mRNA_E-siliculosus-1a_F_contig153.3074.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: D7FVN2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN2_ECTSI) HSP 1 Score: 480 bits (1235), Expect = 1.650e-167 Identity = 252/256 (98.44%), Postives = 255/256 (99.61%), Query Frame = 1
Query: 160 MRHRASAISQQRDRCATLTMGAAGKKRKKMEKDALKYADGINKNVARETQKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAREPDLEGELAKLRVAGDKKDDKKKK 927
MRHRASAIS+QRDRCATLTMGAAGKKRKKMEKDALKYADGINKNVARETQKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFF+TLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSG CKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFA+EPDLEGELAKLRVAGDKKDDKKKK
Sbjct: 1 MRHRASAISEQRDRCATLTMGAAGKKRKKMEKDALKYADGINKNVARETQKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFITLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGGCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAKEPDLEGELAKLRVAGDKKDDKKKK 256
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A835YNB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB0_9STRA) HSP 1 Score: 170 bits (430), Expect = 3.700e-46 Identity = 106/223 (47.53%), Postives = 135/223 (60.54%), Query Frame = 1
Query: 229 GKKRKKMEKDALKYADGINKNVARETQKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKE-TGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAREPDLEGELAKLRV 894
GKK++ +E D DG + E +K D +A +LL C RD I A+ DL S+ A+KPAQS EL KDWRLV+ S D + +G+GLHKLPLTRM+D F++ G R I T EVLRVIGPFPN++N LSG KS G L I YTSMIDGTGKE T G+ D V ++V FVG ++V A + + +V+ RE DLEG L +LRV
Sbjct: 52 GKKKRALEVDE----DGTVQQSKAELKK-LDELAAQLLNLCTTNARDTAAIQAQARDLGSK--AVKPAQSAELSKDWRLVYVSSGDVLGALGSGLHKLPLTRMEDQFVSFAGSRGLGREITTTEVLRVIGPFPNVKNVLSGTYKSMGTSELLINYTSMIDGTGKEITSGNAA--MDGNVSIEVVFVGSDIMVTAPRDASGARQV-MVYQREEDLEGALKRLRV 264
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A7S2UVC0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVC0_9STRA) HSP 1 Score: 161 bits (408), Expect = 6.980e-43 Identity = 96/223 (43.05%), Postives = 138/223 (61.88%), Query Frame = 1
Query: 235 KRKKMEKDALKYADGINKNVARETQKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKET-GGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAREPDLEGELAKLRVAG 900
K+KK + + KNV ++EA ++A+ LL+ C KRD KI++ + +L+ T ++ PAQS L DW +VF +D DA+ VGTGL KLPLT+M+ F++ +G + R+I E+LR++GPFPN++N LSG K+ GA SL+I+Y MIDGTGKE GS T DR + ++V FVG+ LV S++ +V RE DL+ L KLRV G
Sbjct: 58 KKKKSRSNGTEEKTLKKKNV----EQEAGIVADGLLELCTAEKRDTEKISSVVEELKKYTDSIMPAQSSNLRGDWEVVFVTDADALDHVGTGLRKLPLTKMEAMFLSFDGSRSVGRSIEASEILRILGPFPNVKNKLSGTYKAQGARSLSIKYDLMIDGTGKEVKSGSAT--TDRSISINVEFVGEKALVATIPSSQH----IMVLKREVDLDEALRKLRVDG 270
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A7S3YGC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGC3_HETAK) HSP 1 Score: 112 bits (281), Expect = 4.030e-26 Identity = 69/151 (45.70%), Postives = 90/151 (59.60%), Query Frame = 1
Query: 454 DWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGD--CKSTGAGSLNIRYTSMIDGTGK--ETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAREPDLEGELAKLRV 894
DWRL + S + +GTGLHKLPLTRM+D F++ G R EVLRV+GPFPNLRN LSGD S+G G ++++YT MIDGTGK E+G DR ++ V + G LV+ +K +LVF RE +L+ L LRV
Sbjct: 1 DWRLAYVSAAAGLDEIGTGLHKLPLTRMEDLFLSFSGSKAAGRAAACTEVLRVLGPFPNLRNKLSGDFGISSSGTG-ISLKYTQMIDGTGKMLESGNGM----DRKNNLQVIYSGLDGLVM-----LTKTGCALVFQRETNLQAALKALRV 141
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A8J2STN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STN9_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.670e-25 Identity = 73/199 (36.68%), Postives = 110/199 (55.28%), Query Frame = 1
Query: 319 DVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLSLVFAREPDLEGELAKLRVAGDKKDD 915
D A ++L+ C E RD I A + DL + + P + DWRLV+A D+ + +GTGLH++PL ++D F++LE + A EV+RVIGPFPN++N L+G + G +L + YT +IDGTG E T Q R V + +A + + +LV+ + S + LVF RE D L +LRV + +D
Sbjct: 75 DEKASKVLELCKEENRDFDAIDAAVKDLAALPAY--PDIGFRARGDWRLVWAKSDEGVGFIGTGLHRVPLANLEDQFLSLEADGSCALT----EVIRVIGPFPNVKNLLTGT-STVGPSTLRLTYTKVIDGTGAEL----TSSQARSVKLRLAALSKSLLVVAAASIDADD--WLVFEREDDFADALERLRVPPNTPED 260
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A7S1VIR5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIR5_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.900e-21 Identity = 67/171 (39.18%), Postives = 98/171 (57.31%), Query Frame = 1
Query: 418 ALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGS-----LNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLV-LESVSAKSKKPLS------LVFAREPDLEGELAKLRV 894
+L+P + + D+RL +A D+ + VGTGLHK+PL RMQ+ F++L+G + I +EV+ ++GPFPN+RNTL GDC AG +++ SMIDGTG E +G + R V + + F + LV + PL LVF RE DL+G+LA+ RV
Sbjct: 240 SLRPLTTSKTKLDYRLAWAGSDETLCHVGTGLHKVPLARMQEVFLSLKGRNE----IEVLEVISILGPFPNVRNTLQGDCMDMKAGDGSFTEWTVKWESMIDGTGNEI---LSGGEARKVPLHMYFSDKNALVAVVPNDDNDSDPLGENGKNVLVFVREKDLDGKLAENRV 403
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A7S2KRS1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRS1_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.340e-21 Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 1
Query: 364 RDLTKIAAEIADL------RSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGDCK-STGAGS--LNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVG-QGVLVLESVSA-------KSKKPLSL-VFAREPDLEGELAKLRV 894
RD++ I A + L S ++ ++ S + D+++V+A D A+ VGTGLHK+PL R+Q+ F+++ + + EV+R++GPFPN++N L G+ K S G G L Y+SMIDGTGKE S G + R VD+ V + Q ++ S+ +S SL VF RE DL+GEL LRV
Sbjct: 2 RDMSGILARLRMLCTDFGTNSSSNNIRSITSRQEFLDYKMVWAGSDAAVCHVGTGLHKVPLARLQEVFLSIG-----KKRVEINEVIRILGPFPNVKNMLQGNVKVSVGGGESVLTFTYSSMIDGTGKEL--SAAGSEQRKVDLKVLYAADQAIVCTTSIDDDGAVDYFESDNGASLLVFFREKDLDGELDALRV 189
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A7S2XKB3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKB3_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.280e-20 Identity = 71/193 (36.79%), Postives = 102/193 (52.85%), Query Frame = 1
Query: 364 RDLTKIAAEIADLRSRTSALKPAQSYELGK--DWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGDCKSTGAGSLNIRYTSMIDGTGKETGGSQTGEQDRV--VDVDVAFVGQGVLVLESVSAKSKKPLS------------LVFAREPDLEGELAKLRV 894
RDL I ++ +L A + + G+ D+R+ + DDA+ VGTGLHK+PL R+QD FMT+ G N + EV+R++GPFPN+RNTLSGD + G L Y M+DG GK+ + G D V + +++ F +V +V K K L+F REP+LE +L LRV
Sbjct: 155 RDLDSILGKLKELSQLEGATRGLRVLAAGENVDYRMAWVGSDDAVCHVGTGLHKVPLARLQDVFMTV--GKN---RVEVFEVIRILGPFPNVRNTLSGDVAMS-KGQLQFSYDMMMDGLGKQL---EAGTDDNVRKLKLNILFADSNAIVA-TVPNKDAKATDVDDIMGENGANVLLFVREPELETKLEILRV 337
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A7S2I456_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I456_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.480e-20 Identity = 74/225 (32.89%), Postives = 116/225 (51.56%), Query Frame = 1
Query: 307 QKEADVIAERLLKTCAEPKRDLTKIAAEIADLRSRTS--------ALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTIEVLRVIGPFPNLRNTLSGDCK---------STGAGSLNIRYTSMIDGTGKETGGSQTGEQD--RVVDVDVAFVGQGVLV--LESVSAKSKK-PLS------LVFAREPDLEGELAKLRVA 897
QK + +++ P DL ++ + I L +T+ AL+ K++R+V+ D+A+ +GTGLHK+PL R+++ F+ LE + + +EV+R++GPFPN+RNTL GD G I Y SMIDGTGKE G++D ++VD+DV F V+V + V + K+ PL L+F +E + +L KLR A
Sbjct: 180 QKVITTVVDQIETLLESPNTDLNELLSLIRTLTDKTASQTGSIAGALRNLSISPQSKNYRMVWVGSDEAVCHIGTGLHKVPLARLEEVFLCLE-----KKTVQVLEVIRILGPFPNVRNTLMGDSSVIKPPGGTGEKGKTKFRIEYNSMIDGTGKEI---LAGKEDNVKIVDLDVLFADDKVMVCVVPPVEGEEKQDPLGENGSKVLLFFQEDYMNDKLEKLRAA 396
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Match: A0A1Z5JD44_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD44_FISSO) HSP 1 Score: 102 bits (253), Expect = 2.320e-20 Identity = 72/203 (35.47%), Postives = 112/203 (55.17%), Query Frame = 1
Query: 319 DVIAERLLKTCAEPKRDLTKIAAEIADLRSRTSALKPAQSYELGKDWRLVFASDDDAISVVGTGLHKLPLTRMQDFFMTLEGGSNTARNIVTI-EVLRVIGPFPNLRNTLSGDCKST---GAGSLNIRYTSMIDGTGKETGGSQTGEQDRVVDVDVAFVGQGVLVLESVSAKSKKPLS------LVFAREPDLEGELAKLRVA 897
D+ +E KT + P D+ + E+ S +S L +D+RL + DD+++ +GTGLHK+PL R+Q+ F++ G RN V + EV+R++GPFPN+RNTLSG +S+ G N+++ SM+DGTGKE G+++ + V + +V+ + S P L+F RE DLE +L LRVA
Sbjct: 146 DIKSENNKKTVSVP--DILALVRELTQQTS-SSPLTQLVGTTQRRDYRLAWVGSDDSVTHIGTGLHKVPLARLQEVFLSFPG-----RNRVLLQEVIRILGPFPNVRNTLSGSSRSSTRDGVTEWNVQWESMVDGTGKEL---LAGKEENIKSVPLRVYYSDEMVIIA-SRPCDDPWQGNGENVLLFLREDDLENKLEALRVA 336 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig153.3074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig153.3074.1 >prot_E-siliculosus-1a_F_contig153.3074.1 ID=prot_E-siliculosus-1a_F_contig153.3074.1|Name=mRNA_E-siliculosus-1a_F_contig153.3074.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=290bp MKCTWLQASCISLGVLRLSLLSKGFIVTGTSRLMRHRASAISQQRDRCATback to top mRNA from alignment at E-siliculosus-1a_F_contig153:67393..70777+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig153.3074.1 ID=mRNA_E-siliculosus-1a_F_contig153.3074.1|Name=mRNA_E-siliculosus-1a_F_contig153.3074.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3385bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig153:67393..70777+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig153:67393..70777+ >mRNA_E-siliculosus-1a_F_contig153.3074.1 ID=mRNA_E-siliculosus-1a_F_contig153.3074.1|Name=mRNA_E-siliculosus-1a_F_contig153.3074.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1740bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig153:67393..70777+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |