mRNA_E-siliculosus-1a_F_contig15208.3021.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15208.3021.1
Unique NamemRNA_E-siliculosus-1a_F_contig15208.3021.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: A0A0F9VZC9_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9VZC9_9ZZZZ)

HSP 1 Score: 608 bits (1568), Expect = 1.770e-215
Identity = 300/332 (90.36%), Postives = 316/332 (95.18%), Query Frame = 1
Query:    1 FSIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            FSIALITLA+FAFML  A+LFKRTFR+LSR+MA FVP RVSYVLGTI AVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSG EIG YLGEE PDPVRVYVGLNAAETP+ERAELALAELIRVGGF RSAL+IATPTGRGW+DP AQDTVEYLHRGDIATIAAQYSYLPSHLSL+AEAEYGVENARALFTTVYDYWTALP+D+RPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRS+TWR+VT+DRDAGSPAWLP FR G+VVRFMNQ+QGL  P + WGDFRIAY
Sbjct:  124 FSIALITLAIFAFMLLIARLFKRTFRLLSRKMAHFVPRRVSYVLGTIAAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGAEIGNYLGEEAPDPVRVYVGLNAAETPTERAELALAELIRVGGFARSALIIATPTGRGWIDPAAQDTVEYLHRGDIATIAAQYSYLPSHLSLVAEAEYGVENARALFTTVYDYWTALPSDQRPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSETWRSVTSDRDAGSPAWLPTFRGGAVVRFMNQYQGLNAPEAHWGDFRIAY 455          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: A0A511USQ9_9GAMM (Membrane protein n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511USQ9_9GAMM)

HSP 1 Score: 574 bits (1479), Expect = 6.140e-202
Identity = 281/332 (84.64%), Postives = 303/332 (91.27%), Query Frame = 1
Query:    1 FSIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            FSIALI L +F FMLF A LFKRTFR+LSR+MA F+P RV+YVLGTI A+ALFWSV+EGVIFSLALQAADRSYQQVDELIQDD+SPPND +KPGSAES+ISWEALGSRGRRFVT GPSGEEIG + GE+ PDPVRVYVGL+AAETP ERA+LAL ELIRVGGFERS LV+ATPTGRGWV P AQDTVEYL RGDIATIAAQYSYLPSHLSLIAE EYGVENARALFTTVYDYWT+LP+DERPRLYLFGLSLGALNSDLSFD YDIIEDPFHGALWSGPPFRS+TWR VT DRD GSPAWLP FRDG+VVRFMNQ+Q L  P +QWGDFRIA+
Sbjct:  123 FSIALIALVLFVFMLFIAYLFKRTFRLLSRKMAHFLPRRVAYVLGTIAAIALFWSVLEGVIFSLALQAADRSYQQVDELIQDDISPPNDPLKPGSAESMISWEALGSRGRRFVTRGPSGEEIGQFTGEKAPDPVRVYVGLSAAETPQERAQLALEELIRVGGFERSVLVLATPTGRGWVPPAAQDTVEYLQRGDIATIAAQYSYLPSHLSLIAEGEYGVENARALFTTVYDYWTSLPSDERPRLYLFGLSLGALNSDLSFDFYDIIEDPFHGALWSGPPFRSETWRAVTQDRDKGSPAWLPTFRDGAVVRFMNQYQELSAPETQWGDFRIAF 454          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: A0A651DE78_HALSX (Uncharacterized protein n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651DE78_HALSX)

HSP 1 Score: 572 bits (1475), Expect = 2.400e-201
Identity = 281/332 (84.64%), Postives = 304/332 (91.57%), Query Frame = 1
Query:    1 FSIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            FSI LI LA+F  +LFFAKLFKRTFR+LSRRMA F+P RVSYVLGT+ AVALFWSVIEGVI S ALQAADRSYQQVDELIQDDLSPP+D M+PGSAESLISWEALGSRGRRFVT GPSGE+IG +LGEE  DP+RVYVGLNAAE+P+ERAELALAELIRVGGFERS LV+ATPTGRGWVDP AQDTVEYL+RGDIATIAAQYSYLPSHLSL+AE EYGVENARALFTTVYDYW  LP+DERPRLYLFGLSLGALNSDLSFDLYDII+DPFHGALWSGPP+RS+TWRT T  RD G+PAWLP FR GSVVRFMNQ QGL +P ++WGDFRIAY
Sbjct:  124 FSIGLIALAIFISLLFFAKLFKRTFRLLSRRMAHFLPRRVSYVLGTLAAVALFWSVIEGVIVSFALQAADRSYQQVDELIQDDLSPPSDPMRPGSAESLISWEALGSRGRRFVTRGPSGEQIGNFLGEEALDPIRVYVGLNAAESPAERAELALAELIRVGGFERSILVLATPTGRGWVDPAAQDTVEYLYRGDIATIAAQYSYLPSHLSLLAEGEYGVENARALFTTVYDYWRTLPSDERPRLYLFGLSLGALNSDLSFDLYDIIDDPFHGALWSGPPYRSETWRTTTTGRDPGTPAWLPTFRGGSVVRFMNQDQGLDVPAAEWGDFRIAY 455          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: UPI00201F7643 (alpha/beta-hydrolase family protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201F7643)

HSP 1 Score: 561 bits (1446), Expect = 5.320e-197
Identity = 271/332 (81.63%), Postives = 302/332 (90.96%), Query Frame = 1
Query:    1 FSIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            FS+ALI + VFAF+L    LF+RTFR+LSR+++  +P R +YVLGTITAVALFW VIEGVIF+ ALQ ADRSYQQVDEL+QDDL PP D MKPGSAESLISWEALGSRGRRFVT GPSG +I  +LGE+VPDP+RVYVGLNAAE+P+ERAELALAEL+RVGGFERS L++ATPTGRGWVDPG+QDTVEYLHRGDIAT+ AQYSYLPSHLSLI+EAEYGVENARALFTTVYDYW++LP++ERPRLYLFGLSLGALNSDLSFDLYDII+DPFHGALWSGPPFRSDTWRTVT DRD GSPAWLP FR+GSVVRFMNQ QGLQ    +WGDFRIAY
Sbjct:  124 FSVALIAVGVFAFLLLMVWLFRRTFRLLSRKLSHILPRRTAYVLGTITAVALFWLVIEGVIFTYALQIADRSYQQVDELMQDDLIPPTDPMKPGSAESLISWEALGSRGRRFVTQGPSGNQISAFLGEQVPDPIRVYVGLNAAESPAERAELALAELVRVGGFERSVLILATPTGRGWVDPGSQDTVEYLHRGDIATVTAQYSYLPSHLSLISEAEYGVENARALFTTVYDYWSSLPSNERPRLYLFGLSLGALNSDLSFDLYDIIDDPFHGALWSGPPFRSDTWRTVTADRDPGSPAWLPTFREGSVVRFMNQFQGLQAAPGEWGDFRIAY 455          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: A0A1H9R7V3_9GAMM (Uncharacterized membrane protein n=2 Tax=Halomonas subterranea TaxID=416874 RepID=A0A1H9R7V3_9GAMM)

HSP 1 Score: 551 bits (1420), Expect = 5.810e-193
Identity = 270/332 (81.33%), Postives = 297/332 (89.46%), Query Frame = 1
Query:    1 FSIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            FSIALI LAVF+F +  A LFK TFR+LSR+MARF+  RVS +LGT+ A+ALFW VIEGVIFSLAL+ ADRSYQQVDELIQDDLSPP+D M PGSAESL+SWEALGSRGRRFVT GP+GEEIG + GEE PDP+RVY+GLNAAETP  RA LAL EL RVGGFERS L+IATPTGRGW+DP AQDTVEYLHRGDIATIAAQYSYLPSHLSLIAE EYGVENARALF+TVY+YW +LPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPP+RS+TWR+VT DRD G+PAWLP FR GSVVRFMNQ+QGL    S+WGDFRIA+
Sbjct:  124 FSIALIALAVFSFAMLIAHLFKLTFRLLSRKMARFLTRRVSSLLGTMAAIALFWLVIEGVIFSLALKVADRSYQQVDELIQDDLSPPSDPMTPGSAESLVSWEALGSRGRRFVTQGPAGEEIGDFTGEEAPDPLRVYIGLNAAETPQARARLALEELKRVGGFERSVLLIATPTGRGWIDPAAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEGEYGVENARALFSTVYEYWASLPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPYRSETWRSVTADRDIGTPAWLPTFRGGSVVRFMNQYQGLDAAESEWGDFRIAF 455          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: A0A1U9R6J6_9GAMM (Uncharacterized protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9R6J6_9GAMM)

HSP 1 Score: 535 bits (1377), Expect = 1.960e-186
Identity = 261/331 (78.85%), Postives = 291/331 (87.92%), Query Frame = 1
Query:    4 SIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            S+ALI   VF F+L  A LFKRTFR+LS ++A  +P R + VLGTI A+ALFW +IEGVIFS AL+ ADRSYQQVDEL+QD+LSPP +  KPGSAESLISWEALGSRGRRFVT GP G +IG +LGE+  DP+RVYVGLNAAET ++RAELAL ELIRVGGFERS LVIATPTGRGWVDPGAQDTVEYLHRGDIAT+AAQYSYLPSHLSL++EAEYGVENARALF TVYDYW++LP+D+RP+LYLFGLSLGALNSDLSFDLYDII+DPFHGALWSGPPFRSDTWR+VT  RD GSPAWLP FR GSVVRFMNQ QGLQ    +WGDFRIAY
Sbjct:  125 SVALIATGVFIFLLLIALLFKRTFRLLSHKLAHILPRRTAQVLGTIAAIALFWLIIEGVIFSYALKIADRSYQQVDELMQDELSPPLEPNKPGSAESLISWEALGSRGRRFVTQGPDGNQIGEFLGEQALDPIRVYVGLNAAETAAQRAELALEELIRVGGFERSVLVIATPTGRGWVDPGAQDTVEYLHRGDIATVAAQYSYLPSHLSLVSEAEYGVENARALFATVYDYWSSLPSDDRPKLYLFGLSLGALNSDLSFDLYDIIDDPFHGALWSGPPFRSDTWRSVTAGRDPGSPAWLPTFRGGSVVRFMNQTQGLQAAPGEWGDFRIAY 455          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: H0IZS7_9GAMM (Uncharacterized protein n=1 Tax=Halomonas sp. GFAJ-1 TaxID=1118153 RepID=H0IZS7_9GAMM)

HSP 1 Score: 531 bits (1369), Expect = 3.210e-185
Identity = 262/331 (79.15%), Postives = 289/331 (87.31%), Query Frame = 1
Query:    4 SIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            S+ALI   VF F+L  A LFKRTFR+LS ++A  +P R + V+G I AVALFWSVIEGVIFS AL+ ADRSYQQVDEL+QD+LSPP    KPGSAESLISWEALGSRGRRFVT GP G +I  +LGE   DPVRVYVGLNAA+T +ERAELAL ELIR+GGFERS L+IATPTGRGW+DP AQDTVEYLHRGDIATIAAQYSYLPSHL+LI+EAEYGVENARALFTTVYDYWT+LP+DERP+LYL GLSLGALNSDLSFDLYDII+DPFHGALWSGPPFRSDTWR+VT DRD GSPAWLP FR GSVVRFMNQ QGLQ   ++WGDFRIAY
Sbjct:  125 SVALIAATVFIFLLLIALLFKRTFRLLSHKLAHILPRRTAQVIGIIAAVALFWSVIEGVIFSYALKVADRSYQQVDELMQDELSPPQAPNKPGSAESLISWEALGSRGRRFVTQGPDGGQISEFLGEAALDPVRVYVGLNAADTAAERAELALEELIRIGGFERSVLIIATPTGRGWIDPAAQDTVEYLHRGDIATIAAQYSYLPSHLALISEAEYGVENARALFTTVYDYWTSLPSDERPKLYLTGLSLGALNSDLSFDLYDIIDDPFHGALWSGPPFRSDTWRSVTADRDPGSPAWLPTFRGGSVVRFMNQTQGLQTAPAEWGDFRIAY 455          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: F7SLJ0_9GAMM (Uncharacterized protein n=3 Tax=unclassified Halomonas TaxID=2609666 RepID=F7SLJ0_9GAMM)

HSP 1 Score: 526 bits (1355), Expect = 1.650e-183
Identity = 253/332 (76.20%), Postives = 289/332 (87.05%), Query Frame = 1
Query:    1 FSIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            FSIALI L VF F+     LFKRTF++LS ++A  +P R +YVLGTI +VALFW VIEGV+F+ AL+ ADRSYQ+VDELIQDDL PP+D M PGSA+SLISWEALGSRGRRFVT GP+G EIG ++GE+  DP+RVYVGLNAA+TP+ RA+LAL ELIRVGGFERS LV+ATPTGRGW+DP +QD VEYLHRGDIAT+AAQYSYLPSHLSLI+EAEYGVENARALFTT+YDYW+++P DERP+LYLFGLSLGALNSDLSFD YDII DPFHGALWSGPPFRSDTWR+VT +RD GSPAWLP FR+G VVRFMNQ QGL     +WGDFRIAY
Sbjct:  102 FSIALIALGVFVFLRILGLLFKRTFKLLSLKLAHILPRRTAYVLGTIASVALFWMVIEGVVFTYALKVADRSYQEVDELIQDDLDPPDDPMIPGSADSLISWEALGSRGRRFVTNGPNGAEIGEFVGEQSLDPIRVYVGLNAADTPTGRAQLALEELIRVGGFERSMLVLATPTGRGWIDPSSQDPVEYLHRGDIATVAAQYSYLPSHLSLISEAEYGVENARALFTTIYDYWSSMPQDERPKLYLFGLSLGALNSDLSFDFYDIINDPFHGALWSGPPFRSDTWRSVTANRDPGSPAWLPTFRNGDVVRFMNQSQGLDEATGEWGDFRIAY 433          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: A0A3S1E526_9GAMM (Uncharacterized protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A3S1E526_9GAMM)

HSP 1 Score: 527 bits (1357), Expect = 2.120e-183
Identity = 260/332 (78.31%), Postives = 283/332 (85.24%), Query Frame = 1
Query:    1 FSIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            FSIALITL VFAF++  A LF+RTFR                  GT+ A+ALFW VIEG+IFS AL+ ADRSYQQVDELIQ DLSPP D+ KPGSAESLISWEALGSRGRRFVT GP G  IG +LGEE  DP+RVYVGLNAAETP ERAELALAELIRVGGFERS L++ATPTGRGWVDPG+QDTVEYLHRGDIAT+ AQYSYLPSHLSLIAEAEYGVENARALFT VYDYW++LPN+ERPRLYLFGLSLGALNSDLSFDLYDII+DPF+G LWSGPPFRSDTW++VT+DRD GSPAWLP FR GSVVRFMNQ QGLQ    +WGDFRIAY
Sbjct:  124 FSIALITLGVFAFLMLIALLFRRTFRXXXXXXXXXXXXXXXXXXGTVAAIALFWLVIEGIIFSYALKVADRSYQQVDELIQSDLSPPEDSTKPGSAESLISWEALGSRGRRFVTEGPDGAHIGDFLGEESVDPIRVYVGLNAAETPGERAELALAELIRVGGFERSVLILATPTGRGWVDPGSQDTVEYLHRGDIATVTAQYSYLPSHLSLIAEAEYGVENARALFTAVYDYWSSLPNNERPRLYLFGLSLGALNSDLSFDLYDIIDDPFNGVLWSGPPFRSDTWKSVTSDRDPGSPAWLPTFRGGSVVRFMNQTQGLQAAPGEWGDFRIAY 455          
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Match: A0A060B8D2_9GAMM (Membrane protein n=7 Tax=Halomonas TaxID=2745 RepID=A0A060B8D2_9GAMM)

HSP 1 Score: 524 bits (1349), Expect = 2.840e-182
Identity = 248/331 (74.92%), Postives = 289/331 (87.31%), Query Frame = 1
Query:    4 SIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAVALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLISWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERAELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAAQYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLSLGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWLPIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY 996
            SIALI L +FAF+     LFKRTF++LS ++A  +P R +YVLGT+ + ALFW VIEGV+F+ AL+ ADRSYQ++DE+ QDDL PP+D MKPGSA+SLISWEALGSRGRRFVT GP+G EI  +LGE+  +PVRVYVGLNAA+TP ERA+LAL ELIRVGGFERS LV+ATPTGRGW+DPG+QD VEYLHRGDIAT+AAQYSYLPSHLSLI+EAEYGVENARALFTT+Y+YW+A+P D+RP+LYLFGLSLGALNSDLSFDLYDII DPFHGALW+GPPFRSDTWR VT DRD GSPAWLP F +G+VVRFMNQ+QGL     +WG+FRIAY
Sbjct:  125 SIALIALGIFAFLSIIGLLFKRTFKLLSHKLAHILPRRTAYVLGTVASFALFWMVIEGVLFTYALKVADRSYQEMDEIFQDDLDPPDDPMKPGSADSLISWEALGSRGRRFVTNGPTGAEISEFLGEQALEPVRVYVGLNAADTPIERAQLALEELIRVGGFERSTLVLATPTGRGWIDPGSQDPVEYLHRGDIATVAAQYSYLPSHLSLISEAEYGVENARALFTTIYEYWSAMPRDQRPKLYLFGLSLGALNSDLSFDLYDIINDPFHGALWAGPPFRSDTWRNVTADRDPGSPAWLPTFHNGNVVRFMNQYQGLDEATGKWGNFRIAY 455          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15208.3021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F9VZC9_9ZZZZ1.770e-21590.36Uncharacterized protein n=1 Tax=marine sediment me... [more]
A0A511USQ9_9GAMM6.140e-20284.64Membrane protein n=1 Tax=Halovibrio variabilis Tax... [more]
A0A651DE78_HALSX2.400e-20184.64Uncharacterized protein n=1 Tax=Halomonas sp. TaxI... [more]
UPI00201F76435.320e-19781.63alpha/beta-hydrolase family protein n=1 Tax=Halomo... [more]
A0A1H9R7V3_9GAMM5.810e-19381.33Uncharacterized membrane protein n=2 Tax=Halomonas... [more]
A0A1U9R6J6_9GAMM1.960e-18678.85Uncharacterized protein n=2 Tax=Halomonas TaxID=27... [more]
H0IZS7_9GAMM3.210e-18579.15Uncharacterized protein n=1 Tax=Halomonas sp. GFAJ... [more]
F7SLJ0_9GAMM1.650e-18376.20Uncharacterized protein n=3 Tax=unclassified Halom... [more]
A0A3S1E526_9GAMM2.120e-18378.31Uncharacterized protein n=3 Tax=Halomonas TaxID=27... [more]
A0A060B8D2_9GAMM2.840e-18274.92Membrane protein n=7 Tax=Halomonas TaxID=2745 RepI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15208contigE-siliculosus-1a_F_contig15208:3..998 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size996
Model size996
Exons1
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelGammaproteobacteria
COG Functional cat.S
EggNOG OGs1MXSU@1224,1RYFH@1236,COG4425@1,COG4425@2
EggNOG free text desc.Alpha/beta-hydrolase family N-terminus
Seed eggNOG ortholog1118153.MOY_04369
Seed ortholog evalue9.3e-149
Seed ortholog score533.1
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928031.6746385-CDS-E-siliculosus-1a_F_contig15208:2..9981622928031.6746385-CDS-E-siliculosus-1a_F_contig15208:2..998Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15208 3..998 +
1696318780.2811499-CDS-E-siliculosus-1a_F_contig15208:2..9981696318780.2811499-CDS-E-siliculosus-1a_F_contig15208:2..998Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15208 3..998 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15208.3021.1prot_E-siliculosus-1a_F_contig15208.3021.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15208 3..998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15208.3021.1

>prot_E-siliculosus-1a_F_contig15208.3021.1 ID=prot_E-siliculosus-1a_F_contig15208.3021.1|Name=mRNA_E-siliculosus-1a_F_contig15208.3021.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=332bp
FSIALITLAVFAFMLFFAKLFKRTFRVLSRRMARFVPHRVSYVLGTITAV
ALFWSVIEGVIFSLALQAADRSYQQVDELIQDDLSPPNDAMKPGSAESLI
SWEALGSRGRRFVTTGPSGEEIGTYLGEEVPDPVRVYVGLNAAETPSERA
ELALAELIRVGGFERSALVIATPTGRGWVDPGAQDTVEYLHRGDIATIAA
QYSYLPSHLSLIAEAEYGVENARALFTTVYDYWTALPNDERPRLYLFGLS
LGALNSDLSFDLYDIIEDPFHGALWSGPPFRSDTWRTVTNDRDAGSPAWL
PIFRDGSVVRFMNQHQGLQIPNSQWGDFRIAY
back to top

mRNA from alignment at E-siliculosus-1a_F_contig15208:3..998+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15208.3021.1 ID=mRNA_E-siliculosus-1a_F_contig15208.3021.1|Name=mRNA_E-siliculosus-1a_F_contig15208.3021.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=996bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15208:3..998+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTTTCTATCGCGCTAATTACACTGGCAGTTTTTGCCTTTATGCTGTTTTT TGCCAAGCTGTTTAAACGAACTTTTCGAGTGCTATCGCGCCGCATGGCGC GCTTTGTTCCTCACCGCGTTTCCTACGTACTCGGTACTATTACTGCCGTT GCGCTTTTTTGGTCAGTGATAGAAGGGGTGATTTTTTCGCTGGCCCTACA AGCAGCCGACCGCTCTTACCAACAAGTGGATGAGCTGATACAGGATGACC TTTCGCCACCTAATGATGCGATGAAGCCCGGCAGTGCTGAATCGCTGATT AGCTGGGAGGCACTAGGCAGCCGAGGCCGTCGCTTTGTTACCACGGGGCC AAGCGGGGAAGAAATAGGTACCTATCTCGGTGAAGAAGTACCTGACCCGG TACGTGTTTATGTAGGGTTAAATGCCGCCGAAACACCCTCTGAGCGTGCC GAGCTTGCATTGGCGGAACTCATACGTGTAGGCGGCTTCGAGCGCTCAGC ATTGGTAATCGCCACGCCCACCGGGCGCGGCTGGGTCGATCCCGGCGCGC AAGATACGGTGGAGTATCTACACCGGGGCGATATTGCCACTATTGCCGCC CAATACTCCTACTTACCTAGCCATCTTTCACTGATTGCCGAGGCTGAATA TGGCGTCGAAAATGCCCGTGCCCTATTCACCACCGTTTACGATTACTGGA CAGCGCTACCTAACGACGAACGCCCTAGGCTATATTTATTCGGATTAAGC CTTGGCGCGTTGAATTCAGATCTCTCGTTTGATCTTTATGACATTATCGA AGACCCGTTTCACGGTGCGCTGTGGAGCGGCCCACCCTTTCGTAGTGACA CATGGCGTACCGTTACCAATGATCGAGATGCTGGCTCGCCAGCATGGCTA CCCATTTTCCGGGATGGCTCTGTAGTGCGCTTTATGAATCAACACCAAGG ATTGCAAATTCCTAACAGCCAATGGGGCGATTTTCGAATTGCCTAT
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15208:3..998+

>mRNA_E-siliculosus-1a_F_contig15208.3021.1 ID=mRNA_E-siliculosus-1a_F_contig15208.3021.1|Name=mRNA_E-siliculosus-1a_F_contig15208.3021.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1992bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15208:3..998+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTTTCTATCGCGCTAATTACACTGGCAGTTTTTGCCTTTATGCTGTTTTT
TGCCAAGCTGTTTAAACGAACTTTTCGAGTGCTATCGCGCCGCATGGCGC
GCTTTGTTCCTCACCGCGTTTCCTACGTACTCGGTACTATTACTGCCGTT
GCGCTTTTTTGGTCAGTGATAGAAGGGGTGATTTTTTCGCTGGCCCTACA
AGCAGCCGACCGCTCTTACCAACAAGTGGATGAGCTGATACAGGATGACC
TTTCGCCACCTAATGATGCGATGAAGCCCGGCAGTGCTGAATCGCTGATT
AGCTGGGAGGCACTAGGCAGCCGAGGCCGTCGCTTTGTTACCACGGGGCC
AAGCGGGGAAGAAATAGGTACCTATCTCGGTGAAGAAGTACCTGACCCGG
TACGTGTTTATGTAGGGTTAAATGCCGCCGAAACACCCTCTGAGCGTGCC
GAGCTTGCATTGGCGGAACTCATACGTGTAGGCGGCTTCGAGCGCTCAGC
ATTGGTAATCGCCACGCCCACCGGGCGCGGCTGGGTCGATCCCGGCGCGC
AAGATACGGTGGAGTATCTACACCGGGGCGATATTGCCACTATTGCCGCC
CAATACTCCTACTTACCTAGCCATCTTTCACTGATTGCCGAGGCTGAATA
TGGCGTCGAAAATGCCCGTGCCCTATTCACCACCGTTTACGATTACTGGA
CAGCGCTACCTAACGACGAACGCCCTAGGCTATATTTATTCGGATTAAGC
CTTGGCGCGTTGAATTCAGATCTCTCGTTTGATCTTTATGACATTATCGA
AGACCCGTTTCACGGTGCGCTGTGGAGCGGCCCACCCTTTCGTAGTGACA
CATGGCGTACCGTTACCAATGATCGAGATGCTGGCTCGCCAGCATGGCTA
CCCATTTTCCGGGATGGCTCTGTAGTGCGCTTTATGAATCAACACCAAGG
ATTGCAAATTCCTAACAGCCAATGGGGCGATTTTCGAATTGCCTATTTTT
CTATCGCGCTAATTACACTGGCAGTTTTTGCCTTTATGCTGTTTTTTGCC
AAGCTGTTTAAACGAACTTTTCGAGTGCTATCGCGCCGCATGGCGCGCTT
TGTTCCTCACCGCGTTTCCTACGTACTCGGTACTATTACTGCCGTTGCGC
TTTTTTGGTCAGTGATAGAAGGGGTGATTTTTTCGCTGGCCCTACAAGCA
GCCGACCGCTCTTACCAACAAGTGGATGAGCTGATACAGGATGACCTTTC
GCCACCTAATGATGCGATGAAGCCCGGCAGTGCTGAATCGCTGATTAGCT
GGGAGGCACTAGGCAGCCGAGGCCGTCGCTTTGTTACCACGGGGCCAAGC
GGGGAAGAAATAGGTACCTATCTCGGTGAAGAAGTACCTGACCCGGTACG
TGTTTATGTAGGGTTAAATGCCGCCGAAACACCCTCTGAGCGTGCCGAGC
TTGCATTGGCGGAACTCATACGTGTAGGCGGCTTCGAGCGCTCAGCATTG
GTAATCGCCACGCCCACCGGGCGCGGCTGGGTCGATCCCGGCGCGCAAGA
TACGGTGGAGTATCTACACCGGGGCGATATTGCCACTATTGCCGCCCAAT
ACTCCTACTTACCTAGCCATCTTTCACTGATTGCCGAGGCTGAATATGGC
GTCGAAAATGCCCGTGCCCTATTCACCACCGTTTACGATTACTGGACAGC
GCTACCTAACGACGAACGCCCTAGGCTATATTTATTCGGATTAAGCCTTG
GCGCGTTGAATTCAGATCTCTCGTTTGATCTTTATGACATTATCGAAGAC
CCGTTTCACGGTGCGCTGTGGAGCGGCCCACCCTTTCGTAGTGACACATG
GCGTACCGTTACCAATGATCGAGATGCTGGCTCGCCAGCATGGCTACCCA
TTTTCCGGGATGGCTCTGTAGTGCGCTTTATGAATCAACACCAAGGATTG
CAAATTCCTAACAGCCAATGGGGCGATTTTCGAATTGCCTAT
back to top