mRNA_E-siliculosus-1a_F_contig15351.3100.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15351.3100.1
Unique NamemRNA_E-siliculosus-1a_F_contig15351.3100.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: A0A0D5LY65_9GAMM (Uncharacterized protein n=34 Tax=Bacteria TaxID=2 RepID=A0A0D5LY65_9GAMM)

HSP 1 Score: 577 bits (1486), Expect = 4.020e-204
Identity = 305/326 (93.56%), Postives = 310/326 (95.09%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGVF 978
            LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLM+FALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELR++LK                GIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALC+FGIFSISNSMYDVIVLLAMG+F
Sbjct:   93 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMIFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRQSLKXXXXXXXXXXXXXXXXGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCVFGIFSISNSMYDVIVLLAMGIF 418
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BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: A0A1H3CW56_9GAMM (Putative tricarboxylic transport membrane protein n=2 Tax=Aidingimonas TaxID=1395977 RepID=A0A1H3CW56_9GAMM)

HSP 1 Score: 557 bits (1435), Expect = 2.280e-196
Identity = 286/326 (87.73%), Postives = 314/326 (96.32%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGVF 978
            LDGYPLA+QGKAGKALNMALYSSCTGDFISN+SLIFIAAPLA+LALRIGPPEYFMLMVFALTTVAGVSGRSLLLGL+SACLGLLLATVGEDMYGSFRFD+TV+M+ GL+VAPVLIGLFAIPELLK++VFR+  +   ++LGDNRVTR ELRR+L+++ KGS+IGVVMGAIPGIGPSAAAFSSYGEAQR+SKN  NFGKGE+EGIAASESANNGCCGSTMIPLLALG+PGDVITGVMLGAFMIHG+TPGPMLFE NL+EVYMLFIGMLFSS+LLFGAGKATMRFF+HISRIPPGLMAPIVL LCLFGIF+I+NSMYDVIVLLAMGVF
Sbjct:   93 LDGYPLARQGKAGKALNMALYSSCTGDFISNISLIFIAAPLAMLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLISACLGLLLATVGEDMYGSFRFDMTVEMRDGLSVAPVLIGLFAIPELLKLVVFRHAGAKTALELGDNRVTRAELRRSLRSLFKGSLIGVVMGAIPGIGPSAAAFSSYGEAQRTSKNHANFGKGEIEGIAASESANNGCCGSTMIPLLALGIPGDVITGVMLGAFMIHGLTPGPMLFEENLNEVYMLFIGMLFSSILLFGAGKATMRFFTHISRIPPGLMAPIVLILCLFGIFAIANSMYDVIVLLAMGVF 418
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BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: A0A5B8JA17_9RHOB (C4-dicarboxylate ABC transporter permease n=1 Tax=Qingshengfaniella alkalisoli TaxID=2599296 RepID=A0A5B8JA17_9RHOB)

HSP 1 Score: 498 bits (1283), Expect = 3.500e-173
Identity = 258/325 (79.38%), Postives = 295/325 (90.77%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGV 975
            LDGYPLAQ+GKAGKALNMALYSSC GDFISN+SLIF+AAPLALLALR+GPPEY MLM+FALTTVAGVSG SLLLG+VSACLGLLLATVGED+YGSFRF  T DMQ+GL+VAPVLIGLFA+PEL+K+IVFRN Q +  MQ+G ++V+R E   +LK++++GS IGVV+GAIPGIGPSAAAF SYGEAQR+SKN  NFGKGELEGIAASESANNGCCG+TMIPLLALGVPGDVITGVMLGAF+I G+TPGP+LF+ NL+EVYMLFIGML SSVLLFGAGK TMR F+HI+RIP  L+ P VL LC+FGI+SISNSM+DV+VLL MGV
Sbjct:   93 LDGYPLAQKGKAGKALNMALYSSCIGDFISNISLIFLAAPLALLALRVGPPEYCMLMIFALTTVAGVSGNSLLLGVVSACLGLLLATVGEDIYGSFRFAFTDDMQAGLSVAPVLIGLFALPELIKLIVFRNPQVNDAMQVGFDKVSRSEFMGSLKSIIRGSGIGVVLGAIPGIGPSAAAFFSYGEAQRTSKNSANFGKGELEGIAASESANNGCCGATMIPLLALGVPGDVITGVMLGAFLIQGLTPGPLLFQTNLNEVYMLFIGMLVSSVLLFGAGKMTMRMFTHIARIPVTLLTPAVLVLCIFGIYSISNSMFDVVVLLVMGV 417
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BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: UPI0018E5FDCB (tripartite tricarboxylate transporter permease n=1 Tax=Pontibaca salina TaxID=2795731 RepID=UPI0018E5FDCB)

HSP 1 Score: 498 bits (1282), Expect = 4.960e-173
Identity = 257/325 (79.08%), Postives = 295/325 (90.77%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGV 975
            LDGYPLA+QGKAGKALNMALYSS  GDF SN+SLIF+AAPLA+LALR+GPPEYFMLMVFALTTVAGVSG SLLLGLVSACLGLLLATVGEDMYGSFRF +T +MQ+GLAVAPVLIGLFA+PEL+K+IVFRN    +PM+LGDNRV+  E+R +LK++L+GS IGVV+GAIPGIGP++AAF SYGEAQR+SK   NFGKGELEGIAASESANNG CG+TMIPLLALGVPGDVITGVMLGAFMI G+TPGP+LF+ N+HE+YMLFIGM+ SSVLLFGAGK TMR FS+++ IPP L+  +VL LCLFGI+SISNSM+DV VLLA+GV
Sbjct:   93 LDGYPLARQGKAGKALNMALYSSVIGDFFSNISLIFLAAPLAILALRVGPPEYFMLMVFALTTVAGVSGNSLLLGLVSACLGLLLATVGEDMYGSFRFAMTNEMQAGLAVAPVLIGLFALPELIKLIVFRNPPKTEPMKLGDNRVSGREIRASLKSILRGSTIGVVLGAIPGIGPASAAFFSYGEAQRTSKTPANFGKGELEGIAASESANNGACGATMIPLLALGVPGDVITGVMLGAFMIQGLTPGPLLFQTNMHEIYMLFIGMMVSSVLLFGAGKITMRAFSYVAEIPPTLLTSVVLLLCLFGIYSISNSMFDVTVLLALGV 417
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BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: UPI000AAD0409 (tripartite tricarboxylate transporter permease n=1 Tax=Nitratireductor aquibiodomus TaxID=204799 RepID=UPI000AAD0409)

HSP 1 Score: 493 bits (1270), Expect = 1.780e-171
Identity = 254/325 (78.15%), Postives = 293/325 (90.15%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGV 975
            LDG+PLAQ+GKAGKALNMAL SSC GDF+SN+SLIF+AAPLALLALR+GPPEYFMLM FALT VA +SG SLLLG+VSAC GLLLATVGEDMYGSFRF +T DM+SGL+VAPVLIGLFA+PELL++I+FR     + M+LGDNR+T  E R +LK++++GS IGVV+GAIPGIGPSAAAF SYGEA+RSS N ENFGKGELEGIAASESANNGCCG+TMIPLLALGVPGDVITGVMLGAFMI G+TPGP+LF+NNL+EVYMLFIGM+FSSVLLFGAGK T+RFFSHIS IP  L+ P+VL LC++GI+SIS+SM+DV VLL MGV
Sbjct:   93 LDGWPLAQKGKAGKALNMALISSCIGDFLSNISLIFLAAPLALLALRVGPPEYFMLMAFALTMVASISGGSLLLGVVSACFGLLLATVGEDMYGSFRFAMTEDMKSGLSVAPVLIGLFALPELLRLIMFREENHGQAMKLGDNRLTLAEFRGSLKSIIRGSFIGVVLGAIPGIGPSAAAFFSYGEARRSSPNSENFGKGELEGIAASESANNGCCGATMIPLLALGVPGDVITGVMLGAFMIQGLTPGPLLFQNNLNEVYMLFIGMMFSSVLLFGAGKLTVRFFSHISSIPQVLLTPVVLMLCIYGIYSISSSMFDVTVLLVMGV 417
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BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: I5C6G0_9HYPH (Uncharacterized protein n=8 Tax=Proteobacteria TaxID=1224 RepID=I5C6G0_9HYPH)

HSP 1 Score: 494 bits (1271), Expect = 2.400e-171
Identity = 254/325 (78.15%), Postives = 294/325 (90.46%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGV 975
            LDG+PLAQ+GKAGKALNMAL SSC GDF+SN+SLIF+AAPLALLALR+GPPEYFMLM FALT VA +SG SLLLG+VSAC GLLLATVGEDMYGSFRF +T DM+SGL+VAPVLIGLFA+PELL++I+FR+    + M+LGDNR+T  E R +LK++++GS IGVV+GAIPGIGPSAAAF SYGEA+RSS N ENFGKGELEGIAASESANNGCCG+TMIPLLALGVPGDVITGVMLGAFMI G+TPGP+LF+NNL+EVYMLFIGM+FSSVLLFGAGK T+RFFSHIS IP  L+ P+VL LC++GI+SIS+SM+DV VLL MGV
Sbjct:   93 LDGWPLAQKGKAGKALNMALISSCIGDFLSNISLIFLAAPLALLALRVGPPEYFMLMAFALTMVASISGGSLLLGVVSACFGLLLATVGEDMYGSFRFAMTEDMKSGLSVAPVLIGLFALPELLRLIMFRDENHGQAMKLGDNRLTLAEFRGSLKSIIRGSFIGVVLGAIPGIGPSAAAFFSYGEARRSSPNSENFGKGELEGIAASESANNGCCGATMIPLLALGVPGDVITGVMLGAFMIQGLTPGPLLFQNNLNEVYMLFIGMMFSSVLLFGAGKLTVRFFSHISSIPQVLLTPVVLMLCIYGIYSISSSMFDVTVLLVMGV 417
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BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: A0A1Y5TFQ6_9RHOB (Tripartite tricarboxylate transporter TctA family protein n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A1Y5TFQ6_9RHOB)

HSP 1 Score: 489 bits (1258), Expect = 1.970e-169
Identity = 257/325 (79.08%), Postives = 289/325 (88.92%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGV 975
            LDGYPLAQQGKAGKALNMALYSS TGDFISNLSLIF+AAPLA+LALR+GPPEYFMLM+FAL+TVAGVSG SLLLGL+SA LGLLLATVGED+YGSFRF  T +MQ+GL+VAPVLIGLFA+PEL+K+IVFR        +LGD  VTR E   +LK++L+GS IGVV+GAIPGIGPSAAAF SYGEAQRSSKN ENFGKGELEGIAASESANNG CG+TMIPLLALGVPGDVITGVMLGAFMI G+TPGP+LF+ N+HEVYMLFIGML SSVLLFGAGK TMR FS++S IP  L+ P+VL LCLFGI+SIS+SM+DV +LL MGV
Sbjct:   93 LDGYPLAQQGKAGKALNMALYSSVTGDFISNLSLIFLAAPLAVLALRVGPPEYFMLMLFALSTVAGVSGNSLLLGLISAALGLLLATVGEDLYGSFRFAFTDNMQAGLSVAPVLIGLFALPELIKLIVFRAASRDIAAKLGDQSVTRAEFMGSLKSILRGSSIGVVLGAIPGIGPSAAAFFSYGEAQRSSKNGENFGKGELEGIAASESANNGACGATMIPLLALGVPGDVITGVMLGAFMIQGLTPGPLLFQTNIHEVYMLFIGMLMSSVLLFGAGKMTMRMFSYVSHIPQTLLTPVVLLLCLFGIYSISSSMFDVAILLIMGV 417
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: A0A1I5HWC8_9HYPH (Putative tricarboxylic transport membrane protein n=3 Tax=Cohaesibacter TaxID=655352 RepID=A0A1I5HWC8_9HYPH)

HSP 1 Score: 484 bits (1245), Expect = 1.850e-167
Identity = 250/325 (76.92%), Postives = 290/325 (89.23%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGV 975
            LDGYPLA+QGKAGKALNMALYSS  GDFISNLSLIF+AAPLA+LALR+GPPEYFMLM+FALTTVAGVSG SLLLGL+SA  GLLLAT GED+YGSFRF  T DMQ+GL+VAPVLIGLFA+PELLK+IVFR    ++  +LGD +V+R E   ++K++L+GS+IG V+GAIPGIGPSAAAF SYGEAQR+SKN +NFGKGELEGIAASESANNG CG+TMIPLLALGVPGDVITGVMLGAFMI G+TPGP+LF+ N+HEVYMLFIGMLFSSVLLF AGK  MR FSH++R+P  L+AP+VL LCLFGI+SI++SM+DV +LL MGV
Sbjct:   93 LDGYPLARQGKAGKALNMALYSSVIGDFISNLSLIFLAAPLAILALRVGPPEYFMLMLFALTTVAGVSGNSLLLGLISATFGLLLATAGEDLYGSFRFAFTDDMQAGLSVAPVLIGLFALPELLKLIVFRAAHKNEAAKLGDQKVSRSEFIGSVKSILRGSVIGAVLGAIPGIGPSAAAFFSYGEAQRTSKNGDNFGKGELEGIAASESANNGACGATMIPLLALGVPGDVITGVMLGAFMIQGLTPGPLLFQTNIHEVYMLFIGMLFSSVLLFFAGKVIMRGFSHVARVPQSLLAPVVLLLCLFGIYSIASSMFDVAILLIMGV 417
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: UPI001ADF5D40 (tripartite tricarboxylate transporter permease n=1 Tax=Pararhodobacter sp. SW119 TaxID=2780075 RepID=UPI001ADF5D40)

HSP 1 Score: 483 bits (1243), Expect = 4.130e-167
Identity = 246/325 (75.69%), Postives = 291/325 (89.54%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMGV 975
            LDGYPLAQ+GK+GKALNMALYSS  GDF+SN+SLIF+AAPLALLALR+GPPE+FMLM+FALTTVAGVSG SLLLGLVSAC GLLLATVG+DMYGSFRF LT DMQ+GLAVAPVLIGLFA+PELLK++VFR  ++ +PMQ+G +RV+  E R   K++L+GS IGVV+GAIPGIGPSAAAF SYGEAQR+SK+ E FGKG LEGIAASESANNG CG+TMIPLLALG+PGDVITGVMLGAF+IHG++PGP+LF+ N++E+YMLFIGMLFSS+ LFGAGK T+  FS I+R+P  L+ P+VL LC+FGI+SIS+SM+DV VLL MGV
Sbjct:   93 LDGYPLAQKGKSGKALNMALYSSVFGDFVSNISLIFLAAPLALLALRVGPPEFFMLMLFALTTVAGVSGNSLLLGLVSACFGLLLATVGQDMYGSFRFSLTTDMQAGLAVAPVLIGLFALPELLKLVVFRAARNTEPMQVGYDRVSAAEFRAVFKSLLRGSGIGVVLGAIPGIGPSAAAFFSYGEAQRTSKHPEEFGKGSLEGIAASESANNGACGATMIPLLALGIPGDVITGVMLGAFLIHGLSPGPLLFQTNINEIYMLFIGMLFSSIFLFGAGKITIPMFSSIARVPASLLTPVVLTLCIFGIYSISSSMFDVAVLLVMGV 417
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Match: X7ECJ2_9RHOB (C4-dicarboxylate ABC transporter permease n=1 Tax=Roseivivax halodurans JCM 10272 TaxID=1449350 RepID=X7ECJ2_9RHOB)

HSP 1 Score: 481 bits (1239), Expect = 1.670e-166
Identity = 247/324 (76.23%), Postives = 284/324 (87.65%), Query Frame = 1 
Query:    1 LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGPPEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDLTVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDELRRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGELEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPMLFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVLALCLFGIFSISNSMYDVIVLLAMG 972
            LDGYPLAQQGKAGKALNMALYSS  GDF SN+SLIF+AAPLA+LAL++GPPEYFMLMVFALTTVAGVSG SLL+GL+SAC GLLLAT GEDMYGSFRF  T DMQ+GL+VAPVLIGLFA+PEL+K+IVFRN    + M LGD+RV+  E R   KT+ +GS IGV++GAIPGIGPSAAAF SYG AQRSS   +NFGKGE+EG+AASESANNG CG+TMIPLLALGVPGDVITGVMLGAFMI G+TPGP+LFE N+HEVYMLFIGML SSVLL  AGK TMR F+ I++IPP L++P+VL LCLFGI++I NSM+DV+VLLA+G
Sbjct:   93 LDGYPLAQQGKAGKALNMALYSSVVGDFFSNISLIFLAAPLAILALKVGPPEYFMLMVFALTTVAGVSGNSLLMGLLSACFGLLLATAGEDMYGSFRFAFTGDMQAGLSVAPVLIGLFALPELIKLIVFRNPPKARAMALGDDRVSGKEFRGVAKTLFRGSFIGVILGAIPGIGPSAAAFFSYGSAQRSSPRGQNFGKGEIEGVAASESANNGACGATMIPLLALGVPGDVITGVMLGAFMIQGLTPGPLLFETNIHEVYMLFIGMLLSSVLLLFAGKFTMRIFTTIAKIPPTLLSPVVLLLCLFGIYAIGNSMFDVVVLLALG 416
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15351.3100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D5LY65_9GAMM4.020e-20493.56Uncharacterized protein n=34 Tax=Bacteria TaxID=2 ... [more]
A0A1H3CW56_9GAMM2.280e-19687.73Putative tricarboxylic transport membrane protein ... [more]
A0A5B8JA17_9RHOB3.500e-17379.38C4-dicarboxylate ABC transporter permease n=1 Tax=... [more]
UPI0018E5FDCB4.960e-17379.08tripartite tricarboxylate transporter permease n=1... [more]
UPI000AAD04091.780e-17178.15tripartite tricarboxylate transporter permease n=1... [more]
I5C6G0_9HYPH2.400e-17178.15Uncharacterized protein n=8 Tax=Proteobacteria Tax... [more]
A0A1Y5TFQ6_9RHOB1.970e-16979.08Tripartite tricarboxylate transporter TctA family ... [more]
A0A1I5HWC8_9HYPH1.850e-16776.92Putative tricarboxylic transport membrane protein ... [more]
UPI001ADF5D404.130e-16775.69tripartite tricarboxylate transporter permease n=1... [more]
X7ECJ2_9RHOB1.670e-16676.23C4-dicarboxylate ABC transporter permease n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15351contigE-siliculosus-1a_F_contig15351:2..979 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size978
Model size978
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.S
EggNOG OGs1MUKR@1224,1RMQB@1236,1XIF1@135619,COG3333@1,COG3333@2
EggNOG free text desc.Tripartite tricarboxylate transporter TctA family
KEGG Pathwayko02020,map02020
KEGG TC2.A.80.1
KEGG koko:K07793
Seed eggNOG ortholog1504981.KO116_1238
Seed ortholog evalue4.2e-162
Seed ortholog score577.4
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928043.9152586-CDS-E-siliculosus-1a_F_contig15351:1..9791622928043.9152586-CDS-E-siliculosus-1a_F_contig15351:1..979Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15351 2..979 -
1696318785.427728-CDS-E-siliculosus-1a_F_contig15351:1..9791696318785.427728-CDS-E-siliculosus-1a_F_contig15351:1..979Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15351 2..979 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15351.3100.1prot_E-siliculosus-1a_F_contig15351.3100.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15351 2..979 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15351.3100.1

>prot_E-siliculosus-1a_F_contig15351.3100.1 ID=prot_E-siliculosus-1a_F_contig15351.3100.1|Name=mRNA_E-siliculosus-1a_F_contig15351.3100.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=326bp
LDGYPLAQQGKAGKALNMALYSSCTGDFISNLSLIFIAAPLALLALRIGP
PEYFMLMVFALTTVAGVSGRSLLLGLVSACLGLLLATVGEDMYGSFRFDL
TVDMQSGLAVAPVLIGLFAIPELLKIIVFRNNQSHKPMQLGDNRVTRDEL
RRTLKTMLKGSMIGVVMGAIPGIGPSAAAFSSYGEAQRSSKNRENFGKGE
LEGIAASESANNGCCGSTMIPLLALGVPGDVITGVMLGAFMIHGMTPGPM
LFENNLHEVYMLFIGMLFSSVLLFGAGKATMRFFSHISRIPPGLMAPIVL
ALCLFGIFSISNSMYDVIVLLAMGVF
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mRNA from alignment at E-siliculosus-1a_F_contig15351:2..979-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15351.3100.1 ID=mRNA_E-siliculosus-1a_F_contig15351.3100.1|Name=mRNA_E-siliculosus-1a_F_contig15351.3100.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=978bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15351:2..979- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTTGACGGCTACCCATTGGCCCAACAGGGCAAGGCAGGCAAAGCGCTCAA
CATGGCGCTCTACTCCTCCTGTACCGGCGACTTTATTTCCAATCTTTCAC
TGATTTTTATTGCCGCACCTCTTGCGCTTCTCGCGCTGCGTATTGGGCCC
CCCGAATACTTTATGCTGATGGTTTTCGCGCTTACCACCGTGGCTGGGGT
TTCAGGTCGTTCGCTGTTGCTTGGACTTGTGTCAGCATGTTTAGGGCTAC
TGTTAGCCACCGTAGGCGAGGATATGTACGGCTCGTTCCGCTTTGATCTT
ACCGTGGATATGCAGAGCGGGCTTGCCGTTGCACCCGTGCTAATCGGCCT
GTTTGCGATCCCGGAACTGCTTAAGATCATTGTCTTCCGTAATAATCAAA
GCCATAAGCCCATGCAGCTCGGTGATAATCGCGTAACACGAGATGAGCTG
CGGCGAACGTTAAAAACAATGCTCAAAGGCAGCATGATTGGCGTCGTTAT
GGGAGCCATCCCCGGCATTGGTCCCTCTGCAGCGGCTTTCTCTTCCTACG
GCGAAGCACAGCGCAGCTCTAAAAACCGCGAGAACTTTGGTAAAGGCGAG
TTAGAAGGGATCGCAGCGTCAGAGTCTGCTAACAATGGCTGCTGTGGCTC
CACCATGATTCCGCTGTTAGCGCTGGGTGTGCCGGGTGATGTGATTACCG
GCGTAATGCTAGGTGCCTTTATGATTCATGGCATGACACCAGGCCCGATG
CTGTTTGAGAATAATCTGCATGAGGTGTACATGCTGTTTATTGGCATGCT
GTTCTCATCTGTTTTGCTGTTTGGTGCCGGTAAAGCAACGATGCGCTTTT
TCTCGCACATCTCACGCATTCCTCCCGGATTAATGGCGCCGATCGTGCTG
GCTCTTTGCCTATTTGGTATTTTTTCAATCTCCAACAGCATGTATGACGT
CATCGTACTACTGGCGATGGGCGTATTC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15351:2..979-

>mRNA_E-siliculosus-1a_F_contig15351.3100.1 ID=mRNA_E-siliculosus-1a_F_contig15351.3100.1|Name=mRNA_E-siliculosus-1a_F_contig15351.3100.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1956bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15351:2..979- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTTGACGGCTACCCATTGGCCCAACAGGGCAAGGCAGGCAAAGCGCTCAA
CATGGCGCTCTACTCCTCCTGTACCGGCGACTTTATTTCCAATCTTTCAC
TGATTTTTATTGCCGCACCTCTTGCGCTTCTCGCGCTGCGTATTGGGCCC
CCCGAATACTTTATGCTGATGGTTTTCGCGCTTACCACCGTGGCTGGGGT
TTCAGGTCGTTCGCTGTTGCTTGGACTTGTGTCAGCATGTTTAGGGCTAC
TGTTAGCCACCGTAGGCGAGGATATGTACGGCTCGTTCCGCTTTGATCTT
ACCGTGGATATGCAGAGCGGGCTTGCCGTTGCACCCGTGCTAATCGGCCT
GTTTGCGATCCCGGAACTGCTTAAGATCATTGTCTTCCGTAATAATCAAA
GCCATAAGCCCATGCAGCTCGGTGATAATCGCGTAACACGAGATGAGCTG
CGGCGAACGTTAAAAACAATGCTCAAAGGCAGCATGATTGGCGTCGTTAT
GGGAGCCATCCCCGGCATTGGTCCCTCTGCAGCGGCTTTCTCTTCCTACG
GCGAAGCACAGCGCAGCTCTAAAAACCGCGAGAACTTTGGTAAAGGCGAG
TTAGAAGGGATCGCAGCGTCAGAGTCTGCTAACAATGGCTGCTGTGGCTC
CACCATGATTCCGCTGTTAGCGCTGGGTGTGCCGGGTGATGTGATTACCG
GCGTAATGCTAGGTGCCTTTATGATTCATGGCATGACACCAGGCCCGATG
CTGTTTGAGAATAATCTGCATGAGGTGTACATGCTGTTTATTGGCATGCT
GTTCTCATCTGTTTTGCTGTTTGGTGCCGGTAAAGCAACGATGCGCTTTT
TCTCGCACATCTCACGCATTCCTCCCGGATTAATGGCGCCGATCGTGCTG
GCTCTTTGCCTATTTGGTATTTTTTCAATCTCCAACAGCATGTATGACGT
CATCGTACTACTGGCGATGGGCGTATTCCTTGACGGCTACCCATTGGCCC
AACAGGGCAAGGCAGGCAAAGCGCTCAACATGGCGCTCTACTCCTCCTGT
ACCGGCGACTTTATTTCCAATCTTTCACTGATTTTTATTGCCGCACCTCT
TGCGCTTCTCGCGCTGCGTATTGGGCCCCCCGAATACTTTATGCTGATGG
TTTTCGCGCTTACCACCGTGGCTGGGGTTTCAGGTCGTTCGCTGTTGCTT
GGACTTGTGTCAGCATGTTTAGGGCTACTGTTAGCCACCGTAGGCGAGGA
TATGTACGGCTCGTTCCGCTTTGATCTTACCGTGGATATGCAGAGCGGGC
TTGCCGTTGCACCCGTGCTAATCGGCCTGTTTGCGATCCCGGAACTGCTT
AAGATCATTGTCTTCCGTAATAATCAAAGCCATAAGCCCATGCAGCTCGG
TGATAATCGCGTAACACGAGATGAGCTGCGGCGAACGTTAAAAACAATGC
TCAAAGGCAGCATGATTGGCGTCGTTATGGGAGCCATCCCCGGCATTGGT
CCCTCTGCAGCGGCTTTCTCTTCCTACGGCGAAGCACAGCGCAGCTCTAA
AAACCGCGAGAACTTTGGTAAAGGCGAGTTAGAAGGGATCGCAGCGTCAG
AGTCTGCTAACAATGGCTGCTGTGGCTCCACCATGATTCCGCTGTTAGCG
CTGGGTGTGCCGGGTGATGTGATTACCGGCGTAATGCTAGGTGCCTTTAT
GATTCATGGCATGACACCAGGCCCGATGCTGTTTGAGAATAATCTGCATG
AGGTGTACATGCTGTTTATTGGCATGCTGTTCTCATCTGTTTTGCTGTTT
GGTGCCGGTAAAGCAACGATGCGCTTTTTCTCGCACATCTCACGCATTCC
TCCCGGATTAATGGCGCCGATCGTGCTGGCTCTTTGCCTATTTGGTATTT
TTTCAATCTCCAACAGCATGTATGACGTCATCGTACTACTGGCGATGGGC
GTATTC
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