mRNA_E-siliculosus-1a_F_contig153.3075.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: D7FVN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN3_ECTSI) HSP 1 Score: 1164 bits (3011), Expect = 0.000e+0 Identity = 616/644 (95.65%), Postives = 622/644 (96.58%), Query Frame = 2
Query: 2 MLRSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHHVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGGGNGKGNTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDNALPCSRLALTAHEFSGLVSGRGSIASFLRVLPXXXXXXXXXXXX-TSPLEKSGSKGIKPTAKEALAVGPSGQIGGGRSFPEGDDEDVPGRETAEASTGPREVPRVGSKDGSRIDRSRNFQPSSHLAGGARDGRMAPSPLRPGHERCPKCGMVLAPEDLQEHLDFHYAEGLQERYTREGDVARDMAARMSDREGLPKRKIQEAGGGKRAKSQTKRPAAGLRIDSFFKPT 1930
MLRSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRT AAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGH VDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAE ASDLKRFSQQDLVG FGTKTGEWLWRACRGMDDEPV PNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGGGNGK NTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDNALPCSRLALTAHEF GL+SGRGSIASFLR LPXXXXXXXXXXXX TSPLEK GSKG+KP AK+ALAV PSGQ GGGRS PEGDDEDVPG ETAEAS GPR+VPRVGSKD SR+DRSRNFQPSSHLAG A D R APSPLRPG+ERCPKCG VLAPEDLQEHLDFHYAEGLQERYTREGDVARDMAARMSDREGLPKRKIQEAGGGKRAKSQTKRPAAGLRIDSFFKPT
Sbjct: 1 MLRSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTTAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHRVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAEKASDLKRFSQQDLVGNFGTKTGEWLWRACRGMDDEPVAPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGGGNGKSNTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDNALPCSRLALTAHEFCGLISGRGSIASFLRALPXXXXXXXXXXXXXTSPLEKWGSKGVKPDAKQALAVDPSGQAGGGRSLPEGDDEDVPGTETAEASIGPRDVPRVGSKDDSRVDRSRNFQPSSHLAGAACDERTAPSPLRPGYERCPKCGKVLAPEDLQEHLDFHYAEGLQERYTREGDVARDMAARMSDREGLPKRKIQEAGGGKRAKSQTKRPAAGLRIDSFFKPT 644
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A0G4ETT1_VITBC (UmuC domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETT1_VITBC) HSP 1 Score: 350 bits (899), Expect = 2.630e-108 Identity = 216/458 (47.16%), Postives = 270/458 (58.95%), Query Frame = 2
Query: 26 GRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDE---LDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTA--------GHHVD----PTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVS-WSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGGGNGKGNTSTTRSRTVDIPGGGESPTTAS---LVSEAMAVFAKT--DNALPCSRLALTAHEFSGLVSGRGSIASFLR 1336
RV+ H DLD FYCQVEH RL I VPLAVQQWDGLIAVNY AR +GV+RGDRTA AK KCP + LVHVETI +D DD RHD+ KVSL+RYRTAS IMAIF HC +VERASIDEAYLDLT++ + V G +A+ D +GT G +D ++ + +L+ GA L A +R AV E FTVSAGI+ NK+L+K AS+ +KPN+QT+VP + DM+ +PLR VRGLGGKLGE V + A TA DL+ S ++L F TG WLWR CRGMDDE V+PNLKPKSL KSF PVR E + W+ +L E+ R+ D EA RRA L Q L + RSR+ +P G + S LV+ +A+ K D LPCSR+ + A +F + S SI S+ +
Sbjct: 16 NRVVAHLDLDAFYCQVEHRRLNIARDVPLAVQQWDGLIAVNYPARAAGVRRGDRTAVAKGKCPDLVLVHVETISSDGRHPGSDDPADRHDRQREKVSLDRYRTASAEIMAIFSRHCPKVERASIDEAYLDLTQQVQAELKRVVGGGGPSLAEL--VDAEGTRDSTLLAVDGSVLDVDKVSLDSPEASLVVGAVLIARLRKAVLDETQFTVSAGISHNKMLSKQASAKHKPNRQTLVPTSSIDDMMGHLPLRDVRGLGGKLGEAVSRVFPDATTAKDLQAHSLEELKRTFNDGTGTWLWRVCRGMDDEQVSPNLKPKSLLAFKSFRPVRKMEDLERWLGVLAEEVCDRMQADTEAHRRRAKTLMAQHRGL-------------------SGAARSRSGPMPRGKDPHGLLSKDELVAAGLALLRKLPEDELLPCSRIGMGAQDFEDIDSQTASITSYFK 452
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A7S2SV00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV00_9STRA) HSP 1 Score: 320 bits (819), Expect = 4.820e-96 Identity = 250/729 (34.29%), Postives = 345/729 (47.33%), Query Frame = 2
Query: 32 VIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGAD--------DELDDAGT----------RHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPE-TDLQGTAGHHVDPTNAF-DRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAET---------ASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMIS-LKPGSRANQRDAGGGNGKGNTSTT---RSRTVDIPG--------------------------------------------GGESPTT---------ASLVSEAMAVFAKTDN-----ALPCSRLALTAHEFSGLVSGRGSIASFLRVLPXXXXXXXXXXXXTSPLEKSGSKGIKPTAKEALAVGPSGQIGGGRSFPEGDDEDVPGRETAEASTGPREVPRVGSKDGSRIDRSRNFQPSSHLAGGARDGRMAPSPLRPGHERCPKCGMVLAPEDLQEHLDFHYAEGLQERYTREGDVARDMAARMSDREGLPKRKIQEAGGGKRAKSQTKRPAAGL-------RIDSFFK 1924
VI+H DLDCFYCQVEH RL IP S PLAVQQW+GLIAVNY AR GV+RGDR AK KCP + VHVETIG D +E GT D+ CKVSLERYR+ASF ++ + A C VERASIDE Y D+TE A + + D+ SPE T+ Q G +DPT+ D LL GA +R + +E FTVSAGIA K+ AK+AS+ +KPNKQT+VP ++ +++ T+ L +RGLGGKLGE V ++ +++ A L+ ++ L+ +FG KTG WL R CRG+D +PV+PNL+PKS++ KSF+ + +L W+ +LC EL+ RIA D + RR LTLQ S L+P N + G TS RSR+ +P G E TT A L S A V +K +N LPCSR+AL +F ++ FL+ P + T+ E+ A E+++ TGPR GS P+ AG DG + C +CG +A + +QEH+DFH+A +Q+++ A+ + + + G ++K K++T ++GL RIDSFF+
Sbjct: 1 VILHLDLDCFYCQVEHRRLSIPMSTPLAVQQWEGLIAVNYAARAFGVRRGDRVDVAKAKCPALVFVHVETIGEDGAAGLPSGEETHHRGTVGAPSAGQAQAPDRETCKVSLERYRSASFEVLRVIDAACPAVERASIDEVYCDVTEAALRRLKS-------DMPPSPEQTETQVVGGCPLDPTDTHGDALLLMGATFADELRRKIREETTFTVSAGIAHGKMFAKIASAKHKPNKQTIVPFASTEELMRTIELSDIRGLGGKLGEEVSTFLRSQDTPKTDGTFRAIALQAVPERLLIRQFGEKTGRWLHRICRGLDTDPVSPNLRPKSINCFKSFSTITAMAPLLRWLDVLCGELTDRIAADHALFKRRPRVLTLQHRSTLRPDHLKNWK-------AGVTSELTGMRSRSAALPPSLVSLILACYSSKQSKKRKRQSVDGAATPLVDSIQVHSGDAEPLGSEGETTPLTSSPAFPAELQSLARLVMSKLENDSGVPTLPCSRIALGVSDFCSESKASRVLSDFLKAQP-----------------------CRKTSAESSA------------------------ESSDGHTGPRPGHDAVGDSGS---------PAQAAAG---DGNLV-------RTTCERCGASIALDAIQEHMDFHFAADVQQQWR--SQEAKQSSDKQQRKPGPVRKKAT-------TKTKTGAASSGLASHGPFSRIDSFFQ 640
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A7S3C888_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C888_9CHLO) HSP 1 Score: 270 bits (689), Expect = 1.870e-79 Identity = 156/354 (44.07%), Postives = 211/354 (59.60%), Query Frame = 2
Query: 29 RVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHHVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVS-WSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLK 1087
RVI+H DLD FYCQVEH RLGI +VPLAVQQW GLIAVNY AR +GV R AK CP + LVHVETIG +KG K SL RYR ASF ++ + + ++ERASIDE Y+D+T + +G+ D ++ G ++P++ D L+ GA++ +R A++ E + +SAGI+ NK+L+KLAS++NKPNKQT+VP A ++ T+ + + GLGGKLG+ +V + +TA DL+ ++DLV G KT WL + CRG D V PNL PKSL+ CKSF P + +V W+ +L ELS RI D E + R L L S K
Sbjct: 5 RVILHLDLDAFYCQVEHKRLGIDRNVPLAVQQWAGLIAVNYPARANGVGRFCDINEAKTACPDLRLVHVETIGNTKGGKVGAVEANKGTSKASLARYRRASFEVINVMKRFSDKIERASIDEVYIDVTALVDDRLRR--SGDFSDGGGLEWSESHVAEGAALNPSSEHDIRLIMGAKVCKEIRDAIKAETEYEMSAGISHNKLLSKLASAMNKPNKQTIVPTSAVPSLMSTLEYKQINGLGGKLGDRLVQLFPGLKTALDLQGVPREDLVRGLGEKTAGWLQQLCRGDCDSDVKPNLLPKSLNACKSF-PASELGAVKKWLLILAEELSDRILEDHEDFGRTPRLLVLHARSSK 355
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A0U9HQB4_KLENI (Putative Y-family DNA polymerase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HQB4_KLENI) HSP 1 Score: 280 bits (715), Expect = 3.500e-78 Identity = 165/360 (45.83%), Postives = 208/360 (57.78%), Query Frame = 2
Query: 26 GRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHHV------------------DPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRR 1051
RVIVH DLD FY VE VRLG+P PLAVQQW+GLIAVNY AR GV R A AKQKCP + LVHVE IG ++ ++G KVSLERYR AS I+ IF E+ASIDEAYLDLT + L + V D+PET + DP+N +DR LLAGA + A MR AV ELG+T SAGIA NK+LAKLAS++NKP KQTVV A ++ P+R +R LGGK+G+ + ETA D+++ + L+ + G K G W++RA RG+ DEPV KS+ KS++ E V +W+RLL EL+ RI D + RR
Sbjct: 2 ARVIVHVDLDAFYAAVEQVRLGLPLDQPLAVQQWEGLIAVNYAARAKGVTRFMAIAEAKQKCPDLRLVHVEVIGG-------SSKREEG--KVSLERYRQASANILPIFHRFSPLCEKASIDEAYLDLTAQVEALLNQSPEPETAPVYDNPETASASEKSEPISMASVQSRSDVIVLDGPLDPSNEYDRRLLAGATIVAQMREAVFHELGYTCSAGIAPNKLLAKLASAMNKPYKQTVVTPRAIPGLMKDFPMRKIRNLGGKMGKELCDTLGCETAGDVQKIPEAVLIEKLGDKMGPWVFRAVRGIHDEPVQTRQISKSMLAAKSYSLTNSIEDVRHWLRLLSMELAARIEYDVKLNKRR 352
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A7S3EFR3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFR3_9RHOD) HSP 1 Score: 263 bits (672), Expect = 4.120e-76 Identity = 171/437 (39.13%), Postives = 242/437 (55.38%), Query Frame = 2
Query: 29 RVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHHVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGGGNGKGNTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDN-ALPCSRLALTAHEFSGLVSGRGSIASFLR 1336
RVI H DLD FY QVE VRLG+ PL VQQW+G+IAVNY ARK GV R D+ K+KCP+ LVHVE + +E +D ++ KVSL RYR AS I + RVERASIDEAYLDLT+ K + V N ++ + + + G +DP+ D +L+ G+ +T+ +R + +ELG+T SAG+A NK LAKLAS++NKPN QT+VP +++ +P R +R LGGKLG + + ETA ++ + ++L RFG K +++ RG+D V P KPKS+ KS +D + V W+R+L +EL R+ D E R A L +IS K GS T S+T+ +P G +S A ++ E ++ T + + P + L LTA F + SI FL+
Sbjct: 7 RVIAHVDLDAFYAQVEMVRLGVDEDAPLCVQQWEGVIAVNYPARKRGVTRFDKAGEVKKKCPECILVHVEVLT--EEREDG---KEQPKAKVSLARYREASARIFKLILREIERVERASIDEAYLDLTDMVKK--RRVIRDNDENLGRASDCIV---LGEELDPSRKDDLSLIIGSEITSDLRRMIREELGYTCSAGVAHNKTLAKLASAMNKPNCQTLVPNSCVQGLMEKLPFRKIRQLGGKLGVELEALG-VETAGQVQCYKLEELSRRFGQKNAHFVFDIVRGIDRSEVVPRSKPKSMLAAKSLPGEQDWDGVNRWLRMLASELHDRMLFDEEVNVREARNL---VISFKSGS---------------VPRTTSKTLPMPRG-QSNRLARMLEEIQSLLRITPSFSFPIAFLGLTATNFEEKPADNESINKFLK 413
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A2R6VZP2_MARPO (UmuC domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6VZP2_MARPO) HSP 1 Score: 267 bits (682), Expect = 1.290e-74 Identity = 154/356 (43.26%), Postives = 207/356 (58.15%), Query Frame = 2
Query: 11 SHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLC-------QEV-------EAGNARDVADSPETDLQGTAGHHVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDRE 1036
H H V++H DLDCFY VEHVRLGIP VPLAVQQW+GLIA+NY AR +G+ R +R A +KCP++ VHVETIG D +R G KVSLERYR AS + IF+ E+ASIDEAYLD+T K+ QE+ E G+ V D P + P N++DR +LAGA + +R AV ELG+T S GIA+NK+LAK+AS+ NKP+KQT+VP A ++ ++PLR V+ LGGKLGE + TA + + LVG FG + G ++W A RG+ ++ V KS+ K+F ++ + W+ +L ELS R+ D E
Sbjct: 13 DHNTHSSVVLHVDLDCFYAAVEHVRLGIPREVPLAVQQWEGLIAINYAARAAGITRHERVHQAMRKCPELKCVHVETIGDGSGNVDGTSR---GHAKVSLERYRQASANVFKIFRRFSDLCEKASIDEAYLDVTSRVEKMMIQGCNWDQELHRLIGNQEEGSEMIVLDGP-----------LVPFNSYDRRMLAGAIIAEKIRAAVRSELGYTCSVGIATNKLLAKIASAKNKPDKQTLVPPRAVPYLMQSMPLRKVKLLGGKLGEEMTEKWGVSTAGEAQAVPLPALVGCFGERLGNYVWNAVRGIQNDKVQVKQVSKSMLAAKTFHSTKELSDIRMWLSILAEELSVRMLRDFE 354
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A1X2HCH0_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HCH0_SYNRA) HSP 1 Score: 261 bits (667), Expect = 1.650e-74 Identity = 174/467 (37.26%), Postives = 235/467 (50.32%), Query Frame = 2
Query: 26 GRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNAR----DVADSP--------------------ETDLQGTAGHHV----DPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTP-VRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGGGNGKGNTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDNALPCSRLALTAHEF-SGLVSGRGSIASFLR 1336
RVIVH DLDCFYCQVE VR G+PT VP AVQQW GLIAVNY AR +GV R A++ CP+I L+HV T ++ R + KVSL+ YR AS I IF+ HC V++ +DE ++DLTE +L + A D+ D P + D A H DP D L GA L AA+R + EL +T SAGIA NKV+AKL SS NKPNKQT++ A++ + P +R LGGKLG V + + A DL +++ DL RFG TG WL+ RG+D+E VT PKS+ KSF P V+ E + W L EL R+ ++ + + LT+ S + +T R+R+ +P + + L A+ +F K ++ALPC L+L A S G SI+ F +
Sbjct: 12 SRVIVHIDLDCFYCQVEQVRRGVPTHVPAAVQQWQGLIAVNYAARAAGVTRHANIEDARKACPEIQLLHVATYAENETEWKYHARPSRATHKVSLDPYREASKKIFTIFKRHCDTVQKIGLDECFMDLTETVNELMTKRYPTAALAADDDLCDQPIDWNKLGVTIASEDESERRRQLDNDVDADHEEESWRDPATWQDLQLAIGAELAAAIRQEIYDELSYTCSAGIAHNKVVAKLCSSKNKPNKQTILRHCATAAFMRDTPFTKIRNLGGKLGTEVETELNIDKAGDLWKYTVNDLQQRFGESTGLWLYNVARGIDNEEVTVTKAPKSIMASKSFRPPVKSSEEMQRWFATLAAELHTRMMLNFDEFDAWPKTLTIHYRSTQD------------------TTYRTRSCAMPRRTDLTSPDKLAQRAIILFGKAEDALPCVGLSLNAVAMQSSQTVGNHSISEFFK 460
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A5B8MBX0_9CHLO (DNA polymerase eta/iota n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MBX0_9CHLO) HSP 1 Score: 258 bits (658), Expect = 8.500e-74 Identity = 175/425 (41.18%), Postives = 234/425 (55.06%), Query Frame = 2
Query: 29 RVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERYRTASFAIMAIFQ--AHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNARDVADSPETDLQGTAGHHVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVS-WSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFTPVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRDAGGGNGKGNTSTTRSRTVDIPGGGESPTTASLVSEAMAVFAKTDN-ALPCSRLALTAHEF 1291
+VI+H DLD FY QVEH RLGI SVPLAVQQW GLIAVNY AR GV R AK +CP + LVHVETIG + G +K K L RYR+AS ++ Q + +ERASIDE Y+D T + + VE G + + D E+ + G ++ + D L+ GA+L +R AV+ E + +SAGI+ NK+L+KLAS++NKPN QT+VP+ A ++D + + GLGGKLGE + + + +T+ DL+ Q+DL G KTG W+ CRG DEPV PNL PKSL+ CKSF P E V W+ +L EL+ RI DR+ ++R L L + RD S +P +S T L + +F K LPCSRLAL A+ F
Sbjct: 5 KVILHLDLDAFYAQVEHRRLGIDRSVPLAVQQWAGLIAVNYAARSRGVGRFCDIQEAKSRCPDLKLVHVETIGNTSDGRMGGVAANKATSKACLNRYRSASTEVLKAMQRFSDVLLIERASIDEWYIDATALVEERLEGVEEGGSCSL-DWRESHV--CKGASLNASLDCDVRLIVGAKLCKEIRDAVKAETEYEMSAGISHNKMLSKLASAMNKPNMQTIVPSSAVEALMD-LDYTEINGLGGKLGEKLKTLYPNLKTSRDLQTIGQEDLARSLGQKTGAWIHALCRGEVDEPVKPNLLPKSLNACKSF-PASPIEQVHKWLLILAEELADRIEQDRQDFARMPRFLVLHARGA-----VHFRD-------------HSSQSPMP---KSATRDRLYEVGLKLFEKIQGECLPCSRLALGANSF 403
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Match: A0A835YYX1_9STRA (UmuC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX1_9STRA) HSP 1 Score: 263 bits (673), Expect = 6.900e-73 Identity = 192/487 (39.43%), Postives = 244/487 (50.10%), Query Frame = 2
Query: 71 VEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTR-----------HDKGACKVSLERYRTASFAIMAIFQAHCRRVERASIDEAYLDLTEEAAKLCQEVEAGNAR----------------------------------------DVADSPE------------------------------TDLQGTAGHHVDPTNAFDRALLAGARLTAAMRLAVEQELGFTVSAGIASNKVLAKLASSINKPNKQTVVPAGASSDMLDTVPLRSVRGLGGKLGETVVSWSKAETASDLKRFSQQDLVGRFGTKTGEWLWRACRGMDDEPVTPNLKPKSLSVCKSFT-PVRDEESVLNWMRLLCTELSQRIAVDREAWSRRATKLTLQMISLKPGSRANQRD--AGGGNGKGNTSTTRSRTVDIPGGGES---PTTASLVSEAMAVFAK-TDNALPCSR 1267
V V L I PL VQQW+GLIA++Y ARK G+KRGDR AA KCP + LVHV+TIG D+ KVSLERYR AS IMAIF C +VERASIDEAYLDLT + K Q + +R D P T + G G VD +NA D LL GAR+TA +R AV ELG+TVSAGIA K+ AKLAS+ +KP+KQT+VPA A++ +L VPLR VRGLGGKLG V + + A+ +DL+R+S+ L FG K G WL +G+DDEPV N+ PKSL+ KS P R ++V W+ +L EL +R A D A RR T L +Q + RA+ RD G T RS + + GG + P+ LV+ A+++F K D LPC+R
Sbjct: 370 VHQVELAISRDEPLCVQQWEGLIAISYAARKFGIKRGDRVEAALAKCPHLRLVHVDTIGCSGSXXXXXXXXXXXXXXXXXXRDRTREKVSLERYRAASARIMAIFARFCPQVERASIDEAYLDLTAQVHKALQARQHSRSRSSXXXXXXXXXXXXANDAXXXXXXXXXXXXXXXXXXDGECDAXXEPGGGGADCGGXXXXXXXXXXXXXGGSGAQVAGTAVLGVDGRGVDASNAHDALLLEGARITAHVRAAVRAELGYTVSAGIAHCKMFAKLASARHKPDKQTLVPASATAHLLAGVPLREVRGLGGKLGADVAARTHAQNLADLQRYSEAQLRSLFGDKGG-WLASIAQGIDDEPVVANIAPKSLNCFKSLPEPARSADAVRAWLHVLGGELLERAAADAAAHRRRPTTLVVQHRGVL---RADHRDNWVAGRTADLTGMTARSARLPVGSGGGALSLPSAEQLVAAALSLFHKCADQPLPCTR 852 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig153.3075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig153.3075.1 >prot_E-siliculosus-1a_F_contig153.3075.1 ID=prot_E-siliculosus-1a_F_contig153.3075.1|Name=mRNA_E-siliculosus-1a_F_contig153.3075.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=644bp MLRSHAVHGRVIVHADLDCFYCQVEHVRLGIPTSVPLAVQQWDGLIAVNYback to top mRNA from alignment at E-siliculosus-1a_F_contig153:71588..77862+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig153.3075.1 ID=mRNA_E-siliculosus-1a_F_contig153.3075.1|Name=mRNA_E-siliculosus-1a_F_contig153.3075.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6275bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig153:71588..77862+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig153:71588..77862+ >mRNA_E-siliculosus-1a_F_contig153.3075.1 ID=mRNA_E-siliculosus-1a_F_contig153.3075.1|Name=mRNA_E-siliculosus-1a_F_contig153.3075.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3864bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig153:71588..77862+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |