mRNA_E-siliculosus-1a_F_contig1553.3204.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1553.3204.1
Unique NamemRNA_E-siliculosus-1a_F_contig1553.3204.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: D8LLR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR2_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 2.360e-80
Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 1
Query:    1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKK----KRYSAGLVSLIRCCLVVDPARRPTIGQV 414
            RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPK ELQ+AN+DIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKK    KRYSAGLVSLIRCCLVVDPARRPTIGQV
Sbjct:  152 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPK-ELQLANEDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKKIPQEKRYSAGLVSLIRCCLVVDPARRPTIGQV 292          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A6H5JEL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL9_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 2.150e-70
Identity = 122/140 (87.14%), Postives = 127/140 (90.71%), Query Frame = 1
Query:    7 LKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKK----KRYSAGLVSLIRCCLVVDPARRPTIGQV 414
            + VDNLLVGRDGLIKLCDFGSCSTQHKA+LS K+ L IA++DI RNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVD   ILKGLGDKK     RYSAGLVSLIRCCLVVDPARRPTIGQV
Sbjct:  137 MAVDNLLVGRDGLIKLCDFGSCSTQHKAFLSRKEAL-IAHEDILRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDLEGILKGLGDKKIPQEHRYSAGLVSLIRCCLVVDPARRPTIGQV 275          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A835YQI3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI3_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.200e-37
Identity = 69/142 (48.59%), Postives = 101/142 (71.13%), Query Frame = 1
Query:    1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLG----DKKKRYSAGLVSLIRCCLVVDPARRPTIGQV 414
            RDL+V+NLLV   G ++LC+FGSCS +H+++ + + ++ +A ++IRR T  AYR+PEQVDL  GH+VSE+VDIWA+GV+L KLAF  TPFED++G+V   AIL G       +   YS+GL +L++ C+   P  RP+  Q+
Sbjct:  153 RDLRVENLLVDVRGRVRLCNFGSCSLRHRSFAASR-DIALAKEEIRRRTAPAYRAPEQVDLHLGHMVSERVDIWAVGVLLHKLAFGATPFEDSRGDVQNLAILGGFRVDRLPEAHPYSSGLCALLQLCMNPIPQARPSCAQL 293          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A835YHI7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.940e-37
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 1
Query:    1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKG 315
            RDLKV+NLL+G DG  KLCDFGSCS  H+A+   + +  +A ++IRR TT AYR+PEQVDL  GHVVSE+VD+WALGV+LFKLAF  TPFED +G+V    IL G
Sbjct:  154 RDLKVENLLIGADGRCKLCDFGSCSVTHRAFAGAR-DAALAKEEIRRRTTPAYRAPEQVDLHLGHVVSERVDVWALGVLLFKLAFGATPFEDARGDVQNLGILGG 257          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: F0ZZW8_DICPU (Protein kinase domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZZW8_DICPU)

HSP 1 Score: 131 bits (329), Expect = 1.390e-32
Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 1
Query:    1 RDLKVDNLLVGRD-GLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKKKRYSAGLVSLIRCCLVVDPARRPTIGQVGNPVAVF 435
            RDLKV+N+L+  + G+ KLCDFGS +TQ   ++  K ++QIA DDI+R+TT  YR+PE VDL++ +V++EK+DIWALG +L+KL F+ TPFED+ G++  G +          YS  L++LIR  L  DPA RP I ++ N +   
Sbjct:  147 RDLKVENVLLDEESGIYKLCDFGS-ATQEIVHIKNKSDMQIAEDDIQRHTTLQYRAPEIVDLYRSNVINEKIDIWALGCLLYKLLFYTTPFEDS-GSL--GILNANYTIPPTTYSNDLINLIRVMLSPDPASRPNIFEITNQICAL 288          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A7S0CTF3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CTF3_9EUKA)

HSP 1 Score: 126 bits (316), Expect = 2.640e-32
Identity = 70/140 (50.00%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGD--KKKRYSAGLVSLIRCCLVVDPARRPTIGQV 414
            RDLK++NLL+  DG IKLCDFGSC+ + K+Y +  + LQ   + I++ TT  Y +PE  DL++  V+SEKVDIWALG IL+ LAFF+ PF+D KGN+   AI+ G  +  KK +YS  LV  I+  LV  P +RP I +V
Sbjct:  168 RDLKIENLLLTTDGTIKLCDFGSCTIRSKSYTTRSEILQ-EEERIQKYTTNCYMAPEMADLYKHEVISEKVDIWALGCILYVLAFFEHPFQD-KGNL---AIMNGTYEIPKKHKYSELLVDTIKGILVRKPKKRPNIHRV 302          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A7R9YG02_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG02_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.250e-31
Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query:    1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGL-------------GDKKKRYSAGLVSLIRCCLVVDPARRPTIGQV 414
            RD+KV+N+LVG DG  KLCDFGS +T H   ++   ++ +  ++I RNTT AYR+PEQVDL++   +SEKVDIWA+G +LFK+ +F+TP+ED  GNV+   IL G              G     ++  LV  I+  +   P  RP+ GQ+
Sbjct:  148 RDIKVENMLVGYDGTYKLCDFGSATTVHHT-VTDTAKIPLIAEEISRNTTLAYRAPEQVDLYRQDPLSEKVDIWAVGCMLFKMMYFRTPYEDTSGNVEKIGILNGADGLRFPPPVLQRAGFPNPPFTQSLVDFIKISMTQKPTERPSAGQL 297          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A7S1XJ07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ07_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.140e-31
Identity = 56/106 (52.83%), Postives = 81/106 (76.42%), Query Frame = 1
Query:    1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGL 318
            RD+KV+N+L+G  G+ K+CDFGS +T H   ++   ++ +  ++I RNTT AYR+PEQVDL++   VSEKVDIWALG +++KL +F+TPFEDN+GNV+   IL G+
Sbjct:  159 RDIKVENVLLGPGGVFKVCDFGSGTTTHYT-VTDTSKIPLIAEEISRNTTLAYRAPEQVDLYRQQPVSEKVDIWALGCMIYKLCYFRTPFEDNQGNVEKIGILNGI 263          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A8J4Q0U1_9MYCE (Protein kinase domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q0U1_9MYCE)

HSP 1 Score: 126 bits (316), Expect = 7.820e-31
Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 1
Query:    1 RDLKVDNLLVGRD-GLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNK--GNVDAGAILKGLGDKKKRYSAGLVSLIRCCLVVDPARRPTIGQVGNPVAVF 435
            RDLKV+N+L+  + GL KLCDFGS +TQ   +L  K ++Q A DDI R+TT  YR+PE VDL++ +V++EK+DIWALG++L+KL F+ TPFED+   G ++A             YS+ L++LI+  L  DP  RPTI ++ N + + 
Sbjct:  144 RDLKVENVLLEEESGLYKLCDFGS-ATQDITHLKNKVDMQRAEDDISRHTTIQYRAPEIVDLYRCNVITEKIDIWALGILLYKLLFYTTPFEDSGSLGILNANYTFPS----NHPYSSNLINLIKLLLSPDPKDRPTIFELTNQICLL 286          
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A0U9HMR3_KLENI (Protein kinase-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HMR3_KLENI)

HSP 1 Score: 125 bits (315), Expect = 1.010e-30
Identity = 66/145 (45.52%), Postives = 98/145 (67.59%), Query Frame = 1
Query:    1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKG---LGDKKKRYSAGLVSLIRCCLVVDPARRPTIGQVGNPV 426
            RDLK +N+L+  +G  KLCDFGSCST HK +   ++E+    D+IR++TT AYR+PE  DL++  ++SEKVDIWALG +L+++AFF++ F D +  +    IL G   + D  K Y+ GL+SLI+  L  +P +RP +G+V   V
Sbjct:  156 RDLKAENVLLAGEGAWKLCDFGSCSTNHKRF-ETEREMGQEEDNIRKHTTPAYRAPEMWDLYRRELISEKVDIWALGCLLYRMAFFKSAF-DGESKLQ---ILNGNYRIPDSPK-YTPGLISLIKDMLSAEPGKRPDVGRVWRTV 294          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLR2_ECTSI2.360e-8095.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL9_9PHAE2.150e-7087.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQI3_9STRA1.200e-3748.59Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YHI7_9STRA2.940e-3762.86Kinase-like domain-containing protein (Fragment) n... [more]
F0ZZW8_DICPU1.390e-3246.58Protein kinase domain-containing protein n=1 Tax=D... [more]
A0A7S0CTF3_9EUKA2.640e-3250.00Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7R9YG02_9STRA1.250e-3143.05Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XJ07_9STRA6.140e-3152.83Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J4Q0U1_9MYCE7.820e-3145.95Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A0U9HMR3_KLENI1.010e-3045.52Protein kinase-like n=1 Tax=Klebsormidium nitens T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1553contigE-siliculosus-1a_F_contig1553:647..2368 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size438
Model size438
Exons3
Ec32 orthologEc-04_004810.2
Ec32 ortholog descriptionSH3 domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC2.7.11.25
EggNOG OGsCOG0515@1,KOG0192@2759,KOG1989@1,KOG1989@2759
EggNOG free text desc.clathrin-coated pit assembly
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004485,GO:0004672,GO:0004674,GO:0004712,GO:0004713,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009791,GO:0009987,GO:0010154,GO:0010344,GO:0016020,GO:0016301,GO:0016310,GO:0016421,GO:0016740,GO:0016772,GO:0016773,GO:0016874,GO:0016885,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0022414,GO:0023052,GO:0031974,GO:0032501,GO:0032502,GO:0035556,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0061458,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0140096,GO:1901564
KEGG ModuleM00678
KEGG Pathwayko04010,ko04341,map04010,map04341
KEGG koko:K04424,ko:K16799
Preferred nameATMRK1
Seed eggNOG ortholog2880.D8LLR2
Seed ortholog evalue3.2e-69
Seed ortholog score267.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1553.3204.1prot_E-siliculosus-1a_F_contig1553.3204.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1553 647..2368 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928066.0987618-CDS-E-siliculosus-1a_F_contig1553:646..7541622928066.0987618-CDS-E-siliculosus-1a_F_contig1553:646..754Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1553 647..754 -
1696318793.0467782-CDS-E-siliculosus-1a_F_contig1553:646..7541696318793.0467782-CDS-E-siliculosus-1a_F_contig1553:646..754Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1553 647..754 -
1622928066.1160426-CDS-E-siliculosus-1a_F_contig1553:1583..18081622928066.1160426-CDS-E-siliculosus-1a_F_contig1553:1583..1808Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1553 1584..1808 -
1696318793.061307-CDS-E-siliculosus-1a_F_contig1553:1583..18081696318793.061307-CDS-E-siliculosus-1a_F_contig1553:1583..1808Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1553 1584..1808 -
1622928066.1266022-CDS-E-siliculosus-1a_F_contig1553:2263..23681622928066.1266022-CDS-E-siliculosus-1a_F_contig1553:2263..2368Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1553 2264..2368 -
1696318793.0706568-CDS-E-siliculosus-1a_F_contig1553:2263..23681696318793.0706568-CDS-E-siliculosus-1a_F_contig1553:2263..2368Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1553 2264..2368 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1553.3204.1

>prot_E-siliculosus-1a_F_contig1553.3204.1 ID=prot_E-siliculosus-1a_F_contig1553.3204.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3204.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=146bp
RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTT
AAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAG
AILKGLGDKKKRYSAGLVSLIRCCLVVDPARRPTIGQVGNPVAVF*
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mRNA from alignment at E-siliculosus-1a_F_contig1553:647..2368-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1553.3204.1 ID=mRNA_E-siliculosus-1a_F_contig1553.3204.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3204.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1722bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1553:647..2368- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGAGATTTGAAGGTGGACAACCTCCTCGTAGGGCGCGACGGCCTCATCAA GCTCTGCGACTTCGGCAGCTGCAGCACGCAACACAAGGCCTATCTCTCCC CGAAGGTTCGTGGATTGGAGTGTGCCACACATGAGTCGGAGACCGTATGA GGGGGTGGGTGGGTAGAATTGACGGGTGTCATCCACCTTGCCACGGCATT CTCGACGTGCTCTCCTATCTTCATCACTTCTCTGCTCTCGTGGATGTGTG TTGCGTGGTTGCGATTCTCTCCTGAAATTCGTCTGTGAGAGGCTCTCCTT GAGTTTTTTTTCGTACACGTTGAAACGAAAACGCATCTCCGATACGCAAA TTACGCAAATAAGAAAAGAGTCCAGAACTACAACAATTACAGTAACGAAT TCGTAGTGGTATGCAGTGACCTACCACAGCGGTACGTACCCGTGTCTTTA CTGTCCAAGTTCAGTATTGATTCATTTATTTTTTTGTTCTCAAACTCTGT TGCCCATTATATTTCGTGTGTTTGTTCGTTACGCTTGGCCGCAACGCGCC GCGCCGAGAGCAGGAACTCCAGATAGCCAACGACGACATCCGCAGGAACA CGACCGCGGCCTACCGCTCGCCGGAGCAGGTGGACCTGTTCCAGGGGCAC GTCGTCAGCGAGAAGGTCGACATCTGGGCGCTGGGGGTGATCCTGTTCAA GCTGGCGTTCTTCCAGACCCCGTTTGAGGACAACAAGGGGAACGTCGACG CGGGGGCCATTCTCAAGGGACTGGGGGATAAGAAGGTGGGTGGGAGTTGT TCCGGGGCCGCGGGGCCCCTCGTTGCCCGGGGTGGAAAGTGGTTGTGCTG ATGACAGGTGTTTTTTTTTTTTTTTTTTTTTTTTTTCGTGATGACACGTG GTTGTTAGTGCTGTTTTGCGGACTCTTTTGTGTGGTGTTGTTGTTGTNNN NNNNNNNGGGGGCGGGGGGGGCCGCGTTGGGGGGGGGGGAAAGTGGTTGT GCTGATGACAGGTGTTTTTTTTTTTTTTTTGTACTGATTGCCGTGATGAC ACGTGGTTGTTAGTGCTGTTTTGCGGACTCTATTGTGTGGTGTTGTTGTT TTGCCTGTTTCGTGCGGGTCGGTACTGCTGTGTGTGGTGTTGCGGGTTGC ATGGGGGTAGTTGTAAGTGTCGAGGTCACACACTACGCACCGCCTTGGGG GCGCGTCTTGAGTGATCGTCCTCCTCCGTTCCGCGCTTTCGTTTCAAGAC ACCGTCGTGTCCGTTTCAAGATGTCATCTTGTTGCAAGATATTGTTTTGC AGTAATCAAGGTACCGGTTCGTTCGCTTGAAGATATACTGGTTATTTTCA AGATACGGTTCGTTTCGACATGCCGTTTCGCGTGGATATGCCATTCGTTC CAATCCGTTTCCTTTCCTGCTCCGGCTTTCGGGCAACCCAAGTTTACGCC CCACACACACCCAAACGGATGCAGTCCACTCTGTGTTTTGGGCCATCATT TTCGGACGATGTTTGCTATGGCAGAATTGATTATTCCCGACGGTTTCGTT TTTATATTGTTGGCTTGTTACGATTTCCGCCTGCGTTTTCTGTTTATGAC AGATTCCCCAGGAGAAGAGGTATTCCGCCGGGCTGGTGTCGCTCATCCGG TGCTGCCTCGTGGTGGACCCCGCCAGGAGGCCGACGATAGGACAGGTCGG TAACCCTGTCGCCGTTTTTTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1553:647..2368-

>mRNA_E-siliculosus-1a_F_contig1553.3204.1 ID=mRNA_E-siliculosus-1a_F_contig1553.3204.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3204.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=876bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1553:647..2368- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGAGATTTGAAGGTGGACAACCTCCTCGTAGGGCGCGACGGCCTCATCAA
GCTCTGCGACTTCGGCAGCTGCAGCACGCAACACAAGGCCTATCTCTCCC
CGAAGAGAGATTTGAAGGTGGACAACCTCCTCGTAGGGCGCGACGGCCTC
ATCAAGCTCTGCGACTTCGGCAGCTGCAGCACGCAACACAAGGCCTATCT
CTCCCCGAAGCAGGAACTCCAGATAGCCAACGACGACATCCGCAGGAACA
CGACCGCGGCCTACCGCTCGCCGGAGCAGGTGGACCTGTTCCAGGGGCAC
GTCGTCAGCGAGAAGGTCGACATCTGGGCGCTGGGGGTGATCCTGTTCAA
GCTGGCGTTCTTCCAGACCCCGTTTGAGGACAACAAGGGGAACGTCGACG
CGGGGGCCATTCTCAAGGGACTGGGGGATAAGAAGCAGGAACTCCAGATA
GCCAACGACGACATCCGCAGGAACACGACCGCGGCCTACCGCTCGCCGGA
GCAGGTGGACCTGTTCCAGGGGCACGTCGTCAGCGAGAAGGTCGACATCT
GGGCGCTGGGGGTGATCCTGTTCAAGCTGGCGTTCTTCCAGACCCCGTTT
GAGGACAACAAGGGGAACGTCGACGCGGGGGCCATTCTCAAGGGACTGGG
GGATAAGAAGAAGAGGTATTCCGCCGGGCTGGTGTCGCTCATCCGGTGCT
GCCTCGTGGTGGACCCCGCCAGGAGGCCGACGATAGGACAGGTCGGTAAC
CCTGTCGCCGTTTTTTAGAAGAGGTATTCCGCCGGGCTGGTGTCGCTCAT
CCGGTGCTGCCTCGTGGTGGACCCCGCCAGGAGGCCGACGATAGGACAGG
TCGGTAACCCTGTCGCCGTTTTTTAG
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