mRNA_E-siliculosus-1a_F_contig15195.3011.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: UPI00164D1D04 (hypothetical protein n=1 Tax=Flavobacterium muglaense TaxID=2764716 RepID=UPI00164D1D04) HSP 1 Score: 126 bits (316), Expect = 1.590e-34 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 1 FDVPEGSLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITLE 348
F+ P+GSL TA + + +EF YLL LYD+DI + +I F LVA A TY + FR +EAG+ DRYY F SAQNV+ FTSSD + LR+DS T LV+EI EGFNFNP FTITL+
Sbjct: 60 FNAPKGSLEATAKLSESVEFPAYLLGLYDIDINQSTINFKLVAKAGDATYGNFFRVLEAGSTDRYYFTFDSAQNVKSFTSSDPAAKLRMDSSTVLVVEIGEGFNFNPDANFTITLK 175
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: A0A4R7K3I1_9FLAO (Uncharacterized protein n=1 Tax=Maribacter spongiicola TaxID=1206753 RepID=A0A4R7K3I1_9FLAO) HSP 1 Score: 128 bits (321), Expect = 1.420e-33 Identity = 71/115 (61.74%), Postives = 82/115 (71.30%), Query Frame = 1
Query: 1 FDVPEGSLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITL 345
F VP GSL T TV +G+EF YLL LYDVD+ E+SI +TLVA A Y S FRTIEAG+ DRYY+ F NV+ FTSSD +V LRIDS T LV+EI EGF F PG +FTITL
Sbjct: 222 FGVPAGSLEATTTVVEGVEFPAYLLGLYDVDVNENSIEYTLVAQAGDPNYGSLFRTIEAGSFDRYYITFGLEHNVESFTSSDPAVNLRIDSDTILVVEIGEGFVFEPGASFTITL 336
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: A0A3A9WYT5_9FLAO (Uncharacterized protein n=2 Tax=Aquimarina sp. AD1 TaxID=1714848 RepID=A0A3A9WYT5_9FLAO) HSP 1 Score: 123 bits (309), Expect = 3.920e-33 Identity = 67/115 (58.26%), Postives = 80/115 (69.57%), Query Frame = 1
Query: 1 FDVPEGSLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITL 345
F P GSL TAT+ + +EF YLL LYD+DI +++I+F LVA TY FRT+E GT DRYY F QNV GFTS + VTLRIDS + LV+EI GFNFNPGT+FTITL
Sbjct: 88 FMQPAGSLEVTATIENAVEFPAYLLGLYDIDIDQNTISFELVAQTGDATYGDLFRTLETGTFDRYYFTFDEPQNVSGFTSDNDYVTLRIDSNSVLVVEIGAGFNFNPGTSFTITL 202
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: A0A176SYP0_9FLAO (Uncharacterized protein n=4 Tax=Polaribacter TaxID=52959 RepID=A0A176SYP0_9FLAO) HSP 1 Score: 122 bits (306), Expect = 5.170e-33 Identity = 63/115 (54.78%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 1 FDVPEGSLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITL 345
F P G+L T+++ + +EF YLL LYD+DI ++SI+F LVA A+ TY FR +EA T DRYY F + Q+V GFTSS++SV LRIDS T LV+EI EG++F PG +FTITL
Sbjct: 60 FHQPAGALAATSSISESVEFPSYLLNLYDIDIDKNSISFELVAKANDATYGDLFRVMEADTYDRYYFTFENTQDVNGFTSSNASVNLRIDSDTVLVVEIGEGYDFKPGQSFTITL 174
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: A0A1H7UQN4_9FLAO (Uncharacterized protein n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A1H7UQN4_9FLAO) HSP 1 Score: 118 bits (295), Expect = 5.470e-31 Identity = 63/115 (54.78%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 1 FDVPEGSLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITL 345
F P GSL TAT+ + +EF YLL LYD+DI +++I+F LVA A TY FRT+E GT DRYY F QNV GF++ + SV LRID+ LV+EI EGF F PG +FTITL
Sbjct: 91 FMQPAGSLEATATIENAVEFPAYLLGLYDIDIDQNTISFELVAQAGDATYGDLFRTLETGTTDRYYFTFDEPQNVSGFSTDNDSVGLRIDANNVLVVEIGEGFEFQPGASFTITL 205
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: A0A1M6QCW8_9FLAO (Uncharacterized protein n=3 Tax=Maribacter TaxID=252356 RepID=A0A1M6QCW8_9FLAO) HSP 1 Score: 114 bits (286), Expect = 5.850e-29 Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 4 DVPEGSLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITL 345
D +L TAT+ D +EF YLL LYDVDI E+SI F + A TY FRTIEAG+ DRYYL F NV+ FTSSD++V LRIDS LV++I EGF F PG +F+IT+
Sbjct: 72 DADPTALSATATIEDAVEFPSYLLGLYDVDIDENSINFQMTAQTGDATYGGFFRTIEAGSFDRYYLTFDEPHNVKSFTSSDAAVNLRIDSDNVLVVQIGEGFVFQPGASFSITV 185
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: A0A150ALP8_9BACT (Uncharacterized protein n=4 Tax=Flammeovirga TaxID=59739 RepID=A0A150ALP8_9BACT) HSP 1 Score: 110 bits (275), Expect = 2.640e-28 Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 1
Query: 16 GSLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITL 345
G AT+ +EF Y+ LYD++I+E +ITF ++AP D T+S +R IEAGT DRYYL F +AQNV+GFTSS+ +V LRIDS LV+EIS+G++FNP FTITL
Sbjct: 68 GDFAADATLSSSVEFPAYI-GLYDINISETTITFDVIAPEDDPTFSGFWRIIEAGTFDRYYLTFENAQNVKGFTSSNPNVRLRIDSEKVLVVEISQGYDFNPDQKFTITL 176
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: UPI00082B5D1F (hypothetical protein n=1 Tax=Labilibacter marinus TaxID=1477105 RepID=UPI00082B5D1F) HSP 1 Score: 90.9 bits (224), Expect = 2.770e-19 Identity = 43/89 (48.31%), Postives = 65/89 (73.03%), Query Frame = 1
Query: 79 LYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITL 345
LY +D++E+SIT+ L+ A+ E + +N+RT+EAG +DRYYL F+ NV FT+S+ ++ LRID+ LV+E+ EGF F PG F+I+L
Sbjct: 89 LYAIDLSENSITYKLLPSAEDEFWKTNYRTLEAGVKDRYYLTFSENHNVSDFTASNPAINLRIDANNVLVVEVGEGFVFQPGAAFSISL 177
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: UPI0015581CE2 (hypothetical protein n=1 Tax=unclassified Lentimicrobium TaxID=2677434 RepID=UPI0015581CE2) HSP 1 Score: 85.9 bits (211), Expect = 1.900e-17 Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 79 LYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITLE 348
LY +DI E+SI + L+ A+ +S N+R +E G DRYY F A V F+S++++V LRIDS LV+EI EGFNF PG FTI L+
Sbjct: 275 LYSIDINENSIDYVLLPDANDYFWSQNYRVLEEGVYDRYYFTFDEAHGVTSFSSTENAVNLRIDSDKILVVEIGEGFNFQPGAAFTIDLK 364
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Match: A0A1H4XM09_9FLAO (Uncharacterized protein n=1 Tax=Tenacibaculum sp. MAR_2009_124 TaxID=1250059 RepID=A0A1H4XM09_9FLAO) HSP 1 Score: 76.3 bits (186), Expect = 6.830e-14 Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 19 SLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYSSNFRTIEAGTEDRYYLNFTSAQNVQGFTSSDSSVTLRIDSPTTLVIEISEGFNFNPGTTFTITL 345
S F TA +G D + LY++++ ++SI++T++ A +S+ F AG DRYY F+ NV GF+S++ + +RIDS T LV+E+SEG++ PG +F I+L
Sbjct: 284 SEFSTALAQNGTPAGD-ISGLYNINLTQNSISYTVLPEATDPFWSNVFGLFPAGKTDRYYFTFSQPHNVTGFSSNEEWINVRIDSDTVLVVELSEGYDLQPGVSFDISL 391 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15195.3011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig15195.3011.1 >prot_E-siliculosus-1a_F_contig15195.3011.1 ID=prot_E-siliculosus-1a_F_contig15195.3011.1|Name=mRNA_E-siliculosus-1a_F_contig15195.3011.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=117bp FDVPEGSLFGTATVGDGLEFDDYLLTLYDVDIAEDSITFTLVAPADSETYback to top mRNA from alignment at E-siliculosus-1a_F_contig15195:649..999- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig15195.3011.1 ID=mRNA_E-siliculosus-1a_F_contig15195.3011.1|Name=mRNA_E-siliculosus-1a_F_contig15195.3011.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=351bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15195:649..999- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15195:649..999- >mRNA_E-siliculosus-1a_F_contig15195.3011.1 ID=mRNA_E-siliculosus-1a_F_contig15195.3011.1|Name=mRNA_E-siliculosus-1a_F_contig15195.3011.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=702bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15195:649..999- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |