGAGCGAGGAGATCGAGGAGCTGCAGACCCAG ACCACCTTCCTGATGGTCTTCACGTTGGACGGGGAGGTTCTTCTCGAGGA GACCGAGGTGGGATTTGTTCCTGGTTGTTTTGTGTCGTCGCAGTATACAG TGCTCCTTGCGGTTCCTGGTGGTATTTTGGCTTGGAAGTGCAGTACAAGT AGTTGTTTTGGGTTGCAGCGCTCGTTGCGACGGGGTGAGTTTTTGCTTTC TTGGTACGCTGAGAGAGGTGTAGCGGGGCGGGGGGGCTGAGTTGGAGAGT CGAGACTGCGAACAGGAGGAGGGGGGGAGTTTGCGTGACCGCGCGTATCG GTCGAGAATCCTGGGCTCGCAAAAGGGCGTGTACCCTGTTTGTTGTTGCC CCCCTCGCTAGATGTCGATGTTGTTGCTGTTGGGCATGTTTACCGCGGTC AGCGTGTGCGTTGTTCATGACTGGGTTCGCCGTTGGAAACGGGAAGCGCC CTTTCTCACAGACGACACAAGACACACACACACACACACACTCGAGCGCC TGTTTTCCCCAATAGAGCGCCACCTTCGGCCGGGGAACATGTCTAGTCAG ATGCTCATTTTTCGCGCGTTTCTAAGGATGACGTTTTGCATCGGTTAAGA CCAGGCTTGGCGTCAAGCTTCTTGTCGCCAATTTTCACTATCGCCGCCCG TTTTCCCTTTCCTTTTCTGTGCAACATGGGATGTCCACCCGAACAGATTC CTGGCGGTTTCAAGTTCGAAGGGCTGGAAATCTTCCCGATCCCCGCTTCG AGGGCGGACGTGGCCGTGGCGAAGGGAGGCAACAGATAAAACAACAGCAA TACGCATTCGCGCTGTCGCCTTTTTTTTCTTGAAACGGTCAACAACCCAA GGCAAAAACGAAACCCCGCCATCCTCGTCCGTTTTACCATCCGACCGTGT TACGCGGGAGATACAGTAGTAGTTGCGCTGTGAATTTCGGGGCTCTCTGT CTCTCGATTCAGCAGGGAAATCGGCGGGAAGGCTCGCTCATCAGGTTGTC GTTCGGCGCGGTTTTGTTCTAGTCGAGGCCCGCGACAGTGGCAAAGGGGA GAGGGGGAGGGGTGTTAGTTCTTATGGTCTGTAGGTCAACTTTGCTGCAA CGGAAGAGGCGGGGGGGGGGAAGGGAGAGCACCGGTGTTGACGTTTCATG ACCCTTCTCGATGTTGAAAGGTTTGGGTACCACCTCCTGACGGTGTTACA ACGTCCCACCTTACGTTTGTGCAATTTTGGCTTGGGGAGGCTTCATGCGA AGTACTCGGTCCAGCGAAATCCCCGCATGTCCGCGGCAACGCCCTTGTGG ATTTGCTTCTTTTTTATTTTTTGCTGTCATGGGTTCGGCAATAGGGAACC TCGAACCCATCTTCTAAAGGGCGTTCCTCAACTTGTCTTCGCTTCGGAAA TGTCGGGTTGTTAGGCGGCATACCCGTGTAACGGCGTGCTCCGACATCAA GAGGGCTTGTTGACCTCCAGTCTCACAGCATCATGTCTCGTCTGTCAGGC GGGCGTTGTGGGGAGCTAGGAGAGATCAATCACGTCTTGGACCTCCAAGT GCAGAGGCGGTCGGTTTCGTGTTTGCGTGTAATACCACGCCACGCTTCGA GGCTGAACCGCGACGGGGGAGGGCCGAAAAAATGCGCAATTTACCCGTGT GCGTGGGCGGTGGCTTATCGTGATGTCTTCTCGGGTACGCTCAAGCGTTG TTGCTGGGGGTGTTGCTACAACAGAGCGACGAAGTGTTTGGTTCGGTTTG GGGAATGCTGGGAGCTCGCTTATCATGAGTGTCTCCCCGTCTCTTGCTGC GGCTGTAGCTGTTGTGGTTGCCGCCGCTGCCGCCGCTCTATTTTGGTGCC ATCGCTGATGTGCCAGCTGTAGCTCTAGCTTCTTTTGTTTTTTTTCGTGT ACTCA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1560:1305..11559+

>mRNA_E-siliculosus-1a_F_contig1560.3229.1 ID=mRNA_E-siliculosus-1a_F_contig1560.3229.1|Name=mRNA_E-siliculosus-1a_F_contig1560.3229.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2484bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1560:1305..11559+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCAAGCCGGCGAAGGAGAGGGCGAGAGCGACAGCATGTTCGTCAACAG
GCCGCCACCGAGGGGGGCATTCTCCACGCCCAGCAGGACGGGTGCTCTCG
GGGGCTCGGGGGCGGGGGGCGGGGCCGTGCGGTCGAAGTGGACGATCCTG
CTCGTCGTGCTGCTCATCGTCGCCGGCATTTTCGATGCAAGCCGGCGAAG
GAGAGGGCGAGAGCGACAGCATGTTCGTCAACAGGCCGCCACCGAGGGGG
GCATTCTCCACGCCCAGCAGGACGGGTGCTCTCGGGGGCTCGGGGGCGGG
GGGCGGGGCCGTGCGGTCGAAGTGGACGATCCTGCTCGTCGTGCTGCTCA
TCGTCGCCGGCATTTTCGTGATGCCTAGGTTCGCAGGAGGGGGCGGCGGC
AAGCTCAGGGGCTCCACGGCTAGCTCGCTGGCGGAGGGAGGGCCCTCCAA
GCCGGACACGTGGGACATTCTTTTGATCTCGGACCTGGACAAGAAGTGAT
GCCTAGGTTCGCAGGAGGGGGCGGCGGCAAGCTCAGGGGCTCCACGGCTA
GCTCGCTGGCGGAGGGAGGGCCCTCCAAGCCGGACACGTGGGACATTCTT
TTGATCTCGGACCTGGACAAGAAGTCCAAGGTTGACGACAAGGGCAAGCA
GTACCGGAGCGTGTTGCAGGCGGCGACGCTCACCCGCGACCCCGCTACCA
ACAAGTTCTCGATGGAGACGGGGGAGGCCACCGACCTTTTCTCGGGGCAC
AACGAGGCAGGCCGGGGGATGGAGCTCAGCGAGCTCATTAACTACCGAGG
TCCAAGGTTGACGACAAGGGCAAGCAGTACCGGAGCGTGTTGCAGGCGGC
GACGCTCACCCGCGACCCCGCTACCAACAAGTTCTCGATGGAGACGGGGG
AGGCCACCGACCTTTTCTCGGGGCACAACGAGGCAGGCCGGGGGATGGAG
CTCAGCGAGCTCATTAACTACCGAGGGTCGTTGCTGACGGTGGACGACCG
CACGGGAATTGTCTTCGAGATCCTAGAGGAGCAGGGGGAGCGACACATGG
CTCCGAGGTCGTTGCTGACGGTGGACGACCGCACGGGAATTGTCTTCGAG
ATCCTAGAGGAGCAGGGGGAGCGACACATGGCTCCGAGGTACATCTTGCC
TGAGGGGGACGGCAACTTGGACAAGGGCATGAAGCTCGAGTGGGCCACGG
AGAAGGACGGCTCCCTCGTGGTGGGCAGCTTCGGGAAGGAGTACACTGAC
AACGACGGCCGCATCGTCAACACGAACAACAACTGGATCATCACGATAGA
CCCGCAGGGGGTCATCAGCCGGCAGGACTGGACCAAGCAATACAAGTACA
TCTTGCCTGAGGGGGACGGCAACTTGGACAAGGGCATGAAGCTCGAGTGG
GCCACGGAGAAGGACGGCTCCCTCGTGGTGGGCAGCTTCGGGAAGGAGTA
CACTGACAACGACGGCCGCATCGTCAACACGAACAACAACTGGATCATCA
CGATAGACCCGCAGGGGGTCATCAGCCGGCAGGACTGGACCAAGCAATAC
AACACGCTGCGCGATAAGGTTGGGGCGACCTTCCCCGGGTACATGATCCA
CGAGTCCGCCGCCTGGAGCGACGCCCTCAACAAGTGGGTCTTCCTGCCCC
GCCGCATCAGCTCGGAGAAGTACGACGACGTTAGGGACGAGAAGCACGCT
GCGCGATAAGGTTGGGGCGACCTTCCCCGGGTACATGATCCACGAGTCCG
CCGCCTGGAGCGACGCCCTCAACAAGTGGGTCTTCCTGCCCCGCCGCATC
AGCTCGGAGAAGTACGACGACGTTAGGGACGAGAAGATGGGGTCGAACAC
GATCCTCATCGTGGACGAAGACTTCCGAAAAGTGGACGTGAGACACGTGG
GTGACATCGTCGAGACTCACGGGTTCTCCTCTTTCAAGATGGGGTCGAAC
ACGATCCTCATCGTGGACGAAGACTTCCGAAAAGTGGACGTGAGACACGT
GGGTGACATCGTCGAGACTCACGGGTTCTCCTCTTTCAAGTTTGTTCCCG
GAACGGGGGACCAGGTAGTGGTGGCCCTCAAGAGCGAGGAGATCGAGGAG
CTGCAGACCCAGACCACCTTCCTGATGGTCTTCACGTTGGACGGGGAGGT
TCTTCTCGAGGAGACCGAGTTTGTTCCCGGAACGGGGGACCAGGTAGTGG
TGGCCCTCAAGAGCGAGGAGATCGAGGAGCTGCAGACCCAGACCACCTTC
CTGATGGTCTTCACGTTGGACGGGGAGGTTCTTCTCGAGGAGACCGAGAT
TCCTGGCGGTTTCAAGTTCGAAGGGCTGGAAATCTTCCCGATCCCCGCTT
CGAGGGCGGACGTGGCCGTGGCGAAGGGAGGCAACAGATAAATTCCTGGC
GGTTTCAAGTTCGAAGGGCTGGAAATCTTCCCGATCCCCGCTTCGAGGGC
GGACGTGGCCGTGGCGAAGGGAGGCAACAGATAA
back to top