mRNA_E-siliculosus-1a_F_contig1534.3095.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1534.3095.1
Unique NamemRNA_E-siliculosus-1a_F_contig1534.3095.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 7.050e-158
Identity = 222/238 (93.28%), Postives = 229/238 (96.22%), Query Frame = 1 
Query:    1 RDSRPLLAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADTNDFRPSVKIIIGILRRRLGLRRTR 714
            R SRP +AGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANV+PLDREFFLTTKCTLYISGHGSEERISLLPL DEE+GVVV MHCFE+HQEHLLPENAEFCQAL+DQY GYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVP AQLEEMQRKSLEAYGRMFGAD NDFRPS +II+GILRRRLG RRTR
Sbjct:    6 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGHRRTR 243
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 1.990e-154
Identity = 218/234 (93.16%), Postives = 226/234 (96.58%), Query Frame = 1 
Query:    1 RDSRPLLAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADTNDFRPSVKIIIGILRRRLGL 702
            R SRP +AGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLY+SGHGSEERISLLPL DEEHGVVV MHCFE+HQEHLLPENAEFCQAL+DQY GYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAG+IPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMM TLLAVPRAQLEEMQRKSLEAYG+MFGAD NDFRPS KII+GI+RRRLGL
Sbjct:  191 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRLGL 424
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 1.020e-113
Identity = 168/238 (70.59%), Postives = 198/238 (83.19%), Query Frame = 1 
Query:    1 RDSRPLLAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADTNDFRPSVKIIIGILRRRLGLRRTR 714
            RDSRP +AGS+AMEAATNMHTCFYRSGYDISVPLAP+ V +DLA+V P DR FFLTTK +LY+SGHGS ER+SL+PL DE +GV++++HCFE H+EHLLPEN E+C+AL DQY  + Y SLMN+TFGLVPAGR P TYRLGEVMSAGSIPVFVG DLVPPF E IDW S SFAF PD+VES+M+ TL AVPRA+LE+MQRKSLEAY R+FG +  DF    +I++  L+RRL  R TR
Sbjct:  194 RDSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRLEHRMTR 431
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 6.610e-105
Identity = 156/238 (65.55%), Postives = 193/238 (81.09%), Query Frame = 1 
Query:    1 RDSRPLLAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADTNDFRPSVKIIIGILRRRLGLRRTR 714
            R SRP++AGS+AMEAA+NM TCFYRSG+DISVPL  ++  ++LA+VA  DR FFLTTK +LY+S HGS ER+SL+PL DE +GV++++HCFE H EHLLPEN E+C+AL D+YG + Y SLMNSTFGLVPAGR P T+RLGEVMSAGSIPVFVG DLV PF E IDW S SFAF PD+V  +M+ TL AVPRA+LE+MQRKSL+A+ ++FG D   F PS +I++ IL+RRLG R  R
Sbjct:   98 RGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSARIMLKILQRRLGHRMAR 335
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 1.570e-104
Identity = 153/226 (67.70%), Postives = 185/226 (81.86%), Query Frame = 1 
Query:   37 MEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADTNDFRPSVKIIIGILRRRLGLRRTR 714
            MEAA+NMHTCFYRSG+DISVPL   +  ++LA+VA  DR FFLTTK TLY+SGHGS ER+SL+PL DE +GV++++HCFE H EHLLPEN E+C+AL D+YG + Y SLMNSTFGLVPAGR P TYRLGEVMSAGSIPVFVG DLV PF E IDW S SFAF PD+V  +M+ TL AVPRA+LE+MQRKSL+A+G++FG D + F PS +I++ IL+RRLG R  R
Sbjct:    1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSARIMLEILQRRLGHRMAR 226
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: D7G4H4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H4_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 2.240e-87
Identity = 135/177 (76.27%), Postives = 146/177 (82.49%), Query Frame = 1 
Query:   73 RSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTL--YISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQ 597
            R+GYDISVPLAPR V HDLA VAP DR FFLTT C+L  Y+  HGSEE + L+PL D+E+GV ++MHCFE HQ+HLLPEN EF QA  D Y G DYRSLMNSTFGLVPAG    TYRLGEVMSAGSIPVFVGRDLVP FMEQIDW SISFAFTPDEV+SR MSTLLAVPR QLE MQ
Sbjct:    6 RTGYDISVPLAPRHVFHDLAKVAPWDRRFFLTTTCSLPGYLGEHGSEEWMGLIPLQDKENGVNLSMHCFENHQDHLLPENPEFRQAQTDHYQGQDYRSLMNSTFGLVPAGWSSGTYRLGEVMSAGSIPVFVGRDLVPSFMEQIDWNSISFAFTPDEVKSRTMSTLLAVPREQLERMQ 182
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 5.900e-78
Identity = 126/236 (53.39%), Postives = 172/236 (72.88%), Query Frame = 1 
Query:    1 RDSRPLLAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADTNDFRPSVKIIIGILRRRLGLRR 708
            RD +PL+AGS AM+A++NM +CFYRSGYD +VPL  +    +L  +AP  R++FLT K  LY+SG G +ER+S++PLH E  GV++ ++CFE H EHLLPEN EFC AL +    ++Y  LMN+TFGLVPAGR PATYRL EVMSAG+IPVFV RD+V PF E++DWP++SF+F P+EV   MM TL +V  A+L  MQRKS++A+  +FG +    R + ++++  L  R+G  R
Sbjct:  302 RDKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEPGYDRIA-RVVVDELVLRVGYHR 536
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 4.080e-69
Identity = 115/213 (53.99%), Postives = 150/213 (70.42%), Query Frame = 1 
Query:    7 SRPLLAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQRKSLEAYGRMFGADTN 645
            +RP ++ ++AM+ + +  +C+YRSGYD+S+PL P +V  D A     DR++FLT K TLY+ G+G EER ++  +HD  +GVV  + C   H +  LPEN ++CQ  R +Y  YDY  LMN+TF LVPAGR P ++RLGEVMSAG+IPVFV RD + PF EQIDWPS SF F+PD+V   MM TL AV  AQL EMQRKSL AY ++FG  TN
Sbjct:  296 ARPHISNTYAMDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGGVTN 508
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 9.290e-62
Identity = 100/179 (55.87%), Postives = 126/179 (70.39%), Query Frame = 1 
Query:   61 TCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQ 597
            +C+YRSGYD+S+PL P +V  D A     DR++FLT K TLY+ G+G EER ++   HD  +GVV  + C   H + +LPEN ++CQ  R +Y  YDY  LMN+TF LVPAGR P ++RLGEVMSAG+IPVFV RD + PF EQIDWPS SF F+PD+V   MM TL AV  A+L EMQ
Sbjct:    9 SCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187
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BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Match: UPI000D16496E (exostosin-1c-like isoform X2 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=UPI000D16496E)

HSP 1 Score: 109 bits (273), Expect = 4.590e-25
Identity = 73/199 (36.68%), Postives = 105/199 (52.76%), Query Frame = 1 
Query:   25 GSFAMEA--ATNMHTCFYRSGYDISVPLAPRQV--LHDLANVAPLDREFFLTTKCTLYISGHGSEERIS-LLPLHDEEHGVVVAM--HCFEKHQEHLLPENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQR 600
            GS  M +  +T +H   YR G+DI++PL  R V  +  L+ + P +R++FLT K T Y+S  G     S    +HD +  VVV    H          P     C   +  +  YD+  L+N+TFGL PAGR PA+YR+ EV+SAG+IPV V  + V PF   I W      F   E+  R++ TL A+ + ++E  QR
Sbjct:   64 GSIGMASILSTELHDTTYRPGFDIAIPLPRRNVNVITGLSELKPFERKYFLTFKGTRYLSREGKFRSGSEFRGMHDGKDVVVVTTCDHGTNNKLRLWQPWRGAGCAEDQTVFDSYDFMELLNTTFGLAPAGRSPASYRMLEVLSAGAIPVLVADNYVKPFETLIKWQRCLLQFPTSEIH-RIVPTLRALSKKEVEMRQR 261
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1534.3095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4H7_ECTSI7.050e-15893.28Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5KKV6_9PHAE1.990e-15493.16GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JGQ8_9PHAE1.020e-11370.59GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI6.610e-10565.55Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H3_ECTSI1.570e-10467.70Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H4_ECTSI2.240e-8776.27Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JRU9_9PHAE5.900e-7853.39GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5L9T2_9PHAE4.080e-6953.99GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LQY4_ECTSI9.290e-6255.87Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
UPI000D16496E4.590e-2536.68exostosin-1c-like isoform X2 n=1 Tax=Physcomitrium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1534contigE-siliculosus-1a_F_contig1534:8688..10733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size717
Model size717
Exons3
Ec32 orthologEc-07_000580.1
Ec32 ortholog descriptionGlycosyltransferase, family GT47
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
CAZyGT47,GT64
COG Functional cat.S
EC2.4.1.224,2.4.1.225
EggNOG OGsKOG1021@1,KOG1021@2759
EggNOG free text desc.macromolecule glycosylation
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
KEGG ModuleM00059
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ReactionR05935,R05936,R10138,R10139
KEGG TC1.A.17.4
KEGG koko:K02366,ko:K02368,ko:K21988
Preferred nameEXTL1
Seed eggNOG ortholog2880.D7G4H7
Seed ortholog evalue3.3e-124
Seed ortholog score451.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1534.3095.1prot_E-siliculosus-1a_F_contig1534.3095.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1534 8688..10733 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928043.1894715-CDS-E-siliculosus-1a_F_contig1534:8687..88611622928043.1894715-CDS-E-siliculosus-1a_F_contig1534:8687..8861Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1534 8688..8861 +
1696318785.1911893-CDS-E-siliculosus-1a_F_contig1534:8687..88611696318785.1911893-CDS-E-siliculosus-1a_F_contig1534:8687..8861Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1534 8688..8861 +
1622928043.2010784-CDS-E-siliculosus-1a_F_contig1534:9490..99131622928043.2010784-CDS-E-siliculosus-1a_F_contig1534:9490..9913Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1534 9491..9913 +
1696318785.2009456-CDS-E-siliculosus-1a_F_contig1534:9490..99131696318785.2009456-CDS-E-siliculosus-1a_F_contig1534:9490..9913Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1534 9491..9913 +
1622928043.2130022-CDS-E-siliculosus-1a_F_contig1534:10613..107331622928043.2130022-CDS-E-siliculosus-1a_F_contig1534:10613..10733Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1534 10614..10733 +
1696318785.2081287-CDS-E-siliculosus-1a_F_contig1534:10613..107331696318785.2081287-CDS-E-siliculosus-1a_F_contig1534:10613..10733Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1534 10614..10733 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1534.3095.1

>prot_E-siliculosus-1a_F_contig1534.3095.1 ID=prot_E-siliculosus-1a_F_contig1534.3095.1|Name=mRNA_E-siliculosus-1a_F_contig1534.3095.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=239bp
RDSRPLLAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLD
REFFLTTKCTLYISGHGSEERISLLPLHDEEHGVVVAMHCFEKHQEHLLP
ENAEFCQALRDQYGGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIP
VFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPRAQLEEMQR
KSLEAYGRMFGADTNDFRPSVKIIIGILRRRLGLRRTR*
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mRNA from alignment at E-siliculosus-1a_F_contig1534:8688..10733+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1534.3095.1 ID=mRNA_E-siliculosus-1a_F_contig1534.3095.1|Name=mRNA_E-siliculosus-1a_F_contig1534.3095.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2046bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1534:8688..10733+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGGGATTCGCGGCCCCTGTTGGCTGGTAGTTTTGCCATGGAGGCGGCCAC
CAACATGCACACGTGTTTCTACAGGAGTGGCTACGACATTTCAGTCCCTC
TTGCTCCCCGACAAGTGCTCCACGATCTGGCCAACGTTGCCCCTCTGGAT
CGGGAGTTCTTCCTAACAACAAAGGTAGGTGCTGTAGGTGTTGTGTGGTT
CGATTGCTGTTGATTATTTTCTTGCCAGTGCTGCTGCAGGTGTTGTTTGT
GAACCGAAAGCCGATGTGACCATCTCAACACCTTCAGCACTCCCATTATT
GCACTTGTTGCACACGTCGCTTGCGTGTTTTCGTCGGGGATTTCGAGCGT
CGTGTGTGTGGGCATCAACAGTCCGTTCCGCCCAAAACATTGCTTGGTAC
AGACTTACTGTGAAATATCTTCCAGCCGGTGGGTCGGACGAATACATACT
TGATTTCACCGCTAATTCTGACAGACGAATTCAATCACACGATCATAACG
TGTCATTGCTGACCCAAATAATATCCGTTTCACCTAATGTACCACATGAT
ATGCATACGCGGGTTACGGAATTCGGCCAACCTACACGTGCCCAAGCAGG
TATGTTCCGGCTCACACCCTGACCTGTAAAGACCAACCACAATATCATCA
AGTCAACGCTGTTGCTATTCGTGACCACAGCACAAAAATTTTGATGTTTC
ATACCAGCAATGCTGGTTGCACCTGAGGAGTAATACATAATGATTCTCAA
CTCTGCGACGCCCGTTCACCACGTCTGTACTTTGTGATTGCGCTATATAC
CAGTGCACGTTATATATTAGCGGCCACGGTTCGGAGGAAAGGATTAGTCT
TTTACCGCTGCACGACGAAGAACACGGCGTGGTGGTAGCCATGCACTGCT
TCGAGAAACACCAAGAGCATCTACTTCCAGAGAATGCCGAGTTCTGCCAA
GCGCTGAGAGACCAGTATGGAGGCTACGACTACCGGAGCCTAATGAACTC
GACGTTCGGGCTGGTACCAGCTGGACGGGGTCCCGCCACGTACCGCCTCG
GGGAAGTGATGAGCGCCGGGTCGATCCCCGTATTCGTTGGCCGGGACCTA
GTTCCTCCGTTCATGGAACAAATCGACTGGCCTTCGATTTCTTTCGCGTT
TACGCCGGACGAAGTGGAGTCGCGCATGATGAGCACGTTACTGGCGGTTC
CACGAGCGCAGCTAGAGGAAATGCAGGTATACCTATGTGAGCAACATGGA
TCGAATGAGATGGGCAGCGATGAGTAGCCCCCGGTGTTCCCCGCCGTAAT
GAGTGTAGAGAAATGGTGCATCGTTCCTTTCACATGCGCCCCTTGCGGCG
GAAACAAAGATCGCAGTGCCCACACCACGCCATATGGATGGTGAACAGGC
ATGGGCGGGTGTGTACTGTACCAAGGTTGCAGAATGAATGTTCGTTTCTT
CGGGGAGCATTGCAATGACCCACAAGCAAAGTTATTGCATATTCTGCCGT
CCCCATACCCCCCTTATCATCTAAGCCACGCCCTAGAACACTTCCACGGT
CATGACAAACGATGCGTATCGGTCCCGGGTTCCCAAGAGGGGGGGGGGGG
AGGAAGTAGATTTGAAATACTTGGCGTTGACTGTGCGGGGCGAGTCCTAG
CACAAGGTACTAGCACTATATTTCAAGCGTACCCCTTCTCCGTTGACGCA
AATTCGACTGTTCAATCGAAATGTGATTGTATTGAACGGAGCTTTGACTT
CACTCGCATCAGCTGGCTAAACTGGGCCAGTACGTACGTGATCATTTTCT
CTACATGTCGGAGCTACATCCCTCATACTGCCAATCCTCGGCAAGATGTT
CGAACATGTGACCGTCCCGCACCGTCCGTTTTCGTTTCATATGCCATGTG
ACATCGGCAACGAAATTGCCACAAAGCGCAAGTCGCTCGAGGCCTATGGG
AGGATGTTCGGGGCGGACACGAACGACTTCCGCCCAAGCGTTAAAATCAT
AATTGGCATTCTTCGTAGGCGGCTAGGACTCCGGCGGACGCGATGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1534:8688..10733+

>mRNA_E-siliculosus-1a_F_contig1534.3095.1 ID=mRNA_E-siliculosus-1a_F_contig1534.3095.1|Name=mRNA_E-siliculosus-1a_F_contig1534.3095.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1434bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1534:8688..10733+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGGGATTCGCGGCCCCTGTTGGCTGGTAGTTTTGCCATGGAGGCGGCCAC
CAACATGCACACGTGTTTCTACAGGAGTGGCTACGACATTTCAGTCCCTC
TTGCTCCCCGACAAGTGCTCCACGATCTGGCCAACGTTGCCCCTCTGGAT
CGGGAGTTCTTCCTAACAACAAAGAGGGATTCGCGGCCCCTGTTGGCTGG
TAGTTTTGCCATGGAGGCGGCCACCAACATGCACACGTGTTTCTACAGGA
GTGGCTACGACATTTCAGTCCCTCTTGCTCCCCGACAAGTGCTCCACGAT
CTGGCCAACGTTGCCCCTCTGGATCGGGAGTTCTTCCTAACAACAAAGTG
CACGTTATATATTAGCGGCCACGGTTCGGAGGAAAGGATTAGTCTTTTAC
CGCTGCACGACGAAGAACACGGCGTGGTGGTAGCCATGCACTGCTTCGAG
AAACACCAAGAGCATCTACTTCCAGAGAATGCCGAGTTCTGCCAAGCGCT
GAGAGACCAGTATGGAGGCTACGACTACCGGAGCCTAATGAACTCGACGT
TCGGGCTGGTACCAGCTGGACGGGGTCCCGCCACGTACCGCCTCGGGGAA
GTGATGAGCGCCGGGTCGATCCCCGTATTCGTTGGCCGGGACCTAGTTCC
TCCGTTCATGGAACAAATCGACTGGCCTTCGATTTCTTTCGCGTTTACGC
CGGACGAAGTGGAGTCGCGCATGATGAGCACGTTACTGGCGGTTCCACGA
GCGCAGCTAGAGGAAATGCAGTGCACGTTATATATTAGCGGCCACGGTTC
GGAGGAAAGGATTAGTCTTTTACCGCTGCACGACGAAGAACACGGCGTGG
TGGTAGCCATGCACTGCTTCGAGAAACACCAAGAGCATCTACTTCCAGAG
AATGCCGAGTTCTGCCAAGCGCTGAGAGACCAGTATGGAGGCTACGACTA
CCGGAGCCTAATGAACTCGACGTTCGGGCTGGTACCAGCTGGACGGGGTC
CCGCCACGTACCGCCTCGGGGAAGTGATGAGCGCCGGGTCGATCCCCGTA
TTCGTTGGCCGGGACCTAGTTCCTCCGTTCATGGAACAAATCGACTGGCC
TTCGATTTCTTTCGCGTTTACGCCGGACGAAGTGGAGTCGCGCATGATGA
GCACGTTACTGGCGGTTCCACGAGCGCAGCTAGAGGAAATGCAGCGCAAG
TCGCTCGAGGCCTATGGGAGGATGTTCGGGGCGGACACGAACGACTTCCG
CCCAAGCGTTAAAATCATAATTGGCATTCTTCGTAGGCGGCTAGGACTCC
GGCGGACGCGATGACGCAAGTCGCTCGAGGCCTATGGGAGGATGTTCGGG
GCGGACACGAACGACTTCCGCCCAAGCGTTAAAATCATAATTGGCATTCT
TCGTAGGCGGCTAGGACTCCGGCGGACGCGATGA
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