mRNA_E-siliculosus-1a_F_contig15357.3101.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15357.3101.1
Unique NamemRNA_E-siliculosus-1a_F_contig15357.3101.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: A0A318I8L6_9FLAO (Cytochrome c n=10 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A318I8L6_9FLAO)

HSP 1 Score: 512 bits (1318), Expect = 2.160e-174
Identity = 246/324 (75.93%), Postives = 289/324 (89.20%), Query Frame = 1
Query:    1 FFNSIPEKGLL-SGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNALSKN 969
            FFN+I E GL   G   +  PY++ITEKE  G L+F+ +++SSMKE+PVMVM EMEE RPSYILNRGVYDQPTT+V+PNTPE+IL + ++YPKNRLGL+KWLF + NPLTARV VNR WQRMFG G+V++S+DFGNQG+LPTHPELLDFLAIK ++EGWDT+K+LKY+ALS TYQQS+KV+ ++ E DPEN+LLARAPRLRL+AE+IRDQAL +S LLNKEVGGPSVKPYQPAGIWE TTGGGGGSTA+YI STG+DLYRKSLYTFWKRTVPPPSMMTFDAASRD+CTVKRQETNTPLQALVLLNDPQ+IEASR +A NA+ +N
Sbjct:  382 FFNNIDELGLTPGGAGKIPKPYMTITEKEKNGVLSFVQLQKSSMKEVPVMVMNEMEEIRPSYILNRGVYDQPTTQVYPNTPESILPFPEDYPKNRLGLAKWLFHEDNPLTARVTVNRFWQRMFGRGLVASSFDFGNQGSLPTHPELLDFLAIKLKEEGWDTRKILKYMALSATYQQSSKVSKKLQELDPENRLLARAPRLRLTAELIRDQALKISGLLNKEVGGPSVKPYQPAGIWEATTGGGGGSTATYITSTGKDLYRKSLYTFWKRTVPPPSMMTFDAASRDLCTVKRQETNTPLQALVLLNDPQIIEASRLIAKNAIDRN 705          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: A0A430K2Z3_9FLAO (DUF1553 domain-containing protein n=2 Tax=Arenibacter TaxID=178469 RepID=A0A430K2Z3_9FLAO)

HSP 1 Score: 506 bits (1302), Expect = 2.730e-172
Identity = 245/321 (76.32%), Postives = 286/321 (89.10%), Query Frame = 1
Query:    1 FFNSIPEKGLL-SGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNAL 960
            FFN+I E GL   G   +  PY++ITEKE  G L+F+ M+++ MKEIPVMVM EME+ RPS+ILNRGVYDQPTT+V+PNTP++IL +  EYP+NRLGL+KWLF   NPLTARVAVNR WQRMFGNG+V++S+DFGNQG+LPTHP+LLDFLAIKFR+EGWDT+K+LKYIALS TYQQST+VT E+ E DPEN+LLARAPRLRL+AE+IRDQAL +S LLN+EVGGPSVKPYQP+GIWE TTGGGGGSTA+Y+ STG+DLYRKSLYTFWKRTVPPPSMMTFDAASRD+CTVKRQETNTPLQALVLLNDPQ+IEASR LA  A+
Sbjct:  358 FFNNIDELGLTPGGAGKIPKPYMTITEKEKNGVLSFVQMQKTEMKEIPVMVMNEMEDIRPSFILNRGVYDQPTTQVYPNTPQSILPFPSEYPQNRLGLAKWLFHKDNPLTARVAVNRFWQRMFGNGLVASSFDFGNQGSLPTHPKLLDFLAIKFREEGWDTRKILKYIALSATYQQSTEVTKELQELDPENQLLARAPRLRLTAEVIRDQALKISGLLNREVGGPSVKPYQPSGIWEATTGGGGGSTATYVTSTGKDLYRKSLYTFWKRTVPPPSMMTFDAASRDLCTVKRQETNTPLQALVLLNDPQLIEASRLLAKTAM 678          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: UPI000CD3DEF8 (PSD1 and planctomycete cytochrome C domain-containing protein n=3 Tax=Arenibacter TaxID=178469 RepID=UPI000CD3DEF8)

HSP 1 Score: 506 bits (1303), Expect = 3.950e-172
Identity = 243/326 (74.54%), Postives = 289/326 (88.65%), Query Frame = 1
Query:    1 FFNSIPEKGLL-SGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNALSKNEQ 975
            FFN+I E GL   G   +  P+++ITEKE  G L+F+ +++S+MKE+PVMVM EMEE RPSYILNRGVYDQPTT+V+PNTPE+IL + ++YPKNRLGL+KWLF   NPLTARV VNR WQRMFG+G+V++S+DFGNQG+LPTHPELLD+LAIKFR EGWD +K+ KYIALS TYQQST V+ E+LE DPEN+LLARAPRLRL+AE+IRDQAL +S LLN+EVGGPSVKPYQPAGIWE TTGGGGGSTA+YI STG+DLYRKSLYTFWKRTVPPPSMMTFDAASRD+C+VKRQETNTPLQALVLLNDPQ+IEA+R LA NA+ ++++
Sbjct:  382 FFNNIDELGLTPGGAGKIPKPFMTITEKEKNGVLSFVQLQKSNMKEVPVMVMNEMEEIRPSYILNRGVYDQPTTQVYPNTPESILPFPEDYPKNRLGLAKWLFHKDNPLTARVTVNRFWQRMFGSGLVASSFDFGNQGSLPTHPELLDYLAIKFRNEGWDARKIFKYIALSATYQQSTTVSKELLELDPENQLLARAPRLRLTAELIRDQALKISGLLNREVGGPSVKPYQPAGIWEATTGGGGGSTATYITSTGKDLYRKSLYTFWKRTVPPPSMMTFDAASRDLCSVKRQETNTPLQALVLLNDPQIIEAARILAKNAIDRHKE 707          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: A0A1H4MFR6_9FLAO (Planctomycete cytochrome C n=10 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A1H4MFR6_9FLAO)

HSP 1 Score: 504 bits (1297), Expect = 2.580e-171
Identity = 242/323 (74.92%), Postives = 282/323 (87.31%), Query Frame = 1
Query:    1 FFNSIPEKGLLSGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNALSKN 969
            FFN+IPEKGLL    DL +PYI +T+KE    L FIN+E+S MKE+PVMVMKEM++PR S+IL RG+YDQ   EVFP+TPE+IL + D YPKNRLGL+KWLFDDK+PLTARVAVNRLWQRMFG+GIV++S+DFGNQG+LPTHPELLD+LAIK++ EGWDT+KMLKYIA+SE YQQ TK +PE LE+DPENK LARA RLRLS+E IRDQALA S LLN+EVGGPSVKPYQP GIWEETTGGGGGSTASY  S GED+YRKS+YTFWKRTVPPPSMMTFD++SRD C+VKRQETNTPLQALVLLNDPQ++EA+R  A+  +  N
Sbjct:  376 FFNTIPEKGLLDNAADLPEPYIKVTQKEVNDILGFINLEKSEMKEVPVMVMKEMDQPRSSFILKRGIYDQYGDEVFPDTPESILPF-DNYPKNRLGLAKWLFDDKHPLTARVAVNRLWQRMFGSGIVASSFDFGNQGSLPTHPELLDYLAIKYKTEGWDTRKMLKYIAMSEAYQQDTKASPEKLEQDPENKYLARASRLRLSSEAIRDQALAFSGLLNREVGGPSVKPYQPEGIWEETTGGGGGSTASYTLSEGEDVYRKSIYTFWKRTVPPPSMMTFDSSSRDYCSVKRQETNTPLQALVLLNDPQIVEAARVAAVGEMEAN 697          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: UPI001FF6F786 (PSD1 and planctomycete cytochrome C domain-containing protein n=1 Tax=Cellulophaga sp. F20128 TaxID=2926413 RepID=UPI001FF6F786)

HSP 1 Score: 500 bits (1287), Expect = 9.340e-170
Identity = 242/321 (75.39%), Postives = 283/321 (88.16%), Query Frame = 1
Query:    1 FFNSIPEKGLL-SGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNAL 960
            FFN+I E+GL+  G + +  P+I+ITEKE E  L+F+ +++SS K +PVMVM+EME+PR +Y+L+RG YDQPTTEVFPNTP  ILA+ + YPKNRLGL+KWLF+  NPLTARVAVNR WQRMFG G+V++S+DFGNQGALPTHPELLDFLAIK R EGWDT+K+LKYIALS TYQQ T +T E LEKDP NKLLARAPR+RLSAEMIRDQALA+S LLNKE+GGPSVKPYQP G+W+ETTGGGGGSTASYI S G+DLYRKSLYTFWKRTVPPPSMMTFDA+SRD+C+V RQETNTPLQALVLLNDPQ++EASR LA NA+
Sbjct:  379 FFNNIDEQGLVPGGRNTIPKPFINITEKEKEDVLSFVQLQKSSRKNLPVMVMQEMEKPRQTYVLDRGAYDQPTTEVFPNTPTAILAFPEAYPKNRLGLAKWLFNPDNPLTARVAVNRFWQRMFGTGLVASSFDFGNQGALPTHPELLDFLAIKLRDEGWDTKKILKYIALSATYQQQTIITKEALEKDPTNKLLARAPRIRLSAEMIRDQALAISGLLNKEIGGPSVKPYQPEGLWKETTGGGGGSTASYIPSEGKDLYRKSLYTFWKRTVPPPSMMTFDASSRDLCSVIRQETNTPLQALVLLNDPQLVEASRVLASNAM 699          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: A0A0D5YW97_9FLAO (Cytochrome C-containing protein n=3 Tax=Muricauda TaxID=111500 RepID=A0A0D5YW97_9FLAO)

HSP 1 Score: 499 bits (1286), Expect = 9.540e-170
Identity = 236/322 (73.29%), Postives = 283/322 (87.89%), Query Frame = 1
Query:    1 FFNSIPEKGLLSGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNALSK 966
            FFN+I EKGLLS  D++ +PYI+IT++E EG L F+NM  ++++E+PVMVMKEME PRP+Y+L+RGVYDQPT +VFP TPE IL +  +YPKNRLGLSKWLF   NPLTARV VNR+WQ+MFG G+V +SYDFGNQG+LPTHPELLDFLA+K  +E WD +++ KYIA+S TYQQ+T+ T ++L+KDPEN+LLARAPRLRL+AE IRDQALAVS LLNK VGGPSVKPYQP GIWEETTGGGGGSTA YI STG++LYRKSLYTFWKRTVPPPSMMTFDAASRD+C+VKR+ETNTPLQALVLLNDPQ+IEA+RALA + + +
Sbjct:  369 FFNNINEKGLLSSADEIPEPYITITKEEAEGVLQFVNMNEATVEEVPVMVMKEMERPRPTYVLDRGVYDQPTEQVFPATPERILPFPKDYPKNRLGLSKWLFHQDNPLTARVVVNRVWQKMFGKGLVESSYDFGNQGSLPTHPELLDFLAVKLMEENWDLKQLTKYIAISATYQQTTRTTQDLLKKDPENRLLARAPRLRLAAETIRDQALAVSGLLNKTVGGPSVKPYQPEGIWEETTGGGGGSTARYIPSTGKNLYRKSLYTFWKRTVPPPSMMTFDAASRDLCSVKREETNTPLQALVLLNDPQLIEAARALAYHTIKE 690          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: A0A559NT90_9FLAO (Cytochrome c n=3 Tax=Maribacter TaxID=252356 RepID=A0A559NT90_9FLAO)

HSP 1 Score: 497 bits (1280), Expect = 9.430e-169
Identity = 241/320 (75.31%), Postives = 282/320 (88.12%), Query Frame = 1
Query:    1 FFNSIPEKGLLSGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNAL 960
            FFN+IPE+GLL+  ++L  PYI+IT KE    L FIN+E+S MKE+PVMVMKEM+EPR SYIL+RG+YDQ TT+V+P+TP +IL + DE+PKNRLGL++WLF+ ++PLTARV+VNRLWQRMFGNGIVSTS+DFGNQGALPTHPELLDFLAIK+R EGWDTQKMLKY+A+S TY+Q TKV  E LE DPENK LARA RLRLS+E IRDQALA S LL+KEVGGPSVKPYQP GIWEETTGGGGGSTASY  S G D+YRKSLYTFWKRTVPPPSMMTFD+++RD C+VKRQETNTPLQALVLLNDPQ++EA+RA A+  +
Sbjct:  376 FFNTIPEQGLLANANELPTPYITITPKEVNDVLGFINLEKSDMKEVPVMVMKEMDEPRSSYILDRGIYDQHTTQVYPDTPSSILPF-DEFPKNRLGLAQWLFNKEHPLTARVSVNRLWQRMFGNGIVSTSFDFGNQGALPTHPELLDFLAIKYRTEGWDTQKMLKYMAMSATYRQDTKVNKEKLESDPENKFLARASRLRLSSEAIRDQALAFSGLLSKEVGGPSVKPYQPEGIWEETTGGGGGSTASYTVSDGTDIYRKSLYTFWKRTVPPPSMMTFDSSTRDYCSVKRQETNTPLQALVLLNDPQLVEAARAAAVTEM 694          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: A0A7H9AKX0_9FLAO (DUF1553 domain-containing protein n=1 Tax=Costertonia aggregata TaxID=343403 RepID=A0A7H9AKX0_9FLAO)

HSP 1 Score: 496 bits (1278), Expect = 1.730e-168
Identity = 238/322 (73.91%), Postives = 282/322 (87.58%), Query Frame = 1
Query:    1 FFNSIPEKGLLSGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNALSK 966
            FFN+  EK ++   D+  +PYI+ITEKE  G L+FIN+++S  KEIPVMVM E EE RP++ILNRGVYDQPT +V+PNTP ++L + + Y K+RLGLSKWLF+  NPLTARV+VNRLWQRMFG G+VSTSYDFGNQGALP+HPELLD+LA+K++ +GWDT+KMLKYIA+S TY+QS+ + P +LEKDPEN+ LARAPR+RL+AEMIRDQAL +S LL KEVGGPSVKPYQPAGIWEETTGGGGGSTA Y+Q TGEDLYRKSLYTFWKRTVPPPSMMTFD +SRD+C+VKRQETNTPLQALVLLNDPQ+IEASRALA N + K
Sbjct:  372 FFNNNKEKQVVPLPDETPEPYITITEKEANGVLSFINLQKSEKKEIPVMVMYEREEKRPAFILNRGVYDQPTDQVYPNTPSSVLDFPENYSKDRLGLSKWLFNADNPLTARVSVNRLWQRMFGTGLVSTSYDFGNQGALPSHPELLDYLALKYQDQGWDTKKMLKYIAMSATYRQSSVIDPVILEKDPENRWLARAPRMRLTAEMIRDQALQISGLLVKEVGGPSVKPYQPAGIWEETTGGGGGSTARYVQGTGEDLYRKSLYTFWKRTVPPPSMMTFDTSSRDLCSVKRQETNTPLQALVLLNDPQLIEASRALATNTIQK 693          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: UPI0003F7A1B1 (PSD1 and planctomycete cytochrome C domain-containing protein n=1 Tax=Arenibacter certesii TaxID=228955 RepID=UPI0003F7A1B1)

HSP 1 Score: 493 bits (1270), Expect = 3.620e-167
Identity = 237/323 (73.37%), Postives = 278/323 (86.07%), Query Frame = 1
Query:    1 FFNSIPEKGLL-SGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNALSK 966
            FFN+I E G+   G   +  P++ ITEKE    L+F+ +++S MKE+PVM+M EME  RPSYILNRGVYDQPTT+V+PNTPE IL +  +YPKNRLGL+KWLF  +NPLTARV VNR WQRMFG G+V++S+DFGNQG+LPTHPELLD+LA+KFR EGWD++K+LKYIALS TYQQST VT +M E DPEN+LLARAPR+RL+AE+IRDQAL +S LLNKEVGGPSVKPYQP GIWE TTGGGGGSTA+Y+ STG DLYRKSLYTFWKRTVPPPSMMTFDAASRD+C VKRQETNTPLQALVLLNDPQ+IEASR +A NA+ +
Sbjct:  381 FFNNIDEVGITPGGAGKIPSPFMVITEKEKNDVLSFVQLQKSEMKEVPVMIMAEMEHVRPSYILNRGVYDQPTTQVYPNTPEAILPFPPDYPKNRLGLAKWLFHRENPLTARVTVNRYWQRMFGTGLVASSFDFGNQGSLPTHPELLDYLAVKFRDEGWDSKKILKYIALSATYQQSTHVTKKMQELDPENQLLARAPRIRLTAELIRDQALQISGLLNKEVGGPSVKPYQPEGIWEATTGGGGGSTATYVTSTGADLYRKSLYTFWKRTVPPPSMMTFDAASRDLCNVKRQETNTPLQALVLLNDPQIIEASRIIAKNAMDQ 703          
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Match: A0A4R7K785_9FLAO (Cytochrome c n=2 Tax=Maribacter spongiicola TaxID=1206753 RepID=A0A4R7K785_9FLAO)

HSP 1 Score: 493 bits (1269), Expect = 4.040e-167
Identity = 238/330 (72.12%), Postives = 286/330 (86.67%), Query Frame = 1
Query:    1 FFNSIPEKGLLSGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMVMKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKWLFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLAIKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLRLSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYIQSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQALVLLNDPQVIEASRALALNAL-----SKNEQ 975
            FFN+IPEKGLL+   +L +PYI +T KE    L FIN+ +S MKE+PVMVMKEM++PRP++IL RG+YDQ   EVFP+TP +IL + D+YPKNRLGL++WLF+DK+PLTARVAVNRLWQRMFG+GIV++S+DFGNQG+LPTHPELLD+LAIK++ EGW+T++MLKYIA+SE YQQ TK +PE LE+DPENK LARA RLRLS+E IRDQALA S LLNKEVGGPSVKPYQP GIWEETTGGGGGSTASY  S G+D+YRKS+YTFWKRTVPPPSMMTFD++SRD C+VKRQETNTPLQALVLLNDPQ++EA+R  A+  +     S+NEQ
Sbjct:  374 FFNNIPEKGLLANAAELPEPYIKVTPKEVNDILGFINLNKSDMKEVPVMVMKEMDQPRPTFILKRGIYDQYGDEVFPDTPSSILPF-DDYPKNRLGLAQWLFEDKHPLTARVAVNRLWQRMFGSGIVASSFDFGNQGSLPTHPELLDYLAIKYKNEGWNTREMLKYIAMSEAYQQDTKASPEKLEQDPENKYLARASRLRLSSEAIRDQALAFSGLLNKEVGGPSVKPYQPEGIWEETTGGGGGSTASYTLSEGKDVYRKSIYTFWKRTVPPPSMMTFDSSSRDYCSVKRQETNTPLQALVLLNDPQIVEAARVAAVGEMTAHPNSENEQ 702          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15357.3101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A318I8L6_9FLAO2.160e-17475.93Cytochrome c n=10 Tax=Flavobacteriaceae TaxID=4954... [more]
A0A430K2Z3_9FLAO2.730e-17276.32DUF1553 domain-containing protein n=2 Tax=Arenibac... [more]
UPI000CD3DEF83.950e-17274.54PSD1 and planctomycete cytochrome C domain-contain... [more]
A0A1H4MFR6_9FLAO2.580e-17174.92Planctomycete cytochrome C n=10 Tax=Flavobacteriac... [more]
UPI001FF6F7869.340e-17075.39PSD1 and planctomycete cytochrome C domain-contain... [more]
A0A0D5YW97_9FLAO9.540e-17073.29Cytochrome C-containing protein n=3 Tax=Muricauda ... [more]
A0A559NT90_9FLAO9.430e-16975.31Cytochrome c n=3 Tax=Maribacter TaxID=252356 RepID... [more]
A0A7H9AKX0_9FLAO1.730e-16873.91DUF1553 domain-containing protein n=1 Tax=Costerto... [more]
UPI0003F7A1B13.620e-16773.37PSD1 and planctomycete cytochrome C domain-contain... [more]
A0A4R7K785_9FLAO4.040e-16772.12Cytochrome c n=2 Tax=Maribacter spongiicola TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15357contigE-siliculosus-1a_F_contig15357:2..979 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size978
Model size978
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelArenibacter
COG Functional cat.C
EggNOG OGs1HWYF@117743,23HTY@178469,4NEPV@976,COG2010@1,COG2010@2
EggNOG free text desc.Planctomycete cytochrome C
Seed eggNOG ortholog616991.JPOO01000001_gene4000
Seed ortholog evalue3.3e-143
Seed ortholog score514.6
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928043.9650054-CDS-E-siliculosus-1a_F_contig15357:1..9791622928043.9650054-CDS-E-siliculosus-1a_F_contig15357:1..979Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15357 2..979 -
1696318785.4400678-CDS-E-siliculosus-1a_F_contig15357:1..9791696318785.4400678-CDS-E-siliculosus-1a_F_contig15357:1..979Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15357 2..979 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15357.3101.1prot_E-siliculosus-1a_F_contig15357.3101.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15357 2..979 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15357.3101.1

>prot_E-siliculosus-1a_F_contig15357.3101.1 ID=prot_E-siliculosus-1a_F_contig15357.3101.1|Name=mRNA_E-siliculosus-1a_F_contig15357.3101.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=326bp
FFNSIPEKGLLSGVDDLADPYISITEKETEGALNFINMERSSMKEIPVMV
MKEMEEPRPSYILNRGVYDQPTTEVFPNTPETILAYSDEYPKNRLGLSKW
LFDDKNPLTARVAVNRLWQRMFGNGIVSTSYDFGNQGALPTHPELLDFLA
IKFRKEGWDTQKMLKYIALSETYQQSTKVTPEMLEKDPENKLLARAPRLR
LSAEMIRDQALAVSNLLNKEVGGPSVKPYQPAGIWEETTGGGGGSTASYI
QSTGEDLYRKSLYTFWKRTVPPPSMMTFDAASRDICTVKRQETNTPLQAL
VLLNDPQVIEASRALALNALSKNEQS
back to top

mRNA from alignment at E-siliculosus-1a_F_contig15357:2..979-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15357.3101.1 ID=mRNA_E-siliculosus-1a_F_contig15357.3101.1|Name=mRNA_E-siliculosus-1a_F_contig15357.3101.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=978bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15357:2..979- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTTTTCAATTCCATACCAGAAAAGGGATTACTATCAGGAGTAGATGATCT TGCAGACCCCTATATCAGCATAACAGAAAAAGAAACCGAAGGGGCTCTGA ATTTTATCAATATGGAGCGTAGTAGTATGAAAGAAATTCCGGTCATGGTG ATGAAAGAAATGGAAGAACCTCGCCCATCTTATATTCTAAATAGAGGGGT TTATGATCAACCAACTACTGAAGTGTTTCCGAATACCCCAGAAACAATTT TAGCGTATTCGGATGAATATCCTAAAAACAGATTAGGCCTTTCTAAATGG TTGTTCGACGACAAAAACCCATTAACTGCAAGAGTTGCTGTAAATAGATT GTGGCAACGTATGTTTGGCAATGGTATCGTAAGTACTTCTTATGATTTTG GTAACCAAGGTGCCTTACCTACACACCCAGAATTATTAGATTTCTTAGCC ATAAAGTTTCGAAAAGAAGGCTGGGATACTCAAAAGATGCTAAAATATAT TGCCCTATCGGAAACCTATCAGCAAAGCACGAAGGTGACTCCAGAAATGT TAGAAAAAGATCCGGAAAATAAATTATTGGCTAGAGCACCACGATTACGC CTATCTGCTGAAATGATTCGTGATCAAGCTTTAGCAGTAAGTAACCTTCT AAACAAAGAAGTAGGTGGGCCCAGTGTGAAACCCTATCAACCCGCTGGAA TTTGGGAAGAAACCACTGGAGGTGGCGGTGGAAGTACCGCTTCTTATATT CAAAGTACGGGTGAAGATTTATATCGAAAAAGTTTATATACCTTTTGGAA ACGAACGGTTCCGCCGCCAAGCATGATGACATTTGACGCGGCTTCAAGGG ATATTTGTACGGTTAAAAGACAAGAAACCAACACGCCTTTACAAGCCTTA GTGTTACTGAACGATCCTCAAGTGATTGAAGCGTCTCGTGCTTTAGCCTT AAACGCTTTATCAAAAAACGAGCAATCT
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15357:2..979-

>mRNA_E-siliculosus-1a_F_contig15357.3101.1 ID=mRNA_E-siliculosus-1a_F_contig15357.3101.1|Name=mRNA_E-siliculosus-1a_F_contig15357.3101.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1956bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15357:2..979- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTTTTCAATTCCATACCAGAAAAGGGATTACTATCAGGAGTAGATGATCT
TGCAGACCCCTATATCAGCATAACAGAAAAAGAAACCGAAGGGGCTCTGA
ATTTTATCAATATGGAGCGTAGTAGTATGAAAGAAATTCCGGTCATGGTG
ATGAAAGAAATGGAAGAACCTCGCCCATCTTATATTCTAAATAGAGGGGT
TTATGATCAACCAACTACTGAAGTGTTTCCGAATACCCCAGAAACAATTT
TAGCGTATTCGGATGAATATCCTAAAAACAGATTAGGCCTTTCTAAATGG
TTGTTCGACGACAAAAACCCATTAACTGCAAGAGTTGCTGTAAATAGATT
GTGGCAACGTATGTTTGGCAATGGTATCGTAAGTACTTCTTATGATTTTG
GTAACCAAGGTGCCTTACCTACACACCCAGAATTATTAGATTTCTTAGCC
ATAAAGTTTCGAAAAGAAGGCTGGGATACTCAAAAGATGCTAAAATATAT
TGCCCTATCGGAAACCTATCAGCAAAGCACGAAGGTGACTCCAGAAATGT
TAGAAAAAGATCCGGAAAATAAATTATTGGCTAGAGCACCACGATTACGC
CTATCTGCTGAAATGATTCGTGATCAAGCTTTAGCAGTAAGTAACCTTCT
AAACAAAGAAGTAGGTGGGCCCAGTGTGAAACCCTATCAACCCGCTGGAA
TTTGGGAAGAAACCACTGGAGGTGGCGGTGGAAGTACCGCTTCTTATATT
CAAAGTACGGGTGAAGATTTATATCGAAAAAGTTTATATACCTTTTGGAA
ACGAACGGTTCCGCCGCCAAGCATGATGACATTTGACGCGGCTTCAAGGG
ATATTTGTACGGTTAAAAGACAAGAAACCAACACGCCTTTACAAGCCTTA
GTGTTACTGAACGATCCTCAAGTGATTGAAGCGTCTCGTGCTTTAGCCTT
AAACGCTTTATCAAAAAACGAGCAATCTTTTTTCAATTCCATACCAGAAA
AGGGATTACTATCAGGAGTAGATGATCTTGCAGACCCCTATATCAGCATA
ACAGAAAAAGAAACCGAAGGGGCTCTGAATTTTATCAATATGGAGCGTAG
TAGTATGAAAGAAATTCCGGTCATGGTGATGAAAGAAATGGAAGAACCTC
GCCCATCTTATATTCTAAATAGAGGGGTTTATGATCAACCAACTACTGAA
GTGTTTCCGAATACCCCAGAAACAATTTTAGCGTATTCGGATGAATATCC
TAAAAACAGATTAGGCCTTTCTAAATGGTTGTTCGACGACAAAAACCCAT
TAACTGCAAGAGTTGCTGTAAATAGATTGTGGCAACGTATGTTTGGCAAT
GGTATCGTAAGTACTTCTTATGATTTTGGTAACCAAGGTGCCTTACCTAC
ACACCCAGAATTATTAGATTTCTTAGCCATAAAGTTTCGAAAAGAAGGCT
GGGATACTCAAAAGATGCTAAAATATATTGCCCTATCGGAAACCTATCAG
CAAAGCACGAAGGTGACTCCAGAAATGTTAGAAAAAGATCCGGAAAATAA
ATTATTGGCTAGAGCACCACGATTACGCCTATCTGCTGAAATGATTCGTG
ATCAAGCTTTAGCAGTAAGTAACCTTCTAAACAAAGAAGTAGGTGGGCCC
AGTGTGAAACCCTATCAACCCGCTGGAATTTGGGAAGAAACCACTGGAGG
TGGCGGTGGAAGTACCGCTTCTTATATTCAAAGTACGGGTGAAGATTTAT
ATCGAAAAAGTTTATATACCTTTTGGAAACGAACGGTTCCGCCGCCAAGC
ATGATGACATTTGACGCGGCTTCAAGGGATATTTGTACGGTTAAAAGACA
AGAAACCAACACGCCTTTACAAGCCTTAGTGTTACTGAACGATCCTCAAG
TGATTGAAGCGTCTCGTGCTTTAGCCTTAAACGCTTTATCAAAAAACGAG
CAATCT
back to top