mRNA_E-siliculosus-1a_F_contig155.3183.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: A0A7S1NPW1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NPW1_9EUGL) HSP 1 Score: 174 bits (441), Expect = 3.330e-51 Identity = 76/105 (72.38%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 262 KAPRPKRNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYR-DQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWIK 573
+ P PKRN GELVFPD+P+FRPNL+PK+VL+MGSFGGTYFR IKS VTGKTY DQWKEFPADWFEGL++ ++ S TY VNTY V+CGGDL+MWESSGWI
Sbjct: 60 RMPIPKRNANGELVFPDYPEFRPNLTPKEVLQMGSFGGTYFRSIKSGVTGKTYAADQWKEFPADWFEGLNINAKITSQTYREQVNTYKVNCGGDLYMWESSGWIN 164
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: D8LR27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR27_ECTSI) HSP 1 Score: 164 bits (416), Expect = 6.290e-49 Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 1
Query: 358 MGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWIK 573
MGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLN+VNTYGVHCGGDLHMWESSGWIK
Sbjct: 1 MGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNAVNTYGVHCGGDLHMWESSGWIK 72
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: W5NBZ2_LEPOC (Uncharacterized LOC102683593 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5NBZ2_LEPOC) HSP 1 Score: 159 bits (402), Expect = 1.610e-46 Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 1
Query: 241 EGTSASGKAPRPKRNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWI 570
E S A P++N +G+LVF DFP F PN++PK+VL+ GSFGGTYFRPI SS+T ++Y+D WKE P DW EGLD+ +QVASPTY +VNTY V CGG L MWESSGWI
Sbjct: 40 EARGCSSNALLPEKNNKGQLVFKDFPTFGPNMTPKEVLQAGSFGGTYFRPIYSSITKQSYKDVWKELPVDWLEGLDIPKQVASPTYRENVNTYKVKCGGSLEMWESSGWI 149
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: UPI001E1DF070 (uncharacterized protein LOC123552860 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF070) HSP 1 Score: 162 bits (409), Expect = 3.830e-46 Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 1
Query: 268 PRPKRNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWI 570
P PKRN +G+LVFPD P+ RPN++PK+VL+ GSFGGTYFRPIKSSVTGK+Y WKE P DW EGL++ +QV+S TY VNTYGV CGG L MWE SGWI
Sbjct: 81 PLPKRNAKGQLVFPDHPELRPNMTPKEVLQAGSFGGTYFRPIKSSVTGKSYTQVWKELPKDWLEGLNIGKQVSSSTYDEKVNTYGVKCGGSLEMWEESGWI 181
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: A0A7M7T340_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7T340_STRPU) HSP 1 Score: 161 bits (407), Expect = 6.680e-46 Identity = 71/101 (70.30%), Postives = 80/101 (79.21%), Query Frame = 1
Query: 268 PRPKRNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWI 570
P PKRN +GELVF D+P+ RPN+SPK+VL+ GSFGGTYFRPIKSSVTG+ Y WKE P +W EGLD+ RQVAS YL VNTY V CGG L MWESSGWI
Sbjct: 81 PLPKRNAKGELVFSDYPEMRPNMSPKEVLQAGSFGGTYFRPIKSSVTGEKYSGVWKELPKNWLEGLDIPRQVASSPYLAEVNTYKVKCGGSLEMWESSGWI 181
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: A0A6P8ISI2_ACTTE (uncharacterized protein LOC116304540 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ISI2_ACTTE) HSP 1 Score: 160 bits (405), Expect = 8.830e-46 Identity = 66/98 (67.35%), Postives = 83/98 (84.69%), Query Frame = 1
Query: 277 KRNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWI 570
KR++ G+LVFPD+P+F+PNL+PK+VL+ GSFGGTY+RPIKSSVTG+ Y +WKEFP+DWF+GL + +QV+S TY VNTY V CGG L MWESSGWI
Sbjct: 67 KRDKHGKLVFPDYPEFKPNLTPKEVLQAGSFGGTYYRPIKSSVTGEKYSGEWKEFPSDWFDGLSINKQVSSSTYHIDVNTYNVKCGGSLEMWESSGWI 164
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: A0A2G8KVN9_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KVN9_STIJA) HSP 1 Score: 160 bits (404), Expect = 1.320e-45 Identity = 70/103 (67.96%), Postives = 79/103 (76.70%), Query Frame = 1
Query: 265 APRPKRNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWIK 573
AP PKRN +GELVFPD P+ PNL+P++VL+ GSFGGTYFRPIKS VTG+ Y WKE P DW EGL + +QVAS TY VNTYGV CGG L MWESSGWI
Sbjct: 67 APLPKRNAKGELVFPDAPEMSPNLTPREVLQAGSFGGTYFRPIKSGVTGEKYSGVWKELPKDWLEGLSIPKQVASSTYHADVNTYGVKCGGSLEMWESSGWIN 169
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: A0A1W0E686_9MICR (Uncharacterized protein n=1 Tax=Enterocytozoon hepatopenaei TaxID=646526 RepID=A0A1W0E686_9MICR) HSP 1 Score: 159 bits (401), Expect = 2.190e-45 Identity = 64/98 (65.31%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 280 RNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWIK 573
R++ G++VF D+P F+PNL+PK+VL++GSFGGTYFRPI+SS+T K+YRD WKEFP+DWFEGL++ ++V S TY N VN Y V CGG L MWE SGWIK
Sbjct: 51 RDKDGKIVFDDYPDFKPNLTPKEVLQLGSFGGTYFRPIESSITNKSYRDVWKEFPSDWFEGLNITKEVTSLTYYNDVNKYKVKCGGSLQMWEESGWIK 148
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: UPI0010A44F60 (uncharacterized protein LOC114791975 isoform X3 n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=UPI0010A44F60) HSP 1 Score: 158 bits (400), Expect = 3.770e-45 Identity = 67/104 (64.42%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 259 GKAPRPKRNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWI 570
G++ K+N++G+LVF DFP F+PN++PK+VL+ GSFGGTYFRPI SS+T + Y+ WKE P DW EGLD+ RQVASPTY VNTY V CGG L MWESSGWI
Sbjct: 83 GRSSAVKKNEKGQLVFKDFPDFKPNMTPKEVLQAGSFGGTYFRPIYSSITKQQYKGVWKELPEDWLEGLDINRQVASPTYREGVNTYKVKCGGSLQMWESSGWI 186
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Match: A0A8C4B3D7_9TELE (Uncharacterized LOC114791975 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4B3D7_9TELE) HSP 1 Score: 158 bits (400), Expect = 9.070e-45 Identity = 67/104 (64.42%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 259 GKAPRPKRNQQGELVFPDFPKFRPNLSPKQVLRMGSFGGTYFRPIKSSVTGKTYRDQWKEFPADWFEGLDVKRQVASPTYLNSVNTYGVHCGGDLHMWESSGWI 570
G++ K+N++G+LVF DFP F+PN++PK+VL+ GSFGGTYFRPI SS+T + Y+ WKE P DW EGLD+ RQVASPTY VNTY V CGG L MWESSGWI
Sbjct: 83 GRSSAVKKNEKGQLVFKDFPDFKPNMTPKEVLQAGSFGGTYFRPIYSSITKQQYKGVWKELPEDWLEGLDINRQVASPTYREGVNTYKVKCGGSLQMWESSGWI 186 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig155.3183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig155.3183.1 >prot_E-siliculosus-1a_F_contig155.3183.1 ID=prot_E-siliculosus-1a_F_contig155.3183.1|Name=mRNA_E-siliculosus-1a_F_contig155.3183.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=192bp MPPKRRKADEAATAAAATASKKPRKTLSSGSSRSSGGTSKSAAGKAKAGAback to top mRNA from alignment at E-siliculosus-1a_F_contig155:77703..78497+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig155.3183.1 ID=mRNA_E-siliculosus-1a_F_contig155.3183.1|Name=mRNA_E-siliculosus-1a_F_contig155.3183.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=795bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig155:77703..78497+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig155:77703..78497+ >mRNA_E-siliculosus-1a_F_contig155.3183.1 ID=mRNA_E-siliculosus-1a_F_contig155.3183.1|Name=mRNA_E-siliculosus-1a_F_contig155.3183.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1152bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig155:77703..78497+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |