mRNA_E-siliculosus-1a_F_contig1540.3133.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1540.3133.1
Unique NamemRNA_E-siliculosus-1a_F_contig1540.3133.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: A0A6H5KX37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX37_9PHAE)

HSP 1 Score: 687 bits (1773), Expect = 2.340e-243
Identity = 352/375 (93.87%), Postives = 357/375 (95.20%), Query Frame = 2
Query:   50 MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRSGGSTNPAADAGSRRGIPVCMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAEXXXXXXXXXXXXEERIKNAKEGDVLPNDLPKEN 1174
            MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRS G TN AADAGSRRG+PVCMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAK+KTVSETVADFY YYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMR+DTTALKEWAEGKTEEDV+EMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGA KDLNLY EQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAE            EERIKNAKEGDVLPNDLPK+N
Sbjct:    1 MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRSSGWTNAAADAGSRRGVPVCMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYKYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRKDTTALKEWAEGKTEEDVMEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGAAKDLNLYQEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAERAEQDAKNDAEEEERIKNAKEGDVLPNDLPKDN 375          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: D8LAS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAS7_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 3.330e-145
Identity = 218/222 (98.20%), Postives = 221/222 (99.55%), Query Frame = 2
Query:   50 MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRSGGSTNPAADAGSRRGIPVCMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDR 715
            MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRSGGSTN AADAGSRRGIP+CMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAK+KTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMR+DTTALKEWAEGKTEEDVVEMIKSDDR
Sbjct:    1 MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRSGGSTNAAADAGSRRGIPMCMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHLRGAKVKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRKDTTALKEWAEGKTEEDVVEMIKSDDR 222          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: H6WBA6_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA6_VAULI)

HSP 1 Score: 183 bits (465), Expect = 1.430e-49
Identity = 103/261 (39.46%), Postives = 157/261 (60.15%), Query Frame = 2
Query:  311 IPDTPMTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDR-------SNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAA 1072
            +PDT M ++FGHL+G  +KTVSET+  F I Y+K +L Q+RT++ + LQSTHL V +  F YD +FG GFY+ F + M+AYP  G+A+LI+ A+V ++   ++P+++++D   + +  E  T  D+    K +++       SNI  D FY                       LY + WG+G+   M+ +G+  TEE +E    ++G S   A +DL  Y + + K+ QAE LFKEIEIREKK++AERLE KA+ A++AA
Sbjct:    7 VPDTAMYKRFGHLKGKDVKTVSETIKSFCIQYQKPILPQYRTMINDVLQSTHLNVVNGCFIYDAMFGYGFYSLFYKLMKAYPGTGEADLIYAAMVTSLD--MEPEKLKEDHETISKLIENMTRADLENSFKGENQNLLSEISSNIKADEFY-----------------------LYTKTWGIGLIEAMDKVGIPLTEENIESLANMIGFSPIKARQDLVQYKDVLDKVAQAEQLFKEIEIREKKKMAERLEEKAKRALEAA 242          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: A0A835ZGT7_9STRA (Thylakoid formation protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGT7_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.290e-48
Identity = 103/253 (40.71%), Postives = 156/253 (61.66%), Query Frame = 2
Query:  314 PDTPMTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAA 1072
            PDTP+ ++FG L+G  +K VSE++  F   Y K +L Q+RT+V + +QSTHL+V DARFKYD +F  G +  F + MR+YP  G+ ++IFD ++  I   LDP Q+  D   L  WA+  +E D+ E +K +  S +      VA               ++ +++LY++ WG+G+  +ME  G+E +EE +E + A++G  A  A +DL  Y E + K  QAE LFKEIEIREKK++A+RLE KA+ A++ A
Sbjct:    4 PDTPLVKRFGSLKGRDVKPVSESMMSFCKCYPKPILPQYRTLVNDLIQSTHLSVVDARFKYDAVFATGLHGIFFKLMRSYPGEGEEKVIFDCLMNCID--LDPAQVTADAEGLISWAKSASEADLEEAMKGEGSSALAA----VANAA------------KEDEFYLYSKNWGLGLILIMEAAGVETSEEKMEHFVALLGFPAGKAKQDLLQYKEVLEKTAQAEQLFKEIEIREKKKMADRLEEKARRALEEA 238          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: A0A836CK23_9STRA (Thylakoid formation protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK23_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.120e-46
Identity = 99/254 (38.98%), Postives = 155/254 (61.02%), Query Frame = 2
Query:  314 PDTPMTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAE 1075
            PDTP  ++FG L G ++KTVS ++  F   YK+ +L Q+RTIV + +QSTHLT+ DARFKYD +F +G +  + R +++YP  G+A+ IFDA+   +   L+   +  D  +L  WA+  +E D+V  +K +  S + +    +AR              +D +++LY+++WG+G+  +ME  G+E T+E + +    VG   A   +DL  Y + + K  QAE LFKEIEIREKK++AERLE KA+ A+  A+
Sbjct:    7 PDTPGAKRFGDLSGKEVKTVSASMTRFCEQYKRPILPQYRTIVNDLIQSTHLTLVDARFKYDAVFALGLHGIYFRLLKSYPGEGEAQTIFDALTNCLD--LESASIASDAESLSTWAKSASEADLVAALKGEGDSQLAS----IARAA------------KDDEFYLYSKMWGLGLIQMMEGAGIETTQEKVVELVEYVGFPVAKVKQDLVQYKDVLEKALQAEQLFKEIEIREKKKMAERLEEKAKRALAQAQ 242          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: A0A7S2W6W5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W6W5_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.580e-36
Identity = 91/263 (34.60%), Postives = 156/263 (59.32%), Query Frame = 2
Query:  299 YEQFIPDTPMTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEE----LLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAE 1075
            YE    +T   +K+GHL+GAKI+TVSE  A+F       V   ++ ++T+ + +THL V +ARFK D ++ +G  +S    ++ YP P QA+ I  A+ + +   +D  ++  +  ++++WA+GKT++DV+  +K +  S I      +A+              ++ ++++Y+R +G+G+  +MEN+G+E T +    ++E+W   +G S   A+ D + Y +   K+E  E + KEIEIREKKR+AERLE KA+ AI AAE
Sbjct:   54 YESGAANTEFAKKYGHLKGAKIRTVSEAFAEFTDIVGSPVNAVYKNMITDIVSTTHLMVSNARFKRDAVWSLGIVSSLNLLLKNYPEPEQAKQIKSALFECMF--MDEAEVLAEAKSIEDWAQGKTKDDVLAELKGEGSSPIAA----IAKAA------------KNDEFWMYSRFFGLGLVKVMENVGVEFTPDDVYPVMEQWLGTMGKSHFTASSDSDTYFKIRNKLELMETMMKEIEIREKKRMAERLENKAEMAILAAE 298          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: A0A7S4MGY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGY8_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.170e-32
Identity = 91/264 (34.47%), Postives = 150/264 (56.82%), Query Frame = 2
Query:  299 YEQFIPDTPMTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENI--GLEPTEE--LLEKWF-AVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAE 1075
            Y+    +T   RK+GHL+G  +KTV E   +F     + +   ++  V++ + +THL   +ARF+ DP++ +G  T+     + YP P   + I  A++K+IG  +D D++R +   + +WAEGKT+E+V   +K +  S +      VAR          + K +D  +++Y+R +GVG+  +ME +  G E  +   ++E+W  A +G S+  A  D +LY     K++  E++ KE+EIREKKR+AERLEAKA  AI  AE
Sbjct:   57 YQPGAANTEFARKYGHLQGRLVKTVGEAFEEFTAILGRPINALYKGAVSDIVGTTHLITVNARFQRDPVWSLGLLTAMDLITKNYPEPDVGQQIVSALMKSIG--MDEDELRAEAKVVSDWAEGKTKEEVAAALKGEGDSIVSA----VAR----------DAKADD--FWMYSRFFGVGLIRVMEIVAPGTEKDDAYTVMEQWVGASMGKSSFTACSDSDLYFRTKAKLDIMEVMMKEVEIREKKRMAERLEAKADAAIAQAE 302          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: A0A6U1AK03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AK03_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.680e-32
Identity = 86/238 (36.13%), Postives = 135/238 (56.72%), Query Frame = 2
Query:  362 IKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEP-TEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAA 1072
            +  VS  +  F   Y K ++  +R ++ + + +THLTV    F+Y+  FG+G  T +  F  +YP PG A+ IFDA++ ++   LDP  +  DT A+ EWA+GKTE  V+  I + + S I      V             EK      F+Y+R++ +GVF +M  +GL+  +E+ LE+WF+ +  +      D +L+   I ++  AE +FKEIEIREKK+LA+RLE KA+ A +AA
Sbjct:   61 VPPVSVAIQKFNELYSKPIIPMYRALINDLIVTTHLTVVRKDFQYNQFFGLGMQTIYESFFTSYPEPGAAKDIFDAILGSLN--LDPAVVAADTKAVLEWADGKTEAAVLASIDAPEGSAIAETMAAVKAN----------EK------FIYSRVFAIGVFKVMGKVGLDTISEDDLERWFSAMNITTGLIKSDYDLFNGSIERMRDAEQMFKEIEIREKKKLADRLEKKAKSAAEAA 280          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: A0A7S1XEQ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEQ4_9RHOD)

HSP 1 Score: 136 bits (342), Expect = 2.850e-32
Identity = 80/229 (34.93%), Postives = 124/229 (54.15%), Query Frame = 2
Query:  326 MTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNLYLEQIGKIEQAELLFKEIEIR 1012
            +  K+GHLRG  +KTV++ + DF   + + V + + +I+ E+L STHL    A F+YDP+FG GF  SF  F+  YP  G   L+FDA++KA+   LD  Q+R D  A++ W E  + ED V  +     +N V    +   T   P+ E          WF Y+R++G+G+F +ME +G++  +E L +W   +  S A    +   Y   I K++ AE LF E+  R
Sbjct:   24 LEEKYGHLRGRSVKTVADALRDFNDTFNRPVFSVYSSIINEFLASTHLARVCAAFRYDPIFGYGFTESFNDFLANYPNEGDRTLLFDAIIKALD--LDRQQIRDDAEAVRSWLESVSSEDEVFSLLDSPGNNKVAQALHYVATA--PYFE----------WF-YSRVFGIGLFKIMEKVGVKIDQEALRRWSEKLNISIAKLEDEWASYGSAIEKMKVAEQLFAEVTAR 237          
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Match: A0A7S4T5P1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T5P1_9STRA)

HSP 1 Score: 135 bits (340), Expect = 5.180e-32
Identity = 86/261 (32.95%), Postives = 150/261 (57.47%), Query Frame = 2
Query:  317 DTPMTRKFGHLRGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYDPLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTALKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGEDVDWFLYNRLWGVGVFTLMENIGLEPTEE----LLEKWFAVVGTSAAGAT----KDLNLYLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAE 1075
            DT   +++G + G KI+TV E  ++F     + +   +++IV++ + +THL   +ARF  DP++ +G  ++    ++ YP    A+ I  A+++++G  +D + +R+D   + EWA+GK+++DV + +K +  S +      VAR            KGE+  +++Y+R +G+G+  +ME +G+E   +    ++E+W   VG S    T     D +LY     K+E  E + KEIEIREKKR+AERLE KA+ A+K AE
Sbjct:   13 DTEFAKRYGSITGMKIRTVGEAFSEFTRILGQPINALYKSIVSDIVGTTHLITVNARFNRDPIWSLGILSAMDLVLKTYPEQDMAKKIVSAILESVG--IDEEDLRKDAQTVLEWAQGKSKDDVTQAMKGEGDSPLAD----VARAA----------KGEE--FWMYSRYFGIGLIKVMETVGVEMESDTAYSVMEEW---VGKSMEKPTFTACADSDLYFRTKNKLELMETMMKEIEIREKKRMAERLEEKAEMALKKAE 252          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1540.3133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX37_9PHAE2.340e-24393.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAS7_ECTSI3.330e-14598.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
H6WBA6_VAULI1.430e-4939.46Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A835ZGT7_9STRA1.290e-4840.71Thylakoid formation protein-domain-containing prot... [more]
A0A836CK23_9STRA1.120e-4638.98Thylakoid formation protein-domain-containing prot... [more]
A0A7S2W6W5_9STRA3.580e-3634.60Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4MGY8_9STRA2.170e-3234.47Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A6U1AK03_9STRA2.680e-3236.13Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XEQ4_9RHOD2.850e-3234.93Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S4T5P1_9STRA5.180e-3232.95Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1540contigE-siliculosus-1a_F_contig1540:20122..27467 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1128
Model size2118
Exons8
Ec32 orthologEc-27_006520.1
Ec32 ortholog descriptionPhotosystem II Psp29, biogenesis
Hectar predicted targeting categorychloroplast
Best eggNOG OGNA|NA|NA
Best tax levelBacillariophyta
COG Functional cat.S
EggNOG OGs2CHNN@1,2QUQV@2759,2XBZI@2836
EggNOG free text desc.Thylakoid formation protein
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006605,GO:0006612,GO:0006725,GO:0006778,GO:0006787,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009507,GO:0009526,GO:0009527,GO:0009528,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009657,GO:0009668,GO:0009707,GO:0009743,GO:0009756,GO:0009889,GO:0009941,GO:0009987,GO:0010027,GO:0010033,GO:0010119,GO:0010182,GO:0010207,GO:0010319,GO:0015031,GO:0015833,GO:0015979,GO:0015994,GO:0015996,GO:0016020,GO:0016043,GO:0017038,GO:0019222,GO:0019439,GO:0019684,GO:0019866,GO:0019867,GO:0022607,GO:0023052,GO:0031090,GO:0031323,GO:0031967,GO:0031968,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0033013,GO:0033015,GO:0033036,GO:0033365,GO:0034357,GO:0034613,GO:0034622,GO:0034641,GO:0042170,GO:0042221,GO:0042440,GO:0042651,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044270,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045036,GO:0045037,GO:0045038,GO:0045184,GO:0046149,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055035,GO:0055085,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070727,GO:0070887,GO:0071310,GO:0071322,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072596,GO:0072598,GO:0072657,GO:0080134,GO:0090150,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1902456,GO:1902458,GO:1903426,GO:2000070,GO:2000377
Preferred nameTHF1
Seed eggNOG ortholog2850.Phatr37959
Seed ortholog evalue5.4e-28
Seed ortholog score132.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1540.3133.1prot_E-siliculosus-1a_F_contig1540.3133.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1540 21063..27418 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928050.4380555-UTR-E-siliculosus-1a_F_contig1540:20121..210621622928050.4380555-UTR-E-siliculosus-1a_F_contig1540:20121..21062Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1540 20122..21062 -
1696318787.820147-UTR-E-siliculosus-1a_F_contig1540:20121..210621696318787.820147-UTR-E-siliculosus-1a_F_contig1540:20121..21062Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1540 20122..21062 -
1622928050.6471262-UTR-E-siliculosus-1a_F_contig1540:27418..274671622928050.6471262-UTR-E-siliculosus-1a_F_contig1540:27418..27467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1540 27419..27467 -
1696318787.9250247-UTR-E-siliculosus-1a_F_contig1540:27418..274671696318787.9250247-UTR-E-siliculosus-1a_F_contig1540:27418..27467Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1540 27419..27467 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928050.4572535-CDS-E-siliculosus-1a_F_contig1540:21062..212511622928050.4572535-CDS-E-siliculosus-1a_F_contig1540:21062..21251Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 21063..21251 -
1696318787.8402894-CDS-E-siliculosus-1a_F_contig1540:21062..212511696318787.8402894-CDS-E-siliculosus-1a_F_contig1540:21062..21251Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 21063..21251 -
1622928050.4702036-CDS-E-siliculosus-1a_F_contig1540:21778..218831622928050.4702036-CDS-E-siliculosus-1a_F_contig1540:21778..21883Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 21779..21883 -
1696318787.851275-CDS-E-siliculosus-1a_F_contig1540:21778..218831696318787.851275-CDS-E-siliculosus-1a_F_contig1540:21778..21883Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 21779..21883 -
1622928050.4846027-CDS-E-siliculosus-1a_F_contig1540:22448..226141622928050.4846027-CDS-E-siliculosus-1a_F_contig1540:22448..22614Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 22449..22614 -
1696318787.860929-CDS-E-siliculosus-1a_F_contig1540:22448..226141696318787.860929-CDS-E-siliculosus-1a_F_contig1540:22448..22614Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 22449..22614 -
1622928050.4989524-CDS-E-siliculosus-1a_F_contig1540:23102..232821622928050.4989524-CDS-E-siliculosus-1a_F_contig1540:23102..23282Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 23103..23282 -
1696318787.870974-CDS-E-siliculosus-1a_F_contig1540:23102..232821696318787.870974-CDS-E-siliculosus-1a_F_contig1540:23102..23282Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 23103..23282 -
1622928050.5184448-CDS-E-siliculosus-1a_F_contig1540:24084..242181622928050.5184448-CDS-E-siliculosus-1a_F_contig1540:24084..24218Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 24085..24218 -
1696318787.887375-CDS-E-siliculosus-1a_F_contig1540:24084..242181696318787.887375-CDS-E-siliculosus-1a_F_contig1540:24084..24218Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 24085..24218 -
1622928050.5444827-CDS-E-siliculosus-1a_F_contig1540:24798..249631622928050.5444827-CDS-E-siliculosus-1a_F_contig1540:24798..24963Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 24799..24963 -
1696318787.8993578-CDS-E-siliculosus-1a_F_contig1540:24798..249631696318787.8993578-CDS-E-siliculosus-1a_F_contig1540:24798..24963Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 24799..24963 -
1622928050.574176-CDS-E-siliculosus-1a_F_contig1540:26916..269981622928050.574176-CDS-E-siliculosus-1a_F_contig1540:26916..26998Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 26917..26998 -
1696318787.908155-CDS-E-siliculosus-1a_F_contig1540:26916..269981696318787.908155-CDS-E-siliculosus-1a_F_contig1540:26916..26998Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 26917..26998 -
1622928050.6241908-CDS-E-siliculosus-1a_F_contig1540:27311..274181622928050.6241908-CDS-E-siliculosus-1a_F_contig1540:27311..27418Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 27312..27418 -
1696318787.9171453-CDS-E-siliculosus-1a_F_contig1540:27311..274181696318787.9171453-CDS-E-siliculosus-1a_F_contig1540:27311..27418Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1540 27312..27418 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1540.3133.1

>prot_E-siliculosus-1a_F_contig1540.3133.1 ID=prot_E-siliculosus-1a_F_contig1540.3133.1|Name=mRNA_E-siliculosus-1a_F_contig1540.3133.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=376bp
MKQTSFLCLSGLAGSLAFVPSTNVVPSSAWTSRSGGSTNPAADAGSRRGI
PVCMAATQPKPGPEVMGLNLGKPAPVETPEDYVYEQFIPDTPMTRKFGHL
RGAKIKTVSETVADFYIYYKKVVLTQFRTIVTEYLQSTHLTVYDARFKYD
PLFGVGFYTSFMRFMRAYPVPGQAELIFDAVVKAIGNGLDPDQMRQDTTA
LKEWAEGKTEEDVVEMIKSDDRSNIVTDGFYVARTGLGPFGEGWEEKGED
VDWFLYNRLWGVGVFTLMENIGLEPTEELLEKWFAVVGTSAAGATKDLNL
YLEQIGKIEQAELLFKEIEIREKKRLAERLEAKAQDAIKAAERAEKEAKE
DAEEEERIKNAKEGDVLPNDLPKEN*
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mRNA from alignment at E-siliculosus-1a_F_contig1540:20122..27467-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1540.3133.1 ID=mRNA_E-siliculosus-1a_F_contig1540.3133.1|Name=mRNA_E-siliculosus-1a_F_contig1540.3133.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7346bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1540:20122..27467- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCAACACACATTTCGCGCCGGTGCCTTACAGCTCGACACAGCCAGGACTA TGAAGCAGACCTCTTTCTTGTGCCTGTCTGGCCTGGCAGGATCGCTGGCT TTCGTACCTTCCACCAACGTTGTCCCGAGCAGCGCATGGACGAGCCGGTC AGGCGGGTGAGACGAGACTTCAGCGTAGGCGGAAACATTTCACACTCGCT CGATTCCGGCTCACAGCTGGTGCCGTGGAAAAATTCCCGCGCTGTTCACG CAACCATGACACCCTTGGGGAGGAACAGCACCCGCGAACGGCTGTTGCAG AGTCGCTGCTCAGCGGCGCGAAGCAGTTGGTTGTTTTTGCCTGAAAGTAA AGTTTACAGAGACACGGCTAGCTGCTGGTGTCTGTCGCGATCCTGGCCGA AAGGTATGTATGTACCTCATGACGTCCGCTGTGCCCTGACTCCTCTTGCG TGCGTCGTGGCGCGTGCAGCTCGACCAACCCGGCCGCGGATGCCGGATCA AGGCGAGGGATCCCGGTGTGCATGGCGGCGACACAACCGAAGCCCGGCCC GGTGAGGGCGCCTCGCATGCGTTTCGTCTGAGAGAGAAGTAGGAAACTAG AGAGCACGGTGTGACTCATGACCCAGCTGACGTTTGTGTCGGTCCACCCT AAATAATCCGGCGGGGCGATCATATCGCTACTGCTGAGCTTCTGCCACCG ACTGATGGTCGCGTGGCCCATCAAACACGCGAAGAAGCAAGACTACATCT TCATCCTTAGGAAGTCTGTTGAAGAACACGTACAAGGTTGGTGAATTGTG GGTGGACCTGATGTCTGTTGCCCGCTGCTGTGAAGCGAAAAAGTCTCTTC ACCCATCCATGCGATACAATGTAGGTTACGTACGTCTTCAGTATTCAAGG AAATCGACCAGATACATCTGCATACGGCAGCAACAGCAGTGTAGTGAAAC ACACACCCGCTTCGACTTGCGGTCCTGCTGTTTTCCGTCTTCGATGGGGC ATGCTTTGCTGCTGTTGATGCCGTGTTGAGCCTAGCGGCTCAGAGAGTCA GACGCCTTACTGCTGTAACTGACCACGTGAACACACATGGCGAGCAAGAC AACGTTGACCACGATCACGATTGGAAACACACCGCAGCGGAAGCTTTACG AAGCTGGCACGAAGAATAAGTACGTGTCATATTCTGCTTTGAAATACTTC GAAGAAATAGCGGCTGCTTTCATGGTTGGCTACGCCGCTTGTTTGGATAG GCGGTATTTGCAGCGTTTTGTTGCAAGGGCCACAGGTGTAGCAAGGCCAG GTATTGCCTTCCTTTGCAGAGTGTCTAATGCTGTAGTGGTACACGCCAAT AACGCCAATAGCAATGGTGACGCTTCGCAAAGCAGCAGCAGTGGCACCCA CCAGCGTACCGTCATCACACCCGGGGACCGGACTCCACAATCTTAATTAA TATTTTACTTGCGTGCCAGTACACACGTACTCTCGATGAGCACAGGCGTT GCGGTGGTCAAGTATGCGCAATTCGAGAGCATGATCAATTTGAGTAAGAT AAACATGTTCGAATCAGCAAGCATGTTTCCACCGCAGTCAGCAATGCGCA AGCTAGGGCTGGGATTTGGTCTATAGCCGCGATATGACGTCCGTGCCCCA AGTTTTGCTTGTCGATTTTGTGGCGAACACCTCGTCCGCAGCCCAGCTGA TAGTATCTGTACGTGCCATTTGCTGTAGATTCGCGGGAGATTGGTCTAGG TCCGTAGGCTACGAGCTCGTGCCTGACTCTTGAGGACCCACGCCCCCACA CATCGCTAGCCGAACACGACACAGTCACCATGCATGGCGTACGCTTGGAG CCGTGTAGCAGTATAACACAAGATAACACCCCCCCGGTGATAACATAGAC TTGTGGGCTCCTGAAAACACCAAGTGTTACTTGTATTGTGTCAGGTGTTG TGGTGTCTTTTGTCGCCCAATTCTTGATGTGAACGTATTTTGGGCTCATG CTGACCCGTAGCAATTCTGCCGACGGGTGTGGTTTTGTGTGGCGAGGTGT TATCTCGTGTGGGTGTGTTCCTTTGTCCCGCGTACGGCGGCAACAGCTAC TGCTGTTGGAGAAGCTTGGAAGGCGGGGACAACACTTCCGGCAGTATACT GCTGTACAATAAATACCCTTTTTTTCCCCACCGTGTCGAACATCAGCAGC AGCAGCAGCACGCCGGCGTGGAAAGATGCTCACTACGGAAGTACGTGCGA TCGGTATTCTATGAAAAGCAGTTGGTGCCAACCCGATACGTTTAGACCTA CCTGCCTGTTCCTGGAGCGAACAGATAACGATGCGTTAAAATGCTTTGAG ATGTGTTTGGGATGTTGACTTTTCCACGCGGGCTTGAGACCCGGGTCGTG TCGTCCATCGGCGCTAGCTTTCGAACGTTCATCTCATGTTGTTTGTACCC CACCAAACGATACTAACATCACTCGATTCCACCTCCCCCCCGGTGACCCC GCAGGAGGTGATGGGCCTTAACCTGGGAAAGCCTGCCCCAGTAGAAACCC CGGAAGACTACGTTTACGAGCAGTTCATCCCGGACACGCCCATGACGAGG AAGTTCGGACACCTCCGCGGCGCTAAGATCAAGACCGTTTCGGAGACCGT CGCTGACTTTTACATCTACGTGAGTGATAGTGTGCTGCTCCGCGAAGAAG CTGCTGTACACTGAGCGCTACGGTGACGCCGCCTTGGAGATGTTGCACAA AGTAGTGTTGCTTGCGGTGTCGCCTTGGAGGGAGGAGACTTTGGCGGAAT ACGTGTGGGAGTGCACCCCGAAACGAGCGCCTGGCAGTTGACATGAGCAA TTTTGTTGCTGTTTTGTGATGTGTGGCTTGTGTTGTACAGCAGCAGCAGC ACCATGCGAGGTTAGCAACGATTGCGGTTAGCGGAAAGCCTCACGTTTCC GTTCGTTGTAATGCTAGTGGGCGGGGTTGCCACCTGCAGGTATCACTTAT ACAGCAGCGCCTCATTGAAGCTACTTCTTCTGTCCTTGCTTGGTACGTTA GTTTCGGCGATCGAGGGTAGAAGGCGATCATCCAGTCTCTATTTTGTGTG TTGGAACACAAGTCGAACAAAGTGATCCGTTAACGTGGAATTTATTCCAT CAGCATGTCTTCTATCCTTTACCTCTGTTCTAATAATAGTCGTCGTATGC TGCTGCTGCTGTTGTTCTCTCTCTCTCTCTCTCTCTCTCTTTTCAACAGT ACAAGAAGGTCGTCCTCACGCAGTTCCGTACGATCGTGACCGAGTACCTC CAGAGCACTCACTTGACCGTGTACGATGCGCGGTTCAAGTACGACCCGTT GTTCGGCGTCGGTTTCTACACGAGCTTCATGAGGTAACTGGCTGACTGAC CGACCGACCCAGCTTTTTCTGACAGCAAGAGTTGACCACTTGGAAGATAG ATCGCCTACGCGAGTTGGGCCGTAGTGGGGATGGATGTGAGTATACGTGT TCGTTCACGACGAGATTTCGAGGACGCCAGCCAGAACTACCTTACTTTGT TGAGAATTTTTTTTTCAGTTCCCCCGCCTGCTTCAGGGGGATGAATGCTC ATTTTTCAACACCCGAATCACGGAGGAATCGAAGAGAGCACCTGAAAAAT GGCATGGCCTCATGGGACACAAAGTGCCCACGTTTTTTTGTTGGCGAATA TTTCGTTTTTGATGAAAAAGTTGAGGCCTGTCCGCGTGAGGTTGATGAAC TGATTTACTGGGATATAGTGGCACCCAAAATGCCATCATTGGTACTACCA TGGTGCGTGGTGTGTGCGTATTGCGGTTATCCATGCATGTTACAGCCACG GCACCGGCCCCAACCAGCCTCTCTTGTCATTTTCTCTTGTCATATTTTTG TCGCGACATACCTCGTACCGAATTGTCCGTTTCAATTCCCTTCCCAGCTT CCGGACCTTGTCTGACGGTCCCCGGCCACTATAGCATAACACTGGTATTT ACTGTTGACAACCACTGCTGCCATCTGCTCACATTCCGTATCCGATCGCA CCCCCCAAGTTCATGCGCGCCACTGCCCCCTCCTACTGCTGTGTGTTTCC GGTTGATGTTCACTGCTGTCATCTGTTTGATCTCGGGCTTGCGACCTCAC GTGCCATCGAAATTTTCTCCACACGCGGCCCGCAGGTTCATGCGCGCCTA CCCGGTACCGGGGCAGGCAGAGCTAATCTTCGACGCTGTTGTGAAGGCGA TCGGGAACGGGCTCGACCCCGACCAGATGAGGCAGGACACGACCGCCCTC AAGGAGTGGGCCGAGGGGAAGACCGAGGAAGACGTGGTGGAGATGATCAA GTCGGACGACAGGAGGTGGGCAAGTTGATTGTTCGAGCGTCTCGTTGCAG AAAGATGTCGCCGGAAGACTGGAGCCGGCGACTCGGTAGTAATCTCGAAC CCCTACCCAAGCAAGCTTGATAGGTGTGCTTTTAGTATTGTTTGTGTCTG GGGTGGTTTGACAACATTCTCACGAAACGATGGACACGAAGGAGATAGCG TAGAGCAGTAGCTGTTGGTTGGTTCTTTCTTAATAGCACGGCTGTTCCCG AAACACGCGTTATCTCCGATCAACGTCTAAAGCTTCCCATGCCTATGTAC CGATATCGGACGAGAACATCGCTTCTTTTTTATCTCTCCCTTTCTCGCTC TGAATCTGCACCTTCTGTGACATGTCGGCTTGGCCAAGCGCAGCATCATG GCTCGCGAACATGTTGATCGATTACGCTCTTTGACCATCTCTCTCTCTCT CTCTCTGAATCGGCACCTTCTGCGGCATGTTCGCTTGACCTACTGTATCA CAGCAACATCGTCACCGACGGATTCTACGTGGCGCGCACGGGCCTGGGTC CGTTCGGAGAGGGGTGGGAGGAGAAGGGCGAGGACGTGGACTGGTTCCTG TACAACCGGTTGTGGGGAGTGGGTGTGTTCACCCTCATGGAGAACATTGG CCTTGAGCCGACGGAGGAGGTGGGTGTCTCTCTCTAGCGGGGTCATGGCA GGCGTGTCTCAAGTTGACCTTGCGACGGAAGAGCTGTGTCGGTGAATCAT GAGTGCCTCACCTCACTCTCTTACAGCGGCTTCCTGCTGCCCCAAGCACG GTACATGGCTTTGACGTTAGTCCTGTCGTGCTACGCCCGTCACCGCGGGT TCGCGACCCAGCACTCGTTAACGTCGCCGTTGTTGCAGCCATGGTATTTT TCGGCCTGCGCGTAGAAAGCAACGTGTTCAGATGTTGTCCGATATATTAA ATCGCCACTACTGTATTTTCGTGCTACAGCGTCGGTCCGCGATGATCGTG TGTGCGTGTGGTGTACGGTAGTGGGAATCCTTTAACAACATGCGTGTTGC AAATATGTACCGTCGCCATGGTCGTGTGAAGCCACAGCTGCGATGATGAC AAACCGCCCCGCTGAGTATCCCATGCCTGCGTACTTCCACCAGGCTAACA TTTTTTGTTTCGAGCATTTTCGGTCGTGTCTTCTTTCCTGTTGGTGACGG CAATCGCCGCTTTTTCCCCCTTCTTTTTTGTCAGCTCTTGGAGAAGTGGT TCGCCGTAGTGGGGACATCAGCCGCGGGCGCAACAAAGGACTTGAACCTT TACTTGGAGCAGATCGGGAAGATCGAGCAGGCGGAGCTGGTGCGTTCACG TCGACCGATCCGACAAACACCACAGCAGAGTGGGGTCAGCGTTCGCACGA GGATGCCGTGTTGTCGTGATATTTTTCTACATTCGTCTTATTCGTCATTA GTTTTGTCTTGGTCGTGTGCCGTGGCTTAATTATTCCCTGCGTTTTTTGT GCGTCAGCTTCGTTGGCCTGTTCTATCTGGCACAATTTGTGCTCCTGGTT TGCGACCAGCCTGCTGGCCGTCTGGAGTATCGAAAAAGCTCTGTGTTGAG TTGTGCCGGATGCTCTGTCCTCACCCCAAGTGCTTTGACAGAGTGTACAT GAGTACCGGTATACTCGTAGGGAACGAGAGGCCGTATGAAAAATCAGAGC TAAGACTTGGAAATGTCGAGAAAAGTGCCCAGCTTCATTGCCGAGTATAT CAGAGTTAATACTCGGCCTTTTTTAAAAGAAGCTTGATCTTCGTGACCGC ACCGGCATTGCTGTCGCACCTATAACCCGCCCGCTGAATCCCTCTCGTCT TCGTCGCATTTGTCAGCTGTTCAAGGAGATCGAGATCCGGGAGAAGAAGC GCCTCGCCGAGCGCCTGGAGGCCAAGGCGCAGGACGCCATCAAGGCGGCC GAGAGGGCAGAAAAGGAGGCCAAGGAAGACGCGGAGGAGGAGGAGCGGAT CAAGAACGCCAAGGAAGGGGACGTCTTGCCCAACGACCTCCCCAAGGAGA ATTAAGTCGTCACGTACCTCTAGAGTCCGCTTTTTTTCTATTTCCGCTGC TGCTGCTGCTGCTGCTGCTGCTGATGCTGGTGCTGATATCAGTGATGGAT CATGATGTCGTAGAAGAAGCAGGTTCGTTCTTGTCCCTGTTTTTTGTTCC TCCTCGGGGTGTGCACGTGGCCACCGCTAGTAGCCTTGTTTGGTTGTTTT CTGTGGATGATGTGGTTTTTGTCTTCTTTGATGTGTCCCTCACACCCTTT AGTGTGTTGCCTGGTCTCTTGCGCTTTGCCACGGGCAGGCTGATTGAGGC CCGTACACTCACCTGAAAAGCTCGTTCCTTCCCAATTCCTACTCTCATGA ACGACTAGCACGAGATATGCGGAAGAGGACGGGCGGGTTGATGCATGGAT TGAGTTTGCACCAAGAGTAGGCATACCGTTGGCTCTTCCTAGAGTTTGTG GGCATATGATGCCGCCCGTGTTTCGCGTCGAGAATAGGGATCAACCCAAC CATTGTGGCAGCTGAAGGTTGGGAGGGCTGCCTACAACATGGCGGTCCGT CTTAGTACAGTCGTGGCTCGGATAAGAGCGTACCTTACAAGAGGGGGCTC CGATATATGAGGGTCGGAAGCGGCTGTCAAGGACTCGACCCTCTATAGTA GAAGTCGAGTACTCTGTTATTCCGGTATAAGAGGGGGCTCCGATGTAAGA GGGTTGAGGAGCCACGACTGTACGTGGATATCTAACGCGCGTCAGGATAA CTAGGTGAGGGTCTACGGTGTTGTCCCTACATATCTACCTCACAAATACA CGTGGGGAAAGAAGTGCCGAGAGGTCCTCTGTAGCGAGGTGATTTACCGT AAAATGGTGGCTTGACACGGCCCTGGGTGATTTTGTTTGACCAATAAGGC GTTATGCCTGGTTTCCGGCGGAAGTGGTCCGGGAAGTCTGGGGGGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1540:20122..27467-

>mRNA_E-siliculosus-1a_F_contig1540.3133.1 ID=mRNA_E-siliculosus-1a_F_contig1540.3133.1|Name=mRNA_E-siliculosus-1a_F_contig1540.3133.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2256bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1540:20122..27467- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGCAGACCTCTTTCTTGTGCCTGTCTGGCCTGGCAGGATCGCTGGC
TTTCGTACCTTCCACCAACGTTGTCCCGAGCAGCGCATGGACGAGCCGGT
CAGGCGGATGAAGCAGACCTCTTTCTTGTGCCTGTCTGGCCTGGCAGGAT
CGCTGGCTTTCGTACCTTCCACCAACGTTGTCCCGAGCAGCGCATGGACG
AGCCGGTCAGGCGGCTCGACCAACCCGGCCGCGGATGCCGGATCAAGGCG
AGGGATCCCGGTGTGCATGGCGGCGACACAACCGAAGCCCGGCCCGCTCG
ACCAACCCGGCCGCGGATGCCGGATCAAGGCGAGGGATCCCGGTGTGCAT
GGCGGCGACACAACCGAAGCCCGGCCCGGAGGTGATGGGCCTTAACCTGG
GAAAGCCTGCCCCAGTAGAAACCCCGGAAGACTACGTTTACGAGCAGTTC
ATCCCGGACACGCCCATGACGAGGAAGTTCGGACACCTCCGCGGCGCTAA
GATCAAGACCGTTTCGGAGACCGTCGCTGACTTTTACATCTACGAGGTGA
TGGGCCTTAACCTGGGAAAGCCTGCCCCAGTAGAAACCCCGGAAGACTAC
GTTTACGAGCAGTTCATCCCGGACACGCCCATGACGAGGAAGTTCGGACA
CCTCCGCGGCGCTAAGATCAAGACCGTTTCGGAGACCGTCGCTGACTTTT
ACATCTACTACAAGAAGGTCGTCCTCACGCAGTTCCGTACGATCGTGACC
GAGTACCTCCAGAGCACTCACTTGACCGTGTACGATGCGCGGTTCAAGTA
CGACCCGTTGTTCGGCGTCGGTTTCTACACGAGCTTCATGAGTACAAGAA
GGTCGTCCTCACGCAGTTCCGTACGATCGTGACCGAGTACCTCCAGAGCA
CTCACTTGACCGTGTACGATGCGCGGTTCAAGTACGACCCGTTGTTCGGC
GTCGGTTTCTACACGAGCTTCATGAGGTTCATGCGCGCCTACCCGGTACC
GGGGCAGGCAGAGCTAATCTTCGACGCTGTTGTGAAGGCGATCGGGAACG
GGCTCGACCCCGACCAGATGAGGCAGGACACGACCGCCCTCAAGGAGTGG
GCCGAGGGGAAGACCGAGGAAGACGTGGTGGAGATGATCAAGTCGGACGA
CAGGAGGTTCATGCGCGCCTACCCGGTACCGGGGCAGGCAGAGCTAATCT
TCGACGCTGTTGTGAAGGCGATCGGGAACGGGCTCGACCCCGACCAGATG
AGGCAGGACACGACCGCCCTCAAGGAGTGGGCCGAGGGGAAGACCGAGGA
AGACGTGGTGGAGATGATCAAGTCGGACGACAGGAGCAACATCGTCACCG
ACGGATTCTACGTGGCGCGCACGGGCCTGGGTCCGTTCGGAGAGGGGTGG
GAGGAGAAGGGCGAGGACGTGGACTGGTTCCTGTACAACCGGTTGTGGGG
AGTGGGTGTGTTCACCCTCATGGAGAACATTGGCCTTGAGCCGACGGAGG
AGCAACATCGTCACCGACGGATTCTACGTGGCGCGCACGGGCCTGGGTCC
GTTCGGAGAGGGGTGGGAGGAGAAGGGCGAGGACGTGGACTGGTTCCTGT
ACAACCGGTTGTGGGGAGTGGGTGTGTTCACCCTCATGGAGAACATTGGC
CTTGAGCCGACGGAGGAGCTCTTGGAGAAGTGGTTCGCCGTAGTGGGGAC
ATCAGCCGCGGGCGCAACAAAGGACTTGAACCTTTACTTGGAGCAGATCG
GGAAGATCGAGCAGGCGGAGCTGCTCTTGGAGAAGTGGTTCGCCGTAGTG
GGGACATCAGCCGCGGGCGCAACAAAGGACTTGAACCTTTACTTGGAGCA
GATCGGGAAGATCGAGCAGGCGGAGCTGCTGTTCAAGGAGATCGAGATCC
GGGAGAAGAAGCGCCTCGCCGAGCGCCTGGAGGCCAAGGCGCAGGACGCC
ATCAAGGCGGCCGAGAGGGCAGAAAAGGAGGCCAAGGAAGACGCGGAGGA
GGAGGAGCGGATCAAGAACGCCAAGGAAGGGGACGTCTTGCCCAACGACC
TCCCCAAGGAGAATTAACTGTTCAAGGAGATCGAGATCCGGGAGAAGAAG
CGCCTCGCCGAGCGCCTGGAGGCCAAGGCGCAGGACGCCATCAAGGCGGC
CGAGAGGGCAGAAAAGGAGGCCAAGGAAGACGCGGAGGAGGAGGAGCGGA
TCAAGAACGCCAAGGAAGGGGACGTCTTGCCCAACGACCTCCCCAAGGAG
AATTAA
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