mRNA_E-siliculosus-1a_F_contig1524.3032.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: D7G620_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G620_ECTSI) HSP 1 Score: 782 bits (2020), Expect = 2.310e-278 Identity = 418/437 (95.65%), Postives = 423/437 (96.80%), Query Frame = 2
Query: 233 MSRRLALVSVFLAPYAAGTADAAGASGVTSTGPAAHYETLFKSPWNEDNNKHGLQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVGRDLSAHTPM 1543
MSRRLALVSVFLAPYAAG ADAAGASG TSTGPAAHYETLFKSPWNEDNNKHGLQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIG+TQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENA+TNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQA XXXXXXXXXXALDPRGGRLPNVPAGG S+SLGLGISYVSFRVRPGTAAGIARFYRELFGAEA+EMGGXXXXXXXXXXXX GEDVCSVTQEGDSGKG CSTATEAD+RR TAAVVRVGPVQHL FVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPV RDLSAHTPM
Sbjct: 1 MSRRLALVSVFLAPYAAGAADAAGASGATSTGPAAHYETLFKSPWNEDNNKHGLQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGSTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAITNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAAXXXXXXXXXXALDPRGGRLPNVPAGGQGSSSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAQEMGGXXXXXXXXXXXXSS--GEDVCSVTQEGDSGKGLRCSTATEADKRRGTAAVVRVGPVQHLAFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVARDLSAHTPM 435
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A538QLZ7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A538QLZ7_9BACT) HSP 1 Score: 133 bits (335), Expect = 5.410e-31 Identity = 114/372 (30.65%), Postives = 150/372 (40.32%), Query Frame = 2
Query: 392 LQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1507
+ HLEHVNV +P A Y LG D + G +W N G +Q HLP PQV+ G GLV D E+ ARL A T+ L+GTKFA++ E + + DVTCP+GN RLH+ PS+ R P + LG+ YV F VR GTAAGIARFYRE+ A A +VT G AA V VG Q L+F E D+ YDGHHI +Y+ + F P R + + + QYR ++ DP +G+ L +EHE+R ++HP Y
Sbjct: 16 IVHLEHVNVRVPDQQLATQFYIVALGGTRDPY----LMVGLDNMWCNFGHSQFHLPTAAPQVLRGVTGLVV--PDFDELPARLA--AATD--------RLKGTKFAYKVEGD-------HADVTCPWGNRIRLHR--PSA----------------------------RFPRME----------LGMPYVEFPVREGTAAGIARFYREIMAAPA--------------------------TVTTNGS------------------VAAEVTVGTSQRLIFRETSDQLA---SYDGHHIAIYISD----------------FSGPHRKMVERGIVSEESNPYQYRFVEIADPESGKTLFEIEHEVRCVTHPMY 261
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A1Q7BQ72_9PROT (Uncharacterized protein n=5 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BQ72_9PROT) HSP 1 Score: 130 bits (326), Expect = 9.380e-30 Identity = 112/383 (29.24%), Postives = 159/383 (41.51%), Query Frame = 2
Query: 392 LQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVGRDLSAHTP 1540
+ +L HVNVCI A H Y LG D + G+G +W N+G +Q HLP G+P V+ G GLV D A ++ RLT+ + L+GTKF +RE + V+ CP+GN +H AP+ + R GR+ LG+ Y++F VRPGTA GI RFYRE+ GA + SV + G++ K A V+VG Q+ F E + ++ YD HH +Y+ F + + GLV + E +YR KD++D T E+L +EHE+RS +HP Y GR L P
Sbjct: 16 IVNLGHVNVCISDQHLATHYYITGLGLTRDPF----LNTGAGNMWVNVGVSQFHLPAGQPDVLRGVTGLVV--PDRAALLDRLTQ----------ARKPLDGTKFDFRENND-------CVETVCPWGNRINVH---------APDES-----------------RFGRIV-------------LGMPYIAFDVRPGTARGIVRFYREVMGA--------------------------LASVIENGNAPK-----------------ACVQVGEKQYWYFHETDAP---EKPYDRHHAQIYIA--NFSGPYRRLKELGLVTTE--------------VNEHEYRFKDVIDLDTREVLFTVEHEVRSQTHPLY--GRPLVNRNP 272
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A2V6PNE7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6PNE7_9BACT) HSP 1 Score: 129 bits (325), Expect = 1.190e-29 Identity = 115/369 (31.17%), Postives = 142/369 (38.48%), Query Frame = 2
Query: 401 LEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1507
LEHVNV IP Y LGF D + G +W N+G Q HLP EPQVV G +GL S D ++ RL +N K L GTKF++ E + +V +T P+GN R H P + LG+ YV F V G A GIARFYRE+FGA V VT G AA V+VGP Q L+F E + EYDGHHI +Y+ + G A R LV A L + QYR KD+VDP T +L LEHE+R +HP Y
Sbjct: 18 LEHVNVRIPDQQIGTLFYVIGLGFTRDPY----LNVGLQNMWINLGQQQFHLPTAEPQVVRGVVGLCVPSLDA--LVQRL----------DNVKERLAGTKFSYAVEDK-------HVSITTPWGNKMRAHGPSPEFGDMT----------------------------------------LGMPYVEFPVPQGHATGIARFYREVFGA--------------------------VAGVTSNGG------------------VAAHVKVGPGQELIFAETTEPLA---EYDGHHIAIYVSDFG-------APHRWLV---------DAKLLTEESNRYQYRFKDIVDPDTKRVLFTLEHEVRCATHPMY 260
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A534NHJ4_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534NHJ4_9DELT) HSP 1 Score: 128 bits (322), Expect = 3.120e-29 Identity = 107/370 (28.92%), Postives = 145/370 (39.19%), Query Frame = 2
Query: 401 LEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLP-EGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1507
LEHVNV IP A Y LGFA D + G G +WAN+G Q HLP PQ++PG IGLV DL E + E L+GT F+W E+ + VTCP+GN +R H P S +A LG+ YV F+ RPGTA+GIARFY+E+ A + E+ V + V +G Q L+F E +E + YDGHHI +Y+ F R + +R + + ++ Q+R KDL+DP G + LEHE+RS+ H Y
Sbjct: 18 LEHVNVEIPDQAKATLFYVVGLGFARDPY----LNVGLGNMWANVGEQQFHLPTRARPQIIPGLIGLVVPDLDLLESRLKAVEEP------------LKGTHFSW-------SAESNSLAVTCPWGNRFRCHCPTPRFSDMA----------------------------------------LGMPYVEFQTRPGTASGIARFYQEVMQAPSSMFS------------------ENGMPVVR-------------------------VEIGRNQWLLFRETSEEI---RPYDGHHIAIYVA--NFSRPYAFLQRHNRIMED--------------VQNHQFRFKDLIDPENGREVFRLEHEVRSLRHQMY 262
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A2V6ZED1_9BACT (Uncharacterized protein n=4 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V6ZED1_9BACT) HSP 1 Score: 125 bits (315), Expect = 2.650e-28 Identity = 110/370 (29.73%), Postives = 145/370 (39.19%), Query Frame = 2
Query: 401 LEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEE-EDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1507
LEHVNV IP A + Y LG D + G+ +W N G Q H+P G+P+V+ G +G V DL + RL + L GTKFA E + Y+ VTCP+GN R H P + LGI YV F VRPGTA GIA+FY+ GA A +V+ G+ +A V+VG QHLVF E E EA+ YDGHHI +Y+ F + + RGL+ + QYR KD+VDP T +L +EHE+RS +HP +
Sbjct: 20 LEHVNVKIPDQVIATNFYVTALGLTRDPY----MNTGTENMWINAGQQQFHMPTGKPEVLRGIVGFVI--PDLEGLKMRL----------GGAREKLAGTKFACAAEDK-------YISVTCPWGNRLRFHAPGPEFGDMT----------------------------------------LGIPYVEFAVRPGTAVGIAKFYQAAMGAPA--------------------------TVSFNGN------------------VSARVQVGAKQHLVFRETTEPEAM----YDGHHIAIYVV--NFSGPHKWLKERGLI--------------SEESNPVQYRFKDIVDPETSRVLFTIEHEVRSATHPMF 262
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A5C5TJY3_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TJY3_9HYPH) HSP 1 Score: 124 bits (312), Expect = 7.250e-28 Identity = 107/372 (28.76%), Postives = 153/372 (41.13%), Query Frame = 2
Query: 392 LQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1507
+ HLEHVNV +P A Y LG D ++ +W N+G +Q HLP G+PQ++ G +GLV D A ++ RL ++ALEG++FA E + ++D CP+GN R+H+ D R GR + LG+ Y++F V G+AAGI+RFYR++F A + + GS C+ T VG Q L F E +D YDGHHI VYL + F + RGLV + + QYR D+ DP TG++L +EHE+RS++HP Y
Sbjct: 17 IVHLEHVNVSVPDQRWATLFYVTGLGLTRDPYMMTSVDN----MWVNVGRSQFHLPTGKPQILRGHVGLVI--PDRAWLLKRLA----------GVRDALEGSRFAVTEHAD-------HIDAVCPWGNRIRVHEP---------------------------DARFGR-------------VALGVGYITFDVPVGSAAGISRFYRDIFAAPSRVI------------------------------DADGSPCAEVT-------------VGRDQQLRFRETDD---APPAYDGHHIQVYLAD--FSGPYRRLLERGLV--------------SQESSQWQYRFLDVADPDTGKVLFRVEHEVRSMTHPLY 263
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A2V8NBY0_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8NBY0_9BACT) HSP 1 Score: 119 bits (298), Expect = 4.530e-26 Identity = 112/387 (28.94%), Postives = 154/387 (39.79%), Query Frame = 2
Query: 380 NKHGLQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVGRDLSAHTP 1540
N + HLEHVNV P A Y LG D G +W NIG Q+HLP G+PQ V GTIGLV DL + RL+E + L T+F + + + +V V CP+GN +R H P++ G T L L +YV F VRPGTAA IARFYRE+ GA A +G G TA+ + VG Q++ F E + + YDGHHI +Y+ + F +P R + + L + + ++R +D+VD + E+L +EHE+RS+ HP Y GR L P
Sbjct: 11 NVSNIVHLEHVNVTQPDQRLATLFYVSGLGLTRDPYMM----TGVDNMWINIGRNQMHLPTGDPQRVRGTIGLVV--PDLRALTHRLSEVL----------SPLSHTQFGFVDRE-------SFVAVKCPWGNRFRCHG-----------------------------------PSLEFG---CTELAL--AYVEFNVRPGTAAQIARFYREIMGAAAN--------------------------------AGMRDGAITAS-----------ISVGRDQYVFFRETAERI---EPYDGHHIQIYIAD----------------FSSPYRRLLERNGLTRDTDAHEWRFQDIVDVESNEVLFTIEHEVRSLKHPLY--GRPLVNRNP 270
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A2E6GQI4_9PROT (VOC domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GQI4_9PROT) HSP 1 Score: 118 bits (296), Expect = 1.040e-25 Identity = 106/369 (28.73%), Postives = 141/369 (38.21%), Query Frame = 2
Query: 401 LEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGTTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSY 1507
LEH+N+ +P A Y LG D + G G +W NIG Q HLP QV+ GT+GLV DL ++ RL K L GTKF ++ K V+VTCP+GN R H A G ++ + LG+SY F V G A GIA+FYRE+ GA + MG TAA V G Q L+F E + E+DGHHI +YL F P +N + + + + QYR D+VDP G+LL L+HE+RS++HP Y
Sbjct: 21 LEHLNLLVPDQRLAMIFYIGGLGLTRDPY----MQTGPGNMWINIGDNQFHLPTRGTQVMRGTVGLVL--PDLKNLVERLKSV----------KKDLTGTKFGFKATKG-----ARCVEVTCPWGNRIRCH----------------------------------------AAGKSTAPIVLGMSYAQFDVPVGVAEGIAKFYREIMGANVK-MGRW------------------------------------------ESATAARVSAGYRQELIFSETRKKIA---EFDGHHIQIYLAN----------------FSGPYKNLLERSLITQESNQHQYRFIDIVDPKDGKLLFNLDHEVRSMTHPMY 266
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Match: A0A7S0LFS2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LFS2_9EUKA) HSP 1 Score: 119 bits (298), Expect = 1.620e-25 Identity = 112/381 (29.40%), Postives = 150/381 (39.37%), Query Frame = 2
Query: 401 LEHVNVCIPSH--DPAKHLYYDILGFAPD------ARRAHNIGKGSGTI--WANIGTTQIHLPEGEP----QVVPGTIGLVYGSSDLAEVIARLTENAVTNGNENNRKNALEGTKFAWREEKEEGGEETGYVDVTCPYGNVYRLHKRKPSSSTIAPEATQAXXXXXXXXXXXALDPRGGRLPNVPAGGNASTSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAEEMGGXXXXXXXXXXXXXXXXGEDVCSVTQEGDSGKGSGCSTATEADRRRRTAAVVRVGPVQHLVFVEEEDEALLQQEYDGHHICVYLPEEGFRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHP 1501
LEHVN+ S ++ ++G A D RR G GS T W NIG Q+H+P GEP QVV G IGL YG ++ + RL NA +E T FA G V CP+GN R + P P+ +G + GLG+ +V V P TAAGI RFY E+F S A +R R +V +G Q L FVE+ YDG H+ +Y+ F R++ L++ NPR DTLE AL ++R+ +VDPA+GE L LEHE+RS++HP
Sbjct: 49 LEHVNLNAGSSWTGVLDTFWFGVVGGADDPRSQTVCRRTQESG-GSMTDMRWVNIGLQQLHMPLGEPEHSVQVVAGEIGLAYGKHEMHRLRERLA-NA-----------EIEHTAFA-----------DGSVSFRCPHGNRLRAEPWIGPLTWFGPAEVIT--------------------PDAASGLPGGLTAGLGLRFVRVNVPPATAAGICRFYSEIFE-------------------------------------------SAALLTERHGRRCCIVPIGHHQSLEFVEQTARNEPLPPYDGTHVAIYVNH--FERAYRRLASFNLLWNNPRFPHLTYDTLEDALHHHEFRLLHVVDPASGERLFTLEHEVRSLAHP 340 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1524.3032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1524.3032.1 >prot_E-siliculosus-1a_F_contig1524.3032.1 ID=prot_E-siliculosus-1a_F_contig1524.3032.1|Name=mRNA_E-siliculosus-1a_F_contig1524.3032.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=438bp MSRRLALVSVFLAPYAAGTADAAGASGVTSTGPAAHYETLFKSPWNEDNNback to top mRNA from alignment at E-siliculosus-1a_F_contig1524:13209..19018- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1524.3032.1 ID=mRNA_E-siliculosus-1a_F_contig1524.3032.1|Name=mRNA_E-siliculosus-1a_F_contig1524.3032.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5810bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1524:13209..19018- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1524:13209..19018- >mRNA_E-siliculosus-1a_F_contig1524.3032.1 ID=mRNA_E-siliculosus-1a_F_contig1524.3032.1|Name=mRNA_E-siliculosus-1a_F_contig1524.3032.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2628bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1524:13209..19018- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |