mRNA_E-siliculosus-1a_F_contig1532.3085.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: D8LH69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH69_ECTSI) HSP 1 Score: 360 bits (925), Expect = 3.130e-124 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK
Sbjct: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 235
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: A0A836C8J3_9STRA (Pre-mRNA-splicing factor Cwf15/Cwc15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J3_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.540e-44 Identity = 140/239 (58.58%), Postives = 164/239 (68.62%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEK----PATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTAHRPTW PA ++ GNW+TGG + Q SA D P LKFR+ GQNSEAEL++RD++ +E E A +EK PA + + + G XXXXXXXXXXXXXXXXXXXXX AL+KELEKIR+ XXXXXXXXXXXXXXXX QEAAM+GN+LL+ + S+SQVKRRWNDDVVFKGQARTEP+ KKRFVNDTIR+DFHR FL KY+K
Sbjct: 1 MTTAHRPTWTPAVGTSNARGNWATGGLSWQ-FSAKDEPGHKKLKFRQLGQNSEAELKRRDLKTVLEAKEENAKEEKRTGRPAAV---HGDAKGGDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALQKELEKIRRXXXXXXXXXXXXXXXXXXXXXQEAAMSGNVLLSMAQSTSQVKRRWNDDVVFKGQARTEPQVKKRFVNDTIRSDFHRSFLKKYVK 235
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: A0A7S2FJV3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJV3_9STRA) HSP 1 Score: 146 bits (369), Expect = 5.340e-40 Identity = 127/245 (51.84%), Postives = 151/245 (61.63%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDE--------GGAGRGRDRLQLLLKEQGDVNLDDV-KKYDDEDXXXXXXXXXXXXXXXXXXXXXXAL-EKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTAHRPTW + ASD GNWS GG+ S S D+P T LK R+ Q + R E+E +E +ALDEK R E GGA L+LK + +V+ + + +KYDD DXXXXXXXXXXXXXXXXXXXXXX L ++ELEKI+ ERE +AA+ GN L+ + SSQVKR+WNDDVVFK QARTEPE KKRFVNDTIRNDFHRRFL K+ K
Sbjct: 1 MTTAHRPTWVAGKGEASDYGNWSLGGKVSGQFSVKDMPGHTKLKMRQGEQIPDFV-----TRDELESAEDKALDEKLKAKKRSALEDSSSSTVLGGA------KPLMLKAE-EVDTERINRKYDDGDXXXXXXXXXXXXXXXXXXXXXXELLQRELEKIKAEREKVRLEKEAEEAAIAEKTASDAALLGNPLMLGATKSSQVKRKWNDDVVFKNQARTEPEAKKRFVNDTIRNDFHRRFLAKFAK 233
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: A0A8K1CHA0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHA0_PYTOL) HSP 1 Score: 145 bits (365), Expect = 2.570e-39 Identity = 129/242 (53.31%), Postives = 156/242 (64.46%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVK----KYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSS---QVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTAHRPTW A + G W +GGQ SQ SA DLP T LK R+ GQ + E+ RD+RAE+E E++ +EK + D+ +L LL + D +K KYDD D XXXXXXXXXXXXXXXXXXX L +ELEKI+KE XXXXXXXXXX +E + GN L TQ+ S+S ++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KY++
Sbjct: 1 MTTAHRPTW-HAAVGQKNEGGWQSGGQVSQQFSARDLPGHTKLKIRQVGQGTANEIELRDLRAELEGREQQYEEEKGKSNNTAQDKLRRLEENKKLLLLGDAEADARESQLKSVASKYDDADDVXXXXXXXXXXXXXXXXXXXAELMRELEKIKKEXXXXXXXXXXXXREAAEKMAREEILQGNPL-TQAASASGTAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYVQ 240
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: A0A2D4BX11_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX11_PYTIN) HSP 1 Score: 141 bits (355), Expect = 8.240e-38 Identity = 136/248 (54.84%), Postives = 162/248 (65.32%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATI------ARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVK----KYDDEDXXXXXXXXXXXXXXXXXXXXXXA-LEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSS--QVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTAHRPTW A S+ G W TGGQ SQ SA DLP T LK R+ GQ + E+ RD+RAE+E E++ +EK RR +E ++ LL + D +K KYDD D XXXXXXXXXXXXXXXXXXX A L +ELEKI+KE XXXXXXXXXXXXXXXX +E + GN L +S+ ++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KY++
Sbjct: 1 MTTAHRPTWHAAVGQKSE-GGWQTGGQVSQQFSARDLPGHTKLKLRQVGQGTANEVEARDLRAELEGREQQYEEEKSKNSDSVQARLRRLEENK------KILLLGDAEADARESQLKSVASKYDDADDVXXXXXXXXXXXXXXXXXXXEAELMRELEKIKKEXXXXXXXXXXXXXXXXXXXXREEILQGNPLTAAQTASANAKMKRRWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLNKYVQ 241
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: K3WMS3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMS3_GLOUD) HSP 1 Score: 139 bits (349), Expect = 6.140e-37 Identity = 120/240 (50.00%), Postives = 149/240 (62.08%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVK----KYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS-SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTAHRPTW A A++ G W GG S+ SA DLP+ LK+R+ GQ + E+ D+RAE+E E + +EK D+ +L LL + D +K KYDD D XXXXXXXXXXXXX L +ELEKI++ XXXXXXXXXXXX + + GN LL QS+ S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL+KYI+
Sbjct: 1 MTTAHRPTWHAAVGQANE-GGWQAGGALSEQFSARDLPAHKKLKYRQVGQGTANEVELLDLRAELEGKEEKYEEEKGKKKDTALDKLRRLEENKKLLLLGDSEADARESQLKSIASKYDDADEIGDSDDSSXXXXXXXXXXXXXXLMRELEKIKRXXXXXXXXXXXXXXXASEQESRVEILQGNPLLQQSSGGSAKMKRRWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLSKYIQ 239
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: D0NV69_PHYIT (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=D0NV69_PHYIT) HSP 1 Score: 137 bits (344), Expect = 3.420e-36 Identity = 110/239 (46.03%), Postives = 137/239 (57.32%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVK----KYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS-SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYI 702
MTTAHRPTW A S+ G W GG+ S VSA DLP+ LK R+ GQ + E+ D+R E+E E + EK D+ ++ LL + D +K KY+D D XXXXXXXXXXXXXXX L +ELEKI++ERE + +E + GN L Q + S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KYI
Sbjct: 1 MTTAHRPTW-HAAVGQSNEGGWHAGGKLSDQVSARDLPAHKRLKMRQVGQGTANEVELLDLREELERKEEKYEVEKGRKKDTAQDKLRRLEENKKILLLGDAEADAKESQLKEVASKYNDADDGAGSEAXXXXXXXXXXXXXXXELMRELEKIKQEREEERLRKEEEARKTVELQSREEILQGNPLTQQQAAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYI 238
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: A0A485KPE0_9STRA (Aste57867_10048 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPE0_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.960e-35 Identity = 117/243 (48.15%), Postives = 147/243 (60.49%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLK--EQGDVNLDDVKKYDD-EDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQS-----NSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTA RPTW A + G W+ GGQ S SA DLP QT LK R+ GQ + EL +D++ E+ + ER+ +EK + + R ++ LLLK E D D V KYDD +D XXXXXXXXXXXXXXXX L +ELEKI+KE XXX X +++E + GN L + + S+ +KR+WNDDVVFK Q+R EPETKKRF+NDTIRNDFHRRFL YI+
Sbjct: 1 MTTAARPTW-HAAVGQKNEGGWNAGGQVSMQFSARDLPGQTKLKTRQIGQGTVDELGMKDLKGELSERERKYEEEKGKEVDTAQQK--MLRLKENKMLLLKGDEWEDRAKDVVAKYDDADDDTRQDSXXXXXXXXXXXXXXXXXLMRELEKIKKEXXXXXLXKEMVDREVEENQRKEEILLGNPLTSAQARNIPSGSATIKRKWNDDVVFKNQSRNEPETKKRFINDTIRNDFHRRFLKTYIQ 240
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: A0A067BVG0_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BVG0_SAPPC) HSP 1 Score: 134 bits (338), Expect = 2.480e-35 Identity = 113/239 (47.28%), Postives = 143/239 (59.83%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLK--EQGDVNLDDVKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSN--SSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTA RPT+ A ++ G W++GGQ S SA DLP T LK R+ GQ + EL +RD+ E+ D ER+ ++K + + + R +D LLLK E D D KYDD D XXXXXXXXXXXXXXX L +ELEKI++ERE XX R ++ + GN L + S+ +KR+WNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL YI+
Sbjct: 1 MTTAARPTFNAAMGKKNE-GGWNSGGQISMQFSARDLPGHTKLKTRQLGQGTSDELAERDLIGELTDRERKYEEDKLKEVD--FAQQKIMRLKDNKTLLLKGDEWEDRAKDVQTKYDDADDDVGDXXXXXXXXXXXXXXXEAELMRELEKIKREREEERLRKEQAXXDEEEKRAKDEVLMGNPLTSAMAPAGSATIKRKWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLKAYIQ 236
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Match: A0A3F2RN91_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RN91_9STRA) HSP 1 Score: 134 bits (337), Expect = 3.790e-35 Identity = 126/253 (49.80%), Postives = 150/253 (59.29%), Query Frame = 1
Query: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRD----RLQLLLKEQ-----GDVNLDD--------VKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS-SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 705
MTTAHRPTW A A++ G W GGQ S VSA DLP LK R+ GQ + E+ D+R E+E E EK GR +D +L+ L K + GDV D KYDD D XXXXXXXXXXXXXX L +ELEKI++E XXXXXXXXXXXX + +E + GN L Q + S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KYI+
Sbjct: 1 MTTAHRPTWHAAVGQANE-GGWQAGGQLSDQVSARDLPGHKHLKMRQVGQGTANEVELLDLRTELERKEETYEVEK-------------GRKKDTALEKLRRLEKNKKILLLGDVETDARESQLKNVASKYDDADDGGDSDGXXXXXXXXXXXXXXAELMRELEKIKQEXXXXXXXXXXXXXXVAEQQSREEVLQGNPLTQQQTAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYIQ 239 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1532.3085.1 >prot_E-siliculosus-1a_F_contig1532.3085.1 ID=prot_E-siliculosus-1a_F_contig1532.3085.1|Name=mRNA_E-siliculosus-1a_F_contig1532.3085.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=236bp MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQback to top mRNA from alignment at E-siliculosus-1a_F_contig1532:2642..5660- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1532.3085.1 ID=mRNA_E-siliculosus-1a_F_contig1532.3085.1|Name=mRNA_E-siliculosus-1a_F_contig1532.3085.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3019bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1532:2642..5660- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1532:2642..5660- >mRNA_E-siliculosus-1a_F_contig1532.3085.1 ID=mRNA_E-siliculosus-1a_F_contig1532.3085.1|Name=mRNA_E-siliculosus-1a_F_contig1532.3085.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1416bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1532:2642..5660- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |