mRNA_E-siliculosus-1a_F_contig15519.3195.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: A0A0F9VM77_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9VM77_9ZZZZ) HSP 1 Score: 223 bits (568), Expect = 3.650e-67 Identity = 112/126 (88.89%), Postives = 121/126 (96.03%), Query Frame = 1
Query: 1 MHSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELVERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELNGALEY 378
MHSLLALNVPMWRVTQRLQEQR+HRYPMLKELFRG+LERLNVDD+ELVERLHSV IEEGSPCLGKTLS YDF+ALEITVTALVRNGER RYP+ ET LL++DV+VLLGTPEALEKAER+LNGALEY
Sbjct: 535 MHSLLALNVPMWRVTQRLQEQRMHRYPMLKELFRGNLERLNVDDDELVERLHSVLIEEGSPCLGKTLSCYDFDALEITVTALVRNGERIRYPDRETSLLNKDVLVLLGTPEALEKAERQLNGALEY 660
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: UPI00201F1D7F (cation:proton antiporter n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201F1D7F) HSP 1 Score: 157 bits (397), Expect = 1.660e-42 Identity = 82/117 (70.09%), Postives = 92/117 (78.63%), Query Frame = 1
Query: 1 MHSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELVERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAE 351
MHSLL LNVP+WRVTQRLQEQRI RYPMLKELFR SLERLN + + ERLH+V I+ SPCLGKTL YD + +TVTALVR+ +R RYP ETVL DVVVLLGTP+ALE AE
Sbjct: 535 MHSLLTLNVPLWRVTQRLQEQRIKRYPMLKELFRSSLERLNEEHDGKTERLHAVQIDAKSPCLGKTLGSYDLPSHAVTVTALVRDNQRTRYPAQETVLEAGDVVVLLGTPDALETAE 651
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: A0A1U9R808_9GAMM (Sodium:proton exchanger n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9R808_9GAMM) HSP 1 Score: 153 bits (387), Expect = 4.260e-41 Identity = 81/121 (66.94%), Postives = 93/121 (76.86%), Query Frame = 1
Query: 1 MHSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELVERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELN 363
MHSLL LNVPMWRVTQRLQEQRI RYPMLKELFR S+E L+ + + ERLHSV +E S CLG TL YDF + +TVTALVR+ ERFRYP+ E L DV+VLLGT EALE+AER L+
Sbjct: 535 MHSLLTLNVPMWRVTQRLQEQRIKRYPMLKELFRSSVELLDEESDGKTERLHSVLLEPESACLGSTLGSYDFPSHSVTVTALVRDQERFRYPDTEIKLKAGDVLVLLGTSEALEEAERRLS 655
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: UPI00054AA3B7 (monovalent cation:proton antiporter family protein n=4 Tax=Halomonas TaxID=2745 RepID=UPI00054AA3B7) HSP 1 Score: 147 bits (371), Expect = 7.360e-39 Identity = 77/123 (62.60%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 1 MHSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELVERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELNGA 369
MHSLL LNVPMWRVTQRLQEQRI+RYPMLKELFRGSLERLN + ++ +ERLHS+ ++ S +G+ L +A + VTALVR ER RYP T L DV+VLLGTPEALE+A+ LN A
Sbjct: 535 MHSLLTLNVPMWRVTQRLQEQRINRYPMLKELFRGSLERLNEEHDDRIERLHSLVLDADSRYVGQPLGNCPLQAPRVVVTALVRGQERIRYPEPATTLQPGDVLVLLGTPEALEEADAALNPA 657
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: UPI001F16BCB1 (cation:proton antiporter n=1 Tax=Halomonas zhangzhouensis TaxID=2733481 RepID=UPI001F16BCB1) HSP 1 Score: 132 bits (332), Expect = 1.930e-33 Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 4 HSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELVERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELN 363
HSLLAL VP++RVT+ LQEQR RYPML+ELFRG+L+ + D+ VERLH++ + GSP +G TL Q E E+ VTALVR +R+RYP +T L +EDVVVLLG P+ L +AER L
Sbjct: 538 HSLLALQVPLYRVTRYLQEQRASRYPMLRELFRGTLDAMATPDDADVERLHAIKLSAGSPAVGHTLKQLASEMQEVMVTALVRGQQRYRYPAEDTELQEEDVVVLLGLPDDLRQAERSLT 657
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: A0A6M4FP24_9GAMM (Sodium:proton exchanger n=1 Tax=Halomonas sp. PA5 TaxID=2730357 RepID=A0A6M4FP24_9GAMM) HSP 1 Score: 127 bits (319), Expect = 1.190e-31 Identity = 67/122 (54.92%), Postives = 86/122 (70.49%), Query Frame = 1
Query: 4 HSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELVERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELNGA 369
HSLLAL+VP +++TQ LQEQR RYPMLKELFRG + LN +D E ERLHS+ + EGSP L + L D E ++ VTALVRN R RYP+ T ++ DV+V+LG PE L++ ER L G+
Sbjct: 538 HSLLALSVPQYKITQYLQEQRTSRYPMLKELFRGDHDALNTED-EKAERLHSIVMHEGSPVLEEELGALDLEDDQVMVTALVRNDRRQRYPDKRTRIMAGDVLVMLGAPEDLKRVERRLTGS 658
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: W7Q337_9GAMM (Uncharacterized protein n=2 Tax=Halomonas sp. BC04 TaxID=1403540 RepID=W7Q337_9GAMM) HSP 1 Score: 117 bits (294), Expect = 3.580e-30 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 1
Query: 4 HSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELVERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELNG 366
H+L +L VP++RV Q+LQEQR Y ML+ELFRG+L+ + ++ E E LHSV + EG P +G +LS+ D E +++VTA+VRN ER RYP G T + +DV+VLLG+ + LE+ ER L G
Sbjct: 127 HALQSLGVPLFRVAQQLQEQRSSHYRMLRELFRGTLDSIKPEETEK-ESLHSVILHEGCPAIGHSLSELDTEQDQVSVTAIVRNNERERYPAGSTEVQADDVLVLLGSQDNLERVERRLTG 246
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: UPI0017469166 (monovalent cation:proton antiporter family protein n=2 Tax=Halomonas TaxID=2745 RepID=UPI0017469166) HSP 1 Score: 122 bits (306), Expect = 7.240e-30 Identity = 67/125 (53.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 4 HSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELV---ERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELNGA 369
H+L AL VP++RVT+ LQEQR RY ML+ELFRGSL+ ++ D ERLHSV + EGSP +G+TL+Q D E +++VTALVR +R RYP T ++ +DV+VLLG+ + LEK ER L GA
Sbjct: 535 HALQALGVPLYRVTRHLQEQRTSRYQMLRELFRGSLD--SIQDPRPAGEQERLHSVVLSEGSPAIGQTLAQLDTEQDQVSVTALVREDQRRRYPEKSTQVVADDVLVLLGSQDNLEKVERRLTGA 657
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: A0A101D000_9GAMM (Sodium/hydrogen exchanger n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A101D000_9GAMM) HSP 1 Score: 121 bits (303), Expect = 1.840e-29 Identity = 65/122 (53.28%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 4 HSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERL-NVDDNELVERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELNG 366
H+L AL VP++RVT+ LQEQR Y ML+ELFRGSL+ L N+ ERLH+V + EGSP +G++L+Q D E +++VTA+VR +R RYP G T + +DV+VLLGT + LEK ER L G
Sbjct: 533 HALQALGVPLYRVTRHLQEQRASHYRMLRELFRGSLDSLDNLRPPGETERLHAVVLHEGSPAIGQSLAQLDTEKDQVSVTAMVREEQRNRYPPGNTEVQADDVLVLLGTQDNLEKVERRLTG 654
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Match: UPI001BD2E0F8 (cation:proton antiporter n=1 Tax=Halomonas sp. TRM85114 TaxID=2810616 RepID=UPI001BD2E0F8) HSP 1 Score: 115 bits (287), Expect = 2.790e-27 Identity = 64/124 (51.61%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 4 HSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELV---ERLHSVPIEEGSPCLGKTLSQYDFEALEITVTALVRNGERFRYPNGETVLLDEDVVVLLGTPEALEKAERELNG 366
H+L L VP++RVT+ LQEQR Y ML+ELFRGSL+ N+ D+ ERLHSV + EG P +G+ L+Q E +++VTALVR+G+R RYP +T + +DV+VLLGT + LEK ER L G
Sbjct: 533 HALQTLGVPLYRVTRHLQEQRASHYSMLRELFRGSLD--NIQDHRPEGESERLHSVVLHEGCPAIGQRLAQLYTENDQVSVTALVRDGQRNRYPAEDTEVQADDVLVLLGTQDNLEKVERRLTG 654 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig15519.3195.1 >prot_E-siliculosus-1a_F_contig15519.3195.1 ID=prot_E-siliculosus-1a_F_contig15519.3195.1|Name=mRNA_E-siliculosus-1a_F_contig15519.3195.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=127bp MHSLLALNVPMWRVTQRLQEQRIHRYPMLKELFRGSLERLNVDDNELVERback to top mRNA from alignment at E-siliculosus-1a_F_contig15519:573..953- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig15519.3195.1 ID=mRNA_E-siliculosus-1a_F_contig15519.3195.1|Name=mRNA_E-siliculosus-1a_F_contig15519.3195.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=381bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15519:573..953- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15519:573..953- >mRNA_E-siliculosus-1a_F_contig15519.3195.1 ID=mRNA_E-siliculosus-1a_F_contig15519.3195.1|Name=mRNA_E-siliculosus-1a_F_contig15519.3195.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=762bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15519:573..953- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |