mRNA_E-siliculosus-1a_F_contig1553.3206.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A6H5JG58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG58_9PHAE) HSP 1 Score: 1071 bits (2771), Expect = 0.000e+0 Identity = 653/754 (86.60%), Postives = 659/754 (87.40%), Query Frame = 2
Query: 284 MTGKAKHWSLVNSSGCPTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRLPPSAPPAPRAAQKTAAAXXXXXXXXXPTAISPPVAVAS-CDAPLPGXXXXXXXXXXXXXXXXXVIGQPQDLVGSAEPVGRRNSSRAVDGRFRRTLSADAAGMVTAAAARENKPSGFRGGGLGRRASASATEFAEXXXXXXXXXXXXXXXXXXXVPQEXXXXLQLXXXARQESPPXXXXXXXXXXXXXGRERWRRRGQRLWRQTSSVERAGGGNEGNATTPRLRGRGRLSWGQGWAAGRLQGLWGGXXXXXXXXXXXXXXXXXXXXXNRAPSPPAPVAPFSLPRXXXXXXXXXXXXXXXXXXXXXAVPVVGEKLSWASLPSGQGGSAAFAADAEEAGRATPSSPTGRSFHCAFFHGGACYVTGGSDGARKFGDMWRFCARETPPPLTTLAXXXXXXXXXXXXXXXXXXRVGCAGGDGKCELAGLPGELREALQRLNMQAEVVL 2542
MTGKAKHWS+VNSSGCPTARSGHCATVARDALYVFGGCGHP AASSA+AASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPP RAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDL TGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPL AGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRLPPSAPP PRAAQKTA XXXXXXXXX CDAPLP XXXXXXXXXXXX VI QPQDLVGSAE VGRRNSSRAVDGRFRRTLSADAAGMV A AARENKPSGFRGGGLGRRASASATEFAE XXXXXXXXXXXXXXXX VPQ+ Q XXX ESPP XXXXXXXXGRERWRRRGQRLWRQTSSVER GGGNEGNATTPRLRGRGRLSWGQGWAAGRLQGLWGGXXXXXXXXXXXXXXX NRAPS XXXXXXXXXXXXXXXXXXX AVP+VGEKLSW SLPS Q GSAAFA + AGRATPS+PTGRSFHCAFFHGGACYVTGGSDGARKFGDMWRFCARETPPPLTTLA VG AGGDGKCELAGLPGELREALQRLNMQAEVVL
Sbjct: 1 MTGKAKHWSVVNSSGCPTARSGHCATVARDALYVFGGCGHPTAASSASAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPTRAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLATGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRLPPSAPPVPRAAQKTAXXXXXXXXXXXXXXXXXXXXXXXXCDAPLPXXXXXXXXXXXXXAA---VITQPQDLVGSAEAVGRRNSSRAVDGRFRRTLSADAAGMVPAVAARENKPSGFRGGGLGRRASASATEFAEQXXXXXXXXXXXXXXXXQQVPQQQVPQXQRXXXXXXESPPEAAQAXXXXXXXXGRERWRRRGQRLWRQTSSVERVGGGNEGNATTPRLRGRGRLSWGQGWAAGRLQGLWGGXXXXXXXXXXXXXXX------NRAPSXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXPAAVPMVGEKLSWVSLPSDQRGSAAFATNTGAAGRATPSAPTGRSFHCAFFHGGACYVTGGSDGARKFGDMWRFCARETPPPLTTLAARAFVSGATARRNGGGRGSVGGAGGDGKCELAGLPGELREALQRLNMQAEVVL 744
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: D8LLR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR4_ECTSI) HSP 1 Score: 469 bits (1207), Expect = 4.700e-151 Identity = 320/753 (42.50%), Postives = 324/753 (43.03%), Query Frame = 2
Query: 284 MTGKAKHWSLVNSSGCPTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRLPPSAPPAPRAAQKTAAAXXXXXXXXXPTAISPPVAVASCDAPLPGXXXXXXXXXXXXXXXXXVIGQPQDLVGSAEPVGRRNSSRAVDGRFRRTLSADAAGMVTAAAARENKPSGFRGGGLGRRASASATEFAEXXXXXXXXXXXXXXXXXXXVPQEXXXXLQLXXXARQESPPXXXXXXXXXXXXXGRERWRRRGQRLWRQTSSVERAGGGNEGNATTPRLRGRGRLSWGQGWAAGRLQGLWGGXXXXXXXXXXXXXXXXXXXXXNRAPSPPAPVAPFSLPRXXXXXXXXXXXXXXXXXXXXXAVPVVGEKLSWASLPSGQGGSAAFAADAEEAGRATPSSPTGRSFHCAFFHGGACYVTGGSDGARKFGDMWRFCARETPPPLTTLAXXXXXXXXXXXXXXXXXXRVGCAGGDGKCELAGLPGELREALQRLNMQAEVVL 2542
MTGKAKHWSLVNSSGCPTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSE GGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDL TGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPL AGGGKALLEWER AP+P TAAAA AP+ AVPVVGEKLSW SLPSGQGGSAAFAA+AEEAGRATPSSPTGRSFHCAFFHGGACY+TGGSDGARKFGDMWRFCARETPPPLTTLA RVG AGGDGKCEL GLPGELREALQRLNMQAEVVL
Sbjct: 1 MTGKAKHWSLVNSSGCPTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSE---------------------------------------------------------------------GGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLATGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWER--------------------------------------------------------------------------------------APVPS-------------------------------------------------------TATAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------APA---------------------------------AVPVVGEKLSWVSLPSGQGGSAAFAANAEEAGRATPSSPTGRSFHCAFFHGGACYITGGSDGARKFGDMWRFCARETPPPLTTLAARAFVSGATARRNGGGRGRVGGAGGDGKCELGGLPGELREALQRLNMQAEVVL 350
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A836CLJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ1_9STRA) HSP 1 Score: 181 bits (460), Expect = 6.020e-45 Identity = 114/297 (38.38%), Postives = 143/297 (48.15%), Query Frame = 2
Query: 332 PTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRV-GRAAYIWGGFTSGMELDSTFCALRL 1219
P+ RSGH + Y+FGGCG A CL DLH +D+ RW V R A+ PA R AAMCA + + R LSGGAGDDP LR + F R W L EG A P S C ++ ++ FGGSTG EY N ++L T W LAT G RP+PRYKHQAF+ MYV+GGG F+P D+DV+RL L + W +V G+ P R AH A+D G A Y+WGGFT+G++ F L L
Sbjct: 76 PSPRSGHTVCLVGGKAYLFGGCGRSAGVEDK----------------CLNDLHSFDVETLRWERVE--TRGAEQ------PAVRRSAAMCALD----DGRFLLSGGAGDDPDHLRSDLYLFVTHTRVWTKLLEGPEAKPFCLCG-QSACL----------WQDTILFFGGSTGLEYSNALHQYNLKTNRWQQLATLGPRPTPRYKHQAFIHGSSMYVIGGGCFKPLCEDIDVHRLDLTT------MTWRQVATRGSVPMARVAHTCAYDSSEGGAVYMWGGFTAGLQCLRNFYRLSL 327
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A836CMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ1_9STRA) HSP 1 Score: 167 bits (423), Expect = 5.520e-41 Identity = 96/218 (44.04%), Postives = 116/218 (53.21%), Query Frame = 2
Query: 569 RPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRV-GRAAYIWGGFTSGMELDSTFCALRL 1219
RPA R AAMCA + R LSGGAGDDP LR + F R R W +L EG A P + C R ++ FGGSTG EY N+ ++DL T W LAT G RP+PRYKHQAF+ D MYVVGGG F+P D DV++L L +EW V G P R AH A+D G A Y+WGGFT+G++ F L L
Sbjct: 22 RPAVRRSAAMCAV----GDGRFLLSGGAGDDPDHLRSDLYMFDTRTRTWTMLLEGDDAKPFCLCGQSACC-----------WRGTVLFFGGSTGLEYSNELFSYDLRTNRWQQLATKGPRPTPRYKHQAFIHNDCMYVVGGGCFKPLCEDTDVHKLDLLT------MEWTTVATKGAVPMARVAHTCAYDSTDGGAVYMWGGFTAGLQCLRNFYKLAL 218
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 164 bits (415), Expect = 4.770e-40 Identity = 106/305 (34.75%), Postives = 144/305 (47.21%), Query Frame = 2
Query: 299 KHWSLVNSSGC-PTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCA 1210
+ W + +SG P+ RSGH V +Y+FGGCG A + CL D++ +DL RW V +A + P+ R MCA A + + ++GG G + LR EF R + W + G APS R G T+ + L++FGGSTG Y ND +++ T W LATTG+RPSPRYKHQA + D MYV+GGG F+PE +D+YRL L L W+ G PR R AH ++D Y+WGGFT + F A
Sbjct: 28 QQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAIN-----------------CLNDMYTFDLDSHRWETV--------TAKGDSVPSARASFGMCAGP---AANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPS---------RFYGQTVCRYGSV--LLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRT------LVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFA 287
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.030e-39 Identity = 108/297 (36.36%), Postives = 140/297 (47.14%), Query Frame = 2
Query: 332 PTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRLP 1222
P+ RSGH V + LY+FGGCG A + CL D++ +DL R W + P R E P R AMC+ G D E L ++GG G + LR +F R R W L+ G APS + G T+ + L++FGGSTG Y ND +++ T W L T G RPSPRYKHQA + DFMYV+GGG F+PE +D+Y L L L W + R G PR R AH ++D Y+WGGFT + F A P
Sbjct: 45 PSPRSGHDVAVVGNKLYLFGGCGGENDAIN-----------------CLNDMYTFDLDRHVWELI--PHRG------EEMPTARASFAMCS--GPD-EKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPS---------KFYGQTVCRYG--DVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRT------LVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAP 296
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A7S3ULU8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3ULU8_HETAK) HSP 1 Score: 155 bits (393), Expect = 1.400e-38 Identity = 104/306 (33.99%), Postives = 144/306 (47.06%), Query Frame = 2
Query: 311 LVNSSGCPTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLGTGTWTA-LATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRLPP 1225
+V + P RSGH +++FGGCG +E C+ D ++L+ WS+V+ A+ + PR + C D L ++GG G + + G E+ R R WR L A + S CR G T R LV+FGGS+GHEY + FDL T + +ATTG+RPS RYKHQA + D +YV+GGG+++P P LD++RL L WERV G P R AH A+D RA Y+WGGF + +E + F L L P
Sbjct: 5 VVFTGSMPGERSGHSVLAMNGQVFLFGGCGG-----------------SEGNTPCMSDFICFNLSTLTWSKVQ-----AEGTTPSPRASFEMCRGCL-------PDTLIIAGGTGSE--GICGDMHEYNARTRRWRQLV--------ARDDPGSRCRYYGQTACPWGDRT-LVLFGGSSGHEYTDHLYTFDLETLRFAGPVATTGDRPSARYKHQAVVVGDELYVLGGGAYKPTAPQLDIFRLDLTR------WHWERVAAAGAAPPARVAHTCAYDPRSRALYLWGGFDAELERLNDFYRLDLDP 264
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A7S3XN17_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN17_HETAK) HSP 1 Score: 126 bits (316), Expect = 1.070e-26 Identity = 91/301 (30.23%), Postives = 133/301 (44.19%), Query Frame = 2
Query: 305 WSLVNSSG-CPTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCC----WEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGST-GHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTP-PRCRAAHGLAWDRVGRAAYIWGGFTSGM 1186
W ++ G P RSGH + +Y+FGG G P+ L D++ +DL +RW+ ++ DS P RT AMC D +D +FL GG +DL+G ++F + R W + + R G + + +N L+ FGG G + N+ DL T W+ L TTGE P RYKHQA L D +Y+VGGG + P ++D + L L + W ++ +G P RAAH +D VG A Y+WGGF +
Sbjct: 100 WKTLHQVGQVPCERSGHAVVLVGSTVYLFGGYGGSE-------------------PVHLADINSFDLETRRWNRIK------DSGDV---PCPRTAFAMCW----DKQDSIFLWGGTD---HDLQGLADQEVYQFHIHARKWERVVTRNRGILNL--------RYFGRSAT--AYKNSLLFFGGGVKGGRFTNELLQLDLDTMVWSRLETTGEAPCARYKHQALLVQDKLYIVGGGCYLPPTEEIDAFCLDLRT------MVWAKLAMSGAALPEGRAAHTCEYDPVGHALYMWGGFNKSL 349
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A7S2UXP7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP7_9STRA) HSP 1 Score: 122 bits (305), Expect = 6.330e-26 Identity = 90/294 (30.61%), Postives = 131/294 (44.56%), Query Frame = 2
Query: 335 TARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLY--EGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGME-LDSTFC 1207
+AR H V Y+FGGC P ++ + C DL +D +R +++ A E +P+ R AMC +G D + L L+GG GDD RG WE+ R W L+ +GG A+ CR G ++ L+ FGGS+G Y N+ FD+ T + L T G P RYKHQA + + M++ GGG++ P ++DV+ L L W +V G P+ R AH D + Y+WGGF + + L FC
Sbjct: 15 SARCDHGVVVLGPYAYIFGGCTGPVSSMA-----------------CSPDLICFDFKARRCIKIK-------CAGE--KPSGRASFAMC--KGPD-KGTLILAGGTGDDGLP-RGDIWEYNSLSRKWNRLFLSDGGLASTF--------CRLYGQSVC--CYGRSLIFFGGSSGKCYSNEVFKFDVDTLQYEQLKTKGTAPYARYKHQANIVGNKMFIFGGGNYLPSTKNIDVFCLDFET------LRWNKVNALGQEPQARVAHTTVMDEISNKIYLWGGFNTSLNRLQDFFC 262
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Match: A0A7S3UWF1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWF1_HETAK) HSP 1 Score: 117 bits (293), Expect = 3.810e-24 Identity = 93/307 (30.29%), Postives = 129/307 (42.02%), Query Frame = 2
Query: 305 WSLVNSSG-CPTARSGHCATVARDALYVFGGCGHPAAASSAAAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPARAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGC----CWEFCVRRRAWRLLYEGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGST-GHEYFNDTQAFDLGTGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLAAGGGKALLEWERVRPT-------GTPPRCRAAHGLAWDRVGRAAYIWGGFTSGM 1186
W V+ SG P RSGH VA+ Y+FGG G A P L D + +D A+ W VR P P RT AMC + +D ++L GG +DL+G +E+ V W L+ + + R G + + + +++ FGG G + N+ DL + W + TTG+ P PRYKHQA + D +YV+GGG + P LDVY L L W +V G P RAAH +D A Y+WGGF G+
Sbjct: 52 WEKVSCSGEMPCERSGHAVIVAQGKAYLFGGYGG-------------------ANPCHLSDFYSFDFAKGAWETVRAPGG----------PCPRTAFAMCVT----PDDFVYLWGGTD---HDLQGLEDQELYEYDVYNSRWSLV--------DTVNKGILDLRYFGRSASY--YKRKILYFGGGVKGGRFTNELIQLDLDSFRWERVPTTGDLPCPRYKHQACVVGDRLYVLGGGCYLPPEETLDVYCLDLTT------RVWAKVGAAAAAADGGGELPEGRAAHTCEYDAATGALYLWGGFNQGL 306 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1553.3206.1 >prot_E-siliculosus-1a_F_contig1553.3206.1 ID=prot_E-siliculosus-1a_F_contig1553.3206.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3206.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=754bp MTGKAKHWSLVNSSGCPTARSGHCATVARDALYVFGGCGHPAAASSAAAAback to top mRNA from alignment at E-siliculosus-1a_F_contig1553:16391..21254+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1553.3206.1 ID=mRNA_E-siliculosus-1a_F_contig1553.3206.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3206.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4864bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1553:16391..21254+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1553:16391..21254+ >mRNA_E-siliculosus-1a_F_contig1553.3206.1 ID=mRNA_E-siliculosus-1a_F_contig1553.3206.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3206.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4524bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1553:16391..21254+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |