mRNA_E-siliculosus-1a_F_contig15317.3083.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15317.3083.1
Unique NamemRNA_E-siliculosus-1a_F_contig15317.3083.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: A0A5S3PS56_9FLAO (Sensor histidine kinase n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PS56_9FLAO)

HSP 1 Score: 483 bits (1242), Expect = 4.150e-164
Identity = 237/327 (72.48%), Postives = 289/327 (88.38%), Query Frame = 1
Query:    4 YLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            Y+ AL+YHEL+Q LSDTI+KN S+KNL+MLKTK+NHEQQK+ LI ++EKALAKQKNY+YAS+A LL+L  ITLL+RRNEK QK LNKEL  KK  LE+ E ELR IN TKDK+FSIIGHDLRGPIGAF+GL+QL ++GEI + EFL F+PKL +DID+ISFTLNNLLSWGQTQM GTITQP++V ++N VK+N+NLLSEIA  KSIKM++++ +NTLAW+DADQIDIVIRNLMSNALKFTPKNG+VTI ++ + +HW ++VRDTG+GID+ET+D+IF  N+NVTTYGT+ EKGTGLGL+LCKEMVENN GTIWVES ++KGTCFYFT
Sbjct:  359 YINALSYHELFQRLSDTIAKNGSEKNLLMLKTKMNHEQQKKSLIEANEKALAKQKNYVYASLAFLLILAVITLLVRRNEKIQKNLNKELHTKKADLEKNEIELRAINETKDKMFSIIGHDLRGPIGAFQGLLQLLKNGEINQTEFLQFVPKLRTDIDNISFTLNNLLSWGQTQMNGTITQPTVVSLENLVKDNVNLLSEIAGNKSIKMISQLGENTLAWSDADQIDIVIRNLMSNALKFTPKNGMVTIDAKEKSNHWEVSVRDTGVGIDEETRDRIFAKNSNVTTYGTENEKGTGLGLSLCKEMVENNNGTIWVESVLRKGTCFYFT 685          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: A0A3B0TM25_9ZZZZ (Histidine kinase domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0TM25_9ZZZZ)

HSP 1 Score: 472 bits (1214), Expect = 7.000e-160
Identity = 234/327 (71.56%), Postives = 284/327 (86.85%), Query Frame = 1
Query:    4 YLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            Y+ AL YHEL+Q+LSDTI++N S+K+LVMLK  LNHEQQKEDLI  +EKALAKQKNY+YA++AILLVLL ITLL+RR+EKTQK+LNK+L+ KK  LE+ E ELRE N TKDKLFSIIGHDLRGPIGAF+GL+QL ++ EI +KEF+ F+PKL  DIDHISFTLNNLLSWGQTQM G++T+PS+V +++ V +NINLLSEIAD KSIKM++++  NTLAW+D DQIDIVIRNLMSNALKFTPKNG+VTI ++ +   W I +RDTG+GID+ETQ+K+F  N N+TTYGTD EKGTGLGL+LCKEMVE N GTIWVES ++KGTCFYFT
Sbjct:  359 YITALVYHELFQKLSDTIARNGSEKSLVMLKIDLNHEQQKEDLILQNEKALAKQKNYVYATLAILLVLLTITLLVRRSEKTQKSLNKKLNSKKIDLEKSEGELRETNETKDKLFSIIGHDLRGPIGAFQGLLQLLKNDEINQKEFMEFVPKLRKDIDHISFTLNNLLSWGQTQMNGSVTKPSIVSLESLVTDNINLLSEIADAKSIKMISQLSKNTLAWSDTDQIDIVIRNLMSNALKFTPKNGMVTIVAQEKNAFWEICIRDTGVGIDQETQNKLFAKNANITTYGTDNEKGTGLGLSLCKEMVEKNNGTIWVESVLRKGTCFYFT 685          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: A0A2G1YEE0_9FLAO (Histidine kinase n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A2G1YEE0_9FLAO)

HSP 1 Score: 442 bits (1136), Expect = 3.940e-148
Identity = 216/328 (65.85%), Postives = 281/328 (85.67%), Query Frame = 1
Query:    1 SYLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            +Y +AL YHELYQ+LSDT+S+NE+ K+L MLKTKL H++QK  LI  +E+ALA Q+NY+  ++AILL+ + +T+L+ R++K QK LNKEL  KKEALE+ E EL EIN TKDKLFSII HDLRGPIGAF+GL++LF+  EI +KEFL+FIPKLG+D+DHISFTLNNLLSWGQ+QM G++T+PS++ +D+ V +NINLLSEIA  K IK+V+ + +NTLAW+D +QIDIVIRNL+SNALKFTP+NG++TIS++ R DHW I+VRDTG+G++K+TQDKIFV N+N+TTYGT+ EKGTGLGL+LCKEMVE N GTIW ES ++KG+ F+FT
Sbjct:  357 NYADALTYHELYQKLSDTLSRNENSKSLTMLKTKLEHDKQKLALIQENEQALATQRNYVNVALAILLIFIIVTVLVHRSDKIQKRLNKELQSKKEALEKNEGELMEINETKDKLFSIIAHDLRGPIGAFQGLLKLFKDDEIGQKEFLSFIPKLGADLDHISFTLNNLLSWGQSQMNGSVTKPSMISLDSLVSDNINLLSEIAAGKFIKIVSHLPENTLAWSDGNQIDIVIRNLISNALKFTPENGMITISAKERTDHWEISVRDTGVGMNKDTQDKIFVANSNITTYGTNNEKGTGLGLSLCKEMVEKNHGTIWAESILRKGSSFFFT 684          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: UPI00126A4F1B (ATP-binding protein n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI00126A4F1B)

HSP 1 Score: 428 bits (1100), Expect = 1.040e-142
Identity = 211/327 (64.53%), Postives = 265/327 (81.04%), Query Frame = 1
Query:    4 YLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            Y  AL YHELYQ+LSDTIS+ E++K+L +LKTK  HE+QK +LI  +EK LA Q+NY+ A++AILL+ + +T L+ R+EK QK LN+EL +K E LE+ E EL+ IN TKDKLFSI+ HDLRGPIGAF+GL+ L R+GEI   EF+ FIPKL  DIDHISFTLNNLLSWGQ QM G IT+PS+  ID+ V +NINLLSE+A  KSIK+V+ + +NT+AWTD+DQIDIVIRNL+SNA+KFTP NG+VTI S    D+W I+V+DTGIG+D+ETQ+KIF  ++ +TTYGTD EKGTGLGL+LCKEMVE N G IWV+S  ++GTCFYFT
Sbjct:  358 YAAALGYHELYQQLSDTISRIENQKSLSLLKTKSEHEKQKAELILQNEKELATQRNYVNAALAILLIFIVVTYLVHRSEKIQKNLNEELRLKTEILEKNEIELKSINETKDKLFSIVAHDLRGPIGAFQGLLNLLRNGEIKNSEFMDFIPKLAQDIDHISFTLNNLLSWGQAQMNGLITKPSITSIDHLVTDNINLLSEVATNKSIKLVSHIAENTIAWTDSDQIDIVIRNLISNAIKFTPSNGLVTIDSREMNDYWEISVKDTGIGMDRETQEKIFHESSYITTYGTDNEKGTGLGLSLCKEMVEKNNGMIWVDSVPQQGTCFYFT 684          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: A0A1G9J457_9FLAO (Signal transduction histidine kinase n=2 Tax=Kriegella aquimaris TaxID=192904 RepID=A0A1G9J457_9FLAO)

HSP 1 Score: 426 bits (1096), Expect = 4.170e-142
Identity = 208/328 (63.41%), Postives = 270/328 (82.32%), Query Frame = 1
Query:    1 SYLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            ++  AL YHE+YQ+++DT+S+NE+KK+L MLKTKL H++QK +LI  +EKALA+Q+NY+Y ++ IL+V L ITL+++RNE+ Q+ LN EL  K + LE  E+EL E N TKDKLFSIIGHDLRGPIGAF+GL++LF+  EI + EFL FIPKL  DIDHISFTLNNLL+WGQTQM G +T+   + ++N V ENINLLSEIA+ K+IK+VN++  NTL W+D +QIDIVIRNL+SNALKFTPK+GIVTI +  + +HW+I+VRDTG+G++K T   IF  N+N+TTYGT+ EKGTGLGL+LCKEMVENNKGTIWV S ++ G+CFYFT
Sbjct:  357 NFASALKYHEIYQKMTDTLSRNENKKSLTMLKTKLAHDKQKRELIQENEKALAQQRNYVYTALGILIVFLTITLMVKRNERIQRNLNTELKTKTQDLENNEKELTENNLTKDKLFSIIGHDLRGPIGAFQGLLKLFKDNEIDQNEFLNFIPKLRMDIDHISFTLNNLLTWGQTQMNGAVTKQESIALENLVLENINLLSEIAENKNIKLVNKISANTLTWSDRNQIDIVIRNLISNALKFTPKHGIVTIEAVEKNEHWLISVRDTGVGMNKATIASIFEKNSNITTYGTNNEKGTGLGLSLCKEMVENNKGTIWVTSDLRIGSCFYFT 684          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: A0A7H9AV72_9FLAO (Tetratricopeptide repeat-containing sensor histidine kinase n=2 Tax=Costertonia aggregata TaxID=343403 RepID=A0A7H9AV72_9FLAO)

HSP 1 Score: 426 bits (1095), Expect = 6.070e-142
Identity = 205/328 (62.50%), Postives = 280/328 (85.37%), Query Frame = 1
Query:    1 SYLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            +Y EAL +HE+YQ+LS+ +SK E++K+L MLKTK+++E+QKEDLIAS+++ LAKQ+ YI A++ IL V +  T L+ R+ K QK LNKEL  K++ L+++E ELR++N TKDKLFSIIGHDLRGP+GA +GL++LF++GEI E EF+ F+PKL  DIDHISFTLNNLLSWGQ+QM GT+T+P+LV ++N V ENINLL+EIA+ KSIK++++V +NTLAW+D++QIDIVIRNL+SNALKFTPKNG+VTI ++ + D W++++RDTG+G+ KE Q+KIF +N+N+TTYGT+ EKGTGLGL+LCKEMVENN G IW++S  +KG+ FYF+
Sbjct:  358 NYDEALTFHEIYQDLSEILSKGEAQKSLSMLKTKMDYEKQKEDLIASNKQELAKQQGYINAALLILAVFMITTFLVYRSTKIQKKLNKELKSKRDTLKKRETELRDMNETKDKLFSIIGHDLRGPVGALQGLLKLFKNGEIEETEFMKFMPKLSDDIDHISFTLNNLLSWGQSQMNGTVTRPALVALENLVSENINLLNEIAENKSIKLISKVQENTLAWSDSNQIDIVIRNLISNALKFTPKNGMVTIEAQEQNDCWIVSIRDTGVGMQKEIQEKIFSSNSNITTYGTNNEKGTGLGLSLCKEMVENNGGKIWLDSIPRKGSTFYFS 685          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: A0A3B0C915_9FLAO (Histidine kinase n=1 Tax=Ulvibacterium marinum TaxID=2419782 RepID=A0A3B0C915_9FLAO)

HSP 1 Score: 424 bits (1090), Expect = 3.330e-141
Identity = 209/324 (64.51%), Postives = 268/324 (82.72%), Query Frame = 1
Query:   13 ALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            AL YHE+YQ LSDT+S+NE+KK L MLKTK+ HE+QK  L+  +E ALA Q+NY+ A++AILLV + +T L+ R EK QK LNK L IK E LE+ + ELREIN TKDKLFSII HDLRGPIGAF+GL++LF+  EI + EFL FIPKL +DIDHI+FTLNNLLSWG++QM G  T+P ++ ++N V+ENINLLSEIA  KSIK+ +++  NT+AW+DA+QIDIVIRNL+SNALKFTPK+G++T+ +  +  HW I+VRDTG+G+D+ETQ+KIF +N+N+TTYGTD EKGTGLGL+LCKEMVE N GTIWVES ++KG+ F+FT
Sbjct:  361 ALKYHEVYQSLSDTLSRNENKKGLTMLKTKVEHEKQKMALVRENEMALATQRNYVNAALAILLVFVVVTFLVHRGEKIQKKLNKRLQIKAEELEQNDLELREINETKDKLFSIIAHDLRGPIGAFQGLLKLFKEKEIDQTEFLNFIPKLRTDIDHIAFTLNNLLSWGKSQMNGATTKPRIIPLENIVEENINLLSEIATNKSIKITSQLTPNTMAWSDANQIDIVIRNLISNALKFTPKDGMITLKAIEKNKHWEISVRDTGVGMDRETQEKIFDDNSNITTYGTDNEKGTGLGLSLCKEMVEKNGGTIWVESYLRKGSTFFFT 684          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: A0A495EAH9_9FLAO (Tetratricopeptide repeat protein n=1 Tax=Maribacter vaceletii TaxID=1206816 RepID=A0A495EAH9_9FLAO)

HSP 1 Score: 422 bits (1085), Expect = 1.890e-140
Identity = 208/327 (63.61%), Postives = 268/327 (81.96%), Query Frame = 1
Query:    4 YLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            Y +AL YHELYQ++SDT+S+NE++ +L MLKTK+ HE+QKE+LI SSEKA+AKQKNY+Y +++ILL+ + IT +I+RNEK QK LN EL+ KK+ LE++E  LREIN+TKDKLFSIIGHDLRGPIGAF+GL++LF+ GEI ++EFL F+PKL  DIDHISFTLNNLLSWGQ+QM G I +PS +C++N V ENINLLSE A  K+IK++N++   T +W D +QIDIVIRNL+SNALKFTP+ G +T+   ++ + W I V+DTG+G+  + QD IF  N+NVTTYGT+ EKGTGLGL+LCKEMVE N G IWV S + KG+CFYFT
Sbjct:  358 YAQALTYHELYQKISDTLSRNENQTSLTMLKTKIEHERQKEELILSSEKAIAKQKNYVYYALSILLIFIIITFIIKRNEKIQKNLNLELNTKKKDLEKKEINLREINSTKDKLFSIIGHDLRGPIGAFQGLLKLFKDGEIGQEEFLGFVPKLKLDIDHISFTLNNLLSWGQSQMNGAILKPSEICLENLVSENINLLSETAHAKTIKLINQLPPKTYSWADKNQIDIVIRNLISNALKFTPEKGTITVGHMQKRNSWEIFVKDTGVGMSVDMQDAIFNKNSNVTTYGTNNEKGTGLGLSLCKEMVEKNGGKIWVTSTLGKGSCFYFT 684          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: UPI001661B309 (Tetratricopeptide repeat-containing sensor histidine kinase n=2 Tax=Maribacter arenosus TaxID=1854708 RepID=UPI001661B309)

HSP 1 Score: 421 bits (1082), Expect = 5.030e-140
Identity = 215/327 (65.75%), Postives = 257/327 (78.59%), Query Frame = 1
Query:    4 YLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            Y+ AL +HELY  L DTI  N+++KNL ML TKL+ E+QKEDLI  +EKALA QK YIYA++ IL + L +TL++RRNEK QK LN EL  K   L E E+ELR+IN TKDKLFSIIGHDLRGPI AF+GL++L++ GEI  KEFL FIPKL SDIDHISFTLNNLLSWG+TQM G++T+PS+V IDN V ENINLLSE A  KS+ +VN++  N   W D+DQIDIVIRNLMSNA+KFTP+ G +T  +  R   W I+VRDTG+GID+ TQ KIF  N+NVTTYGT+ EKGTGLGL+LCKEMVE N G IWVESA   G+CFYFT
Sbjct:  356 YVSALKFHELYHTLHDTIMANKNEKNLTMLVTKLDFEKQKEDLIVENEKALASQKRYIYAALLILTIFLIVTLIVRRNEKIQKRLNVELYHKTAKLVENEKELRDINETKDKLFSIIGHDLRGPIAAFQGLLKLYKDGEIDSKEFLQFIPKLSSDIDHISFTLNNLLSWGRTQMNGSVTKPSIVSIDNLVNENINLLSETAKAKSLTIVNKMSTNIHTWVDSDQIDIVIRNLMSNAIKFTPERGYITFDAVERSTAWEISVRDTGVGIDEATQKKIFEKNSNVTTYGTNDEKGTGLGLSLCKEMVEKNNGKIWVESAAPNGSCFYFT 682          
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Match: A4ARD8_MARSH (Sensor histidine kinase/response regulator n=2 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) TaxID=313603 RepID=A4ARD8_MARSH)

HSP 1 Score: 420 bits (1080), Expect = 5.160e-140
Identity = 211/324 (65.12%), Postives = 263/324 (81.17%), Query Frame = 1
Query:   13 ALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEKALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQEQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFIPKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSEIADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTISSERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLTLCKEMVENNKGTIWVESAVKKGTCFYFT 984
            ALAYHE+YQ L+DT+S N+++KNL ML TKL +E+QKE L+A + KALA QK YIYA++ IL++ L +TL++RRNEK QK LN EL  K   L + E+ELR+IN TKDKLFSIIGHDLRGPI AF+GL++L+R GEI  KEFL FIPKLG+DIDHISFTLNNLLSWG+TQM G++T+P +V +++ V ENINLL E A  KSI +VN++   TL W+D DQIDIVIRNLMSNA+KFTP+ G++TI +  R  +W ++VRDTG+GID ETQ KIF  N+NVTTYGT+ EKGTGLGL+LCKEMVE N G IWVES ++ G+CFYFT
Sbjct:  336 ALAYHEIYQTLNDTLSANKNEKNLTMLVTKLEYERQKESLMAENAKALASQKRYIYAALFILVIFLIVTLIVRRNEKIQKRLNTELYDKTAELVKNEKELRDINETKDKLFSIIGHDLRGPIAAFQGLLKLYRGGEIDGKEFLQFIPKLGADIDHISFTLNNLLSWGRTQMNGSVTKPGIVSLESLVNENINLLDETAKVKSINIVNKLTTKTLTWSDNDQIDIVIRNLMSNAIKFTPEKGLITIDAIERSSNWEVSVRDTGVGIDIETQKKIFNKNSNVTTYGTNDEKGTGLGLSLCKEMVEKNNGKIWVESFMENGSCFYFT 659          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15317.3083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S3PS56_9FLAO4.150e-16472.48Sensor histidine kinase n=1 Tax=Maribacter algarum... [more]
A0A3B0TM25_9ZZZZ7.000e-16071.56Histidine kinase domain-containing protein n=1 Tax... [more]
A0A2G1YEE0_9FLAO3.940e-14865.85Histidine kinase n=1 Tax=Maribacter sp. TaxID=1897... [more]
UPI00126A4F1B1.040e-14264.53ATP-binding protein n=1 Tax=Pelagihabitans pacific... [more]
A0A1G9J457_9FLAO4.170e-14263.41Signal transduction histidine kinase n=2 Tax=Krieg... [more]
A0A7H9AV72_9FLAO6.070e-14262.50Tetratricopeptide repeat-containing sensor histidi... [more]
A0A3B0C915_9FLAO3.330e-14164.51Histidine kinase n=1 Tax=Ulvibacterium marinum Tax... [more]
A0A495EAH9_9FLAO1.890e-14063.61Tetratricopeptide repeat protein n=1 Tax=Maribacte... [more]
UPI001661B3095.030e-14065.75Tetratricopeptide repeat-containing sensor histidi... [more]
A4ARD8_MARSH5.160e-14065.12Sensor histidine kinase/response regulator n=2 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15317contigE-siliculosus-1a_F_contig15317:2..985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size984
Model size984
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01001,ko02022
Best eggNOG OGNA|NA|NA
Best tax levelMaribacter
COG Functional cat.T
EggNOG OGs1HX1A@117743,2PG69@252356,4NI29@976,COG0457@1,COG0457@2,COG4251@1,COG4251@2
EggNOG free text desc.Tetratricopeptide repeat
KEGG Pathwayko02025,map02025
KEGG koko:K20971
Preferred nameladS
Seed eggNOG ortholog313603.FB2170_10591
Seed ortholog evalue6e-116
Seed ortholog score424.1
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928041.9082487-CDS-E-siliculosus-1a_F_contig15317:1..9851622928041.9082487-CDS-E-siliculosus-1a_F_contig15317:1..985Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15317 2..985 +
1696318784.6029732-CDS-E-siliculosus-1a_F_contig15317:1..9851696318784.6029732-CDS-E-siliculosus-1a_F_contig15317:1..985Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15317 2..985 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15317.3083.1prot_E-siliculosus-1a_F_contig15317.3083.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15317 2..985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15317.3083.1

>prot_E-siliculosus-1a_F_contig15317.3083.1 ID=prot_E-siliculosus-1a_F_contig15317.3083.1|Name=mRNA_E-siliculosus-1a_F_contig15317.3083.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=328bp
SYLEALAYHELYQELSDTISKNESKKNLVMLKTKLNHEQQKEDLIASSEK
ALAKQKNYIYASMAILLVLLAITLLIRRNEKTQKTLNKELSIKKEALEEQ
EQELREINNTKDKLFSIIGHDLRGPIGAFKGLIQLFRSGEITEKEFLTFI
PKLGSDIDHISFTLNNLLSWGQTQMKGTITQPSLVCIDNTVKENINLLSE
IADKKSIKMVNEVMDNTLAWTDADQIDIVIRNLMSNALKFTPKNGIVTIS
SERRGDHWVIAVRDTGIGIDKETQDKIFVNNTNVTTYGTDKEKGTGLGLT
LCKEMVENNKGTIWVESAVKKGTCFYFT
back to top

mRNA from alignment at E-siliculosus-1a_F_contig15317:2..985+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15317.3083.1 ID=mRNA_E-siliculosus-1a_F_contig15317.3083.1|Name=mRNA_E-siliculosus-1a_F_contig15317.3083.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=984bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15317:2..985+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGTTATTTAGAAGCTCTGGCATATCATGAGCTATATCAAGAACTATCGGA TACTATTTCGAAAAACGAAAGCAAAAAGAATTTGGTGATGTTAAAAACCA AATTAAATCATGAACAGCAAAAAGAAGATTTAATTGCAAGTAGTGAAAAA GCTCTTGCTAAGCAAAAAAATTATATTTATGCCTCAATGGCAATTTTACT TGTTTTACTTGCTATTACCTTGTTAATTCGTAGAAATGAAAAAACACAAA AAACACTAAATAAGGAGCTAAGTATAAAGAAAGAAGCTCTTGAAGAACAA GAGCAAGAGTTGCGAGAAATCAATAACACTAAAGACAAATTATTTTCGAT TATTGGTCATGATTTAAGAGGTCCTATAGGTGCTTTCAAAGGTCTTATTC AGCTTTTTAGGAGTGGAGAGATAACAGAAAAGGAATTTTTAACTTTTATA CCTAAATTGGGCTCTGATATTGATCATATCTCATTTACACTGAACAACTT ACTTTCTTGGGGACAAACACAGATGAAGGGAACCATTACACAGCCTTCAT TAGTGTGCATTGATAATACTGTGAAAGAAAATATTAACCTACTCTCTGAG ATAGCAGATAAAAAATCAATAAAAATGGTCAATGAGGTTATGGATAACAC CTTAGCTTGGACCGATGCAGATCAAATTGATATCGTCATTCGCAATTTAA TGAGCAACGCGTTGAAATTTACTCCAAAAAACGGAATTGTAACCATTTCT TCTGAGCGAAGAGGAGATCACTGGGTTATCGCGGTTCGTGATACCGGTAT AGGTATTGATAAGGAAACACAAGATAAAATCTTTGTAAATAATACCAATG TAACTACCTATGGAACTGATAAAGAAAAAGGGACCGGACTTGGATTAACC TTATGTAAAGAGATGGTAGAAAATAATAAAGGAACAATATGGGTAGAAAG CGCTGTGAAAAAAGGTACTTGTTTTTACTTCACT
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15317:2..985+

>mRNA_E-siliculosus-1a_F_contig15317.3083.1 ID=mRNA_E-siliculosus-1a_F_contig15317.3083.1|Name=mRNA_E-siliculosus-1a_F_contig15317.3083.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1968bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15317:2..985+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AGTTATTTAGAAGCTCTGGCATATCATGAGCTATATCAAGAACTATCGGA
TACTATTTCGAAAAACGAAAGCAAAAAGAATTTGGTGATGTTAAAAACCA
AATTAAATCATGAACAGCAAAAAGAAGATTTAATTGCAAGTAGTGAAAAA
GCTCTTGCTAAGCAAAAAAATTATATTTATGCCTCAATGGCAATTTTACT
TGTTTTACTTGCTATTACCTTGTTAATTCGTAGAAATGAAAAAACACAAA
AAACACTAAATAAGGAGCTAAGTATAAAGAAAGAAGCTCTTGAAGAACAA
GAGCAAGAGTTGCGAGAAATCAATAACACTAAAGACAAATTATTTTCGAT
TATTGGTCATGATTTAAGAGGTCCTATAGGTGCTTTCAAAGGTCTTATTC
AGCTTTTTAGGAGTGGAGAGATAACAGAAAAGGAATTTTTAACTTTTATA
CCTAAATTGGGCTCTGATATTGATCATATCTCATTTACACTGAACAACTT
ACTTTCTTGGGGACAAACACAGATGAAGGGAACCATTACACAGCCTTCAT
TAGTGTGCATTGATAATACTGTGAAAGAAAATATTAACCTACTCTCTGAG
ATAGCAGATAAAAAATCAATAAAAATGGTCAATGAGGTTATGGATAACAC
CTTAGCTTGGACCGATGCAGATCAAATTGATATCGTCATTCGCAATTTAA
TGAGCAACGCGTTGAAATTTACTCCAAAAAACGGAATTGTAACCATTTCT
TCTGAGCGAAGAGGAGATCACTGGGTTATCGCGGTTCGTGATACCGGTAT
AGGTATTGATAAGGAAACACAAGATAAAATCTTTGTAAATAATACCAATG
TAACTACCTATGGAACTGATAAAGAAAAAGGGACCGGACTTGGATTAACC
TTATGTAAAGAGATGGTAGAAAATAATAAAGGAACAATATGGGTAGAAAG
CGCTGTGAAAAAAGGTACTTGTTTTTACTTCACTAGTTATTTAGAAGCTC
TGGCATATCATGAGCTATATCAAGAACTATCGGATACTATTTCGAAAAAC
GAAAGCAAAAAGAATTTGGTGATGTTAAAAACCAAATTAAATCATGAACA
GCAAAAAGAAGATTTAATTGCAAGTAGTGAAAAAGCTCTTGCTAAGCAAA
AAAATTATATTTATGCCTCAATGGCAATTTTACTTGTTTTACTTGCTATT
ACCTTGTTAATTCGTAGAAATGAAAAAACACAAAAAACACTAAATAAGGA
GCTAAGTATAAAGAAAGAAGCTCTTGAAGAACAAGAGCAAGAGTTGCGAG
AAATCAATAACACTAAAGACAAATTATTTTCGATTATTGGTCATGATTTA
AGAGGTCCTATAGGTGCTTTCAAAGGTCTTATTCAGCTTTTTAGGAGTGG
AGAGATAACAGAAAAGGAATTTTTAACTTTTATACCTAAATTGGGCTCTG
ATATTGATCATATCTCATTTACACTGAACAACTTACTTTCTTGGGGACAA
ACACAGATGAAGGGAACCATTACACAGCCTTCATTAGTGTGCATTGATAA
TACTGTGAAAGAAAATATTAACCTACTCTCTGAGATAGCAGATAAAAAAT
CAATAAAAATGGTCAATGAGGTTATGGATAACACCTTAGCTTGGACCGAT
GCAGATCAAATTGATATCGTCATTCGCAATTTAATGAGCAACGCGTTGAA
ATTTACTCCAAAAAACGGAATTGTAACCATTTCTTCTGAGCGAAGAGGAG
ATCACTGGGTTATCGCGGTTCGTGATACCGGTATAGGTATTGATAAGGAA
ACACAAGATAAAATCTTTGTAAATAATACCAATGTAACTACCTATGGAAC
TGATAAAGAAAAAGGGACCGGACTTGGATTAACCTTATGTAAAGAGATGG
TAGAAAATAATAAAGGAACAATATGGGTAGAAAGCGCTGTGAAAAAAGGT
ACTTGTTTTTACTTCACT
back to top