mRNA_E-siliculosus-1a_F_contig1528.3054.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1528.3054.1
Unique NamemRNA_E-siliculosus-1a_F_contig1528.3054.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: A0A6H5K7Z6_9PHAE (DUF4440 domain-containing protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Z6_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 7.790e-137
Identity = 204/217 (94.01%), Postives = 210/217 (96.77%), Query Frame = 3 
Query:  105 MMNFGKMPAGRTASRLARVVGKSEASIQSSVRAG-SMNALLSTRSGLTVTQAATRLAIAKLPVRHMSGQADYAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPAQH 752
            MMNFGKMPAGRTASRLARVV KSE+SIQSSVRAG SMNALLSTRSGLTVTQAATRL   KLPVR MSGQADYAANYT+DQKAVDAATR+WRDTVTSNTEDAPKKTAAIYADDALFWGTVSE+VRNTP HVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAM+ETRARFTFAYRRENGKWVM+EHHSSAMPKAPPGLKPAQH
Sbjct:    1 MMNFGKMPAGRTASRLARVVSKSESSIQSSVRAGGSMNALLSTRSGLTVTQAATRLTAVKLPVRQMSGQADYAANYTSDQKAVDAATRNWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEQVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQH 217
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BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: A0A6H5K6U8_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 1.030e-102
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 3 
Query:  297 MSGQADYAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPAQH 752
            MSGQADYAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTP HVYDYFDFFARMPKLSMVAYDPAPPRIHGDFA+HAGAYTFAWAGADGAM+ETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPAQH
Sbjct:    1 MSGQADYAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPAQH 152
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BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 6.490e-49
Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = 3 
Query:  330 TADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGK------WVMIEHHSSAMPKAPPGLKP 743
            T DQKAV A T  W+DTVT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G+FA+ AG YTFAW G DG   E RARF+F +RR  GK      W ++EHHSS+MP AP  LKP
Sbjct:  291 TPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRR--GKPGSPQPWTIVEHHSSSMPIAPAELKP 432
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BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 3.730e-48
Identity = 89/144 (61.81%), Postives = 106/144 (73.61%), Query Frame = 3 
Query:  330 TADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENG----KWVMIEHHSSAMPKAPPGLKPAQ 749
            T DQKAV A T  W+DTVT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G DG   E RARF+F +RR+       W ++EHHSS+MP AP  LKP +
Sbjct:  285 TPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVE 428
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BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.060e-46
Identity = 87/141 (61.70%), Postives = 106/141 (75.18%), Query Frame = 3 
Query:  330 TADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGK----WVMIEHHSSAMPKAPPGLK 740
            T D KAV   T  W++TVT  TEDAPKKTAA+YA+DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G DG   E RARF+F +RR++ +    W ++EHHSS+MP AP GLK
Sbjct: 1415 TPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLK 1555
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BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 6.310e-46
Identity = 88/143 (61.54%), Postives = 105/143 (73.43%), Query Frame = 3 
Query:  330 TADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGK------WVMIEHHSSAMPKAPPGLK 740
            T DQKAV   T  W+DTVT  T+DAPKKTAA+YA DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL ++ Y PAP R++G+FA+ AG YTFAW G DG   E RARF+F +RR  GK      W ++EHHSS+MP AP  LK
Sbjct:  320 TPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRR--GKPGSPRPWTIVEHHSSSMPDAPAELK 460
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 2.140e-45
Identity = 83/141 (58.87%), Postives = 103/141 (73.05%), Query Frame = 3 
Query:  330 TADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGK----WVMIEHHSSAMPKAPPGLK 740
            T + KA    T  W+DTVT  TEDAPKKT+A+Y +DA+ WGTVSEEVR TP  +YDYFDFFAR+PKL +V Y PAP R++G FA+ AG YTFAW G D    E RARF+F +RR++ +    W ++EHHSS+MP AP GLK
Sbjct:  290 TPEMKAGSETTIVWKDTVTLGTEDAPKKTSALYPEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYSPAPARVYGQFAVQAGTYTFAWQGNDDETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPAGLK 430
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BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.210e-44
Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 3 
Query:  330 TADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGK---WVMIEHHSSAMPKAPPGLKPA 746
            T DQKAV A    W+DTVT  T+D P+KTA +YA DA  WGTVSEEVR+TP  +Y YFD+FAR+P L +V Y P   R++GDFA+ AG YTF+W   DG   E RARF+F +RR+  K   W ++EHHSS+MP AP GLKPA
Sbjct:  184 TPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRDPSKPQQWAIVEHHSSSMPTAPAGLKPA 325
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.950e-43
Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 3 
Query:  330 TADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGK---WVMIEHHSSAMPKAPPGLKPA 746
            T DQKAV A    W+DTVT  T+D P+KTA +YA DA  WGTVSEEVR+TP  +Y YFD+FAR+P L +V Y P   R++GDFA+ AG YTF+W   DG   E RARF+F +RR+  K   W ++EHHSS+MP AP GLKPA
Sbjct:  329 TPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRDPNKPQQWAIVEHHSSSMPTAPAGLKPA 470
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.370e-41
Identity = 79/165 (47.88%), Postives = 105/165 (63.64%), Query Frame = 3 
Query:  255 AATRLAIAKLPVRHMSGQADYAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGK---WVMIEHHSSAMPKAPPGLK 740
            AAT + +  +PV   +G    AA    D+K V+  T  W++ VT  T DAP+KTA +YA D + WGTVSEEVR+TP  +YDYFD+FAR+P L +  + P   R++GDFA  AG YTF W G DG   E RARF+F +R +      W ++EHHSS+MP +P  LK
Sbjct:   80 AATAMGLTAVPVTRSAG----AAVTEGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLK 240
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1528.3054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7Z6_9PHAE7.790e-13794.01DUF4440 domain-containing protein n=7 Tax=Ectocarp... [more]
A0A6H5K6U8_9PHAE1.030e-10298.03DUF4440 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JT29_9PHAE6.490e-4963.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF8_ECTSI3.730e-4861.81Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE1.060e-4661.70Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0Z5_9PHAE6.310e-4661.54PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FN21_ECTSI2.140e-4558.87Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JX02_9PHAE1.210e-4457.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF9_ECTSI1.950e-4357.75Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JSB2_9PHAE2.370e-4147.88DUF4440 domain-containing protein n=2 Tax=Ectocarp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1528contigE-siliculosus-1a_F_contig1528:9403..13879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size651
Model size1448
Exons6
Ec32 orthologEc-18_003590.1
Ec32 ortholog descriptionDomain of unknown function DUF4440
Hectar predicted targeting categorymitochondrion
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2S0Y2@2759,COG4875@1
EggNOG free text desc.SnoaL-like domain
Seed eggNOG ortholog2880.D8LIH9
Seed ortholog evalue1.2e-117
Seed ortholog score429.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1528.3054.1prot_E-siliculosus-1a_F_contig1528.3054.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1528 10586..13775 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928037.7905087-UTR-E-siliculosus-1a_F_contig1528:9402..100641622928037.7905087-UTR-E-siliculosus-1a_F_contig1528:9402..10064Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1528 9403..10064 -
1696318782.5929663-UTR-E-siliculosus-1a_F_contig1528:9402..100641696318782.5929663-UTR-E-siliculosus-1a_F_contig1528:9402..10064Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1528 9403..10064 -
1622928037.8091502-UTR-E-siliculosus-1a_F_contig1528:10554..105851622928037.8091502-UTR-E-siliculosus-1a_F_contig1528:10554..10585Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1528 10555..10585 -
1696318782.60831-UTR-E-siliculosus-1a_F_contig1528:10554..105851696318782.60831-UTR-E-siliculosus-1a_F_contig1528:10554..10585Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1528 10555..10585 -
1622928037.891809-UTR-E-siliculosus-1a_F_contig1528:13775..138791622928037.891809-UTR-E-siliculosus-1a_F_contig1528:13775..13879Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1528 13776..13879 -
1696318782.6686668-UTR-E-siliculosus-1a_F_contig1528:13775..138791696318782.6686668-UTR-E-siliculosus-1a_F_contig1528:13775..13879Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1528 13776..13879 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928037.8246539-CDS-E-siliculosus-1a_F_contig1528:10585..105971622928037.8246539-CDS-E-siliculosus-1a_F_contig1528:10585..10597Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 10586..10597 -
1696318782.6192653-CDS-E-siliculosus-1a_F_contig1528:10585..105971696318782.6192653-CDS-E-siliculosus-1a_F_contig1528:10585..10597Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 10586..10597 -
1622928037.8379097-CDS-E-siliculosus-1a_F_contig1528:10982..112221622928037.8379097-CDS-E-siliculosus-1a_F_contig1528:10982..11222Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 10983..11222 -
1696318782.6283333-CDS-E-siliculosus-1a_F_contig1528:10982..112221696318782.6283333-CDS-E-siliculosus-1a_F_contig1528:10982..11222Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 10983..11222 -
1622928037.8505173-CDS-E-siliculosus-1a_F_contig1528:11616..117831622928037.8505173-CDS-E-siliculosus-1a_F_contig1528:11616..11783Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 11617..11783 -
1696318782.6385562-CDS-E-siliculosus-1a_F_contig1528:11616..117831696318782.6385562-CDS-E-siliculosus-1a_F_contig1528:11616..11783Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 11617..11783 -
1622928037.8671477-CDS-E-siliculosus-1a_F_contig1528:12429..124571622928037.8671477-CDS-E-siliculosus-1a_F_contig1528:12429..12457Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 12430..12457 -
1696318782.6501722-CDS-E-siliculosus-1a_F_contig1528:12429..124571696318782.6501722-CDS-E-siliculosus-1a_F_contig1528:12429..12457Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 12430..12457 -
1622928037.8805268-CDS-E-siliculosus-1a_F_contig1528:13571..137751622928037.8805268-CDS-E-siliculosus-1a_F_contig1528:13571..13775Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 13572..13775 -
1696318782.659428-CDS-E-siliculosus-1a_F_contig1528:13571..137751696318782.659428-CDS-E-siliculosus-1a_F_contig1528:13571..13775Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1528 13572..13775 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1528.3054.1

>prot_E-siliculosus-1a_F_contig1528.3054.1 ID=prot_E-siliculosus-1a_F_contig1528.3054.1|Name=mRNA_E-siliculosus-1a_F_contig1528.3054.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=217bp
MMNFGKMPAGRTASRLARVVGKSEASIQSSVRAGSMNALLSTRSGLTVTQ
AATRLAIAKLPVRHMSGQADYAANYTADQKAVDAATRHWRDTVTSNTEDA
PKKTAAIYADDALFWGTVSEEVRNTPAHVYDYFDFFARMPKLSMVAYDPA
PPRIHGDFAIHAGAYTFAWAGADGAMSETRARFTFAYRRENGKWVMIEHH
SSAMPKAPPGLKPAQH*
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mRNA from alignment at E-siliculosus-1a_F_contig1528:9403..13879-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1528.3054.1 ID=mRNA_E-siliculosus-1a_F_contig1528.3054.1|Name=mRNA_E-siliculosus-1a_F_contig1528.3054.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4477bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1528:9403..13879- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTGCCTTCTTCGTTCCCCCCACCCCCACGGCTCACAACGACACGCACCCA
CCTCTGTCAGCAACATCACTCCACCGACCTTCCACCGTCCGACGAAAGAA
CATCATGATGAACTTTGGAAAGATGCCCGCCGGAAGGACTGCATCCAGGC
TGGCAAGGGTCGTCGGCAAGAGCGAGGCCAGCATCCAGAGCAGCGTCCGA
GCCGGCTCGATGAACGCCCTGCTGTCGACGAGGTCGGGCCTCACCGTCAC
CCAGGCAGCGACCAGGCTTGCCATCGCGAAGCTCCCGGTCAGGCACATGT
CTGGACAGGTGAGGGGATGTGCGCCAACTGCTGTGGCGGCGCGTCTGGAT
GCGCTAGGTATCTCGTGTGTTTGATCGTTCCTGTCTTGTGCGCATGTAGA
CCATGCGGTGTGTTTATGAAGGGACTCGTGTTCCGTCGCGTCACACGCTT
TCTTCGGCTACATTTGATGGATAATGAACTGTCAAGGCTCACCCGCGCTT
CGTTGGATGCTACTTGAAGACACGCACACTCTCCAGACTCGACAGTACCA
TGTCAACGTCAAACTGCGGCAAAACGCTTATGTACAACCCTCACCGGCGG
CGCATTTGACTTGTCATCTCGCGCCCGTTCGCCTGATGTTGCGCCGTGGT
CGTGCGGGGTGTTGCGCAAGCATGAACTCGTCACCATTGACACTTGGGAT
CCCCAACACACAAGCGTAACCCTGTAGTCTATTAGGATCGTTTTCATCTA
CAGGTTCAAAACTGAACCCCCTCGATCGCCCACTTCCGCCACATGAGCAT
GATCACGTTGTTGTTGGTAAGGCGTATTCGCGCTATTTCGGGGCTCACGA
AAAGTATGCGTATGGTTTTCATCTTTTGTCATGTACCATGACGGCGTGCG
CGCGCCAAAGTGCCTTGCCATGTTTTCCAATACCCCCCGCGCAACCCTTT
TGTCTGTTAGGATCCCCTTCACCGAGAGCTCGTAACTGTACCTACTTCTC
CATTCGCTACACAAACATGCAGCACATCCATGAAGGTTTCGTTGGAAAAA
GTGGTTCGTCTCTCGGGCCTCTTCGCATCACTTTTTTGTTTTGTTTGTTT
TTCTGTCGTTTGGTTCCATCATGATGTGCGCGCGCCCAAACTGCCTTGCA
TTTTTCTCAATATTAATATTCGTAGTGTACCCCTGTCACATGTCGGCACA
GGCAGGCGCCCTGGCGGTTCCCGTACTCGAAACTCTTGAGAGCTTTGTGG
TCAATTGAACTGAAATTGGTCATTTAGCGCGCTGCTTAGCAGTGCAATCT
AGCCGTGCGAGTGCGGCAAACCGGTAAACTAACCTCCCGAACGCGCTCGC
TTTTTTTCCCTGAACATGGTGAAACATTGTGCGCTGGCGATCACGGGACT
TGACGCGGACGGACCTTCTCAGGCCGACTACGCGGCCAACTACACCGCTG
GTGAGTCAACCAGTAGCTTATGGTTGCTGCCTCATTGACCGTTGCATTCT
GCCGCTGCTGCTGTAAAGATGGTGTGTTCTCGCCGCAGGCGTCGTTTGCC
GCTCTGTGTTCGTTGCCCCTTGTCTTTTTCTTTGTTTCTTGCCTATCGCC
GTTTCTGAAATCTTTTCAGCCACCAAACCACCGAAGCGAATCGGACCGAC
CATTTCAAATATTTGGCGGTCACCTTTTGTGTGCTTTCCTCCGCTTCGAT
GTAGTGTACTTCTAGACATCCCCTTGAGCGATTTTCAAAACTCGTCACTT
CGCAAAGCGGGTGACGGTGCTGAAAACGTCGGAGTTGTAACCATCTGGTG
GACAAAAGTTCCGAAAACGCATAATTTGATTCGCCATGTTGTCTTCGTTG
TGGAGTAAGTTTTAGCACAAAGCCCCAGGATACAAACGAAAAAGGCGGAA
ACCTCTGTAAGTCGTTGGTTTCGTATAGATGTCCACCGGTGGCGCCTTCC
TTGTCGGTTGGTCTGATACGAAGGTTCGTCCCGTATGCGCTGTATCTCTC
TCTAGCTGTATTTTACTTGGGTGTCGAGCGATCAAAGTGAGCGTTCATCT
CACATGCGCCTGTACCTGTACTCTCGTTGCTGTGTCGGGTGAACAGACCA
GAAGGCCGTGGACGCCGCGACTAGGCACTGGAGGGACACGGTGACCTCCA
ACACCGAGGACGCTCCCAAGAAGACCGCCGCCATCTACGCTGACGACGCG
CTGTTCTGGGGAACGGTCTCGGAGGAGGTCCGCAACACGCCCGCCCACGT
CTACGACTACTTCGTGAGTGCAAGTCTTGGGAAGAAAGTTGCGACTTTTA
CAGCAGTACTGCTGTATGTAGCAGGTAGGAACAACCTTCGCGTATGGAAT
GTGCGTTTGCGTTGTCTGTAGTTGTCCTTCGTGCAGCATGTTGGCGATAA
CCATCGCGTGAGGTGTAATCTGCGTGTTTCATGGCCTGTAGTTGTCCTCG
GCACGTGATGTAGCGTCGTGGCGTGGATTGATCTTGACCCTGTGATAATT
TTGTCCATATTTTGTGTTTTGGCGGCCTCCTCGGGCAGGCATGAAAAATT
TTGCATCACCCACGTCATTTTCCAAGCTTGAAACACCCGCTCAAGATTGT
GAACCATACTCTCGACTTCGCACCTCTGCCCCGCCCGCTTCTCTTCCCTC
CACACAGGACTTCTTTGCCCGCATGCCCAAGCTCTCCATGGTCGCGTACG
ACCCGGCGCCCCCGCGCATCCACGGGGACTTCGCCATCCACGCCGGCGCC
TACACCTTCGCCTGGGCGGGAGCGGACGGGGCCATGAGCGAGACGCGGGC
GCGCTTCACGTTTGCGTACCGAAGGGAGAACGGCAAGTGGGTGATGATCG
AGCACCACTCGTCCGCGATGCCCAAGGCGCCCCCGGGGCTCAAGCCCGTG
AGTATTTTAGAGGGGCCGTAGCAGAAGGAGGTCTGAGTAGTCGTCCCGTG
TTGACTTGACTTTTTTGTTCTGTGTTTTTCGTGCTGTCACGAGAGCGTCT
CTTGCCGATATGAGGTAAGGGTGGAATAGAGTTAGGAAAGCGTTCGTTGC
GTTGTGATAACCAATTCTTACGACACATCCATCTCTTGCGTTGTTACATT
TTGTATTTGTGATGTTTTGAGTGAGGTGGTCGACCACGCCGACACCTGAC
ACTTTGTATAGGCTCCCCTCCTGCTGCGGTCGTGTGTGGGGAGGTCGTTC
TCGTGAGTCTTTGCCCTAGCGTCCGATAGCTCCACACTAAACCAAGCGAT
CCCGACCGCGACGCCATTCCGCTGTCGCGCAGGCCCAGCACTAAGATGCC
TCCGGAGATGAAGACGCAGACAGACGTGAGTTTCCAGTGTAGGCGTGGAT
ATGATATGTCGTCCTCTTCTGCATCGATCCAGCGACATACTTCCCTTTCT
TGGTCCCGCCCGCATTTGGGCCTTTGAGTGTGTGCAATTGCTTCCGTTGT
CGGCCGCTGTCACTGCGTTGGGTGTGCAGGTAGCTCCCGCTCTTGAGAAC
GTGGTACAAACAGTTAACTCGAGCCTCGAACAATGTCTTTGAACATCCCT
AAGCCCGGGTGAGAATGCCTAAGCAGCTATTGGTGGAGACAACTGCTGTA
TCAATGTTTCTCGTGTCTCTCGCCCCCAGAGCTTGCACTCTTCGCAAAAT
CCAAGAAAAACATCGAACGAAGCGTGCTCTCAGATGTCTTTCTTTCTTAG
TGACCGACCGCGATACTGATACTAGTCATTCGACCTGAAACTGAACATCC
CCTTTGCCCGATCTCCCCTTCCACTTCTATGTTTGTTTGTGTGTGCCACG
GTCTCAACTCCACAGGCGTTCACTCACGCCCAGCAAGCACCTGGTCGATT
AGGAATGGCGAGCGGGCGGGCAGCAGGCACAAGGGAACTACCTCGAATCT
CGTAAATACCTTGATTCGTTTTTAATGATGCCGGATTAGCGATAGCTCGT
CTAGATAGAAGCAGGTCTGGAGCGCCTGAACCTCTGTTGATGCGGCTTTC
AACGGAGGATTTATGTAGCACATTGGGCGTGCGCCGATGTGTCGTGATGG
AGGAAGGATTTTTGGGGCCAGCAGTTGACATTTTCCAAGCTAGCACTCTG
GCGCGTGCTACGTATCACCTGCTGGCACTTAAGGGGAAGCTTTGTTTTTC
TTTGGTAGCGTGCGATCGCGACTAGAGGTGCCGTGGTACGCCATGAGCTT
CCCCGATTAAGACAAAGTGTTCTCATTTTCATTGGGGCGTGCCTGCACTG
TGTTGTACTGTACAGGTTATTGGTCGTGAATTGAGCGGTCCTTGTTTAAG
TGTGGCTGATTCGAGATGATCCTACATCGTATAAGTACAAGTGGATGTGT
GGTTGAAGTACTTTGGGTACACATGTGCCTCGTTGGATTCATGTGCATGG
AATGCAGGTGTAGTGTGTTGAGACGGTGTGAGATCTTGCTTCCTGACGAA
AAATAATATGAAAAATAATATTTAGAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1528:9403..13879-

>mRNA_E-siliculosus-1a_F_contig1528.3054.1 ID=mRNA_E-siliculosus-1a_F_contig1528.3054.1|Name=mRNA_E-siliculosus-1a_F_contig1528.3054.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1302bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1528:9403..13879- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGAACTTTGGAAAGATGCCCGCCGGAAGGACTGCATCCAGGCTGGC
AAGGGTCGTCGGCAAGAGCGAGGCCAGCATCCAGAGCAGCGTCCGAGCCG
GCTCGATGAACGCCCTGCTGTCGACGAGGTCGGGCCTCACCGTCACCCAG
GCAGCGACCAGGCTTGCCATCGCGAAGCTCCCGGTCAGGCACATGTCTGG
ACAGATGATGAACTTTGGAAAGATGCCCGCCGGAAGGACTGCATCCAGGC
TGGCAAGGGTCGTCGGCAAGAGCGAGGCCAGCATCCAGAGCAGCGTCCGA
GCCGGCTCGATGAACGCCCTGCTGTCGACGAGGTCGGGCCTCACCGTCAC
CCAGGCAGCGACCAGGCTTGCCATCGCGAAGCTCCCGGTCAGGCACATGT
CTGGACAGGCCGACTACGCGGCCAACTACACCGCTGGCCGACTACGCGGC
CAACTACACCGCTGACCAGAAGGCCGTGGACGCCGCGACTAGGCACTGGA
GGGACACGGTGACCTCCAACACCGAGGACGCTCCCAAGAAGACCGCCGCC
ATCTACGCTGACGACGCGCTGTTCTGGGGAACGGTCTCGGAGGAGGTCCG
CAACACGCCCGCCCACGTCTACGACTACTTCACCAGAAGGCCGTGGACGC
CGCGACTAGGCACTGGAGGGACACGGTGACCTCCAACACCGAGGACGCTC
CCAAGAAGACCGCCGCCATCTACGCTGACGACGCGCTGTTCTGGGGAACG
GTCTCGGAGGAGGTCCGCAACACGCCCGCCCACGTCTACGACTACTTCGA
CTTCTTTGCCCGCATGCCCAAGCTCTCCATGGTCGCGTACGACCCGGCGC
CCCCGCGCATCCACGGGGACTTCGCCATCCACGCCGGCGCCTACACCTTC
GCCTGGGCGGGAGCGGACGGGGCCATGAGCGAGACGCGGGCGCGCTTCAC
GTTTGCGTACCGAAGGGAGAACGGCAAGTGGGTGATGATCGAGCACCACT
CGTCCGCGATGCCCAAGGCGCCCCCGGGGCTCAAGCCCGACTTCTTTGCC
CGCATGCCCAAGCTCTCCATGGTCGCGTACGACCCGGCGCCCCCGCGCAT
CCACGGGGACTTCGCCATCCACGCCGGCGCCTACACCTTCGCCTGGGCGG
GAGCGGACGGGGCCATGAGCGAGACGCGGGCGCGCTTCACGTTTGCGTAC
CGAAGGGAGAACGGCAAGTGGGTGATGATCGAGCACCACTCGTCCGCGAT
GCCCAAGGCGCCCCCGGGGCTCAAGCCCGCCCAGCACTAAGCCCAGCACT
AA
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