mRNA_E-siliculosus-1a_F_contig15518.3193.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15518.3193.1
Unique NamemRNA_E-siliculosus-1a_F_contig15518.3193.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A2A3XCA5_9GAMM (STN domain-containing protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A2A3XCA5_9GAMM)

HSP 1 Score: 567 bits (1462), Expect = 1.500e-193
Identity = 275/318 (86.48%), Postives = 295/318 (92.77%), Query Frame = 1
Query:    1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            N+FKARFHIDDDQSLTFSYLGTELSYNNVSDRQ+     GEV DGD+AWRRFGDA+T+SDSVSLRYNLNPSSPL+NLEANAYFV+TEG+RYTEAG+PVVQ GT+MT+L WMIGVCE NPV D  Y+ACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQ  + DNTMQP+GERSIASAFGNLQWENE FTLAAGLRYDYYKLKGST+LPG EWTY+DRYARASRYAENQLASRTRNCHNPSPG+SERSIQMACDSLAA+EGYANDPTT PNYET   + P WLS+TVMQDY
Sbjct:  367 NLFKARFHIDDDQSLTFSYLGTELSYNNVSDRQVLR--AGEVVDGDNAWRRFGDANTTSDSVSLRYNLNPSSPLLNLEANAYFVSTEGQRYTEAGRPVVQGGTNMTELAWMIGVCETNPVQDMYYNACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQFGANDNTMQPNGERSIASAFGNLQWENEAFTLAAGLRYDYYKLKGSTKLPGVEWTYYDRYARASRYAENQLASRTRNCHNPSPGSSERSIQMACDSLAAFEGYANDPTTLPNYETHWRYEPTWLSDTVMQDY 682          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A3D4KLN3_HALSX (Uncharacterized protein n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A3D4KLN3_HALSX)

HSP 1 Score: 531 bits (1369), Expect = 1.280e-179
Identity = 261/318 (82.08%), Postives = 281/318 (88.36%), Query Frame = 1
Query:    1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            N+FKARFHIDDDQSLTFSYLGTELSYNNVSDRQI     GEV DGDDAWRRFGDASTSSDSVSLRYNLNPSSPL+NLEANAYFV+TEG+RYTEAG+PVV NGTDMT+LYWMIGVCEQNP+PDNAYSACRAGLDNNNRTQIDTYGFTLENTA F+LGG+DGFSSNHG+EYFIDKGESTTTQERGGRQ  + DNTMQP+GERSIASAFGNLQWE+ETFTLAAGLRYDYYKLKGSTQLPGAEWTY DRYA A RYA+++L S    C   SP  SE   Q ACD +   + Y NDPTTFPNY+TS NFNPMW SETV+ DY
Sbjct:  365 NLFKARFHIDDDQSLTFSYLGTELSYNNVSDRQIMR--AGEVVDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLLNLEANAYFVSTEGQRYTEAGRPVVLNGTDMTELYWMIGVCEQNPIPDNAYSACRAGLDNNNRTQIDTYGFTLENTAHFALGGIDGFSSNHGVEYFIDKGESTTTQERGGRQFGANDNTMQPNGERSIASAFGNLQWEDETFTLAAGLRYDYYKLKGSTQLPGAEWTYNDRYAMALRYAQSRLNSAESKCR--SPYLSEAQRQRACDRIPQEQAYVNDPTTFPNYQTSNNFNPMWQSETVLHDY 678          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: UPI0017889776 (TonB-dependent receptor n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=UPI0017889776)

HSP 1 Score: 514 bits (1323), Expect = 1.040e-172
Identity = 256/318 (80.50%), Postives = 277/318 (87.11%), Query Frame = 1
Query:    1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            N+FKAR HIDDDQSLTFSYLGTELSYNNVSDRQI     GEV DGDDAWRRFGDAST+SDSVSLRYNLNPSSPLINLEANAYFV+TEG+RYTEAG+PVV NGTDMT+L WM+GVCEQNP+PDNAYSACRAGLDNNNRTQIDTYGFTLENTA F+LGG+DGFSSNHG+EYFIDKGESTT QERGGRQLAS DNTMQPSGERSIASAF NLQWENE FTLAAGLRYDYYKLKGST+LPG EWTY +RY RASR AEN L +R  NC   S    E+S Q ACD +  +EGY NDPT+  +YETS  + P WLS+TVMQDY
Sbjct:  367 NLFKARLHIDDDQSLTFSYLGTELSYNNVSDRQIMR--AGEVVDGDDAWRRFGDASTTSDSVSLRYNLNPSSPLINLEANAYFVSTEGQRYTEAGRPVVLNGTDMTELNWMMGVCEQNPIPDNAYSACRAGLDNNNRTQIDTYGFTLENTAHFALGGIDGFSSNHGVEYFIDKGESTTAQERGGRQLASIDNTMQPSGERSIASAFSNLQWENEAFTLAAGLRYDYYKLKGSTKLPGVEWTYHNRYDRASRRAENGLRTRRSNCI--SAIIPEQSRQTACDDIPTWEGYVNDPTSMIDYETSWRYEPTWLSDTVMQDY 680          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A2A4HHN9_9GAMM (Heme transporter n=2 Tax=Halomonas nigrificans TaxID=2042704 RepID=A0A2A4HHN9_9GAMM)

HSP 1 Score: 501 bits (1290), Expect = 1.810e-167
Identity = 246/318 (77.36%), Postives = 272/318 (85.53%), Query Frame = 1
Query:    1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            N+FKARFHIDDDQSLTFSYLGTELSYNNVSDRQ+     GEV DGD+AWRRFGDA+T+SDSVSLRYNLNP SPLINLEANAYFV+TEG RY EAG+PV++ GT+MTDLYWM+G CEQNPV D  Y+ACRAGLDNNNRT+IDTYGFTLENTARFSLGG+DG SSNHGIEYFIDKG+STTTQERGGRQ   + NTMQP+GERSIASAFGNLQWE+ETFTLAAGLRYDYYKLKGSTQLPGAEWTY DRYA A RYA+++L S    C   SP  SE   Q ACD +   + + NDPTTFPNY+T  NFNPMW SETV+ DY
Sbjct:  393 NLFKARFHIDDDQSLTFSYLGTELSYNNVSDRQVLR--AGEVVDGDNAWRRFGDANTTSDSVSLRYNLNPESPLINLEANAYFVSTEGNRYIEAGRPVIEGGTNMTDLYWMMGSCEQNPVQDRHYNACRAGLDNNNRTEIDTYGFTLENTARFSLGGIDGLSSNHGIEYFIDKGKSTTTQERGGRQFGGSLNTMQPNGERSIASAFGNLQWEDETFTLAAGLRYDYYKLKGSTQLPGAEWTYNDRYAMALRYAQSRLNSAESQCR--SPYLSEAQRQRACDRIPQEQAFVNDPTTFPNYQTGNNFNPMWQSETVLHDY 706          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A1G8AJC8_9PSED (Heme acquisition protein HasR n=1 Tax=Pseudomonas flavescens TaxID=29435 RepID=A0A1G8AJC8_9PSED)

HSP 1 Score: 335 bits (859), Expect = 6.180e-104
Identity = 163/317 (51.42%), Postives = 211/317 (66.56%), Query Frame = 1
Query:    4 IFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            +FK R  +  +Q+L F+Y+GTELSYNNVSDR++ N V G   DGD+AW +FGDAS  S S  L Y   P SP I+L A  Y+VTT  ERYT AG+P+V  G DMT+  W +G C QNP+PD+    C AGL N   T+IDTYGF L+NTARF++ G +GFS NHG+EYF+DKG S ++ +  G    S+ NT+ P+G+RSIASAFGNL +E +  TL+AGLRYDYY LKG TQ+PG EWTY  R  R        L +   NC + +   SER+ ++AC+S+ + E    DPT+  N+ TSGN+ P WLS   M DY
Sbjct:  365 LFKGRLKLTPEQALQFTYVGTELSYNNVSDRRVANAVDGSAIDGDEAWAKFGDASARSQSFGLDYTFTPDSPWIDLNAKLYYVTTRNERYTAAGRPIVTGGVDMTETAWRLGFCRQNPIPDSWTQECEAGLGNETHTRIDTYGFKLDNTARFAIAGQEGFSFNHGLEYFLDKGTSKSSSDYQGEAFTSSSNTLNPNGKRSIASAFGNLTYETDAITLSAGLRYDYYHLKGKTQVPGTEWTYQTRLERFISRNTTSLINARNNCADLT--LSERARRVACNSIPSLEAALADPTSVSNFYTSGNYAPQWLSNPGMYDY 679          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A1Q9XVE3_9PSED (STN domain-containing protein n=2 Tax=Pseudomonas sp. PA15(2017) TaxID=1932111 RepID=A0A1Q9XVE3_9PSED)

HSP 1 Score: 326 bits (835), Expect = 9.710e-101
Identity = 162/319 (50.78%), Postives = 216/319 (67.71%), Query Frame = 1
Query:    1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLAST-DNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            ++FK R+H+  +QS+ F+Y+GTE+SYNNVSDR++ NP T +  DGD+AW ++G+A   S S    Y+ NP S LI+L+   Y+V T  +R T AG+PV QNGT+MT+L W IGVC QNPV +   +AC  G  N   T I+TYGFTL+NTARF++ G++GFS NHG+EYF DKGESTTT+ R G  ++ T DN++ P+G+RSIASAFGNL+WENET+TLA GLRYDYY+LKG T+LP ++WTY   Y R      N+LA     C      A  R  Q  C+++  YE Y  DPT+ P YE+   +   W S   + DY
Sbjct:  327 DLFKLRWHLTPEQSMQFTYIGTEISYNNVSDRRVINPSTAQALDGDEAWIKYGNAEARSKSYGFDYSFNPDSDLIDLKVKFYYVDTRNQRETAAGRPVYQNGTNMTELAWQIGVCNQNPVQNTYATACERGYGNEADTSIETYGFTLDNTARFAVAGVEGFSFNHGLEYFQDKGESTTTKVREGADVSRTADNSLNPNGKRSIASAFGNLKWENETYTLAGGLRYDYYQLKGKTRLPISDWTYVSSYDRTLAAYINRLARSIELC-----AAGGRGYQTHCNNVPLYERYVADPTSVPRYESI--YPAQWSSVNTLADY 638          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: UPI001CED62BA (TonB-dependent hemoglobin/transferrin/lactoferrin family receptor n=1 Tax=Pseudomonas sp. MM211 TaxID=2866808 RepID=UPI001CED62BA)

HSP 1 Score: 321 bits (823), Expect = 1.080e-98
Identity = 159/317 (50.16%), Postives = 200/317 (63.09%), Query Frame = 1
Query:    4 IFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            +FK RF +  +QSL F+Y+GT+LSYNNVSDR++T+ V G   DGD AW +FGDAS  S S  L Y   P SP I+L A  Y+VTT  ER T AG+P+V +G DMT   W +G C QNP+P +    C AGL +   T++DTYGF L+NTARF++ G++GF  NHG+EYF+DKG S       G   AS  NT+ P+G+RSIASAFGNL +E E FTL+ GLRYDYY LKG TQ+P  EW Y  R  R +    NQL +    C           IQ  C+S   +E    DPT+  NY TSGN+ P WLS   M+DY
Sbjct:  371 LFKGRFTLTPEQSLQFTYVGTDLSYNNVSDRRVTSAVDGSAIDGDAAWAKFGDASARSQSFGLDYTFTPDSPWIDLNAKLYYVTTRNERNTAAGRPIVTDGVDMTATAWRLGYCRQNPIPADWLQECEAGLGSETNTRVDTYGFKLDNTARFAVAGVEGFHFNHGLEYFLDKGTSKNQSNYQGENFASGQNTLNPNGKRSIASAFGNLTFETEQFTLSGGLRYDYYHLKGKTQVPSTEWAYQSRLERFTTVVTNQLNNARARC--------AAGIQSGCNSAITFEAALADPTSVANYYTSGNYAPRWLSNAGMRDY 679          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: UPI0013F14ED8 (TonB-dependent hemoglobin/transferrin/lactoferrin family receptor n=1 Tax=Pseudomonas dryadis TaxID=2487520 RepID=UPI0013F14ED8)

HSP 1 Score: 319 bits (817), Expect = 8.000e-98
Identity = 160/318 (50.31%), Postives = 217/318 (68.24%), Query Frame = 1
Query:    4 IFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGY-ANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            +FK R  +  +QSL F+Y+GT+LSYNNVSDR++T+ V G V DG++AW +FGDAS  S S  L Y  +P SP I+L+A  Y+VTTE +R T AG+P+V +G +MT+  W +G C QNP+P +   AC AGL N + T+IDTYGFTL+NTARF+LGG++GFS NHG+EY+ DKG S T  +  G  +AS  NT+ P+G+RSIASAFG+L +E E  TL+AGLRYD Y LKG TQLP  +W Y  R        E QL +   NC NP+   S+R+ Q ACD++  ++GY A  P + P Y  +G + P W+S   +++Y
Sbjct:  365 LFKGRLILTPEQSLQFTYVGTDLSYNNVSDRRVTSAVDGSVIDGEEAWAKFGDASARSQSFGLDYTYDPDSPWIDLKAKVYYVTTENQRDTAAGRPIVTDGVNMTETAWRLGYCRQNPIPTSWVEACEAGLGNESETRIDTYGFTLDNTARFALGGVEGFSFNHGLEYYQDKGTSKTRSDYQGETIASAQNTLNPNGKRSIASAFGSLTFETEQVTLSAGLRYDSYWLKGKTQLPVTDWNYRSRAELVQSNIETQLQTYIANCANPN--LSDRNRQRACDAIPTWQGYLAAGPESAPFYN-NGQYAPTWVSSPGLREY 679          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: A0A4Q9QJN8_9PSED (Heme transporter n=1 Tax=Pseudomonas daroniae TaxID=2487519 RepID=A0A4Q9QJN8_9PSED)

HSP 1 Score: 316 bits (810), Expect = 8.040e-97
Identity = 159/317 (50.16%), Postives = 213/317 (67.19%), Query Frame = 1
Query:    4 IFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYETSGNFNPMWLSETVMQDY 954
            +FK R  +  +QSL F+Y+GT+L YNNVSDR++TNPV G  RDG++AW ++GDAS  S S  L Y+ NP SPLI+ +A  Y+VTT+ +R  +AG+P+V +G DMT+  W +G C QNP+P +   AC AGL N   T+IDTYGFTL+NTARF+LGG +GFS NHG+EY+ DKG S T+ +  G  +AS  NT+ P+G+RSIASAFG+L +E E  TL+AGLRYD Y LKG TQLP  +W Y  R    +R     L +  RNC + S   S+R    AC++++ +EGY  DPTT   Y T   +   W S   M++Y
Sbjct:  364 LFKGRLTLTPEQSLQFTYVGTDLGYNNVSDRRVTNPVDGSARDGEEAWIKYGDASARSQSFGLDYSFNPDSPLIDFKAKLYYVTTKNQRDNDAGRPIVTDGVDMTETAWRLGFCRQNPIPASWEPACEAGLGNETETRIDTYGFTLDNTARFTLGGAEGFSFNHGLEYYQDKGTSKTSSDYQGETIASAQNTLNPNGKRSIASAFGSLTFETEQVTLSAGLRYDSYWLKGKTQLPVTDWAYESRSQYYNRQITQSLETSRRNCTDFSLRESQRI--NACNNISRFEGYLADPTTDSRYSTDF-YAGRWSSNPGMREY 677          
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Match: UPI0013D4369C (TonB-dependent receptor n=1 Tax=Halomonas socia TaxID=1081866 RepID=UPI0013D4369C)

HSP 1 Score: 297 bits (760), Expect = 1.450e-92
Identity = 141/252 (55.95%), Postives = 182/252 (72.22%), Query Frame = 1
Query:    1 NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWRRFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQNGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENTARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGERSIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARASRY 756
            N+FKAR ++  DQ+L F+YL T++SYNNVSDR++TNP  G VRDGD+AW+++G+A  +S S+ L Y  NP S  I+LEA  Y V+T+ ERYT  G+PV+ +G +MT+  W  G C+Q P PDN  S C AGL +N  T I TYG  LENTARF+LGG+DGF  NHGIEYF D+G+S T  +R G  +   +NT+QP+G RSIASAFGNL WEN+T+TL  GLRYDYY+LKG T++PG EW Y  R  +   Y
Sbjct:   30 NLFKARLNLTPDQALQFTYLDTDISYNNVSDRRVTNPSDGSVRDGDEAWQQYGNAEAASQSIGLDYTFNPDSNWIDLEARVYRVSTDNERYTREGRPVITDGINMTEEAWRTGRCDQVPFPDNWQSECEAGLGSNAVTNITTYGLALENTARFTLGGVDGFRFNHGIEYFQDRGDSNTEYDRQGTAITMAENTLQPNGRRSIASAFGNLVWENDTWTLGGGLRYDYYRLKGDTRVPGVEWNYSTRQEQFDDY 281          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15518.3193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2A3XCA5_9GAMM1.500e-19386.48STN domain-containing protein n=3 Tax=Halomonas Ta... [more]
A0A3D4KLN3_HALSX1.280e-17982.08Uncharacterized protein n=1 Tax=Halomonas sp. TaxI... [more]
UPI00178897761.040e-17280.50TonB-dependent receptor n=2 Tax=unclassified Halom... [more]
A0A2A4HHN9_9GAMM1.810e-16777.36Heme transporter n=2 Tax=Halomonas nigrificans Tax... [more]
A0A1G8AJC8_9PSED6.180e-10451.42Heme acquisition protein HasR n=1 Tax=Pseudomonas ... [more]
A0A1Q9XVE3_9PSED9.710e-10150.78STN domain-containing protein n=2 Tax=Pseudomonas ... [more]
UPI001CED62BA1.080e-9850.16TonB-dependent hemoglobin/transferrin/lactoferrin ... [more]
UPI0013F14ED88.000e-9850.31TonB-dependent hemoglobin/transferrin/lactoferrin ... [more]
A0A4Q9QJN8_9PSED8.040e-9750.16Heme transporter n=1 Tax=Pseudomonas daroniae TaxI... [more]
UPI0013D4369C1.450e-9255.95TonB-dependent receptor n=1 Tax=Halomonas socia Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15518contigE-siliculosus-1a_F_contig15518:3..956 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size954
Model size954
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelAlcaligenaceae
COG Functional cat.P
EggNOG OGs1QUEJ@1224,2WI7P@28216,3T521@506,COG1629@1,COG4771@2
EggNOG free text desc.TonB dependent receptor
KEGG TC1.B.14.2,1.B.14.7.1
KEGG koko:K16087,ko:K16152
Preferred namehasR
Seed eggNOG ortholog1216976.AX27061_5516
Seed ortholog evalue3.8e-35
Seed ortholog score155.6
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928064.726896-CDS-E-siliculosus-1a_F_contig15518:2..9561622928064.726896-CDS-E-siliculosus-1a_F_contig15518:2..956Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15518 3..956 +
1696318792.5697203-CDS-E-siliculosus-1a_F_contig15518:2..9561696318792.5697203-CDS-E-siliculosus-1a_F_contig15518:2..956Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15518 3..956 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15518.3193.1prot_E-siliculosus-1a_F_contig15518.3193.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15518 3..956 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15518.3193.1

>prot_E-siliculosus-1a_F_contig15518.3193.1 ID=prot_E-siliculosus-1a_F_contig15518.3193.1|Name=mRNA_E-siliculosus-1a_F_contig15518.3193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=318bp
NIFKARFHIDDDQSLTFSYLGTELSYNNVSDRQITNPVTGEVRDGDDAWR
RFGDASTSSDSVSLRYNLNPSSPLINLEANAYFVTTEGERYTEAGQPVVQ
NGTDMTDLYWMIGVCEQNPVPDNAYSACRAGLDNNNRTQIDTYGFTLENT
ARFSLGGMDGFSSNHGIEYFIDKGESTTTQERGGRQLASTDNTMQPSGER
SIASAFGNLQWENETFTLAAGLRYDYYKLKGSTQLPGAEWTYFDRYARAS
RYAENQLASRTRNCHNPSPGASERSIQMACDSLAAYEGYANDPTTFPNYE
TSGNFNPMWLSETVMQDY
back to top

mRNA from alignment at E-siliculosus-1a_F_contig15518:3..956+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15518.3193.1 ID=mRNA_E-siliculosus-1a_F_contig15518.3193.1|Name=mRNA_E-siliculosus-1a_F_contig15518.3193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=954bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15518:3..956+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AACATATTCAAGGCACGTTTTCATATCGATGATGATCAGTCACTGACGTT CTCTTACCTGGGTACTGAACTCTCCTACAACAATGTCTCTGATCGCCAGA TCACAAATCCGGTCACTGGAGAAGTTAGGGATGGCGATGACGCTTGGCGG CGCTTTGGCGATGCCAGCACATCCTCTGACTCAGTTAGCCTGCGCTATAA CCTTAACCCCTCCTCCCCTCTGATTAACCTGGAGGCTAACGCCTACTTCG TAACGACAGAAGGGGAGCGTTATACCGAGGCTGGCCAACCTGTGGTGCAA AACGGCACCGATATGACCGACCTCTACTGGATGATTGGCGTCTGCGAACA AAATCCCGTACCGGATAATGCCTATAGCGCTTGTCGGGCCGGTCTAGACA ACAATAACCGCACTCAAATCGACACCTACGGCTTTACGCTGGAAAACACT GCGCGCTTTTCACTAGGAGGCATGGACGGTTTCTCCTCTAACCACGGTAT TGAGTATTTTATTGATAAGGGCGAGTCCACCACCACACAGGAGCGTGGCG GCCGCCAGTTGGCCTCGACCGACAACACTATGCAGCCCAGCGGCGAGCGC AGTATTGCCAGCGCCTTTGGCAATCTGCAGTGGGAAAATGAGACTTTTAC CCTGGCGGCAGGGCTTCGCTACGACTACTACAAGCTTAAGGGCTCAACCC AACTACCTGGGGCAGAGTGGACTTACTTTGACCGCTATGCCAGGGCTTCG CGGTACGCAGAGAATCAGTTGGCAAGTCGAACCAGAAATTGTCATAACCC CTCCCCCGGTGCAAGTGAGCGCTCGATACAGATGGCTTGCGATAGCCTTG CTGCTTATGAAGGCTACGCCAACGACCCAACCACTTTCCCCAACTATGAG ACAAGCGGCAATTTCAATCCGATGTGGCTCTCGGAAACCGTGATGCAAGA TTAT
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15518:3..956+

>mRNA_E-siliculosus-1a_F_contig15518.3193.1 ID=mRNA_E-siliculosus-1a_F_contig15518.3193.1|Name=mRNA_E-siliculosus-1a_F_contig15518.3193.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1908bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15518:3..956+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AACATATTCAAGGCACGTTTTCATATCGATGATGATCAGTCACTGACGTT
CTCTTACCTGGGTACTGAACTCTCCTACAACAATGTCTCTGATCGCCAGA
TCACAAATCCGGTCACTGGAGAAGTTAGGGATGGCGATGACGCTTGGCGG
CGCTTTGGCGATGCCAGCACATCCTCTGACTCAGTTAGCCTGCGCTATAA
CCTTAACCCCTCCTCCCCTCTGATTAACCTGGAGGCTAACGCCTACTTCG
TAACGACAGAAGGGGAGCGTTATACCGAGGCTGGCCAACCTGTGGTGCAA
AACGGCACCGATATGACCGACCTCTACTGGATGATTGGCGTCTGCGAACA
AAATCCCGTACCGGATAATGCCTATAGCGCTTGTCGGGCCGGTCTAGACA
ACAATAACCGCACTCAAATCGACACCTACGGCTTTACGCTGGAAAACACT
GCGCGCTTTTCACTAGGAGGCATGGACGGTTTCTCCTCTAACCACGGTAT
TGAGTATTTTATTGATAAGGGCGAGTCCACCACCACACAGGAGCGTGGCG
GCCGCCAGTTGGCCTCGACCGACAACACTATGCAGCCCAGCGGCGAGCGC
AGTATTGCCAGCGCCTTTGGCAATCTGCAGTGGGAAAATGAGACTTTTAC
CCTGGCGGCAGGGCTTCGCTACGACTACTACAAGCTTAAGGGCTCAACCC
AACTACCTGGGGCAGAGTGGACTTACTTTGACCGCTATGCCAGGGCTTCG
CGGTACGCAGAGAATCAGTTGGCAAGTCGAACCAGAAATTGTCATAACCC
CTCCCCCGGTGCAAGTGAGCGCTCGATACAGATGGCTTGCGATAGCCTTG
CTGCTTATGAAGGCTACGCCAACGACCCAACCACTTTCCCCAACTATGAG
ACAAGCGGCAATTTCAATCCGATGTGGCTCTCGGAAACCGTGATGCAAGA
TTATAACATATTCAAGGCACGTTTTCATATCGATGATGATCAGTCACTGA
CGTTCTCTTACCTGGGTACTGAACTCTCCTACAACAATGTCTCTGATCGC
CAGATCACAAATCCGGTCACTGGAGAAGTTAGGGATGGCGATGACGCTTG
GCGGCGCTTTGGCGATGCCAGCACATCCTCTGACTCAGTTAGCCTGCGCT
ATAACCTTAACCCCTCCTCCCCTCTGATTAACCTGGAGGCTAACGCCTAC
TTCGTAACGACAGAAGGGGAGCGTTATACCGAGGCTGGCCAACCTGTGGT
GCAAAACGGCACCGATATGACCGACCTCTACTGGATGATTGGCGTCTGCG
AACAAAATCCCGTACCGGATAATGCCTATAGCGCTTGTCGGGCCGGTCTA
GACAACAATAACCGCACTCAAATCGACACCTACGGCTTTACGCTGGAAAA
CACTGCGCGCTTTTCACTAGGAGGCATGGACGGTTTCTCCTCTAACCACG
GTATTGAGTATTTTATTGATAAGGGCGAGTCCACCACCACACAGGAGCGT
GGCGGCCGCCAGTTGGCCTCGACCGACAACACTATGCAGCCCAGCGGCGA
GCGCAGTATTGCCAGCGCCTTTGGCAATCTGCAGTGGGAAAATGAGACTT
TTACCCTGGCGGCAGGGCTTCGCTACGACTACTACAAGCTTAAGGGCTCA
ACCCAACTACCTGGGGCAGAGTGGACTTACTTTGACCGCTATGCCAGGGC
TTCGCGGTACGCAGAGAATCAGTTGGCAAGTCGAACCAGAAATTGTCATA
ACCCCTCCCCCGGTGCAAGTGAGCGCTCGATACAGATGGCTTGCGATAGC
CTTGCTGCTTATGAAGGCTACGCCAACGACCCAACCACTTTCCCCAACTA
TGAGACAAGCGGCAATTTCAATCCGATGTGGCTCTCGGAAACCGTGATGC
AAGATTAT
back to top