mRNA_E-siliculosus-1a_F_contig15430.3148.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: A0A3B0TP18_9ZZZZ (Outer membrane protein H n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0TP18_9ZZZZ) HSP 1 Score: 245 bits (626), Expect = 8.030e-81 Identity = 137/169 (81.07%), Postives = 153/169 (90.53%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MKQVKKIAVA++LFIA T FVNAQSKVAHIDVQKLL++MPEMK AESELKKLSETYQADIQASTTEL+NKY QY E+ ++++EEN KRA ELQG +KSI + QQ AQQE+QKKQAELF PISE+AKAAIEKVAA QG+DYVIDAQ GGGLIVAKGKDLL+EVKQELGF
Sbjct: 1 MKQVKKIAVALILFIAVTGFVNAQSKVAHIDVQKLLSEMPEMKTAESELKKLSETYQADIQASTTELRNKYTQYSNESASKTEEENKKRAEELQGYEKSIGEAQQAAQQELQKKQAELFGPISEKAKAAIEKVAATQGFDYVIDAQAGGGLIVAKGKDLLSEVKQELGF 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: A0A5S3PTD7_9FLAO (OmpH family outer membrane protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PTD7_9FLAO) HSP 1 Score: 241 bits (615), Expect = 3.800e-79 Identity = 139/169 (82.25%), Postives = 152/169 (89.94%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MK +KKIAVA+VLFIAA+SFVNAQSKVAHIDVQKLLADMP MKAAESELKKLSETYQADIQAS TELQNKY Y+ EA +++EEN KRALELQG +KSI + QQ AQQE+QKKQAELFAPISERAKAAI+KVAAAQG+DYV+DAQ GGLIV KGKDLL EVKQELGF
Sbjct: 1 MKHLKKIAVALVLFIAASSFVNAQSKVAHIDVQKLLADMPAMKAAESELKKLSETYQADIQASMTELQNKYTLYKNEAGAKTEEENQKRALELQGFEKSIGEAQQAAQQEIQKKQAELFAPISERAKAAIDKVAAAQGFDYVLDAQQPGGLIVFKGKDLLPEVKQELGF 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: A0A223V357_9FLAO (Uncharacterized protein n=5 Tax=Maribacter TaxID=252356 RepID=A0A223V357_9FLAO) HSP 1 Score: 238 bits (607), Expect = 6.280e-78 Identity = 132/169 (78.11%), Postives = 155/169 (91.72%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MKQVKKIAVA++LF+AATSFVNAQSKVAHIDV +LL+ MPEMKAAE+ELKKL ETY ADIQAS TEL+NKY QY+ EA ++SKEEN+KRA+ELQG++K++ +FQQ AQQE+QKKQAELFAPISE+AKAAIE+VA AQG+DYVIDAQVG GLIVA GKDLLA+VK+ELG
Sbjct: 1 MKQVKKIAVALMLFVAATSFVNAQSKVAHIDVTQLLSAMPEMKAAEAELKKLQETYGADIQASMTELRNKYTQYQNEAASKSKEENEKRAVELQGMEKTVGEFQQNAQQEIQKKQAELFAPISEKAKAAIERVANAQGFDYVIDAQVGSGLIVANGKDLLADVKKELGI 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: A0A1B7ZFM6_9FLAO (Uncharacterized protein n=24 Tax=root TaxID=1 RepID=A0A1B7ZFM6_9FLAO) HSP 1 Score: 232 bits (591), Expect = 1.710e-75 Identity = 129/169 (76.33%), Postives = 150/169 (88.76%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MKQVK+I +A+ L +A TSFVNAQSKVAHIDV +LL+ MPEMK+AE+ELKKL ETY ADIQAS TEL+NK+ QY+ EA +SKEENDKRA+ELQG +K+I + QQ AQQE QKKQAELFAPISE+AKAAIEKVAAAQG+DYVIDAQ GGGLIVAKGKDLLA+VK++LGF
Sbjct: 1 MKQVKQIVIALFLLVATTSFVNAQSKVAHIDVTQLLSAMPEMKSAEAELKKLQETYNADIQASMTELRNKFTQYQNEAAAKSKEENDKRAVELQGYEKNIGEAQQAAQQEFQKKQAELFAPISEKAKAAIEKVAAAQGFDYVIDAQAGGGLIVAKGKDLLADVKKQLGF 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: G0LC33_ZOBGA (Molecular chaperone Skp n=12 Tax=Flavobacteriaceae TaxID=49546 RepID=G0LC33_ZOBGA) HSP 1 Score: 230 bits (587), Expect = 6.960e-75 Identity = 128/169 (75.74%), Postives = 151/169 (89.35%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MK +KKIAVA+VLF+AAT FVNAQSKVAHIDV +LL+ MPEMKAAE+ELKKLSETY ADI++S TE QNK Y+ EAP++SKEEN+KRA+ELQG+QK+I + QQ AQ+E+QKKQ ELFAPIS++AKAAIEKVAAAQG+DYVIDAQ GGGLIVAKGKDLL +VK+ELG
Sbjct: 1 MKHLKKIAVALVLFVAATGFVNAQSKVAHIDVTQLLSAMPEMKAAEAELKKLSETYNADIESSMTEFQNKATLYQNEAPSKSKEENEKRAIELQGVQKNIGEAQQAAQRELQKKQQELFAPISDKAKAAIEKVAAAQGFDYVIDAQPGGGLIVAKGKDLLPDVKKELGI 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: UPI0011EE999D (OmpH family outer membrane protein n=1 Tax=Pareuzebyella sediminis TaxID=2607998 RepID=UPI0011EE999D) HSP 1 Score: 229 bits (585), Expect = 1.400e-74 Identity = 128/169 (75.74%), Postives = 151/169 (89.35%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MK VKKIAVA++LF+AATSFVNAQSKVAHIDV LL+ MPEMKAAE+ELKKLSETY ADI++S TEL+NKY QYE EA ++SKEEN+KRALELQG++ +I + QQ AQ+E+QKKQ ELFAPIS++AKAAIEKVAA QG+DYVIDAQ GGGLIVA+GKDLL +VK+ELG
Sbjct: 1 MKHVKKIAVAVLLFVAATSFVNAQSKVAHIDVTLLLSAMPEMKAAEAELKKLSETYNADIESSMTELRNKYTQYENEAASKSKEENEKRALELQGVRNNIGEAQQAAQRELQKKQQELFAPISDKAKAAIEKVAAEQGFDYVIDAQPGGGLIVAQGKDLLVDVKKELGI 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: A0A2N0FXB3_9FLAO (Periplasmic chaperone for outer membrane proteins Skp n=6 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A2N0FXB3_9FLAO) HSP 1 Score: 228 bits (581), Expect = 5.700e-74 Identity = 128/169 (75.74%), Postives = 149/169 (88.17%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MK VKKIA AIVLF+A T FVNAQSKVAHIDV +LL+ MPEMKAAE+ELKKLSETY ADI++S TEL+NKY QYE EA ++SKEEN+KRA ELQG+QK+I + QQ AQ+E+QKKQ ELF+PIS++AKAAIEKVAAAQG+DYVIDAQ G GLIVAKGKDLL +VK+ELG
Sbjct: 1 MKNVKKIAAAIVLFVAFTGFVNAQSKVAHIDVTQLLSAMPEMKAAEAELKKLSETYNADIESSMTELRNKYTQYENEATSKSKEENEKRAAELQGVQKNIGEAQQAAQRELQKKQQELFSPISDKAKAAIEKVAAAQGFDYVIDAQQGSGLIVAKGKDLLIDVKKELGI 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: A0A221UX35_9FLAO (Periplasmic chaperone n=15 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A221UX35_9FLAO) HSP 1 Score: 228 bits (580), Expect = 8.090e-74 Identity = 125/169 (73.96%), Postives = 150/169 (88.76%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MKQ+KKIAVAIVLF+AATSFVNAQ+K+AHIDVQKLL++MPEMKAAE+ELKKL ETY+ADI++S TELQNKY QY+ E+ ++S+EEN KRALELQG +K+I + QQTAQQE+QKKQ EL PI+E+AK AIE VAAAQG DYV+DA G GLIVAKGKD+L EVK++LGF
Sbjct: 1 MKQIKKIAVAIVLFVAATSFVNAQAKIAHIDVQKLLSEMPEMKAAEAELKKLQETYRADIESSMTELQNKYTQYKNESSSKSEEENQKRALELQGFEKNIGEAQQTAQQELQKKQGELLGPITEKAKKAIESVAAAQGIDYVMDATQGSGLIVAKGKDILPEVKKQLGF 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: UPI000478AC30 (OmpH family outer membrane protein n=1 Tax=Maribacter antarcticus TaxID=505250 RepID=UPI000478AC30) HSP 1 Score: 224 bits (572), Expect = 1.340e-72 Identity = 124/169 (73.37%), Postives = 145/169 (85.80%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MK + K+ VA++LF+A TSFVNAQSKVAHIDV +LL MPEMK AE+EL KL ETY ADIQAS TEL+NK QY+ EAP+++KEEN+KRA+ELQG +K+I + QQ AQQE QKKQ ELFAPISE+AKAAIEKVA AQGYDYVIDAQ G GLIVA+GKDLLA+VK+ELGF
Sbjct: 1 MKHLNKVVVALMLFVATTSFVNAQSKVAHIDVTQLLGAMPEMKTAEAELMKLQETYNADIQASMTELRNKVTQYQNEAPSKTKEENEKRAIELQGFEKNIGEAQQAAQQEFQKKQGELFAPISEKAKAAIEKVATAQGYDYVIDAQQGAGLIVARGKDLLADVKKELGF 169
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Match: A0A1X7HZN8_9FLAO (Outer membrane protein n=2 Tax=Arenibacter TaxID=178469 RepID=A0A1X7HZN8_9FLAO) HSP 1 Score: 224 bits (570), Expect = 2.690e-72 Identity = 124/169 (73.37%), Postives = 148/169 (87.57%), Query Frame = 1
Query: 1 MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKKLSETYQADIQASTTELQNKYRQYEGEAPNQSKEENDKRALELQGIQKSISDFQQTAQQEMQKKQAELFAPISERAKAAIEKVAAAQGYDYVIDAQVGGGLIVAKGKDLLAEVKQELGF 507
MKQ KKIAVAIVLF+AATSFVNAQ+K+AHIDVQKLL++MPEMKAAE+ELKKL ETY+ADI++S TELQNKY QY+ E+ ++S+EEN KRALELQG +K+I + QQTA QE+QKKQ EL PI+E+AK AIE VAAAQG DYV+DA G GLIVAKGKD+L EVK++LGF
Sbjct: 1 MKQFKKIAVAIVLFVAATSFVNAQAKIAHIDVQKLLSEMPEMKAAEAELKKLQETYRADIESSMTELQNKYTQYKNESSSKSEEENQKRALELQGFEKNIGEAQQTASQELQKKQGELLGPITEKAKKAIEAVAAAQGIDYVMDATQGSGLIVAKGKDILPEVKKQLGF 169 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15430.3148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig15430.3148.1 >prot_E-siliculosus-1a_F_contig15430.3148.1 ID=prot_E-siliculosus-1a_F_contig15430.3148.1|Name=mRNA_E-siliculosus-1a_F_contig15430.3148.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=170bp MKQVKKIAVAIVLFIAATSFVNAQSKVAHIDVQKLLADMPEMKAAESELKback to top mRNA from alignment at E-siliculosus-1a_F_contig15430:39..548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig15430.3148.1 ID=mRNA_E-siliculosus-1a_F_contig15430.3148.1|Name=mRNA_E-siliculosus-1a_F_contig15430.3148.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=510bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15430:39..548+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15430:39..548+ >mRNA_E-siliculosus-1a_F_contig15430.3148.1 ID=mRNA_E-siliculosus-1a_F_contig15430.3148.1|Name=mRNA_E-siliculosus-1a_F_contig15430.3148.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1020bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15430:39..548+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |