mRNA_E-siliculosus-1a_F_contig1552.3198.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: D7FK21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK21_ECTSI) HSP 1 Score: 358 bits (920), Expect = 7.420e-113 Identity = 187/193 (96.89%), Postives = 189/193 (97.93%), Query Frame = 1
Query: 1 QPEARRNSTFAVSDFPTSWPVPSSGWVDELLKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWIVKQPKT 579
+PEARRNSTFAVSDFPTSWPVPSSGWVDE LKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKY SAKEEREAE XXXXXX KRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWIVKQP+T
Sbjct: 420 KPEARRNSTFAVSDFPTSWPVPSSGWVDEFLKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYLSAKEEREAEEXXXXXXXKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWIVKQPQT 612
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: A0A6H5KAR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAR2_9PHAE) HSP 1 Score: 361 bits (927), Expect = 1.710e-111 Identity = 188/193 (97.41%), Postives = 189/193 (97.93%), Query Frame = 1
Query: 1 QPEARRNSTFAVSDFPTSWPVPSSGWVDELLKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWIVKQPKT 579
QPEARRNSTFAVSDFPTSWPVPSSGWVDE LKLTGPELLRIP+PATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKY SAKEEREAE XXXXXX KRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWIVKQPKT
Sbjct: 634 QPEARRNSTFAVSDFPTSWPVPSSGWVDEFLKLTGPELLRIPIPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYLSAKEEREAEEXXXXXXXKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWIVKQPKT 826
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: L1JPC0_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JPC0_GUITC) HSP 1 Score: 116 bits (291), Expect = 2.700e-26 Identity = 75/187 (40.11%), Postives = 102/187 (54.55%), Query Frame = 1
Query: 1 QPEARRNSTFAVSDFPTSWPVPSSGWVDELLKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWI 561
QP A S + + ++P + W DE L+L GPEL R P L S T WA W + G+GLTT VK+ E A L F P ++ + S KEE+EAE +K SK R + KEGGV+++VED+P+PRVR +R NMG +T++KE SE++IL L+KDV WI
Sbjct: 28 QPSALNASMSIIGEKSANFPTQTE-WDDEFLRLDGPELFREP-------LGSVSATACMDWVKTSWAPRWEKSGSGLTTPVKIV--ETANGVQLVFRPPKSNFVSFKEEKEAEKAR----EKGDMDEKNSKFRQVTDKEGGVEVVVEDKPFPRVRALRCNMGEETVIKETSEKIILSSLRKDVSAWI 200
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: A0A7S0EUV0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EUV0_9CRYP) HSP 1 Score: 114 bits (285), Expect = 3.300e-23 Identity = 74/190 (38.95%), Postives = 103/190 (54.21%), Query Frame = 1
Query: 1 QPEARRNSTFAVSDFPTSWPVPSSGWVDELLKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWIVKQ 570
QP A + + + ++P + W DE L+L GPEL R P+ S + W WA W + G+GLTT VK+ E A L F P ++ + S KEE+EAE +K SK R + KEGGV+++VED+PYPRVR +R NMG T++KE SE++IL L+KDV WI +
Sbjct: 353 QPSALNATMSIIGEKSANFPTQAE-WDDEFLRLDGPELFREPLG------SVSASACIDWV-KASWAPRWEKSGSGLTTPVKIV--ETADGVQLVFRPPKSSFVSFKEEKEAEKAR----EKGDLDEKNSKFRPVTDKEGGVEVVVEDKPYPRVRALRCNMGEDTVIKETSEKIILSSLRKDVSAWIASR 528
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: A0A6V1PHC2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PHC2_HETAK) HSP 1 Score: 105 bits (263), Expect = 3.700e-20 Identity = 74/178 (41.57%), Postives = 103/178 (57.87%), Query Frame = 1
Query: 19 NSTFAVSDFPTSWPVPSSGWVDELLKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQT-KYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDV 549
N+TF+V+ P S P D+ LKL GPE+ R PV G EG AW L EWA W + G+GLTT VK+ + ++ L F PS++ + + KEE+E E K++G + P + K +GG+DI++E PYPR+RV R + GP T+VKEMSE IL +L+KDV
Sbjct: 556 NATFSVASAPGSGPALPGDLDDQFLKLRGPEVWRRPVDT---GGEEGGRVSAAW--LAEWAARWDQPGSGLTTPVKI--TQLSQGVKLEFVPSKSGDFSTFKEEKEQEKA-----KEKGKAVPNKGATS--KDQGGLDILLETIPYPRIRVSRCSYGPGTVVKEMSEDTILKQLQKDV 719
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: A0A7S0MNM1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MNM1_9CRYP) HSP 1 Score: 102 bits (253), Expect = 2.670e-19 Identity = 65/166 (39.16%), Postives = 89/166 (53.61%), Query Frame = 1
Query: 76 WVDELLKLTGPELLR-----IPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTW 558
W DE LKL GPE+ R +P A + L E WA W ++G GLTT V + V L F P Q+ + S KEER+ E + + PP+ L + EGGV+++VE+RP RVRV+R MG +T+VKE SE+++LD L KDV+ W
Sbjct: 326 WDDEFLKLDGPEIWRWPLGPVPAAACRDWLQES------------WAPRWIKKGNGLTTPVSLTVTPLG--VQLVFKPPQSGFVSFKEERDRERARDRGDEPPPGAAPPAGPAGLRQLEGGVEVVVEERPAGRVRVLRCAMGEETVVKETSERILLDSLIKDVQAW 477
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: A0A7S2BWW7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWW7_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.030e-18 Identity = 65/181 (35.91%), Postives = 92/181 (50.83%), Query Frame = 1
Query: 19 NSTFAVSDFPTSWPVPSSGWVDELLKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWI 561
NSTF++++ + + W D LKL GPELLR +PA G+ A ++ EW++ W + G+GLTT V V E GLYF P Y S EE++ + K P +R L EGG++++VE P PR+R R +VKEMSE IL +L+ D+ WI
Sbjct: 90 NSTFSIANDAKAGVTNQAVWDDLFLKLDGPELLRTLLPA-------GTSASAATEWMAEWSKRWEKPGSGLTTPVVVKATGEGG-VGLYFSPKVNDYVSQAEEKKLKEAAEIGGKPGDKPKPMKVSRAGL--EGGIEVLVEAEPSPRIRAKRIAYKEGAVVKEMSESEILRRLEDDLGRWI 260
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: A0A7S2SFK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFK3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 3.060e-17 Identity = 60/166 (36.14%), Postives = 85/166 (51.20%), Query Frame = 1
Query: 76 WVDELLKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEARRAGLYFDPSQTKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWIVKQP 573
W D L+L GPELLR+P+PA + +A +L EWA W G+GLTT V+V + + F P + + SA+EE+E E G S R + +EGGV I+VE P PR+R R + +KEMSE+ IL L++D+ +W P
Sbjct: 9 WDDMFLRLDGPELLRMPLPAA-------ASPENAKVWLGEWAARWKRPGSGLTTPVEVRTTDTG--VSILFAPKTSSFVSAREEKEQET----------GQGKASPKRLRVGQEGGVQILVEAVPTPRIRARRFAYAEEAPLKEMSEKDILRSLQRDLASWTKNMP 155
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: A0A835YK07_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK07_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.800e-16 Identity = 66/182 (36.26%), Postives = 91/182 (50.00%), Query Frame = 1
Query: 16 RNSTFAVSDFPTSWPVPSSGWVDELLKLTGPE-LLRIPVPATFEGLSEGSGTFHAWAFLREWAQLWTEEGTGLTTRVKVFVDEEA----RRAGLYFDPSQTKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKD 546
RN+T ++ + P + W D LK+ GPE LLR+P+ + A F+REWAQLWT G+GLTT V V A R + F P+ + S+KEER AE + +G EGGV +VE PYPR+RVVRA + +KEMSE I+ + ++D
Sbjct: 513 RNATASIVSAAAAAPPTQALWTDLFLKMQGPEQLLRVPLADVMP--KDRVDVTAAAIFMREWAQLWTRAGSGLTTPVTVATSPRAPNGSERVEILFRPTANAFVSSKEERAAERA-----RDKGEGXXXXXXXRRGAHEGGVIFLVEALPYPRIRVVRAPLSDGAALKEMSESAIVSRFQRD 687
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Match: A0A7S1BSH5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSH5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 9.490e-16 Identity = 81/193 (41.97%), Postives = 104/193 (53.89%), Query Frame = 1
Query: 1 QPEARRNSTFAVSDFPTSWPVPS--SGWVDEL-LKLTGPELLRIPVPATFEGLSEGSGTFHAWAFLREWA-QLWTEEGTGLTTRVKVF-VDEEARRAGLYFDPSQ-TKYRSAKEEREAEXXXXXXXKKRGSSGPPSKTRNLLKKEGGVDIIVEDRPYPRVRVVRANMGPKTIVKEMSEQLILDKLKKDVKTWI 561
QP AR N+T + P S+ + G D+L L+L GPELLRI V AT + + T A F+ EWA Q E+ TGLTT+ V D G+ F ++ Y SAKEE+ + GSS K + K+EGGV+I+VED P RVR R NM TIVKEMSE+ IL KL D+K W+
Sbjct: 226 QPHAR-NATLSAVSAPNSFASETITQGQFDDLFLRLDGPELLRIDV-ATQDVDTANLSTLSA--FVGEWAKQFGKEKNTGLTTKATVRRTDRVPFGVGIEFRSTKGNDYASAKEEKARKESEAEG----GSSAFKEKKKE--KREGGVEIVVEDFPSLRVRARRCNMSEDTIVKEMSEETILRKLASDIKIWL 408 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1552.3198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1552.3198.1 >prot_E-siliculosus-1a_F_contig1552.3198.1 ID=prot_E-siliculosus-1a_F_contig1552.3198.1|Name=mRNA_E-siliculosus-1a_F_contig1552.3198.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=194bp QPEARRNSTFAVSDFPTSWPVPSSGWVDELLKLTGPELLRIPVPATFEGLback to top mRNA from alignment at E-siliculosus-1a_F_contig1552:21207..23883+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1552.3198.1 ID=mRNA_E-siliculosus-1a_F_contig1552.3198.1|Name=mRNA_E-siliculosus-1a_F_contig1552.3198.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2677bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1552:21207..23883+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1552:21207..23883+ >mRNA_E-siliculosus-1a_F_contig1552.3198.1 ID=mRNA_E-siliculosus-1a_F_contig1552.3198.1|Name=mRNA_E-siliculosus-1a_F_contig1552.3198.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1164bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1552:21207..23883+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |