mRNA_E-siliculosus-1a_F_contig1517.3003.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: A0A6H5L8F4_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8F4_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.750e-31 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1
Query: 1 REFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDA 177
REFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDA
Sbjct: 181 REFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDA 239
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: D7FPG9_ECTSI (BTB (POZ) domain containing 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG9_ECTSI) HSP 1 Score: 122 bits (306), Expect = 3.400e-31 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1
Query: 1 REFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDA 177
REFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDA
Sbjct: 155 REFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDA 213
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: A0A090X8G6_IXORI (BTB domain-containing protein (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A090X8G6_IXORI) HSP 1 Score: 71.2 bits (173), Expect = 5.800e-13 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 16 HRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAGK 183
HR++ ASCS+YFRALLYGGM ES+ + V LRD E FE ++RY+YTG++ + K
Sbjct: 37 HRLVLASCSSYFRALLYGGMRESQEKEVVLRDTPREAFELLLRYIYTGQLQLSGLK 92
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: B7PM70_IXOSC (BTB and poz domain-containing protein, putative n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7PM70_IXOSC) HSP 1 Score: 70.5 bits (171), Expect = 7.640e-13 Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 1
Query: 16 HRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSV 171
HR++ ASCS+YFRALLYGGM ES+ V LRD E FE ++RY+YTG++ +
Sbjct: 65 HRLILASCSSYFRALLYGGMRESQEEEVVLRDTPREAFELLLRYIYTGQLQL 116
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: A0A4D5S142_IXOSC (BTB domain-containing protein (Fragment) n=4 Tax=Ixodes TaxID=6944 RepID=A0A4D5S142_IXOSC) HSP 1 Score: 70.5 bits (171), Expect = 1.080e-12 Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 1
Query: 16 HRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSV 171
HR++ ASCS+YFRALLYGGM ES+ V LRD E FE ++RY+YTG++ +
Sbjct: 110 HRLILASCSSYFRALLYGGMRESQEEEVVLRDTPREAFELLLRYIYTGQLQL 161
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: UPI00193E4750 (BTB/POZ domain-containing protein 9 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193E4750) HSP 1 Score: 67.8 bits (164), Expect = 9.650e-12 Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 4 EFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAGK 183
F H+V+ A+ S YFRALLYGGM ES +EL+D + E F+A+++Y+YTG +S+ + K
Sbjct: 46 RFHAHKVILAARSEYFRALLYGGMKESHQAEIELKDTSIEAFKALLKYIYTGHLSLTSVK 105
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: A0A7R9FSK5_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9FSK5_9CRUS) HSP 1 Score: 67.0 bits (162), Expect = 1.800e-11 Identity = 27/57 (47.37%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 4 EFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVD 174
F+CH+V+ A+ S YFRALLYGGM ES + L++ + F A+++Y+YTGK+S++
Sbjct: 47 RFKCHKVILAARSEYFRALLYGGMKESRESEIHLKNTSLAAFRALLQYIYTGKMSLN 103
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: A0A812C0G9_SEPPH (BTBD9 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812C0G9_SEPPH) HSP 1 Score: 66.6 bits (161), Expect = 2.450e-11 Identity = 29/61 (47.54%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 7 FRCHRVLFASCSAYFRALLYGGMSESE--TRRVELRDVTPEGFEAIMRYVYTGKVSVDAGK 183
F+CH+V+ A+ S YFRALLYGGM ES+ T+ +EL++ + + F+A+ RY+YTG++++ K
Sbjct: 85 FKCHKVILAARSEYFRALLYGGMLESQPGTKEIELQNTSAKAFDALQRYMYTGRMNLVEAK 145
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: A0A7M7KW05_VARDE (BTB/POZ domain-containing protein 9 n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7KW05_VARDE) HSP 1 Score: 66.2 bits (160), Expect = 3.360e-11 Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 10 RCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAGK 183
+ HR++ ASC YFRALLYGGM ES + VEL D + F+ ++RY+YTG++S+ K
Sbjct: 45 QAHRLVLASCCEYFRALLYGGMRESTQKEVELPDAPLKAFKLLLRYIYTGRLSLSGLK 102
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Match: A0A8J1U5F6_OWEFU (BTB/POZ domain-containing protein 9 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U5F6_OWEFU) HSP 1 Score: 66.2 bits (160), Expect = 3.360e-11 Identity = 29/58 (50.00%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 4 EFRCHRVLFASCSAYFRALLYGGMSESE--TRRVELRDVTPEGFEAIMRYVYTGKVSV 171
EF HRV+ AS S YFRALL+GG+ ES+ +EL+D TP+ F +++Y+YTG+V++
Sbjct: 46 EFHAHRVILASRSDYFRALLFGGLRESQPGVSTIELKDTTPDAFRHLLKYIYTGRVNL 103 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1517.3003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1517.3003.1 >prot_E-siliculosus-1a_F_contig1517.3003.1 ID=prot_E-siliculosus-1a_F_contig1517.3003.1|Name=mRNA_E-siliculosus-1a_F_contig1517.3003.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=62bp REFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVback to top mRNA from alignment at E-siliculosus-1a_F_contig1517:31153..31338+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1517.3003.1 ID=mRNA_E-siliculosus-1a_F_contig1517.3003.1|Name=mRNA_E-siliculosus-1a_F_contig1517.3003.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=186bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1517:31153..31338+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1517:31153..31338+ >mRNA_E-siliculosus-1a_F_contig1517.3003.1 ID=mRNA_E-siliculosus-1a_F_contig1517.3003.1|Name=mRNA_E-siliculosus-1a_F_contig1517.3003.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=372bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1517:31153..31338+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |