mRNA_E-siliculosus-1a_F_contig1553.3204.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: D8LLR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR2_ECTSI) HSP 1 Score: 268 bits (684), Expect = 2.360e-80 Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 1
Query: 1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKK----KRYSAGLVSLIRCCLVVDPARRPTIGQV 414
RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPK ELQ+AN+DIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKK KRYSAGLVSLIRCCLVVDPARRPTIGQV
Sbjct: 152 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPK-ELQLANEDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKKIPQEKRYSAGLVSLIRCCLVVDPARRPTIGQV 292
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A6H5JEL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL9_9PHAE) HSP 1 Score: 239 bits (610), Expect = 2.150e-70 Identity = 122/140 (87.14%), Postives = 127/140 (90.71%), Query Frame = 1
Query: 7 LKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKK----KRYSAGLVSLIRCCLVVDPARRPTIGQV 414
+ VDNLLVGRDGLIKLCDFGSCSTQHKA+LS K+ L IA++DI RNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVD ILKGLGDKK RYSAGLVSLIRCCLVVDPARRPTIGQV
Sbjct: 137 MAVDNLLVGRDGLIKLCDFGSCSTQHKAFLSRKEAL-IAHEDILRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDLEGILKGLGDKKIPQEHRYSAGLVSLIRCCLVVDPARRPTIGQV 275
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A835YQI3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI3_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.200e-37 Identity = 69/142 (48.59%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLG----DKKKRYSAGLVSLIRCCLVVDPARRPTIGQV 414
RDL+V+NLLV G ++LC+FGSCS +H+++ + + ++ +A ++IRR T AYR+PEQVDL GH+VSE+VDIWA+GV+L KLAF TPFED++G+V AIL G + YS+GL +L++ C+ P RP+ Q+
Sbjct: 153 RDLRVENLLVDVRGRVRLCNFGSCSLRHRSFAASR-DIALAKEEIRRRTAPAYRAPEQVDLHLGHMVSERVDIWAVGVLLHKLAFGATPFEDSRGDVQNLAILGGFRVDRLPEAHPYSSGLCALLQLCMNPIPQARPSCAQL 293
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A835YHI7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI7_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.940e-37 Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 1
Query: 1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKG 315
RDLKV+NLL+G DG KLCDFGSCS H+A+ + + +A ++IRR TT AYR+PEQVDL GHVVSE+VD+WALGV+LFKLAF TPFED +G+V IL G
Sbjct: 154 RDLKVENLLIGADGRCKLCDFGSCSVTHRAFAGAR-DAALAKEEIRRRTTPAYRAPEQVDLHLGHVVSERVDVWALGVLLFKLAFGATPFEDARGDVQNLGILGG 257
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: F0ZZW8_DICPU (Protein kinase domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZZW8_DICPU) HSP 1 Score: 131 bits (329), Expect = 1.390e-32 Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 1
Query: 1 RDLKVDNLLVGRD-GLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGDKKKRYSAGLVSLIRCCLVVDPARRPTIGQVGNPVAVF 435
RDLKV+N+L+ + G+ KLCDFGS +TQ ++ K ++QIA DDI+R+TT YR+PE VDL++ +V++EK+DIWALG +L+KL F+ TPFED+ G++ G + YS L++LIR L DPA RP I ++ N +
Sbjct: 147 RDLKVENVLLDEESGIYKLCDFGS-ATQEIVHIKNKSDMQIAEDDIQRHTTLQYRAPEIVDLYRSNVINEKIDIWALGCLLYKLLFYTTPFEDS-GSL--GILNANYTIPPTTYSNDLINLIRVMLSPDPASRPNIFEITNQICAL 288
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A7S0CTF3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CTF3_9EUKA) HSP 1 Score: 126 bits (316), Expect = 2.640e-32 Identity = 70/140 (50.00%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGLGD--KKKRYSAGLVSLIRCCLVVDPARRPTIGQV 414
RDLK++NLL+ DG IKLCDFGSC+ + K+Y + + LQ + I++ TT Y +PE DL++ V+SEKVDIWALG IL+ LAFF+ PF+D KGN+ AI+ G + KK +YS LV I+ LV P +RP I +V
Sbjct: 168 RDLKIENLLLTTDGTIKLCDFGSCTIRSKSYTTRSEILQ-EEERIQKYTTNCYMAPEMADLYKHEVISEKVDIWALGCILYVLAFFEHPFQD-KGNL---AIMNGTYEIPKKHKYSELLVDTIKGILVRKPKKRPNIHRV 302
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A7R9YG02_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG02_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.250e-31 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 1
Query: 1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGL-------------GDKKKRYSAGLVSLIRCCLVVDPARRPTIGQV 414
RD+KV+N+LVG DG KLCDFGS +T H ++ ++ + ++I RNTT AYR+PEQVDL++ +SEKVDIWA+G +LFK+ +F+TP+ED GNV+ IL G G ++ LV I+ + P RP+ GQ+
Sbjct: 148 RDIKVENMLVGYDGTYKLCDFGSATTVHHT-VTDTAKIPLIAEEISRNTTLAYRAPEQVDLYRQDPLSEKVDIWAVGCMLFKMMYFRTPYEDTSGNVEKIGILNGADGLRFPPPVLQRAGFPNPPFTQSLVDFIKISMTQKPTERPSAGQL 297
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A7S1XJ07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ07_9STRA) HSP 1 Score: 121 bits (304), Expect = 6.140e-31 Identity = 56/106 (52.83%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKGL 318
RD+KV+N+L+G G+ K+CDFGS +T H ++ ++ + ++I RNTT AYR+PEQVDL++ VSEKVDIWALG +++KL +F+TPFEDN+GNV+ IL G+
Sbjct: 159 RDIKVENVLLGPGGVFKVCDFGSGTTTHYT-VTDTSKIPLIAEEISRNTTLAYRAPEQVDLYRQQPVSEKVDIWALGCMIYKLCYFRTPFEDNQGNVEKIGILNGI 263
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A8J4Q0U1_9MYCE (Protein kinase domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q0U1_9MYCE) HSP 1 Score: 126 bits (316), Expect = 7.820e-31 Identity = 68/148 (45.95%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 1 RDLKVDNLLVGRD-GLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNK--GNVDAGAILKGLGDKKKRYSAGLVSLIRCCLVVDPARRPTIGQVGNPVAVF 435
RDLKV+N+L+ + GL KLCDFGS +TQ +L K ++Q A DDI R+TT YR+PE VDL++ +V++EK+DIWALG++L+KL F+ TPFED+ G ++A YS+ L++LI+ L DP RPTI ++ N + +
Sbjct: 144 RDLKVENVLLEEESGLYKLCDFGS-ATQDITHLKNKVDMQRAEDDISRHTTIQYRAPEIVDLYRCNVITEKIDIWALGILLYKLLFYTTPFEDSGSLGILNANYTFPS----NHPYSSNLINLIKLLLSPDPKDRPTIFELTNQICLL 286
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Match: A0A0U9HMR3_KLENI (Protein kinase-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HMR3_KLENI) HSP 1 Score: 125 bits (315), Expect = 1.010e-30 Identity = 66/145 (45.52%), Postives = 98/145 (67.59%), Query Frame = 1
Query: 1 RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTAAYRSPEQVDLFQGHVVSEKVDIWALGVILFKLAFFQTPFEDNKGNVDAGAILKG---LGDKKKRYSAGLVSLIRCCLVVDPARRPTIGQVGNPV 426
RDLK +N+L+ +G KLCDFGSCST HK + ++E+ D+IR++TT AYR+PE DL++ ++SEKVDIWALG +L+++AFF++ F D + + IL G + D K Y+ GL+SLI+ L +P +RP +G+V V
Sbjct: 156 RDLKAENVLLAGEGAWKLCDFGSCSTNHKRF-ETEREMGQEEDNIRKHTTPAYRAPEMWDLYRRELISEKVDIWALGCLLYRMAFFKSAF-DGESKLQ---ILNGNYRIPDSPK-YTPGLISLIKDMLSAEPGKRPDVGRVWRTV 294 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1553.3204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1553.3204.1 >prot_E-siliculosus-1a_F_contig1553.3204.1 ID=prot_E-siliculosus-1a_F_contig1553.3204.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3204.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=146bp RDLKVDNLLVGRDGLIKLCDFGSCSTQHKAYLSPKQELQIANDDIRRNTTback to top mRNA from alignment at E-siliculosus-1a_F_contig1553:647..2368- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1553.3204.1 ID=mRNA_E-siliculosus-1a_F_contig1553.3204.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3204.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1722bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1553:647..2368- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1553:647..2368- >mRNA_E-siliculosus-1a_F_contig1553.3204.1 ID=mRNA_E-siliculosus-1a_F_contig1553.3204.1|Name=mRNA_E-siliculosus-1a_F_contig1553.3204.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=876bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1553:647..2368- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |