mRNA_E-siliculosus-1a_F_contig15433.3150.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15433.3150.1
Unique NamemRNA_E-siliculosus-1a_F_contig15433.3150.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A0P7Y362_9GAMM (Methylmalonate-semialdehyde dehydrogenase (Acylating) n=141 Tax=root TaxID=1 RepID=A0A0P7Y362_9GAMM)

HSP 1 Score: 593 bits (1530), Expect = 9.560e-211
Identity = 294/322 (91.30%), Postives = 308/322 (95.65%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TFVLKPSEQDPSSTMRLVELAHEAGIP GVLNVVHGGP+VANQIADHQDIKALSFIGSTHVGSLLYNR+AAAGKRMQAMMGAKNHCVVMPDANRSQAI++LLGSAFGAAGQRCMANSVVVLVG+AR+WL DIV  AR M VGPGTQ DADLGPLVSP A++RV RLI AGEKEGA+LMVDGR   VEGYPDGNFVGPTLFADVTA+MT+YREEIFGPVLCVV+V+TLD+AIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSR SKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI
Sbjct:  171 TFVLKPSEQDPSSTMRLVELAHEAGIPAGVLNVVHGGPEVANQIADHQDIKALSFIGSTHVGSLLYNRSAAAGKRMQAMMGAKNHCVVMPDANRSQAIDSLLGSAFGAAGQRCMANSVVVLVGEARQWLDDIVQGARGMTVGPGTQRDADLGPLVSPQAKERVERLITAGEKEGARLMVDGRGCTVEGYPDGNFVGPTLFADVTAEMTVYREEIFGPVLCVVNVDTLDDAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRGSKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 492
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BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: UPI001F174B0C (CoA-acylating methylmalonate-semialdehyde dehydrogenase n=1 Tax=Halomonas sp. M5N1S17 TaxID=2907158 RepID=UPI001F174B0C)

HSP 1 Score: 590 bits (1521), Expect = 2.240e-209
Identity = 290/322 (90.06%), Postives = 307/322 (95.34%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TFVLKPSEQDPSSTMRLVELAHEAG+P GVLNVVHGGPDVANQIADH DIKALSFIGS+HVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVG+A+ W+ DIVD AR MKVGPGTQ DADLGPLVSPAAR+RV+RLIDAGE+EGAKL+VDGR  +V GY  GNFVGPT+FADVT +MTIYREEIFGPVLCVVSV+TLD+AI F+NANPNGNGTSIFTNSGWVARRFE+DIDVGQ+GINVPIPVPVAYFSFTGSR SKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI
Sbjct:  171 TFVLKPSEQDPSSTMRLVELAHEAGVPAGVLNVVHGGPDVANQIADHTDIKALSFIGSSHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGEAKAWIDDIVDGARNMKVGPGTQRDADLGPLVSPAARERVIRLIDAGEQEGAKLLVDGRGYEVSGYEHGNFVGPTVFADVTPEMTIYREEIFGPVLCVVSVDTLDKAIEFVNANPNGNGTSIFTNSGWVARRFESDIDVGQVGINVPIPVPVAYFSFTGSRGSKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 492
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BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A1R4HSQ8_9GAMM (Methylmalonate-semialdehyde dehydrogenase n=5 Tax=Halomonas TaxID=2745 RepID=A0A1R4HSQ8_9GAMM)

HSP 1 Score: 588 bits (1515), Expect = 1.830e-208
Identity = 291/322 (90.37%), Postives = 304/322 (94.41%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TFVLKPSEQDPSSTMRLVELAHEAG+P GVLNVVHGGP+VANQI DH  IKALSFIGSTHVGSLLY RAA AGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVG+AR+W+ DIVDAA  MKVGPGTQ DADLGPLVSPAA++RVL LI+ GEKEGA L++DGRN QV  YP GNFVGPTLF DVTA+MTIYREEIFGPVLCVV+VETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQ+GINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI
Sbjct:  171 TFVLKPSEQDPSSTMRLVELAHEAGVPAGVLNVVHGGPEVANQIVDHPTIKALSFIGSTHVGSLLYKRAADAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGEARQWIDDIVDAAGQMKVGPGTQQDADLGPLVSPAAKERVLGLIETGEKEGATLLIDGRNCQVHDYPKGNFVGPTLFTDVTAEMTIYREEIFGPVLCVVNVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQVGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 492
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BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A368TZP9_9GAMM (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=2 Tax=Halomonas TaxID=2745 RepID=A0A368TZP9_9GAMM)

HSP 1 Score: 586 bits (1511), Expect = 7.420e-208
Identity = 286/322 (88.82%), Postives = 306/322 (95.03%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TF+LKPSEQDPSSTMRLVELAHEAGIP GVLNVVHGGPDVANQI DH DIKALSFIGSTHVG+ +Y RA+ AGKR+Q+MMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWL DIV+ AR MKVGPGTQ DADLGPLVSPAA++RV RLI  GEKEGA+LM+DGR  +VEGYP GNFVGPTLFADVTADMTIYREE+FGPVLCVV+VETLD+AIAF+NANPNGNGTSIFTNSGWVARR+E+DIDVGQ+GINVPIPVPVAYFSFTGSRASKLGD+GPNGKQAIAFWTQTKTVTARWFEPENVSSGI
Sbjct:  171 TFILKPSEQDPSSTMRLVELAHEAGIPAGVLNVVHGGPDVANQICDHTDIKALSFIGSTHVGTHIYRRASDAGKRVQSMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLEDIVEGARNMKVGPGTQRDADLGPLVSPAAKERVERLIGVGEKEGARLMIDGRGCEVEGYPKGNFVGPTLFADVTADMTIYREEVFGPVLCVVNVETLDDAIAFVNANPNGNGTSIFTNSGWVARRYESDIDVGQVGINVPIPVPVAYFSFTGSRASKLGDMGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 492
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BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A1I7IX44_9GAMM (Malonate-semialdehyde dehydrogenase (Acetylating) / methylmalonate-semialdehyde dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1I7IX44_9GAMM)

HSP 1 Score: 585 bits (1508), Expect = 2.120e-207
Identity = 285/322 (88.51%), Postives = 305/322 (94.72%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TF+LKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGP+VANQIADH DIKALSFIGSTHVG+LLYNRAAAAGKRMQ+MMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVG+AR+WL ++V+ AR M VGPGTQ DADLGPLVSP AR+RV  LID GEKEGA+LM+DGR  QV+GYPDGNFVGPT+FADVTA+MTIYREEIFGPVLCV  V+TL +AIAF+NANPNGNGTSIFTNSGWVA+RFE DIDVGQ+GINVPIPVPVAYFSFTGSR SKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI
Sbjct:  171 TFLLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPEVANQIADHPDIKALSFIGSTHVGTLLYNRAAAAGKRMQSMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGEARQWLDELVEGARQMTVGPGTQRDADLGPLVSPQARERVEHLIDVGEKEGARLMLDGRGCQVDGYPDGNFVGPTVFADVTAEMTIYREEIFGPVLCVAGVDTLSDAIAFVNANPNGNGTSIFTNSGWVAKRFERDIDVGQVGINVPIPVPVAYFSFTGSRGSKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 492
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BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A291P3Z1_9GAMM (Methylmalonate-semialdehyde dehydrogenase n=11 Tax=Halomonadaceae TaxID=28256 RepID=A0A291P3Z1_9GAMM)

HSP 1 Score: 581 bits (1498), Expect = 7.040e-206
Identity = 287/322 (89.13%), Postives = 303/322 (94.10%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TFVLKPSEQDPSSTMRLVELAHEAG+P GVLNVVHGGPDVAN IADH DIKALSFIGSTHVG+ LY RA+ AGKRMQ+MMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVG+AREWL D+V+ AR MKVGPGTQ DADLGPLVSPAA++RV  LI  GE+EGAKL+VDGR  QVEGYPDGNFVGPTLF++VT +MTIYREEIFGPVLCVVSV+TLDEAI FINANPNGNGTSIFTNSGWVARRFETDIDVGQ+GINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAI FWTQTKTVTARWFEPENVSSGI
Sbjct:  171 TFVLKPSEQDPSSTMRLVELAHEAGVPAGVLNVVHGGPDVANHIADHPDIKALSFIGSTHVGTQLYRRASEAGKRMQSMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGEAREWLDDLVEGARNMKVGPGTQRDADLGPLVSPAAKERVEGLIATGEQEGAKLLVDGRGCQVEGYPDGNFVGPTLFSEVTPEMTIYREEIFGPVLCVVSVDTLDEAIDFINANPNGNGTSIFTNSGWVARRFETDIDVGQVGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIQFWTQTKTVTARWFEPENVSSGI 492
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A1E7PUG6_9GAMM (Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Marinobacter sp. X15-166B TaxID=1897620 RepID=A0A1E7PUG6_9GAMM)

HSP 1 Score: 581 bits (1498), Expect = 7.040e-206
Identity = 283/322 (87.89%), Postives = 306/322 (95.03%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TF+LKPSEQDPSS+MRLVELAHEAG+PPGVLNVVHGGPDVANQIADH DIKALSFIGST VG LLY+RAAAAGKRMQAM+GAKNHCV+MPDANRSQA++NLLGSA+GAAGQRCMANSVVVLVG+AREWL+D+++  R MKVGPGTQLDADLGPLVSPAA++RV RLI  G +EGA L VDGR  QVEGYPDGNFVGPTLF++VTADMTIYREE+FGPVLCVVSVETLDEAIAFINANPNGNGTSI+TNSGWVARRFETDIDVGQ+GINVPIPVPVAYFSFTGSR SKLGDLGPNGKQAI FWTQTKTVTARW+EPENVSSGI
Sbjct:  171 TFLLKPSEQDPSSSMRLVELAHEAGVPPGVLNVVHGGPDVANQIADHADIKALSFIGSTRVGQLLYDRAAAAGKRMQAMLGAKNHCVIMPDANRSQAVHNLLGSAYGAAGQRCMANSVVVLVGEAREWLADLIEETRTMKVGPGTQLDADLGPLVSPAAKERVERLIATGVEEGATLEVDGRGCQVEGYPDGNFVGPTLFSNVTADMTIYREEVFGPVLCVVSVETLDEAIAFINANPNGNGTSIYTNSGWVARRFETDIDVGQVGINVPIPVPVAYFSFTGSRGSKLGDLGPNGKQAINFWTQTKTVTARWYEPENVSSGI 492
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A7W5ETW6_9GAMM (Malonate-semialdehyde dehydrogenase (Acetylating)/methylmalonate-semialdehyde dehydrogenase n=26 Tax=Halomonas TaxID=2745 RepID=A0A7W5ETW6_9GAMM)

HSP 1 Score: 579 bits (1493), Expect = 4.050e-205
Identity = 284/322 (88.20%), Postives = 304/322 (94.41%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TFVLKPSEQDPSSTMRLVELAHEAG+P GVLNVVHGGP+VANQIADH DIKALSFIGSTHVG+ LY RA+ AGKRMQ+MMGAKNHCV+MPDANRSQAI+NLLGSAFGAAGQRCMANSVVVLVG+AR WL DIVD AR MKVGPG Q DADLGPLVSPAA++RV+RLI+AGE+EGA L+VDGR  +VEGYP GNFVGPT+FADV+A+MTIYREEIFGPVLCVVSVETLDEAI  INANPNGNGTSIFTNSGWVARRFETDIDVGQ+GINVPIPVPVAYFSFTGSR SKLGDLGPNGKQAIAFWTQTKTVTARWFEPEN+SSGI
Sbjct:  171 TFVLKPSEQDPSSTMRLVELAHEAGVPAGVLNVVHGGPEVANQIADHPDIKALSFIGSTHVGTQLYRRASEAGKRMQSMMGAKNHCVIMPDANRSQAIHNLLGSAFGAAGQRCMANSVVVLVGEARAWLDDIVDGARNMKVGPGIQKDADLGPLVSPAAKERVIRLIEAGEQEGASLLVDGRGHEVEGYPHGNFVGPTVFADVSAEMTIYREEIFGPVLCVVSVETLDEAIELINANPNGNGTSIFTNSGWVARRFETDIDVGQVGINVPIPVPVAYFSFTGSRGSKLGDLGPNGKQAIAFWTQTKTVTARWFEPENISSGI 492
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A7W0ADG6_9GAMM (CoA-acylating methylmalonate-semialdehyde dehydrogenase n=10 Tax=Halomonas TaxID=2745 RepID=A0A7W0ADG6_9GAMM)

HSP 1 Score: 578 bits (1489), Expect = 1.640e-204
Identity = 284/322 (88.20%), Postives = 303/322 (94.10%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TFVLKPSEQDPSSTMRLVELAHEAG+P GVL+VVHGGPDVANQI DH DIKALSFIGSTHVG+ +Y RA+ AGKR+Q+MMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVG+A +WL DIV+ AR MKVGPGTQ DADLGPLVSPAA++RV RLIDAGEKEGA+L+VDGR  Q EGYPDGNFVG T+FADV  +M+IYREEIFGPVLCVVSV+TLDEAI FINANPNGNGTSIFTNSGWVARRFETDIDVGQ+GINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI
Sbjct:  171 TFVLKPSEQDPSSTMRLVELAHEAGVPAGVLSVVHGGPDVANQICDHPDIKALSFIGSTHVGTHIYRRASEAGKRVQSMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGEANQWLDDIVEGARGMKVGPGTQRDADLGPLVSPAAKERVERLIDAGEKEGARLLVDGRGYQEEGYPDGNFVGATVFADVKPEMSIYREEIFGPVLCVVSVDTLDEAIEFINANPNGNGTSIFTNSGWVARRFETDIDVGQVGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 492
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Match: A0A2A9FTA7_9GAMM (Malonate-semialdehyde dehydrogenase (Acetylating)/methylmalonate-semialdehyde dehydrogenase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2A9FTA7_9GAMM)

HSP 1 Score: 571 bits (1472), Expect = 6.110e-202
Identity = 279/322 (86.65%), Postives = 303/322 (94.10%), Query Frame = 1 
Query:    1 TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDIKALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINNLLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDADLGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLFADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSGWVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIAFWTQTKTVTARWFEPENVSSGI 966
            TFV KPSEQDPSS+MRLVELAHEAG+PPGVLNVVHGGP+VANQIADH DI+ALSFIGSTHVG LLY+RAAAAGKRMQAMMGAKNHCVVMPDANRSQAIN+LLGSA+GAAGQRCMANSVVVLVG+AREWL DI++  R+MKVGPGTQLDADLGPLVSPAA+ RV  LI  GE+EGA + VDGR  QVEGYP+GNFVGPTLF++VTADMT+YREEIFGPVLCVV+VET+DEAI FINANPNGNGTSIFTNSGWVARRF +DIDVGQ+GINV IPVPVAYFSFTGSR SKLGDLGPNGKQAI+FWTQTKTVTARWFEP+NVSSGI
Sbjct:  171 TFVFKPSEQDPSSSMRLVELAHEAGVPPGVLNVVHGGPEVANQIADHADIQALSFIGSTHVGQLLYDRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINSLLGSAYGAAGQRCMANSVVVLVGEAREWLEDIIEGTRSMKVGPGTQLDADLGPLVSPAAKARVESLIATGEQEGATMEVDGRGCQVEGYPNGNFVGPTLFSNVTADMTVYREEIFGPVLCVVNVETMDEAIEFINANPNGNGTSIFTNSGWVARRFVSDIDVGQVGINVAIPVPVAYFSFTGSRGSKLGDLGPNGKQAISFWTQTKTVTARWFEPDNVSSGI 492
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15433.3150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P7Y362_9GAMM9.560e-21191.30Methylmalonate-semialdehyde dehydrogenase (Acylati... [more]
UPI001F174B0C2.240e-20990.06CoA-acylating methylmalonate-semialdehyde dehydrog... [more]
A0A1R4HSQ8_9GAMM1.830e-20890.37Methylmalonate-semialdehyde dehydrogenase n=5 Tax=... [more]
A0A368TZP9_9GAMM7.420e-20888.82Methylmalonate-semialdehyde dehydrogenase (CoA acy... [more]
A0A1I7IX44_9GAMM2.120e-20788.51Malonate-semialdehyde dehydrogenase (Acetylating) ... [more]
A0A291P3Z1_9GAMM7.040e-20689.13Methylmalonate-semialdehyde dehydrogenase n=11 Tax... [more]
A0A1E7PUG6_9GAMM7.040e-20687.89Methylmalonate-semialdehyde dehydrogenase (Acylati... [more]
A0A7W5ETW6_9GAMM4.050e-20588.20Malonate-semialdehyde dehydrogenase (Acetylating)/... [more]
A0A7W0ADG6_9GAMM1.640e-20488.20CoA-acylating methylmalonate-semialdehyde dehydrog... [more]
A0A2A9FTA7_9GAMM6.110e-20286.65Malonate-semialdehyde dehydrogenase (Acetylating)/... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15433contigE-siliculosus-1a_F_contig15433:2..967 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size966
Model size966
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
BiGG ReactioniJN746.PP_4667
COG Functional cat.C
EC1.2.1.18,1.2.1.27
EggNOG OGs1MUHV@1224,1RNFN@1236,1XIE7@135619,COG1012@1,COG1012@2
EggNOG free text desc.methylmalonate-semialdehyde dehydrogenase
KEGG ModuleM00013
KEGG Pathwayko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200
KEGG ReactionR00705,R00706,R00922,R00935
KEGG koko:K00140
KEGG rclassRC00004,RC02723,RC02817
Preferred namemmsA
Seed eggNOG ortholog1380358.JADJ01000024_gene2268
Seed ortholog evalue4.4e-180
Seed ortholog score637.1
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928052.5467665-CDS-E-siliculosus-1a_F_contig15433:1..9671622928052.5467665-CDS-E-siliculosus-1a_F_contig15433:1..967Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15433 2..967 +
1696318788.7192435-CDS-E-siliculosus-1a_F_contig15433:1..9671696318788.7192435-CDS-E-siliculosus-1a_F_contig15433:1..967Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15433 2..967 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15433.3150.1prot_E-siliculosus-1a_F_contig15433.3150.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15433 2..967 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15433.3150.1

>prot_E-siliculosus-1a_F_contig15433.3150.1 ID=prot_E-siliculosus-1a_F_contig15433.3150.1|Name=mRNA_E-siliculosus-1a_F_contig15433.3150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=322bp
TFVLKPSEQDPSSTMRLVELAHEAGIPPGVLNVVHGGPDVANQIADHQDI
KALSFIGSTHVGSLLYNRAAAAGKRMQAMMGAKNHCVVMPDANRSQAINN
LLGSAFGAAGQRCMANSVVVLVGDAREWLSDIVDAARAMKVGPGTQLDAD
LGPLVSPAARDRVLRLIDAGEKEGAKLMVDGRNVQVEGYPDGNFVGPTLF
ADVTADMTIYREEIFGPVLCVVSVETLDEAIAFINANPNGNGTSIFTNSG
WVARRFETDIDVGQIGINVPIPVPVAYFSFTGSRASKLGDLGPNGKQAIA
FWTQTKTVTARWFEPENVSSGI
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mRNA from alignment at E-siliculosus-1a_F_contig15433:2..967+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15433.3150.1 ID=mRNA_E-siliculosus-1a_F_contig15433.3150.1|Name=mRNA_E-siliculosus-1a_F_contig15433.3150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=966bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15433:2..967+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACCTTTGTGCTCAAACCTTCCGAACAAGACCCCAGTTCCACCATGCGCTT
AGTGGAGCTGGCACACGAGGCGGGCATTCCGCCGGGCGTGCTCAACGTAG
TACATGGTGGGCCGGATGTGGCCAATCAAATTGCTGATCATCAGGATATT
AAAGCGCTTTCATTCATTGGCTCTACTCATGTTGGTTCGCTGCTGTACAA
CCGTGCGGCAGCGGCAGGCAAGCGAATGCAGGCGATGATGGGCGCTAAAA
ATCACTGCGTCGTCATGCCTGATGCTAACCGTAGCCAAGCAATCAACAAC
CTGTTGGGCTCAGCCTTTGGTGCTGCCGGTCAGCGCTGTATGGCGAACTC
AGTGGTTGTGCTGGTGGGCGATGCGCGGGAATGGTTGAGCGATATTGTAG
ATGCCGCACGAGCAATGAAAGTAGGTCCCGGTACCCAACTCGATGCAGAT
TTAGGACCGCTAGTATCCCCGGCTGCCCGGGATCGTGTATTGCGCTTGAT
CGATGCGGGTGAGAAAGAGGGCGCCAAGTTGATGGTGGACGGGCGTAACG
TTCAGGTAGAGGGTTACCCTGACGGTAACTTCGTAGGACCAACGCTGTTT
GCTGATGTGACGGCGGACATGACCATTTACCGTGAGGAAATTTTTGGTCC
GGTATTGTGTGTGGTGAGCGTTGAAACGTTGGATGAGGCGATTGCATTTA
TTAATGCCAACCCTAACGGTAATGGTACCTCGATCTTTACCAACTCAGGC
TGGGTTGCGCGCCGCTTTGAAACCGATATTGATGTTGGTCAAATCGGTAT
CAACGTACCTATTCCAGTGCCTGTGGCCTATTTCAGCTTCACCGGGTCTC
GCGCTTCAAAGCTGGGGGATTTAGGCCCTAACGGTAAACAGGCGATCGCA
TTTTGGACGCAAACAAAAACCGTTACCGCGCGCTGGTTTGAGCCAGAAAA
TGTATCCAGCGGTATT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15433:2..967+

>mRNA_E-siliculosus-1a_F_contig15433.3150.1 ID=mRNA_E-siliculosus-1a_F_contig15433.3150.1|Name=mRNA_E-siliculosus-1a_F_contig15433.3150.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1932bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15433:2..967+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACCTTTGTGCTCAAACCTTCCGAACAAGACCCCAGTTCCACCATGCGCTT
AGTGGAGCTGGCACACGAGGCGGGCATTCCGCCGGGCGTGCTCAACGTAG
TACATGGTGGGCCGGATGTGGCCAATCAAATTGCTGATCATCAGGATATT
AAAGCGCTTTCATTCATTGGCTCTACTCATGTTGGTTCGCTGCTGTACAA
CCGTGCGGCAGCGGCAGGCAAGCGAATGCAGGCGATGATGGGCGCTAAAA
ATCACTGCGTCGTCATGCCTGATGCTAACCGTAGCCAAGCAATCAACAAC
CTGTTGGGCTCAGCCTTTGGTGCTGCCGGTCAGCGCTGTATGGCGAACTC
AGTGGTTGTGCTGGTGGGCGATGCGCGGGAATGGTTGAGCGATATTGTAG
ATGCCGCACGAGCAATGAAAGTAGGTCCCGGTACCCAACTCGATGCAGAT
TTAGGACCGCTAGTATCCCCGGCTGCCCGGGATCGTGTATTGCGCTTGAT
CGATGCGGGTGAGAAAGAGGGCGCCAAGTTGATGGTGGACGGGCGTAACG
TTCAGGTAGAGGGTTACCCTGACGGTAACTTCGTAGGACCAACGCTGTTT
GCTGATGTGACGGCGGACATGACCATTTACCGTGAGGAAATTTTTGGTCC
GGTATTGTGTGTGGTGAGCGTTGAAACGTTGGATGAGGCGATTGCATTTA
TTAATGCCAACCCTAACGGTAATGGTACCTCGATCTTTACCAACTCAGGC
TGGGTTGCGCGCCGCTTTGAAACCGATATTGATGTTGGTCAAATCGGTAT
CAACGTACCTATTCCAGTGCCTGTGGCCTATTTCAGCTTCACCGGGTCTC
GCGCTTCAAAGCTGGGGGATTTAGGCCCTAACGGTAAACAGGCGATCGCA
TTTTGGACGCAAACAAAAACCGTTACCGCGCGCTGGTTTGAGCCAGAAAA
TGTATCCAGCGGTATTACCTTTGTGCTCAAACCTTCCGAACAAGACCCCA
GTTCCACCATGCGCTTAGTGGAGCTGGCACACGAGGCGGGCATTCCGCCG
GGCGTGCTCAACGTAGTACATGGTGGGCCGGATGTGGCCAATCAAATTGC
TGATCATCAGGATATTAAAGCGCTTTCATTCATTGGCTCTACTCATGTTG
GTTCGCTGCTGTACAACCGTGCGGCAGCGGCAGGCAAGCGAATGCAGGCG
ATGATGGGCGCTAAAAATCACTGCGTCGTCATGCCTGATGCTAACCGTAG
CCAAGCAATCAACAACCTGTTGGGCTCAGCCTTTGGTGCTGCCGGTCAGC
GCTGTATGGCGAACTCAGTGGTTGTGCTGGTGGGCGATGCGCGGGAATGG
TTGAGCGATATTGTAGATGCCGCACGAGCAATGAAAGTAGGTCCCGGTAC
CCAACTCGATGCAGATTTAGGACCGCTAGTATCCCCGGCTGCCCGGGATC
GTGTATTGCGCTTGATCGATGCGGGTGAGAAAGAGGGCGCCAAGTTGATG
GTGGACGGGCGTAACGTTCAGGTAGAGGGTTACCCTGACGGTAACTTCGT
AGGACCAACGCTGTTTGCTGATGTGACGGCGGACATGACCATTTACCGTG
AGGAAATTTTTGGTCCGGTATTGTGTGTGGTGAGCGTTGAAACGTTGGAT
GAGGCGATTGCATTTATTAATGCCAACCCTAACGGTAATGGTACCTCGAT
CTTTACCAACTCAGGCTGGGTTGCGCGCCGCTTTGAAACCGATATTGATG
TTGGTCAAATCGGTATCAACGTACCTATTCCAGTGCCTGTGGCCTATTTC
AGCTTCACCGGGTCTCGCGCTTCAAAGCTGGGGGATTTAGGCCCTAACGG
TAAACAGGCGATCGCATTTTGGACGCAAACAAAAACCGTTACCGCGCGCT
GGTTTGAGCCAGAAAATGTATCCAGCGGTATT
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