mRNA_E-siliculosus-1a_F_contig153.3070.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig153.3070.1
Unique NamemRNA_E-siliculosus-1a_F_contig153.3070.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: D7FQG6_ECTSI (Tellurite resistance methyltransferase, TehB, core n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG6_ECTSI)

HSP 1 Score: 760 bits (1963), Expect = 4.580e-266
Identity = 396/441 (89.80%), Postives = 404/441 (91.61%), Query Frame = 2
Query:  419 MGAARNAPTLLHRCLSLLLLXXXQMQMGMVCSFVVPPHPSGGIPSIETSNIIRPRPTAATSYTTVAATSAAGAEVTSCTTASVVGTPADESTTSQTRTAPSVGAAGASPDPFPTPSEFQEFVGWRKSGSSRVVLDLRPREDFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKGWQIDEEIDLSVAACVKDPANPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVVGXXXXXXXXEEGATRLQQATQTGCLGGVRSRAGGRSDTDGSEGATQGKPPEVRQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR 1741
            MGAAR+ PTLLHRCLSLLL XXX  QMGMVC FVVPPHPSGGIPSIETSN IRP PT ATSYTTV A S AGAE TSCTTA V GT AD+S  SQTRT P  GAAGASPDPF T SEFQEFVG RKSGS RVVLDLRPR DFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKGWQI+EE+DLSVAAC KDPA+PTEAWPTETGSTSLQVWRANDFLEFCMDRFVL S H+A PFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEV G XXXXXXXE+GATR QQ TQTGCLGGV S A GRSDTDGSEGAT+G PPEVRQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR
Sbjct:    1 MGAARSTPTLLHRCLSLLLXXXXXXQMGMVCCFVVPPHPSGGIPSIETSNSIRPLPTTATSYTTVVAASRAGAEATSCTTAIVAGTAADDSIKSQTRTTPCAGAAGASPDPFATRSEFQEFVGRRKSGSRRVVLDLRPRADFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKGWQIEEEVDLSVAACTKDPAHPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLPSGHDASPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVAGGXXXXXXXEQGATRSQQETQTGCLGGVTSGAVGRSDTDGSEGATKGNPPEVRQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR 441          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: A0A6H5L7P6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P6_9PHAE)

HSP 1 Score: 751 bits (1938), Expect = 2.570e-262
Identity = 385/441 (87.30%), Postives = 396/441 (89.80%), Query Frame = 2
Query:  419 MGAARNAPTLLHRCLSLLLLXXXQMQMGMVCSFVVPPHPSGGIPSIETSNIIRPRPTAATSYTTVAATSAAGAEVTSCTTASVVGTPADESTTSQTRTAPSVGAAGASPDPFPTPSEFQEFVGWRKSGSSRVVLDLRPREDFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKGWQIDEEIDLSVAACVKDPANPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVVGXXXXXXXXEEGATRLQQATQTGCLGGVRSRAGGRSDTDGSEGATQGKPPEVRQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR 1741
            MGAAR+APTLLH CLSLLL    QMQMGMVC F+VP  P G +PSIE SNIIRP PTAATSYTTVAA S AGA  TS T ASV GT   ESTTSQTRT PSVGAAGASPDPF  PSEFQE+VG RKSGS RVVLDLRPR DFRREHLEGSTSIP+DELEPRLLELPPPFAQPVNIVGSQQELR ARDFLTNKGWQIDEEIDLSVAACV +PA+PTEAWPTETGSTSLQVWRANDFLEFCMDRFVL SAH+AGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSG+VVG        EEGATR Q+ TQTGCLGGVRSRAGGRSDTDG EG TQG+PPEVRQRACEWSL DLRKEGSLD MRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR
Sbjct:    1 MGAARSAPTLLHWCLSLLLQLLLQMQMGMVCGFLVPSQPRG-MPSIEKSNIIRPPPTAATSYTTVAAASRAGAGATSFTMASVAGTAVGESTTSQTRTVPSVGAAGASPDPFAKPSEFQEYVGRRKSGSRRVVLDLRPRADFRREHLEGSTSIPIDELEPRLLELPPPFAQPVNIVGSQQELRMARDFLTNKGWQIDEEIDLSVAACVNNPAHPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGKVVGGSGNGGGSEEGATRSQRETQTGCLGGVRSRAGGRSDTDGREGTTQGQPPEVRQRACEWSLTDLRKEGSLDAMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR 440          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: A0A835YXG6_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG6_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.900e-49
Identity = 122/327 (37.31%), Postives = 158/327 (48.32%), Query Frame = 2
Query:  812 VVLDLRPREDFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKGWQIDEEIDLSVAACVKDPANPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVVGXXXXXXXXEEGATRLQQATQTGCLGGVRSRAGGRSDTDGSEGATQGKPPEVRQRACEWSLADLRKE--GSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSE-NLVPPWRPSRMMRWLQPARYSAKGGVS 1783
             VLDLRP E + + H+ GS+S+P+ EL PRL ELP PF  PV +VG+  +   AR  L   GW I EE D+       +          + G  S QVWR NDFL+F + ++VL    +       GL LDLGCG+GRD V++AQ+LPPG RVVGVDNH  AL+R A LA RW  D                                        GR                     C W   DLRK    SLD + A I+HGHRF  + L+   RD + + GG+F+W TF+  G E NL PP +PSRM+   +  R  + G  +
Sbjct:  173 TVLDLRPSEHYAQGHVPGSSSLPLSELGPRLYELPAPFGPPVGLVGNNAQREEARGVLEAGGWTIGEETDV-------EGGQGMAGVELQVGGESPQVWRPNDFLDFALHKYVLPDIVHGDR--RTGLALDLGCGNGRDAVFLAQKLPPGWRVVGVDNHKGALQRCAELASRWSRD----------------------------------------GR---------------------CFWLCRDLRKNTASSLDDLPADIIHGHRFMDKPLMAAARDRLPV-GGFFVWGTFMQLGEEQNLAPPHKPSRMVAHGELHRIFSSGSAT 428          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: A0A7S1J5A0_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5A0_9EUGL)

HSP 1 Score: 162 bits (409), Expect = 6.070e-39
Identity = 113/315 (35.87%), Postives = 155/315 (49.21%), Query Frame = 2
Query:  809 RVVLDLRPREDFRREHLEGSTSIPVDELEPRLLELPPPFAQP-VNIVGSQQELRTARDFLTNKGWQIDEEIDLSVAACVKDPANPTEAWPTE--TGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVVGXXXXXXXXEEGATRLQQATQTGCLGGVRSRAGGRSDTDGSEGATQGKPPEVRQRACEWSLADLRKEGSLDGMRASI--VHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMM 1738
            +V++DLR   +F+  HL+GSTSIP++EL PRL ELPPP+A+  + +VG +  L+ A++ L +KGW +++ + L  A            W  E  TG+ S+ +WR ++FLE  +D  +     + G        +DLGCGSGRD VY+AQRLP   +V GVDNH  AL R   LA+R                                     GV+                      V    C     DLRK GS+      I  VHG RF    LL  +RDH+L  GG FIWSTF++ G ENL PP++PSR +
Sbjct:  202 KVIIDLRSNAEFQTGHLKGSTSIPLEELFPRLFELPPPYAKCCMTLVGPRDGLQVAQELLESKGWAVEDAMTLQQAL---------GQWGAELETGAYSVPIWRPSEFLEEVLD--ICLENMDLGSEAAYTTAVDLGCGSGRDLVYLAQRLPSHWKVYGVDNHGNALIRSEALAQR------------------------------------AGVQ----------------------VHTLNC-----DLRKPGSMQEFYGCIALVHGARFLDRGLLLEVRDHLLADGGIFIWSTFME-GEENLAPPFKPSRRL 441          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: R1EYM2_EMIHU (Rhodanese domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EYM2_EMIHU)

HSP 1 Score: 145 bits (366), Expect = 1.830e-34
Identity = 110/317 (34.70%), Postives = 143/317 (45.11%), Query Frame = 2
Query:  797 SGSSRVVLDLRPREDFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKGWQIDEEIDLSVAACVKDPANPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVVGXXXXXXXXEEGATRLQQATQTGCLGGVRSRAGGRSDTDGSEGATQGKPPEVRQRACEWSLADLRKEG--SLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR 1741
            +G   VV+DLRPRE F + HL GS+S+P+  L  RL ELPPP   P+ +VGS  EL TAR  L  KGW+ +E           D +   E   +E+G  S  + R N FL         +SA      P  G  +D+GCGSGRD V++AQ L      +GVDNH  ALER  RLA+                                  GC  GV                           +  ++LA++RK+    L     SIVHG RF    LL  L + V+ PGG  +WSTFLD       PP+RPSR ++
Sbjct:   62 AGEPPVVVDLRPREAFEQCHLSGSSSLPLTSLRARLFELPPPGEWPLTLVGSAAELETARALLLPKGWEFEERH--------ADDSAFWEGAASESGPDSAPLLRPNAFL---------ASALRQVDLPEAGAAIDVGCGSGRDAVFLAQTLGDTWETIGVDNHKGALERAQRLAD----------------------------------GC--GV---------------------------SAAFALANVRKQSLSDLTERPISIVHGCRFLDRPLLRALPE-VVAPGGLVVWSTFLDGDGPPQAPPFRPSRRLQ 297          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: A0A5J4Z1S4_PORPP (Rhodanese domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1S4_PORPP)

HSP 1 Score: 134 bits (336), Expect = 2.500e-30
Identity = 107/335 (31.94%), Postives = 142/335 (42.39%), Query Frame = 2
Query:  788 WRKSGSSRVVLDLRPREDFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIV---GSQQELRTARDFLTNKGWQIDEEIDLSVAACVKDPANPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKG-------------LVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVVGXXXXXXXXEEGATRLQQATQTGCLGGVRSRAGGRSDTDGSEGATQGKPPEVRQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTG--SENLVPPWRPSRMM 1738
            W KS   +++LD+R    F R H+  + S P+ ELE R  ELPPP+  P  IV    S  ++  A  FLT KGWQ D    L +     D A+    + TETG  +  VWR N+FLE            ++GP P                + LDLGCGSGRD V++   LP   RV+G DNHSYALER   LA+R   D                                                               C   L D  +   L   +A +VHG RF    LL  +RDHV+  GG FIWSTF+ +   + N+ PP++  R++
Sbjct:   53 WPKS---KLLLDVRDAVAFERCHVANAVSFPLRELEQRAFELPPPYT-PARIVICGESIAQVEHAVLFLTAKGWQCDVRECLLLGT---DEASAFSRFKTETGRCTAVVWRPNEFLE---------QLFSSGPLPLSAYLRAEQQKLTEAPVALDLGCGSGRDLVFLKMHLPGRWRVMGFDNHSYALERAKALAQRASVDVE------------------------------------------------------------VCTVDLTDELQAARLP--KAHLVHGCRFLHRPLLRHVRDHVIHVGGIFIWSTFVQSAESARNMAPPYKEKRVL 309          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: A0A7S3E5W8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E5W8_9RHOD)

HSP 1 Score: 124 bits (310), Expect = 2.660e-28
Identity = 73/170 (42.94%), Postives = 98/170 (57.65%), Query Frame = 2
Query:  809 RVVLDLRPREDFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVG-SQQELRTARDFLTNKGWQID---EEIDLSVAACVKDPANPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALER 1306
            R ++D+R +E F R HL  STSIP DEL+ RLLE+PPP   P+ ++G S+  +  A++ L  KGW++     E+D+       DP              S+Q WR NDFLE  ++  VL         P +G+ +D GCGSGRD VY+AQ L  G RV+GVDNHS AL R
Sbjct:   71 RNIIDIRTKESFARGHLPCSTSIPADELQERLLEMPPPVEDPLTLLGESEDHISAAQELLVGKGWELSAVFREVDVRDDLVSTDP--------------SVQCWRPNDFLECVIE--VLKDR-----LPAEGVAIDYGCGSGRDVVYLAQMLK-GWRVIGVDNHSNALAR 218          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: A0A0G4I8J9_9ALVE (Methyltransf_25 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I8J9_9ALVE)

HSP 1 Score: 122 bits (307), Expect = 1.940e-26
Identity = 111/334 (33.23%), Postives = 143/334 (42.81%), Query Frame = 2
Query:  812 VVLDLRP-REDFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKG--WQIDEEIDLSVAA--CVKD--PANPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLV-LDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVVGXXXXXXXXEEGATRLQQATQTGCLGGVRSRAGGRSDTDGSEGATQGKPPEVRQRACEWSLADLRKEGSL--DGMR----------ASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLV----PPWRPSRMMR 1741
            V++DLR  RE      ++G+T I VDEL PR  ELPPPF   ++ +GS+ E + A+ F    G  W + E I  S A    VK+  PA+  +  P        + WRAN FLEFC+ +F       AG   G+G V LDLGCG+GRD V++A +   G RVVG DNH  AL R   L                                    G  G                              CEW   DLRK G    D  R            ++HGHRF   RLLP+ RD +L   G F+WSTF     E L     PP++  R++R
Sbjct:   61 VLIDLRSKREREETGSVDGATQISVDELTPRTFELPPPFEYRLSFLGSEDECQKAKLFTKQGGCQWTVSECITKSEAINRMVKEGAPADKFQRGPLGVN----EGWRANVFLEFCLKKFA-PVFEEAG---GEGRVALDLGCGNGRDGVFLAAKT--GIRVVGSDNHDGALARARALT--------------------------------ADLGLAG-----------------------------LCEWKQCDLRKNGKSVEDCQRELLREDRSESVGLIHGHRFLERRLLPVCRD-LLACRGLFVWSTFASVDGEILEERPGPPYKAGRLLR 322          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: A0A7S4B270_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B270_CHRCT)

HSP 1 Score: 116 bits (290), Expect = 4.710e-26
Identity = 71/174 (40.80%), Postives = 96/174 (55.17%), Query Frame = 2
Query:  812 VVLDLRPREDFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQQELRTARDFLTNKGWQIDEEIDLSVAACVKDPANPT--EAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTR--VVGVDNHSYALERGARLA 1321
            +V+DLRP +DF + HL GS S+P DELE  + +LPPP    + +VG ++EL+ A D L  KGW  D          V+D  +P        E+GS+  Q WR N FL   +    L  + ++      GL +DLGCG GRD V++AQ     TR  V G+DNH  AL+RG  LA
Sbjct:   22 IVVDLRPTDDFVKGHLPGSCSLPFDELERCMWQLPPPGEWNLALVGREKELQRACDLLRPKGWNPD----------VRDADDPAVFRTEQVESGSSMAQSWRPNSFLHAVVHAMPLRYSQHS------GLAVDLGCGGGRDAVFLAQHFRERTRWSVCGIDNHRGALQRGRDLA 179          
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Match: A0A7S2ZA17_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZA17_9RHOD)

HSP 1 Score: 114 bits (284), Expect = 2.090e-24
Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 2
Query:  866 STSIPVDELEPRLLELPPPFAQPVNIVG-SQQELRTARDFLTNKGWQID---EEIDLSVAACVKDPANPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLSSAHNAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAER 1327
            STSIP DEL+ RLLE+PPP   P+ ++G S+  +  A++ L  KGW++     E+D+       DP              S+Q WR NDFLE  ++  VL         P +G+ +D GCGSGRD VY+AQ L  G RV+GVDNHS AL RG  LA R
Sbjct:    3 STSIPADELQERLLEMPPPVEDPLTLLGESEDHISAAQELLVGKGWELSAVFREVDVRDDLVSTDP--------------SVQCWRPNDFLECVIE--VLKDR-----LPAEGVAIDYGCGSGRDVVYLAQMLK-GWRVIGVDNHSNALARGEGLARR 138          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig153.3070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQG6_ECTSI4.580e-26689.80Tellurite resistance methyltransferase, TehB, core... [more]
A0A6H5L7P6_9PHAE2.570e-26287.30Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YXG6_9STRA1.900e-4937.31Rhodanese domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1J5A0_9EUGL6.070e-3935.87Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]
R1EYM2_EMIHU1.830e-3434.70Rhodanese domain-containing protein n=1 Tax=Emilia... [more]
A0A5J4Z1S4_PORPP2.500e-3031.94Rhodanese domain-containing protein n=1 Tax=Porphy... [more]
A0A7S3E5W8_9RHOD2.660e-2842.94Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0G4I8J9_9ALVE1.940e-2633.23Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A7S4B270_CHRCT4.710e-2640.80Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S2ZA17_9RHOD2.090e-2443.67Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig153contigE-siliculosus-1a_F_contig153:31683..35949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size267
Model size2969
Exons5
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03029
Best eggNOG OGNA|NA|NA
Best tax levelPythiales
COG Functional cat.S
EggNOG OGs1MI3S@121069,2E4K7@1,2SBFX@2759
EggNOG free text desc.Coiled-coil-helix-coiled-coil-helix domain containing 8. Source PGD
KEGG Pathwayko04714,map04714
KEGG koko:K18177
Seed eggNOG ortholog115417.EPrPW00000013995
Seed ortholog evalue2.7e-18
Seed ortholog score97.8
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig153.3070.1prot_E-siliculosus-1a_F_contig153.3070.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig153 31726..32337 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928039.725559-UTR-E-siliculosus-1a_F_contig153:31682..317251622928039.725559-UTR-E-siliculosus-1a_F_contig153:31682..31725Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 31683..31725 +
1696318783.4224586-UTR-E-siliculosus-1a_F_contig153:31682..317251696318783.4224586-UTR-E-siliculosus-1a_F_contig153:31682..31725Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 31683..31725 +
1622928039.7732518-UTR-E-siliculosus-1a_F_contig153:32337..329851622928039.7732518-UTR-E-siliculosus-1a_F_contig153:32337..32985Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 32338..32985 +
1696318783.450648-UTR-E-siliculosus-1a_F_contig153:32337..329851696318783.450648-UTR-E-siliculosus-1a_F_contig153:32337..32985Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 32338..32985 +
1622928039.7875283-UTR-E-siliculosus-1a_F_contig153:33403..335551622928039.7875283-UTR-E-siliculosus-1a_F_contig153:33403..33555Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 33404..33555 +
1696318783.4582925-UTR-E-siliculosus-1a_F_contig153:33403..335551696318783.4582925-UTR-E-siliculosus-1a_F_contig153:33403..33555Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 33404..33555 +
1622928039.8026857-UTR-E-siliculosus-1a_F_contig153:33769..343041622928039.8026857-UTR-E-siliculosus-1a_F_contig153:33769..34304Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 33770..34304 +
1696318783.4658828-UTR-E-siliculosus-1a_F_contig153:33769..343041696318783.4658828-UTR-E-siliculosus-1a_F_contig153:33769..34304Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 33770..34304 +
1622928039.8512993-UTR-E-siliculosus-1a_F_contig153:34625..359491622928039.8512993-UTR-E-siliculosus-1a_F_contig153:34625..35949Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 34626..35949 +
1696318783.476553-UTR-E-siliculosus-1a_F_contig153:34625..359491696318783.476553-UTR-E-siliculosus-1a_F_contig153:34625..35949Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig153 34626..35949 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928039.7415838-CDS-E-siliculosus-1a_F_contig153:31725..319231622928039.7415838-CDS-E-siliculosus-1a_F_contig153:31725..31923Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig153 31726..31923 +
1696318783.4315379-CDS-E-siliculosus-1a_F_contig153:31725..319231696318783.4315379-CDS-E-siliculosus-1a_F_contig153:31725..31923Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig153 31726..31923 +
1622928039.7581213-CDS-E-siliculosus-1a_F_contig153:32268..323371622928039.7581213-CDS-E-siliculosus-1a_F_contig153:32268..32337Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig153 32269..32337 +
1696318783.4425328-CDS-E-siliculosus-1a_F_contig153:32268..323371696318783.4425328-CDS-E-siliculosus-1a_F_contig153:32268..32337Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig153 32269..32337 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig153.3070.1

>prot_E-siliculosus-1a_F_contig153.3070.1 ID=prot_E-siliculosus-1a_F_contig153.3070.1|Name=mRNA_E-siliculosus-1a_F_contig153.3070.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=89bp
MGSEVSRRPPVPPAVIPDQHQGSKSDFGEEVDIEEAIDKSGCSSIYYRLE
DCLGEHDRDWRRCQEQVKALKACNDKKNRARAAALKEP*
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mRNA from alignment at E-siliculosus-1a_F_contig153:31683..35949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig153.3070.1 ID=mRNA_E-siliculosus-1a_F_contig153.3070.1|Name=mRNA_E-siliculosus-1a_F_contig153.3070.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4267bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig153:31683..35949+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCGCGCCGCACGATCGTGTTGCACCACACCCACCGGTTAGCTGATGGGCT CTGAGGTTTCTCGCCGCCCCCCTGTGCCCCCTGCAGTCATTCCCGATCAG CACCAGGGGTCGAAGAGTGACTTTGGTGAGGAGGTGGACATCGAAGAGGC CATCGATAAGTCTGGTTGCTCGTCCATCTACTACCGTTTGGAGGACTGCC TCGGAGAGCACGATCGAGACTGGCGACGGTGCCAAGAGCAGGTGCGACAG CAGTCCAGGCGCAACTACCGGACAGAAGTCGTGCTGGCTTGCCTGTTTTT GTGCAGACAACGCATGTGGCAACCCAGGTGTACGTAGACAGACTACAGGA CCCCGGCAGTAGTGCTGCAAGAGCACAGCACAGTGATGTTCAACATGAGT TACGGTCACCGCAGGATCCTCGGCAGGTGAGCGAACGCCACGGTGGCATC TACTAGGGAACGCCGCGGTGGCATCTACTAGGGGAGTGGAATGAGGTCGC TCGCATATGTAGTTGGTTTGACGTATTCGACGCCCCTACTGCTGTGCCTG TTCCCGTCGGACCCCATCGCCCCTTCTGTGTTTCAGGTTAAAGCTCTCAA GGCGTGCAACGACAAGAAGAACAGGGCACGGGCTGCCGCGCTGAAAGAAC CTTAGTAGGACCGCAGCCAGCAAGCCGGCCTCCCCCCTGCCTTAGGCCAC CACACCCTGCCTGTGCCGGGGAAGTGTGCTCGCTGCACACCCGTCCTTTT TCGTGTTCCCTAGATGGGTGCGGCAAGGAACGCACCGACGCTGTTGCACC GGTGCCTCTCGCTCCTCCTGCTCCTTCTGCTGCAGATGCAGATGGGCATG GTGTGTAGCTTTGTGGTTCCTCCGCATCCAAGCGGTGGAATACCAAGCAT TGAAACGAGCAACATTATCCGGCCGCGCCCCACCGCCGCCACCTCGTACA CAACCGTAGCCGCAACGTCCGCAGCCGGGGCTGAGGTGACGAGCTGCACC ACCGCGAGCGTGGTAGGAACACCAGCAGACGAGTCGACTACGTCTCAGAC GCGGACAGCACCATCCGTCGGAGCAGCGGGAGCGAGTCCTGATCCTTTCC CGACGCCATCAGAGTTCCAGGAGTTTGTGGGGTGGCGCAAGTCGGGCTCC AGCAGGGTGGTGCTCGACCTTCGGCCTAGGGAGGACTTTCGTCGGGAGCA CCTCGAGGGATCAACGTCCATCCCCGTCGACGAGCTGGAGCCCAGGCTCT TGGAGTTGCCCCCTCCCTTCGCCCAGCCAGTGAACATTGTCGGCAGCCAA CAGGTATGCACACGTCTCTTTTAGAGCAAGTCACTTTGCATAGTCTGAAT TCCCACGCAATTGACGAGCACTGCTGCTGCATATGTTGATGGCAGTATGG GTCATGCCCGTTGTTGTCCGTAACTGGACCGCAGCTATTATTCCATTAGG AGCCTACAGTAGCCGTCATCACGGTTGTGAACTATGCAGTTGACGCCTTC ATGTCCCCCTTACATGTGCACAAACCCGGGACCTCGGAGATGGATTTATC GTTTTGAAGAAATTCCGTAACGGTGAAGCTGCGCGAACAACTAAGAGAGT TGCAAACCAAAACTGCAGGCTAAAATTCGCTGGAGGAAATAAGTTTGGCA AAACGGCGAAAGAGCGTGTGTTTGGTTCCTAAGAAACTTGGGTAAAATGA TGGGTGCCTGTATTTCCGCAGGAGCTTCGTACGGCGAGGGACTTCCTCAC GAACAAAGGCTGGCAGATCGACGAAGAAATAGACCTGTCAGTGGCAGCTT GTGTAAAAGACCCGGCAAATCCAACTGAAGCCTGGCCCACCGAAACTGGG TCGACTTCCCTCCAGGTATGGAGGTGAGAAGCCACAGGAGGCTGAGAAAC GTTTCCTCATTGTTGGTCTCATGTTTTGGCGGGGGGGAGCGGGGTCGAAT GCTCTTTCCTTGCGTTTTTTTTATTCATTTTTATCGTCGTGCGGCATTAT CTCCCTGAGAAACCTTCCTGTACCCGTTCCTACCCTGCACCGCTTAGCAC ACACGCTGCCGCTGTTGCTCTGCTGTTTCTTGGTCAGGGCAAACGATTTC TTGGAGTTTTGTATGGACCGCTTCGTGCTGTCTTCGGCCCATAACGCCGG CCCTTTCCCCGGCAAAGGCCTGGTCCTAGACTTGGGCTGTGGCAGCGGCC GTGACACTGTCTACATGGCGCAGCGCCTGCCTCCTGGCACCCGCGTAGTC GGGGTCGACAACCACTCGTACGCTCTGGAAAGGGGCGCGAGACTGGCCGA ACGGTGGCTGGAAGACACGTCTTCGGGGGAAGTTGTTGGTGGCAGTGGTG GAGGTGGCGGCAGCGAAGAAGGCGCGACACGATTGCAACAAGCAACCCAG ACCGGCTGTTTGGGAGGAGTTAGAAGTCGGGCTGGCGGACGGAGCGATAC CGACGGCAGCGAAGGGGCAACGCAGGGAAAACCCCCGGAAGTACGACAAA GGGCGTGCGAGTGGTCGCTCGCCGACCTCAGGAAAGAGGGTTCGCTTGAC GGAATGCGGGCTTCCATTGTCCACGGGCACCGGTTCAAGTGCGAGCGTCT GTTGCCTCTACTTCGAGATCATGTGAGGAGCACGTGGAATACGCATTGGC CCTTTGCCTCGTTGACTTGTCCATGTCCGTCCCACACACTGGTGATAAAA GTTATCAAGGCATCTACAAACCTGACTGCGCTGTCGGTGGTGAAAAGCTT GGGGTCCCAGGACTGGAGCTCGAACTATGTCCTGGTATTGCTTTTTGTCG CGTCCTTTGTGGAGCTCGTATCATATCGTTGGTTGCCATGCACTTCTCCT TTCCCTTTTACGGCAAACCTAAAGTCCATGCACACGTGCTCAGCTAGCCC GTTCGCCCATTCATACGTTTATCTCCGCGCTTGTTGTACACAGGTGCTGC TCCCAGGGGGCTATTTCATCTGGTCTACGTTTTTGGACACGGGATCGGAG AATTTGGTGCCGCCGTGGCGACCGAGTCGCATGATGAGGTGGTTACAACC CGCGCGTTATTCGGCCAAAGGCGGCGTGTCTCGTGGTGATTGGTCGAGTC GGCTCTGGGGTTTGCCTCCTCATACGGCTTGTCCGTCTTCGCGCTTCAAT ATATGAATCACGGTTGTTTTGAAGGGGTTGTGGGTCCTGCCGGAAAGGAG GCCCTCTCCTGTTCGCCTTTCTGCATCGTCCGGATCGTTCTCTAGGGTTT CGTGCTTCACAAATTTTCACAAAGAATGATGCCCGTTTGTGGAGCAAAGC GTTGGCAGTCAGCAATTGTAGACTGCTGTTGACGCTACCCGCTTGGGCAA AGACAGCCACGCAAGCACGCCAACCACACCTCTCGTTCAGGGTGAAAACT TGACTGACTCCTTTTGTTCTATTTCGCCATCTCTGTCCCCTGCCTGCGCA AACTCACCGTTTCCTCATGCGCACCACCAAACTTTTTGCTGGGCCCGGTT TCTTGTCAAGACCCGGCGAGCTGGCGGACATCTTCTCTGGCGATGGTTTC GAGATCCTGGTGGACGAACAAGGGGAACTACCCACGCGGGGCTCCACGGT GCCAGCGAATTTCTTTGCCTGTCGAAAGCGACCGACGGTACCGACGAAGG AATTCTGATGCTGCTACTGTACTAATTTGCTGCTGCTTGTTGCGTCCCAG AGAGGTGCTGTACAATTCGTTTGAGACCATGTCTGGGGTGCTGCATTCGA AGCAGCTTCCAGTGTTGCGGCCCCCGCTGTTTGTGAGGCTCCTTGTTGAT GCCGCAGTTGAAAGGTTGTCGTATACTTTTTGGGGGCACATTGTGTTTTT TTATTCCGCTCGGTTCGCCGGTCGCTCACCCTTGTATGGCGAGGGTGCGT ACTGCACGCGCTGGATGTGCGCGCGCAACGCGGTGTATCCGTGAGCGGTA TCGCCCACGTTTCAGAATGTGTTGGGATGGAGATGTGGATGAACGTGTGA GTCCGTTCTCGTGCAAACGTTGTCGAGCTCTGCGCTGCGATCGCTTTTCC CATACCGATCCTCGTAAGTTGGCCAGCCCTGTAGACTAATGTACAACGCT TTTTTTTGTGGTCCCTCCGCGACACTGAGGGTGGCGCACCTGCGTTCGGT TGTGCAACTGCCCCCCGGCTGGTCGGCTCCATGTGACGCGGAACGTCGGA GGTACATCCATGAAAAAACGCATGGTACCAGAGGTTGGGAGCAATATTTT AAATAGATAAATTCGAT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig153:31683..35949+

>mRNA_E-siliculosus-1a_F_contig153.3070.1 ID=mRNA_E-siliculosus-1a_F_contig153.3070.1|Name=mRNA_E-siliculosus-1a_F_contig153.3070.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=534bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig153:31683..35949+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGCTCTGAGGTTTCTCGCCGCCCCCCTGTGCCCCCTGCAGTCATTCC
CGATCAGCACCAGGGGTCGAAGAGTGACTTTGGTGAGGAGGTGGACATCG
AAGAGGCCATCGATAAGTCTGGTTGCTCGTCCATCTACTACCGTTTGGAG
GACTGCCTCGGAGAGCACGATCGAGACTGGCGACGGTGCCAAGAGCAGAT
GGGCTCTGAGGTTTCTCGCCGCCCCCCTGTGCCCCCTGCAGTCATTCCCG
ATCAGCACCAGGGGTCGAAGAGTGACTTTGGTGAGGAGGTGGACATCGAA
GAGGCCATCGATAAGTCTGGTTGCTCGTCCATCTACTACCGTTTGGAGGA
CTGCCTCGGAGAGCACGATCGAGACTGGCGACGGTGCCAAGAGCAGGTTA
AAGCTCTCAAGGCGTGCAACGACAAGAAGAACAGGGCACGGGCTGCCGCG
CTGAAAGAACCTTAGGTTAAAGCTCTCAAGGCGTGCAACGACAAGAAGAA
CAGGGCACGGGCTGCCGCGCTGAAAGAACCTTAG
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