mRNA_E-siliculosus-1a_F_contig1525.3036.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: D8LPN0_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN0_ECTSI) HSP 1 Score: 331 bits (848), Expect = 1.080e-112 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAGLR 498
DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAGLR
Sbjct: 138 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAGLR 303
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: A0A6H5KTF5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF5_9PHAE) HSP 1 Score: 329 bits (844), Expect = 5.950e-108 Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAGLR 498
DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTS VIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAGLR
Sbjct: 450 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSTVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAGLR 615
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: A0A835YPW4_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW4_9STRA) HSP 1 Score: 195 bits (495), Expect = 8.370e-57 Identity = 94/156 (60.26%), Postives = 116/156 (74.36%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPN 468
DGRVGFIDFGIVGRIP+ VW ++RDLS G + +YR MA +LV+MGA DG VD DAFA DIE + L M+ V + + D TG V S+NF QE +T+LL+DI AENNGL+LPREFG+LIKQALYFD Y++LLAP +D LRDDR+ LP+
Sbjct: 366 DGRVGFIDFGIVGRIPKRVWGAVRDLSAGVVAGDYRAMALALVQMGATDGVVDIDAFALDIEGIFLRLARMDRDVQVAPMADPVTGRVGVAASLNFQQEDVTKLLIDIAATAENNGLRLPREFGLLIKQALYFDAYSQLLAPTVDLLRDDRIILPD 521
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: A0A0G4FU95_9ALVE (ABC1 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FU95_9ALVE) HSP 1 Score: 167 bits (423), Expect = 1.230e-45 Identity = 94/176 (53.41%), Postives = 114/176 (64.77%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADG------EVDTDAFAFDIEKVIDSLGSMEAQVDTSAV----IDEDTGNVSYGTSVN--FDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAG 492
DGR+GFIDFGIVGRI T W ++RD+S +Y MA++L MGAADG +VDT+AFA DI K+ E + D S V +D +G V+ G SV+ D E +TRLLLD+V AENNGLKLPREF +LIKQALYFDRY +LLAPELD L DDR+ L D G
Sbjct: 462 DGRIGFIDFGIVGRISRTTWEAVRDVSLAAAKEDYLGMASALQSMGAADGAHTATGKVDTEAFAEDIRKIAKQF--KELRTDVSVVQAIQVDPSSGTVTRGASVDVQLDDEQVTRLLLDLVAAAENNGLKLPREFVLLIKQALYFDRYVQLLAPELDYLNDDRMRLQEALAAKDTG 635
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: A0A7S2RT86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT86_9STRA) HSP 1 Score: 165 bits (417), Expect = 4.750e-45 Identity = 84/152 (55.26%), Postives = 109/152 (71.71%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRV 456
DGRVGFIDFGIVGRIP +W +L+D++ G ++ +A LV MGA D EVD AFA D+ +V++++ + QV V D G V+ G V D++ +TR+ LDIVGV+E NG+KLPREFG+L+KQ LYFDRYTRLLAP+LD L DDRV
Sbjct: 424 DGRVGFIDFGIVGRIPSKIWGALQDVAVGAAGEDWVQVAQGLVAMGATDQEVDIQAFAEDLRRVVEAINEINPQV---VVQDNMDGTVAAGIGV--DEQQVTRIALDIVGVSERNGVKLPREFGILVKQVLYFDRYTRLLAPDLDVLADDRV 570
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: A0A6T5M278_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5M278_HETAK) HSP 1 Score: 159 bits (401), Expect = 2.150e-43 Identity = 79/152 (51.97%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRV 456
DGRVGFIDFGIVGRIP +W+S+ L+ F+ +YR MA ++V MGAA+ EVD F D+++ LG Q+D ++ G + V FDQ +T L+L +V V+ENNGLKLPREFG+L+KQ+LYFDRY ++LAPELD LRD+R+
Sbjct: 328 DGRVGFIDFGIVGRIPPKIWNSITKLAECFVGGDYRGMAEAMVAMGAAEREVDVARFGRDLQQ----LGEQLLQLDPELMVAGGPGG--FEAQVQFDQNRVTELVLQVVAVSENNGLKLPREFGLLLKQSLYFDRYQKILAPELDVLRDERI 473
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: A0A7S0SW46_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SW46_9STRA) HSP 1 Score: 150 bits (380), Expect = 3.480e-43 Identity = 75/152 (49.34%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRV 456
DGR+GFIDFGIVG++PE VW +L L+ F+ ++Y +A++LV MGA D +VD + F+ +IE+V + + SME + + D G S ++ + T L+L +V V++ NGLKLPREFG+L+KQALYFDRY ++LAP LDPLRD RV
Sbjct: 12 DGRIGFIDFGIVGKVPEKVWKALGLLTQSFVESDYNGVASALVSMGATDSKVDINKFSKEIEQVFNKILSMEPTITMQSY---DYG-ASLDATIALNDRETTELVLQVVEVSDRNGLKLPREFGLLLKQALYFDRYQKILAPSLDPLRDIRV 159
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: A0A4D9CYJ6_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYJ6_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.720e-43 Identity = 78/162 (48.15%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRAD 486
DGRVGFIDFGIVGR+ W ++ ++ GF+ +Y+ +A L++MGA VD + A D+E + + + +++ QV A ++ T SV D++ +TRLLL+IV VA +NGLKLPR+FG+LIKQ+LYFDRYTR+LAP LDPLRD RV P A+
Sbjct: 347 DGRVGFIDFGIVGRLSPETWRAVTEVGEGFVGQDYQQIAQGLIRMGATAAAVDEEKLAADLEALFERVRTLDPQVVVVADMEAQTA----AASVAVDEDQVTRLLLEIVDVASSNGLKLPRQFGLLIKQSLYFDRYTRILAPTLDPLRDTRVNFPKTVEEAE 504
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: A0A7S1FJU8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FJU8_9STRA) HSP 1 Score: 159 bits (403), Expect = 4.150e-43 Identity = 78/154 (50.65%), Postives = 107/154 (69.48%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTL 462
DGRVGFIDFGIVGR+ E W ++ +LS +++ MA ++ MGA D EVD F DIEKV+ L +++ +V S+V G + S+ FD+E +T++LL+IV V ENNGLKLPREFG+L+KQ+LYFDRY ++LAP LD + D RVT+
Sbjct: 400 DGRVGFIDFGIVGRVGEKTWKAVNELSGAMGESDFEAMARAMCNMGATDEEVDVKKFGRDIEKVMTKLSAVQPEVTVSSV-----GEGAVEGSIGFDEEELTKVLLEIVEVTENNGLKLPREFGLLVKQSLYFDRYLKILAPGLDVMADSRVTM 548
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Match: F0YMV8_AURAN (ABC1 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMV8_AURAN) HSP 1 Score: 155 bits (392), Expect = 1.130e-42 Identity = 78/152 (51.32%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 1 DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRV 456
DGRV F+DFGIVGR+PE +W+SL+D + G + ++ L+A +L MGAA+ VD AFA D+E + SL ++ V SA G + +V+ D +T LLL +V V E NG+KLPREFG+L+KQALYFDRYTRLLAP++D + DDRV
Sbjct: 255 DGRVAFLDFGIVGRVPERIWTSLQDAAAGLASRDFELLARALTTMGAAE-RVDERAFAADLEALFKSLDEVQPDVLVSA-----DGAGAVAATVSVDDAQVTDLLLQVVNVTERNGIKLPREFGLLVKQALYFDRYTRLLAPDMDVINDDRV 400 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1525.3036.1 >prot_E-siliculosus-1a_F_contig1525.3036.1 ID=prot_E-siliculosus-1a_F_contig1525.3036.1|Name=mRNA_E-siliculosus-1a_F_contig1525.3036.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=167bp DGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGback to top mRNA from alignment at E-siliculosus-1a_F_contig1525:160..2234+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1525.3036.1 ID=mRNA_E-siliculosus-1a_F_contig1525.3036.1|Name=mRNA_E-siliculosus-1a_F_contig1525.3036.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2075bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1525:160..2234+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1525:160..2234+ >mRNA_E-siliculosus-1a_F_contig1525.3036.1 ID=mRNA_E-siliculosus-1a_F_contig1525.3036.1|Name=mRNA_E-siliculosus-1a_F_contig1525.3036.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1002bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1525:160..2234+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |