mRNA_E-siliculosus-1a_F_contig1550.3184.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: D7FWX1_ECTSI (RNA-binding protein SiahBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWX1_ECTSI) HSP 1 Score: 906 bits (2341), Expect = 0.000e+0 Identity = 637/696 (91.52%), Postives = 639/696 (91.81%), Query Frame = 2
Query: 59 MSDPMDVTTGSVAPDAAE-SSXXXXXXXXXXXXXXXXXXXXXXXXXVKPTGDAAGHSDGNDNVAVAPAKENPSTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEDPMEGTNEDVEAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRRGGWDTPAAPGAVVKKGWGDAPPVAPXXXXXXLQELQRKLAEEQVAAAMGQAPPVTSVSAGAAALGLTMGAAMQAPGAGTRAQTAPAQPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQGSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNRGAANNGSNGGAGVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 2143
MSDPMDVTTGSVAPDA E S+ XXXXXXXXXXXXXXXXXXXXXX A+AP KENPSTE XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX KEDPMEGTNEDVEAMA XXXXXXXXXXXXXXXXXXXXXXXXXXX TRRGGWDTPAAPGAVVKKGWGDAPPVAPXXXXXXLQELQRKLAEEQVAAAMGQAPPVTSVSAGAAALGLTMGAAMQAPGAGTR QTAPAQPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRP NTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQGSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGN G ANNGSNGG GVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS
Sbjct: 1 MSDPMDVTTGSVAPDAVEISAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIAPTKENPSTEEPSGGDADAAPXXXXXXXXXXXXXXXXXXXXXXPTXXXXXXXXXXXXXXXXXXXXXXXDAKGGGAKEDPMEGTNEDVEAMAAAAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKRTRRGGWDTPAAPGAVVKKGWGDAPPVAPXXXXXXLQELQRKLAEEQVAAAMGQAPPVTSVSAGAAALGLTMGAAMQAPGAGTRTQTAPAQPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPLNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQGSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNGGVANNGSNGGVGVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 696
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: A0A836CC18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC18_9STRA) HSP 1 Score: 226 bits (575), Expect = 7.760e-61 Identity = 166/418 (39.71%), Postives = 215/418 (51.44%), Query Frame = 2
Query: 917 RIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQ---GSGVAAEQLKAAMGMTTAPA----------QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSK---PALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNRGAANNGSNGGAGVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMF 2122
RIY+GSL+YEL+ESDI +IF FG ++ VDMS D +TG+HKGFCFIEY++ SA+AAL +MNGFELAGR IKVGRP+ + G A M +PGM G GV+ A T PA QTK++VGNV+ I + IK +F PFG V+ E+V DP NPG H+G+GFIQ+ E +A + + M FELAGR LRV+WA Q K PA + P + AA AA XXXXXXXXXXXXX T + SRC+ L N++ E+ D D K E+LEE G V L + Q G+ G VRVFV++++ + AI K++ R+F G V+A YD F
Sbjct: 120 RIYIGSLYYELQESDILAIFGAFGQIRAVDMSKDPATGKHKGFCFIEYMEPASAEAALNSMNGFELAGRPIKVGRPNTGSTATPG--------AGMAMPGMTXXXXXXXXXXXXXXXXXXGMGVSPSIEAALQAALTPPAPQQPQVQLVGQTKLFVGNVDLSIPADAIKQIFSPFGQVLTCELVADPENPGKHRGYGFIQFTSEPIASSAMQAMEGFELAGRPLRVSWATSQPKSTAPAGTGQPIDIQAALAAALGQAAPAVAAXXXXXXXXXXXXX--------------------------------------------TAMKPPSRCVLLRNLVSAEEVGDPDLKDEVLEEAARYGQVESLEIIAQSGTVGET-GVRVFVLYANEVQARAAIAKLNKRYFGGNVVKATLYDVDAF 484
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: A0A0U9HK97_KLENI (Putative RNA recognition motif containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HK97_KLENI) HSP 1 Score: 174 bits (441), Expect = 6.610e-43 Identity = 155/460 (33.70%), Postives = 219/460 (47.61%), Query Frame = 2
Query: 869 AGTRAQTAPAQPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQGSG--------VAAEQLKA-------AMGMTTAP-------------AQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQS---------KPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNRGAANNGSNGGAGVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGS---DGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQ 2128
A +A A A P + RIYVGS++YEL ESDI F+ FG++ +DM D++T +HKGFCFIE+ ++A+ AL MN F LAGR +KVGRPHN +G+ GGI P Q AAF + A AQ S + A+Q +A A G+ P +IYVG++ I+ E IK VF+ FG V ++ +P G HKG+GFI++ Q A+ ID+M+ F+L GR L+V WA + P L +P G+ A XXXXXXXXXXXX GL +RC+ L NM+GPE+ D D + E+ EE G V ++ +++++ S D V++FV+F +E A R + R+F GRQ++A YD F +
Sbjct: 73 AAAKATAAQAPPKDACRIYVGSIYYELNESDIILAFSAFGSIHKIDMPRDAATAKHKGFCFIEFHSSEAAENALNTMNEFVLAGRKLKVGRPHNI-AGMPGGIVVSTTPPTPQA--QAAFKQAQQQAQAISAQLSLRQQQQXXLLIAQQQQALENPHLVAQGLLPPPNPAAIQALLNPSRPDARIYVGSIYYEISEEDIKAVFQAFGQVKSCNLIPNPET-GKHKGYGFIEFEQPEAAKAAIDSMNGFDLGGRQLKVGWAAANAGLPTPPPLPNPNLPNMPFGMPPMPAVLPPVTFSPNPFQPXXXXXXXXXXXXXXXXX--XXGLK------------------------------------PTRCVLLKNMVGPEEVD-ADLEGEVTEECSKHGEVERVVIYQEQASARKDDI--QVKIFVLFRTVSEAQRAHRSLDKRWFGGRQIEANFYDEARFKR 487
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: A0A7S3GHK6_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GHK6_9EUKA) HSP 1 Score: 173 bits (439), Expect = 1.810e-42 Identity = 143/476 (30.04%), Postives = 215/476 (45.17%), Query Frame = 2
Query: 797 PVTSVSAGAAALGLTMGAAMQAPG-------AGTRAQTAPAQPSNP-----RRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQGSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPAL------------SVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASR---LQGLGNRGAANNGSNGGAGVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVH-KQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLD 2140
P + A +L L G A+ A G AGT A TA +P RR+YVGS+H+ L E+DI + F G + +M D +T RHKG+CF+EY V+ AD A++ M+GFELAGR I+VGRPH+ I +A AA MA + +Q+ A +T + +++YVGN+ +I ++ VF FG +V +++ + G HKG+GFI++ + A I TM+ FELAGR+LRV++ PA L AGA + A R +Q L G G+GG +++C+ + NMLG + D+D + E+ +E G V ++ VH +Q G + +VFV+F P TAI + GRFF GR+++A + +F +G D
Sbjct: 94 PASVAPTSATSLPLPTGTAIPAAGQGSALPVAGTAASTALGLTVDPATRPRRRVYVGSIHFALTEADIRACFETLGKIVSTEMPKDPATMRHKGYCFVEYSTVEEADTAIKTMSGFELAGRPIRVGRPHDAT------INDSAPVSAAAEAAKAAAMAIN---------------QQISPAKPITNS---SRVYVGNIFWNIGEPELRAVFATFGEIVSVQLIPNHET-GKHKGYGFIEFTSAASAEEAIKTMNGFELAGRSLRVSYPTGGGAPATVGGGGAMNAMGGQAGQQNLGLAGAIAAAAVFKAQQAMSDTAQSLQDEEDMEIKADQRYALMQKL-----------------------RAGAGLGGD-----MAKCIAISNMLGSLNDIDDDLQMEVKQECSKFGEVEEVRVHHRQDPVKGFIG--KVFVLFKTPQGANTAIPALTGRFFDGRRIEAQLFSEALFKKGQFD 514
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: A0A7S2AH99_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AH99_9STRA) HSP 1 Score: 172 bits (437), Expect = 4.300e-42 Identity = 145/455 (31.87%), Postives = 201/455 (44.18%), Query Frame = 2
Query: 917 RIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTD-SGVAGGIEGMGL-------PAAMQLPGMAAFMAQHST--SAAGGAQGSGVAAEQL-KAAMGMTTAPA----------QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWA--------QDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNRGAANNGSNGGAGVVGGSAGRMQGGGVGGATGVPGVS---------------------RCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQG 2131
RIYVGSLHY+L E DI +F FG + V MS++ +TG+ KG+CFIEY + SA+ AL+AMNGFELAGR IKVG+P +G+ G + PA + A + H+ +A G AQ + A + KA+ G TA A + +IYVGN+ I E ++TVFEPFG + +++ DP+ H+G+GFIQY A + M+ FEL GR L+V WA Q Q + +VL P + A + T A +L L R A N + P VS RC+ L NM+ E+A D + EI EE G V + VH V +F+++ + A +H R+F GR + A YDHG F G
Sbjct: 112 RIYVGSLHYDLAEHDIRGVFEAFGKITEVTMSYEPATGKSKGYCFIEYENPNSANQALQAMNGFELAGRQIKVGKPDGAPGAGMMGASGSLSFATPTNSGPAIQAVDRNTAMLQAHALVQAALGKAQPATNALTLMDKASTGTDTAAAGVVANQSSDTRNRIYVGNISTDIGPEALQTVFEPFGRITDVQILPDPAGVAKHRGYGFIQYETNRAAIEAVSQMNDFELLGRRLKVNWANSATTTLNQSQVSASTAVLTPQMLA---------------------------FQQSTVAQQLAAL--RTATGN-------TXXXXXXXXXXPSLPDQDSSPAVSXXXXXXXXXXXXXXXXDQQLPRCVLLKNMVSEEEAADSELAGEIEEEGTKYGKVESVKVHMAEKQ-----GVLIFLLYEAASSAARAQSTLHRRYFGGRIISAELYDHGKFIAG 525
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: A0A7S4PQL3_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PQL3_GUITH) HSP 1 Score: 166 bits (421), Expect = 2.770e-40 Identity = 139/448 (31.03%), Postives = 206/448 (45.98%), Query Frame = 2
Query: 899 QPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSG-----------------------VAG-GIEGMGLPAAMQLPGMAA-FMAQHSTSAAGGAQGSGVAAEQLKAA-MGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQD------QSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQG------LGNRGAANNGSNGGAGVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADD--EDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMF 2122
+P R+YVGSLH++LKE+D+ +IF FG +K ++MS++ +TG+ KG+ FIEY++ ADA +AM+GF +AGR IKVGRPHNT S AG G+ G+ LP +PG+A + Q ++ AQ + +AA++ +A + A +IY+G+V + +K +F+ FG + M+ +P N G HKG+GFI+Y + A I M+ F+LAGR L+V WA Q+ P + AA A L+ +S LQ L NR SR + L NM+ PED D E AE +FG VL + + +Q GS V+VFV F D A+ ++ R+F G+ V A+ Y+ F
Sbjct: 81 KPPQRNRLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKVGRPHNTVSANAPVTILPPQLLVSRPPAMAPLAAAGLGVPGL-LPGMAGIPGLAGQHLLQQRAASLLAAQQAALAAQKAQAQPLNTPVAGPPARIYIGSVLFDVKESEVKQIFQVFGSIKQISMIPNPEN-GKHKGYGFIEYEKHDDAVQAIQAMNGFQLAGRPLKVGWASSAMPDSAQTSSEDKTSNPIIVAAANAIADKVTTSLVTSSSNDITTVEDEE-NLSVSSVLQRKEIMCKLANR----------------------------------PSRVVLLKNMVEPEDVDPLLEQEIAEECSKFGKVNKVLIVTMVEQ-GSR----LVKVFVEFGDQEAATKAVARLDKRWFGGKIVNASTYEEERF 486
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: K3XBN5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBN5_GLOUD) HSP 1 Score: 162 bits (410), Expect = 5.050e-39 Identity = 118/399 (29.57%), Postives = 179/399 (44.86%), Query Frame = 2
Query: 914 RRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQGSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQ-DPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNRGAANNGSNGGAGVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAY 2107
RR+Y+G+L+YELKE DI F+ FGA+K +D+S + GR KGFCF+EY DV +A++A++ +NG +LA R I+VGRPH + G +G A +P +YVGNV + ++++F PFG+V MV P PG H+G+GF+++ ++S A + I M+ FELAG+ L+V K +L+ +P L+ ++ ++ A G + A G RC+CL+N++G + D+E + E+ E G G V + V + VRVFV+F D A + +HGRFF G QVQA Y
Sbjct: 140 RRLYIGNLYYELKEEDIRHTFSPFGAIKSIDLSLEPGHGRSKGFCFLEYDDVLAAESAVQLLNGTQLANRMIRVGRPHRGSANP--GDTSIGQQAIKDVP--------------------------------------TNCVYVGNVRVELNAHHLESIFSPFGIVRSCVMVSVSPLEPGVHRGYGFLEFTEDSAALSAIQHMNGFELAGQNLKV------GKASLAAIP--LNMLTSSDKVVRDANGDLTSASGLSSSMQMPKKIAAFDEEGVEGVKDVAEPGKE---------------------------KRCLCLLNLVGKGEVDEE-LEDEVRGECGRFGAVNSVDVQELDDH------VRVFVLFHDEESASKAKQALHGRFFGGNQVQANYY 456
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: L8GZG0_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZG0_ACACA) HSP 1 Score: 166 bits (420), Expect = 5.860e-39 Identity = 162/455 (35.60%), Postives = 241/455 (52.97%), Query Frame = 2
Query: 884 QTAPAQPSNPR---RIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSGVAGG-------IEGMG--------LPA---AMQLPGMAAFMAQHSTSAAG-GAQGSGVAAEQLKAAMGMTTAPA--QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSK----PALSVLPP---------GLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNRGAANNGSNGGAGVVGGSAGR---MQGGGVGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSD--GAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMF 2122
+ A + PSN + RIYVGSL++EL E DI + F+ FG +K V ++ D T R KGF F+EY +A AAL+ MNGF LAGR +KVGRPH +G+ G + G+ LP ++ L AA AQ + +AA G+Q + ++ G T A A +IYVG++ +T++ IKTVFE FG V ++ +P G HKG+GF++Y + A I M+ ++L GR ++V A + P +L P G G + XXXXXXXXXXXXXXXX +A++ Q + N+ + S+ + R MQ G TG SRC+ L +M GPED DDE + EI +E G V ++ ++++R S+ G V +++F++F ++ A+ ++GR+F GRQ++AA YD F
Sbjct: 238 KAAASAPSNQQLACRIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKHMNGFMLAGRQLKVGRPHTPGAGLPGXXXXXXVMMPGLSPFPQLNPSLPVMNPSILLQANAAIEAQKAAAAAANGSQPTPEMMQEFTKLTGKTAADATASNRIYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPET-GKHKGYGFVEYEESKSAEEAIQQMNGWDLGGRPIKVGRAISSAPILPTPGAGLLNPSGLPSPMLGGFPMPGMSGMPGLLPGMXXXXXXXXXXXXXXXXLSSASAIAQAIANKKVEESLSHEENLTLSTPNQRYALMQKLARGTITGGK-SSRCVVLKDMAGPEDVDDE-LEGEITDEATKYGIVERVVIYQERQSEKPGDV-IIKIFILFQSADQAQKALTSLNGRWFGGRQIKAAFYDEKKF 688
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: A0A5D6XHU0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHU0_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.400e-37 Identity = 132/410 (32.20%), Postives = 187/410 (45.61%), Query Frame = 2
Query: 914 RRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAGGAQGSGVAAEQLKAAMGMTTAPAQTK-IYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQ-DPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNRGAANNGSNGGAGVVGGSAGRMQGGG-------VGGATGV--PG-VSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAY 2107
RR+Y+G+L+Y+LKE DI + FA FG +K +D+S + R KGFCF+E+ DV +A+ A++ +NG +LA R I+VGRPH S G +G A LP TK IYVGNV + + ++++F PFG++ M P H+G+GF+++ +ES A+ I M+ FELAG+ LRV A SAA A T++ R+ G NG +G SAG G V G V PG RC+CL+N++G + DDE + E+ EE G G V + +H+ VRVFV+F D + A + +HGRFF G QVQA Y
Sbjct: 368 RRLYIGNLYYDLKEDDIRNTFAPFGQIKSIDLSLEPGHNRSKGFCFLEFEDVLAAETAVQLLNGSQLANRTIRVGRPHRGSSNP--GDTSIGQQAIKDLP---------------------------------------TKCIYVGNVRVELNSHHLESIFSPFGVIRTCVMAALAPLESNAHRGYGFLEFTEESAAQNAIQHMNGFELAGQNLRVGKA---------------SAAAIAINLA-----------------------TSSDRVV---------RGENG---ELGASAGLAPKKGRAFDDDDVEGVKDVAEPGREKRCLCLLNLVGNGEVDDE-LEGEVREECGRFGAVETVAIHEMEAH------VRVFVLFEDEPSALKAKQALHGRFFGGNQVQAHFY 679
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Match: L1JR44_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JR44_GUITC) HSP 1 Score: 154 bits (390), Expect = 1.610e-36 Identity = 131/426 (30.75%), Postives = 191/426 (44.84%), Query Frame = 2
Query: 899 QPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPHNTDSGVAG---------GIEGMGL-PAAMQLPGMAAFMAQHSTSAAGGAQGSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQG------LGNRGAANNGSNGGAGVVGGSAGRMQGGGVGGATGVPGVSRCMCLVNMLGPEDADD--EDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMF 2122
+P R+YVGSLH++LKE+D+ +IF FG +K ++MS++ +TG+ KG+ FIEY++ ADA +AM+GF +AGR IKVGRPHNT S A + L P LP AA AQ + A+ L + A +IY+G+V + +K +F+ FG + M+ +P N G HKG+GFI+Y + A I M+ F+LAGR L+ +D++ + V A A L+ +S LQ L NR SR + L NM+ PED D E AE +FG VL + + +Q GS V+VFV F D A+ ++ R+F G+ V A+ Y+ F
Sbjct: 93 KPPQRNRLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKVGRPHNTVSANAPVHRRLFFLLNFSSVDLQPWPPSLPQQAALAAQKAQ------------AQPLNTPV----AGPPARIYIGSVLFDVKESEVKQIFQVFGSIKQISMIPNPEN-GKHKGYGFIEYEKHDDAVQAIQAMNGFQLAGRPLK----EDKTSNPIIV-------AAANAIADKVTTSLVTSSSNDITTVEDEENLSVSSVLQRKEIMCKLANR----------------------------------PSRVVLLKNMVEPEDVDPLLEQEIAEECSKFGKVNKVLIVTMVEQ-GSR----LVKVFVEFGDQEAATKAVARLDKRWFGGKIVNASTYEEERF 451 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1550.3184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1550.3184.1 >prot_E-siliculosus-1a_F_contig1550.3184.1 ID=prot_E-siliculosus-1a_F_contig1550.3184.1|Name=mRNA_E-siliculosus-1a_F_contig1550.3184.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=696bp MSDPMDVTTGSVAPDAAESSAASAADPAPANNNGSTKDDAAAAAAVKPTGback to top mRNA from alignment at E-siliculosus-1a_F_contig1550:1720..15324- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1550.3184.1 ID=mRNA_E-siliculosus-1a_F_contig1550.3184.1|Name=mRNA_E-siliculosus-1a_F_contig1550.3184.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=13605bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1550:1720..15324- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1550:1720..15324- >mRNA_E-siliculosus-1a_F_contig1550.3184.1 ID=mRNA_E-siliculosus-1a_F_contig1550.3184.1|Name=mRNA_E-siliculosus-1a_F_contig1550.3184.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4176bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1550:1720..15324- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |