mRNA_E-siliculosus-1a_F_contig15379.3108.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15379.3108.1
Unique NamemRNA_E-siliculosus-1a_F_contig15379.3108.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A0P7AYI8_9FLAO (Glycosyl hydrolase, family 88 n=6 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A0P7AYI8_9FLAO)

HSP 1 Score: 600 bits (1547), Expect = 2.410e-215
Identity = 279/320 (87.19%), Postives = 298/320 (93.12%), Query Frame = 1
Query:    1 MKRTHQLVSKSVLLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            MKRT + + KSV LF + CLG+ AQ  ++KE IE AMVSAMEWQEAHPIFALAPTDWTNGAYYVGVT+AH+ TKNPIFLAALKT GYRNEWKPLYRTYHADDVAISY+YLYAN+TRKNLVDLGPTKAFLDTHLYEPNKWKDGTD NKEKKILWWWCDA FMAPPVIT YAKQTGE+KYLDAMHK YMETYNLLYDK+E LFARDTRYQWGVN KDLKEPNGKKIFWARGNGWVL GLALVLTDLP+DY+H+DFYVNLYKE+AA+IK++Q EDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEY PAVKK
Sbjct:    1 MKRTPKTMYKSVFLFLL-CLGVKAQMTLDKEKIEHAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTKAHEATKNPIFLAALKTQGYRNEWKPLYRTYHADDVAISYSYLYANATRKNLVDLGPTKAFLDTHLYEPNKWKDGTDPNKEKKILWWWCDALFMAPPVITVYAKQTGEEKYLDAMHKYYMETYNLLYDKKEQLFARDTRYQWGVNAKDLKEPNGKKIFWARGNGWVLGGLALVLTDLPQDYEHRDFYVNLYKEMAAKIKDLQQEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYAPAVKK 319          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A3S9NT83_9FLAO (Glycoside hydrolase family 88 protein n=2 Tax=Maribacter sp. MJ134 TaxID=2496865 RepID=A0A3S9NT83_9FLAO)

HSP 1 Score: 585 bits (1508), Expect = 1.960e-209
Identity = 269/313 (85.94%), Postives = 287/313 (91.69%), Query Frame = 1
Query:   22 VSKSVLLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            + + +L+  V     N    ++ + IE AMV AMEWQEAHPIFALAPTDWTNGAYYVGV +AH+TTKNPIFLAALKT GYRN WKPLYRTYHADDVAISY+YLYANSTRKNLVDLGPTK FLDTHLYEPNKWKDGTDKNKEKKILWWWCDA FMAPPVITEYAKQTGEQKYLDAMHK YMETYNLL+DKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVL GLALVLTDLP+DY+H++FYVNLYKE+AARIKE+QHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDK EYGP+ KK
Sbjct:    4 MKRLLLILLVFATTKNMGQQMDNKAIETAMVKAMEWQEAHPIFALAPTDWTNGAYYVGVAKAHETTKNPIFLAALKTQGYRNHWKPLYRTYHADDVAISYSYLYANSTRKNLVDLGPTKEFLDTHLYEPNKWKDGTDKNKEKKILWWWCDALFMAPPVITEYAKQTGEQKYLDAMHKYYMETYNLLFDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLGGLALVLTDLPKDYEHREFYVNLYKEMAARIKELQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKDEYGPSAKK 316          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A4R7K7U7_9FLAO (Rhamnogalacturonyl hydrolase YesR n=1 Tax=Maribacter spongiicola TaxID=1206753 RepID=A0A4R7K7U7_9FLAO)

HSP 1 Score: 551 bits (1421), Expect = 4.320e-196
Identity = 251/320 (78.44%), Postives = 286/320 (89.38%), Query Frame = 1
Query:    4 KRTHQLVSKSVLLF-FVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            K+  +++  +V+L  F   +   AQ  ++  NIE+AM+ A+EWQEAHPIFALAPTDWTNGAYY+GVTRAHQTTKNPIFLAALKTMGY N+WKPLYRT+HADD+AISY YLYANSTRKNLVDL PTK FLDTHL+EPN+W +G++KN E+KILWWWCDA FMAPPVIT Y KQTGEQKYLDAMHK YMETYNLLYDKEE LFARDTRYQWGVN+KDLKEPNGKKIFWARGNGWVL GLAL+L+D+PEDY+H++FYVNLYK++AARIK +Q EDGLWRTSLLSPES+NHGEVSASGFYTFAL WG+NNGLL+KAEY PAV K
Sbjct:    4 KQIRKIIHTTVILLSFFYGVKTQAQKQVDNSNIEQAMIKALEWQEAHPIFALAPTDWTNGAYYIGVTRAHQTTKNPIFLAALKTMGYTNDWKPLYRTHHADDIAISYTYLYANSTRKNLVDLAPTKEFLDTHLFEPNEWNNGSEKNAEQKILWWWCDALFMAPPVITLYTKQTGEQKYLDAMHKYYMETYNLLYDKEEQLFARDTRYQWGVNKKDLKEPNGKKIFWARGNGWVLGGLALILSDMPEDYEHRNFYVNLYKKMAARIKGLQQEDGLWRTSLLSPESFNHGEVSASGFYTFALTWGINNGLLNKAEYTPAVTK 323          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A0Q0XQA2_9FLAO (Uncharacterized protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A0Q0XQA2_9FLAO)

HSP 1 Score: 536 bits (1381), Expect = 5.310e-190
Identity = 250/320 (78.12%), Postives = 280/320 (87.50%), Query Frame = 1
Query:    4 KRTHQLVSKSV-LLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            K + +L  K + L+ F+AC  L AQN ++K  IEKAMV A+EWQEAHPIFALAPTDWTNGAYYVGV++AHQ TKNPIFLAALKTMGY NEWKPLYRTYHADDVAISY YLYAN+TRKNLVDLGPTK FLDTHLYEPN WKDGTDK          CDA FMAPPVIT YAKQTGEQKYLDAMHK YMETY+LLYDKEE LFARDTR+QWGVN++DLKEPNGKKIFWARGNGWVLSGLAL+LTDLP++Y+H DFY+NLYKE+A+RI  +Q +DGLWRTSLLSPES++HGEVSASGFYT+ALAWGVNNG+LD+ +Y P VKK
Sbjct:    4 KLSQKLQRKGIALILFLACSNLFAQNTLDKVQIEKAMVKALEWQEAHPIFALAPTDWTNGAYYVGVSKAHQATKNPIFLAALKTMGYYNEWKPLYRTYHADDVAISYMYLYANATRKNLVDLGPTKVFLDTHLYEPNSWKDGTDKKXXXXXXXXXCDALFMAPPVITVYAKQTGEQKYLDAMHKYYMETYDLLYDKEEKLFARDTRFQWGVNDEDLKEPNGKKIFWARGNGWVLSGLALILTDLPKEYEHYDFYLNLYKEMASRIASLQQDDGLWRTSLLSPESFDHGEVSASGFYTYALAWGVNNGILDETKYTPEVKK 323          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A6I2MPR1_9FLAO (Glycoside hydrolase family 88 protein n=2 Tax=Maribacter luteus TaxID=2594478 RepID=A0A6I2MPR1_9FLAO)

HSP 1 Score: 529 bits (1362), Expect = 1.010e-187
Identity = 240/284 (84.51%), Postives = 263/284 (92.61%), Query Frame = 1
Query:  109 MVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            MV AMEWQEAHPIFALAPTDWTNGAYYVGV+RAHQ TKNPIFLAALKTMGYRN+WKPLYRTYHADDVAISY YLYANSTR+NLVDL PTK FLD HL+E N WKDGTDK+ EKKILWWWCDA FMAPPVI EYAKQTGEQKYLDAMH  Y +TY+LLYD+EEHLFARDTR+QWGVNEKDLKE NGKKIFWARGNGWVL GLAL+L+D+PEDYK++DFYV+LYKE+AARIK +Q  DGLWRTSLLSPES++HGEVSASGFYTFALAWG+NNG+L+KAEY P+V K
Sbjct:    1 MVKAMEWQEAHPIFALAPTDWTNGAYYVGVSRAHQATKNPIFLAALKTMGYRNDWKPLYRTYHADDVAISYTYLYANSTRRNLVDLAPTKEFLDIHLFETNPWKDGTDKHAEKKILWWWCDALFMAPPVIVEYAKQTGEQKYLDAMHTYYKQTYDLLYDEEEHLFARDTRFQWGVNEKDLKEENGKKIFWARGNGWVLGGLALILSDMPEDYKNRDFYVDLYKEMAARIKSLQQADGLWRTSLLSPESFDHGEVSASGFYTFALAWGINNGILEKAEYTPSVTK 284          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A7Y3HSV6_9FLAO (Glycoside hydrolase family 88 protein n=1 Tax=Croceitalea sp. TaxID=1912138 RepID=A0A7Y3HSV6_9FLAO)

HSP 1 Score: 505 bits (1300), Expect = 7.610e-178
Identity = 230/309 (74.43%), Postives = 266/309 (86.08%), Query Frame = 1
Query:   34 VLLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            VL+ F+    ++ Q   +K  IE AMVSAMEWQEAHPI+ALAPTDWTNGAYYVGVT+AHQ TKNPIFLAALK MGYRNEWKPLYR YHADD+ ISY+YLY N+TRKNLVDL PT  F++ HL+EPNKWK+ +D++K +KILWWWCDA FMAPPV+TEYA  T ++KYLDAMHK YMETYNLLYDKEEHLFARDTR+QW  NE DLKE NGKKIFW+RGNGWVL GLALVL  +P++Y+H+ FY+NLYKE+AA+IK IQ +DGLW TSLLSPES++HGEVS SGFYTFAL WG+NNG+LDKAEY P VKK
Sbjct:    5 VLVSFLYSFTVSGQQ-FDKARIEAAMVSAMEWQEAHPIYALAPTDWTNGAYYVGVTKAHQATKNPIFLAALKIMGYRNEWKPLYRRYHADDITISYSYLYINTTRKNLVDLKPTHDFIEEHLFEPNKWKNVSDEDKTEKILWWWCDALFMAPPVLTEYANHTNDRKYLDAMHKYYMETYNLLYDKEEHLFARDTRFQWRGNEDDLKEENGKKIFWSRGNGWVLGGLALVLDAMPKEYEHRSFYLNLYKEMAAKIKSIQQKDGLWTTSLLSPESYDHGEVSGSGFYTFALTWGINNGVLDKAEYAPVVKK 312          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A5B7SZS7_9FLAO (Glycoside hydrolase family 88 protein n=2 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SZS7_9FLAO)

HSP 1 Score: 493 bits (1268), Expect = 8.050e-173
Identity = 231/322 (71.74%), Postives = 258/322 (80.12%), Query Frame = 1
Query:    1 MKRTHQLVSKSVLLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYA--NSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            MK+ +   +  +LL  +     NAQ   N   IEKAM+ AMEWQE HPIFA++PTDWTNGAY +G+TRA+  TKN IFLAALK +GYRN W    R YHADDV +SY YLY   N TRKN VDL PT  FL+ HL+EPN WK+GTDK K KKILWWWCDA FMAPPVIT YAK TG+ KYLDAMH  YMETYNLLYDKEE LFARD  YQWGVNEKDLKE NGKKIFW+RGNGWVL GLAL+L D+PEDYKH+ FYV+LYKE+A RIKE+Q EDGLWRTSLLSPES++HGEVS SGFYTFALAWGVNNGLLDKAEY PA+ K
Sbjct:    1 MKKINPFKTCLMLLCILGASIGNAQQMANNSEIEKAMIRAMEWQEDHPIFAVSPTDWTNGAYQIGITRAYDATKNQIFLAALKNLGYRNNWNTHDRFYHADDVTVSYGYLYLELNDTRKNYVDLKPTTTFLNAHLFEPNPWKEGTDKQKFKKILWWWCDALFMAPPVITLYAKHTGDMKYLDAMHDYYMETYNLLYDKEERLFARDMNYQWGVNEKDLKEENGKKIFWSRGNGWVLGGLALILNDMPEDYKHRKFYVDLYKEMAKRIKELQPEDGLWRTSLLSPESFDHGEVSGSGFYTFALAWGVNNGLLDKAEYTPAITK 322          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A5S3Q5L7_9FLAO (Glycoside hydrolase family 88 protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3Q5L7_9FLAO)

HSP 1 Score: 478 bits (1229), Expect = 7.390e-167
Identity = 218/312 (69.87%), Postives = 253/312 (81.09%), Query Frame = 1
Query:   31 SVLLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYA--NSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            ++ L  + C+   +    N + IEKAMV AMEWQEAHPIFA+APTDWTNGAY VG+ RAH+TT+N IFLAALK  GYRN+W    R +HADDV +SY YLY   N TRKN VDL PT+ F+  HLYEPNKW+DGTDK+  K ILWWWCDA FMAPP++T YA  TGE  +LD MHK YMETYNLLY+KEEHLFARDTRYQW  N  DLKE NGKKIFW+RGNGWVL GLAL+L D+P+DYKH+DFY+NLYKE+AA+IK IQ EDGLWRTSLLSPES++HGEVS SGFYTFALAWG+NNG+LDK+EY  +V K
Sbjct:   12 TISLIGILCVYTVSAQQFNNKEIEKAMVRAMEWQEAHPIFAVAPTDWTNGAYQVGIARAHKTTQNQIFLAALKNTGYRNKWNTYDRYFHADDVTVSYGYLYLVMNDTRKNYVDLKPTETFIQKHLYEPNKWRDGTDKDPVKNILWWWCDALFMAPPMLTLYANHTGEMNHLDTMHKYYMETYNLLYNKEEHLFARDTRYQWKGNADDLKEENGKKIFWSRGNGWVLGGLALILDDMPKDYKHRDFYLNLYKEMAAKIKSIQPEDGLWRTSLLSPESFDHGEVSGSGFYTFALAWGINNGILDKSEYVSSVYK 323          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A1M6FYN8_9FLAO (Rhamnogalacturonyl hydrolase YesR n=2 Tax=Pseudozobellia thermophila TaxID=192903 RepID=A0A1M6FYN8_9FLAO)

HSP 1 Score: 467 bits (1202), Expect = 8.190e-163
Identity = 213/320 (66.56%), Postives = 256/320 (80.00%), Query Frame = 1
Query:    1 MKRTHQLVSKSVLLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            M +  +L++   +L  +  L +     I+K+++E +MV AMEWQE HPIF  APTDWTNGAYYVGV++AH+ T NPIF AALKTMGYRN WKP  R YHADD+ ISY+YLY N  RK +VDL PT+ F+  HLY+P+ W++G +  K++KILWWWCDA FMAPPV+T YAK TGE +YLD MHK YMETY+LLYDKEEHLFARD R+ W  +  DLKE NGKKIFW+RGNGWVL GLALVL D+PEDY+H++FYVNLYKE+A +IKE+QH DGLWRTSLLSPES++HGEVS SGFYTFALAWGVN GLL+  EY P VKK
Sbjct:    1 MLKHMKLLNIPTVLTIILSLTMVKAQKIDKQSVEASMVKAMEWQEQHPIFTSAPTDWTNGAYYVGVSKAHEATNNPIFSAALKTMGYRNHWKPWKRFYHADDIIISYSYLYVNEIRKGMVDLEPTEQFILDHLYKPHPWREGVE-GKDQKILWWWCDALFMAPPVLTAYAKLTGEDRYLDEMHKLYMETYDLLYDKEEHLFARDIRFLWTGSPDDLKEKNGKKIFWSRGNGWVLGGLALVLEDMPEDYEHREFYVNLYKEMAQKIKEVQHADGLWRTSLLSPESYDHGEVSGSGFYTFALAWGVNQGLLNAKEYVPVVKK 319          
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Match: A0A2N0FZ77_9FLAO (Rhamnogalacturonyl hydrolase YesR n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A2N0FZ77_9FLAO)

HSP 1 Score: 467 bits (1202), Expect = 8.190e-163
Identity = 208/315 (66.03%), Postives = 255/315 (80.95%), Query Frame = 1
Query:   16 QLVSKSVLLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIFALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHADDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKKILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHLFARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKHQDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFALAWGVNNGLLDKAEYGPAVKK 960
            +L+   + L  +  + L     I+ +N+E +MV AMEWQE HPIF  +PTDWTNGAYYVGV++AH++TKNPIF AALKTMGY+NEWKP  R YHADD+ ISY YLYAN  RK +VDL PT+ F+  HLY P+ W++G +  K+++ILWWWCDA FMAPPV+T YAK TGEQKYLD MHK YMETY+LLYDKEEHLFARD R+ W    +D+KE NGKKIFW+RGNGWV+ GLAL+L D+PEDY+H+DFY+NLYKE+AA+IK +QH DGLWRTSLLSPES++HGEVS SGFYT+AL WG+NNG+L+K EY P V K
Sbjct:    6 RLMKYVLRLLPIVSITLMTAQKIDSKNVESSMVKAMEWQEQHPIFTSSPTDWTNGAYYVGVSKAHESTKNPIFSAALKTMGYKNEWKPWDRFYHADDIIISYTYLYANEIRKGMVDLEPTEKFILDHLYRPHPWREGIE-GKDQQILWWWCDALFMAPPVLTVYAKLTGEQKYLDEMHKLYMETYDLLYDKEEHLFARDIRFLWKGTAEDMKEENGKKIFWSRGNGWVIGGLALILEDMPEDYEHRDFYLNLYKEMAAKIKSVQHSDGLWRTSLLSPESYDHGEVSGSGFYTYALTWGINNGILNKKEYTPVVTK 319          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15379.3108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P7AYI8_9FLAO2.410e-21587.19Glycosyl hydrolase, family 88 n=6 Tax=Flavobacteri... [more]
A0A3S9NT83_9FLAO1.960e-20985.94Glycoside hydrolase family 88 protein n=2 Tax=Mari... [more]
A0A4R7K7U7_9FLAO4.320e-19678.44Rhamnogalacturonyl hydrolase YesR n=1 Tax=Maribact... [more]
A0A0Q0XQA2_9FLAO5.310e-19078.13Uncharacterized protein n=2 Tax=Flavobacteriaceae ... [more]
A0A6I2MPR1_9FLAO1.010e-18784.51Glycoside hydrolase family 88 protein n=2 Tax=Mari... [more]
A0A7Y3HSV6_9FLAO7.610e-17874.43Glycoside hydrolase family 88 protein n=1 Tax=Croc... [more]
A0A5B7SZS7_9FLAO8.050e-17371.74Glycoside hydrolase family 88 protein n=2 Tax=Aggr... [more]
A0A5S3Q5L7_9FLAO7.390e-16769.87Glycoside hydrolase family 88 protein n=1 Tax=Mari... [more]
A0A1M6FYN8_9FLAO8.190e-16366.56Rhamnogalacturonyl hydrolase YesR n=2 Tax=Pseudozo... [more]
A0A2N0FZ77_9FLAO8.190e-16366.03Rhamnogalacturonyl hydrolase YesR n=2 Tax=Flavobac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15379contigE-siliculosus-1a_F_contig15379:4..969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size966
Model size966
Exons1
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
COG Functional cat.S
EggNOG OGs1HXR2@117743,4NGSJ@976,COG4225@1,COG4225@2
EggNOG free text desc.Glycosyl Hydrolase Family 88
Preferred nameyteR
Seed eggNOG ortholog504487.JCM19302_2010
Seed ortholog evalue1.6e-121
Seed ortholog score442.6
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928045.0869856-CDS-E-siliculosus-1a_F_contig15379:3..9691622928045.0869856-CDS-E-siliculosus-1a_F_contig15379:3..969Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15379 4..969 -
1696318785.9995084-CDS-E-siliculosus-1a_F_contig15379:3..9691696318785.9995084-CDS-E-siliculosus-1a_F_contig15379:3..969Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15379 4..969 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15379.3108.1prot_E-siliculosus-1a_F_contig15379.3108.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15379 4..969 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15379.3108.1

>prot_E-siliculosus-1a_F_contig15379.3108.1 ID=prot_E-siliculosus-1a_F_contig15379.3108.1|Name=mRNA_E-siliculosus-1a_F_contig15379.3108.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=322bp
MKRTHQLVSKSVLLFFVACLGLNAQNNINKENIEKAMVSAMEWQEAHPIF
ALAPTDWTNGAYYVGVTRAHQTTKNPIFLAALKTMGYRNEWKPLYRTYHA
DDVAISYAYLYANSTRKNLVDLGPTKAFLDTHLYEPNKWKDGTDKNKEKK
ILWWWCDARFMAPPVITEYAKQTGEQKYLDAMHKNYMETYNLLYDKEEHL
FARDTRYQWGVNEKDLKEPNGKKIFWARGNGWVLSGLALVLTDLPEDYKH
QDFYVNLYKELAARIKEIQHEDGLWRTSLLSPESWNHGEVSASGFYTFAL
AWGVNNGLLDKAEYGPAVKKT*
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mRNA from alignment at E-siliculosus-1a_F_contig15379:4..969-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15379.3108.1 ID=mRNA_E-siliculosus-1a_F_contig15379.3108.1|Name=mRNA_E-siliculosus-1a_F_contig15379.3108.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=966bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15379:4..969- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAACGAACACATCAATTGGTTAGTAAAAGCGTACTACTGTTTTTTGT AGCATGCCTTGGGCTAAATGCCCAAAACAACATAAATAAAGAAAACATTG AAAAAGCAATGGTAAGTGCTATGGAATGGCAGGAAGCGCATCCTATTTTT GCACTTGCTCCTACCGATTGGACCAATGGCGCCTATTATGTGGGTGTCAC CAGAGCACACCAAACGACCAAGAATCCTATATTCTTGGCAGCATTAAAGA CCATGGGCTATCGTAATGAATGGAAACCGCTGTACAGAACCTATCATGCC GATGATGTGGCCATTTCGTATGCCTATTTATACGCCAATTCCACTAGAAA AAACTTGGTGGATTTAGGGCCAACAAAAGCATTCTTGGACACCCATTTGT ACGAACCAAACAAATGGAAAGACGGTACCGATAAAAACAAGGAGAAAAAG ATTCTTTGGTGGTGGTGTGATGCGCGGTTTATGGCGCCGCCCGTAATTAC GGAATACGCTAAGCAAACCGGGGAACAAAAGTACCTCGACGCCATGCACA AAAATTACATGGAAACCTATAACTTATTATACGACAAAGAAGAACATCTT TTCGCAAGGGATACCCGTTACCAATGGGGTGTCAACGAAAAAGACCTCAA AGAACCCAATGGTAAAAAAATATTTTGGGCACGCGGTAACGGATGGGTTT TGAGCGGACTTGCCCTGGTATTGACAGACCTTCCCGAAGATTATAAACAC CAAGATTTCTACGTTAACCTGTACAAGGAACTGGCGGCTAGAATTAAAGA GATACAGCATGAGGACGGACTTTGGAGAACCAGTTTACTTTCACCGGAAT CTTGGAACCACGGTGAAGTGAGTGCCAGTGGCTTTTATACTTTCGCCCTA GCTTGGGGTGTCAATAACGGACTTTTGGACAAAGCGGAGTACGGTCCAGC TGTAAAGAAAACGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15379:4..969-

>mRNA_E-siliculosus-1a_F_contig15379.3108.1 ID=mRNA_E-siliculosus-1a_F_contig15379.3108.1|Name=mRNA_E-siliculosus-1a_F_contig15379.3108.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1932bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15379:4..969- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAACGAACACATCAATTGGTTAGTAAAAGCGTACTACTGTTTTTTGT
AGCATGCCTTGGGCTAAATGCCCAAAACAACATAAATAAAGAAAACATTG
AAAAAGCAATGGTAAGTGCTATGGAATGGCAGGAAGCGCATCCTATTTTT
GCACTTGCTCCTACCGATTGGACCAATGGCGCCTATTATGTGGGTGTCAC
CAGAGCACACCAAACGACCAAGAATCCTATATTCTTGGCAGCATTAAAGA
CCATGGGCTATCGTAATGAATGGAAACCGCTGTACAGAACCTATCATGCC
GATGATGTGGCCATTTCGTATGCCTATTTATACGCCAATTCCACTAGAAA
AAACTTGGTGGATTTAGGGCCAACAAAAGCATTCTTGGACACCCATTTGT
ACGAACCAAACAAATGGAAAGACGGTACCGATAAAAACAAGGAGAAAAAG
ATTCTTTGGTGGTGGTGTGATGCGCGGTTTATGGCGCCGCCCGTAATTAC
GGAATACGCTAAGCAAACCGGGGAACAAAAGTACCTCGACGCCATGCACA
AAAATTACATGGAAACCTATAACTTATTATACGACAAAGAAGAACATCTT
TTCGCAAGGGATACCCGTTACCAATGGGGTGTCAACGAAAAAGACCTCAA
AGAACCCAATGGTAAAAAAATATTTTGGGCACGCGGTAACGGATGGGTTT
TGAGCGGACTTGCCCTGGTATTGACAGACCTTCCCGAAGATTATAAACAC
CAAGATTTCTACGTTAACCTGTACAAGGAACTGGCGGCTAGAATTAAAGA
GATACAGCATGAGGACGGACTTTGGAGAACCAGTTTACTTTCACCGGAAT
CTTGGAACCACGGTGAAGTGAGTGCCAGTGGCTTTTATACTTTCGCCCTA
GCTTGGGGTGTCAATAACGGACTTTTGGACAAAGCGGAGTACGGTCCAGC
TGTAAAGAAAACGTAGATGAAACGAACACATCAATTGGTTAGTAAAAGCG
TACTACTGTTTTTTGTAGCATGCCTTGGGCTAAATGCCCAAAACAACATA
AATAAAGAAAACATTGAAAAAGCAATGGTAAGTGCTATGGAATGGCAGGA
AGCGCATCCTATTTTTGCACTTGCTCCTACCGATTGGACCAATGGCGCCT
ATTATGTGGGTGTCACCAGAGCACACCAAACGACCAAGAATCCTATATTC
TTGGCAGCATTAAAGACCATGGGCTATCGTAATGAATGGAAACCGCTGTA
CAGAACCTATCATGCCGATGATGTGGCCATTTCGTATGCCTATTTATACG
CCAATTCCACTAGAAAAAACTTGGTGGATTTAGGGCCAACAAAAGCATTC
TTGGACACCCATTTGTACGAACCAAACAAATGGAAAGACGGTACCGATAA
AAACAAGGAGAAAAAGATTCTTTGGTGGTGGTGTGATGCGCGGTTTATGG
CGCCGCCCGTAATTACGGAATACGCTAAGCAAACCGGGGAACAAAAGTAC
CTCGACGCCATGCACAAAAATTACATGGAAACCTATAACTTATTATACGA
CAAAGAAGAACATCTTTTCGCAAGGGATACCCGTTACCAATGGGGTGTCA
ACGAAAAAGACCTCAAAGAACCCAATGGTAAAAAAATATTTTGGGCACGC
GGTAACGGATGGGTTTTGAGCGGACTTGCCCTGGTATTGACAGACCTTCC
CGAAGATTATAAACACCAAGATTTCTACGTTAACCTGTACAAGGAACTGG
CGGCTAGAATTAAAGAGATACAGCATGAGGACGGACTTTGGAGAACCAGT
TTACTTTCACCGGAATCTTGGAACCACGGTGAAGTGAGTGCCAGTGGCTT
TTATACTTTCGCCCTAGCTTGGGGTGTCAATAACGGACTTTTGGACAAAG
CGGAGTACGGTCCAGCTGTAAAGAAAACGTAG
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