mRNA_E-siliculosus-1a_F_contig15162.2996.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15162.2996.1
Unique NamemRNA_E-siliculosus-1a_F_contig15162.2996.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: A0A3S9NUA4_9FLAO (GMC family oxidoreductase n=3 Tax=Maribacter TaxID=252356 RepID=A0A3S9NUA4_9FLAO)

HSP 1 Score: 661 bits (1706), Expect = 3.510e-236
Identity = 311/334 (93.11%), Postives = 321/334 (96.11%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERGRMVKHRDDY+TAN+DPWDFPN GQPTQE IAKQEKQHRTGYTT+AAS MWFVNDLEHPYNE KRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGE LGLPQLPDGQFEPMMELNCVEQHVREKVAENF GRV+TAGRVAHINSDKQFDGDGRSRCQ+RNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLR DSIVHEV+YD D+KKA GVKVIDR+TKE YE+KAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGA GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGRMVKHRDDYETANMDPWDFPNAGQPTQEDIAKQEKQHRTGYTTQAASKMWFVNDLEHPYNEVKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGEKLGLPQLPDGQFEPMMELNCVEQHVREKVAENFNGRVITAGRVAHINSDKQFDGDGRSRCQYRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRPDSIVHEVIYDADSKKATGVKVIDRVTKEVYEYKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGAQGKF 353          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: UPI00110DB5FF (GMC family oxidoreductase n=1 Tax=Muricauda algicola TaxID=2583815 RepID=UPI00110DB5FF)

HSP 1 Score: 616 bits (1589), Expect = 2.160e-218
Identity = 288/334 (86.23%), Postives = 309/334 (92.51%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERGRMVKHR+DY TANLDPWD PN G+PT+E IAKQEKQ+RTGYT K  S  WFV+DL+HPYNETKRFDWMRGYHVGGRS+ WGRHSYRWSD+DF+AN  DGHGVDWPVRYKDIAPWYD+VESYIGVTGE LGLPQLPDGQFEPMMELNCVEQHVR+KV E+F GRV+TAGRVAHINS+K+F+GDGRSRCQFRNRCIRGCPFGAYFSS+SSTLPAAE TGNMTLR DSIVHEV+YDPDTKKA GVKVIDR TKE +EFKAKVIFLCASAIASTSILMQSKSDRF NG+GNDSDQLGRNIMDHHLGVGA GK 
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGRMVKHREDYPTANLDPWDLPNNGEPTREDIAKQEKQNRTGYTVKTPSKHWFVDDLKHPYNETKRFDWMRGYHVGGRSIMWGRHSYRWSDLDFEANKKDGHGVDWPVRYKDIAPWYDRVESYIGVTGEKLGLPQLPDGQFEPMMELNCVEQHVRDKVYEHFDGRVITAGRVAHINSNKKFEGDGRSRCQFRNRCIRGCPFGAYFSSVSSTLPAAERTGNMTLRPDSIVHEVIYDPDTKKATGVKVIDRETKEEFEFKAKVIFLCASAIASTSILMQSKSDRFENGLGNDSDQLGRNIMDHHLGVGAGGKL 353          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: A0A3A1NAT4_9FLAO (GMC family oxidoreductase n=6 Tax=Muricauda TaxID=111500 RepID=A0A3A1NAT4_9FLAO)

HSP 1 Score: 615 bits (1585), Expect = 8.760e-218
Identity = 291/334 (87.13%), Postives = 308/334 (92.22%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERG MVKHRDDY TAN+DPWDFP+GG+ T+E   KQEKQ RTGYTT AAS  WFVNDLEHPYNETKRFDWMRGYHVGGRS+ WGRHSYRWSDIDF AN  DG  VDWPVRYKDIAPWYDKVESYIGV+GE LGLPQLPDGQFEPMMELNCVE HVREKVAENF GRV+TAGRVAHINSDK+F+GDGR RCQFRNRCIRGCPFGAYFSS+SSTLPAAEATGNMTLR DSIVHEV+YDP+TKKA GVKVIDR TKE +EFKAKVIFLCASAIASTSILMQSKSDRFP+G+GNDSDQLGRNIMDHHLGVGA+GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGPMVKHRDDYPTANMDPWDFPHGGRITREDKEKQEKQSRTGYTTSAASKHWFVNDLEHPYNETKRFDWMRGYHVGGRSIMWGRHSYRWSDIDFTANKKDGIAVDWPVRYKDIAPWYDKVESYIGVSGENLGLPQLPDGQFEPMMELNCVEDHVREKVAENFGGRVITAGRVAHINSDKKFEGDGRVRCQFRNRCIRGCPFGAYFSSVSSTLPAAEATGNMTLRPDSIVHEVIYDPNTKKATGVKVIDRETKEEFEFKAKVIFLCASAIASTSILMQSKSDRFPDGLGNDSDQLGRNIMDHHLGVGASGKF 353          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: A0A3M8GP32_9FLAO (GMC family oxidoreductase n=3 Tax=unclassified Muricauda TaxID=2615049 RepID=A0A3M8GP32_9FLAO)

HSP 1 Score: 610 bits (1574), Expect = 4.110e-216
Identity = 286/334 (85.63%), Postives = 308/334 (92.22%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERGRMVKHR+DY TANLD WDFP+  Q TQE I KQEKQHRTGYTT+A S  WFVNDLEHPYNETKRFDWMRGYHVGGRS+ WGRHSYRWSD+DF+AN  DG+GVDWPVRYKDIAPWY+ VE YIGV+GE LGLPQLPD  FEP+MELNCVEQHVRE+VAE+F GRV+TAGRVAHINSDK+F+GDGR RCQFRNRCIRGCPFGAYFSS+SSTLPAAEATGNMTLR DSIVH+VMYDPDTKKA GVKVIDR+TKE +EFKAKVIFLCASAIASTSILMQSKSDRFPNG+GNDSDQLGRNIMDHHL VGA+GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGRMVKHREDYPTANLDTWDFPHARQATQEDIRKQEKQHRTGYTTRADSKHWFVNDLEHPYNETKRFDWMRGYHVGGRSIMWGRHSYRWSDLDFEANKKDGYGVDWPVRYKDIAPWYEHVERYIGVSGEALGLPQLPDSVFEPVMELNCVEQHVREQVAEHFDGRVITAGRVAHINSDKRFEGDGRVRCQFRNRCIRGCPFGAYFSSVSSTLPAAEATGNMTLRPDSIVHQVMYDPDTKKATGVKVIDRVTKEEFEFKAKVIFLCASAIASTSILMQSKSDRFPNGLGNDSDQLGRNIMDHHLNVGASGKF 353          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: UPI0019397117 (GMC family oxidoreductase n=1 Tax=Aurantibacter crassamenti TaxID=1837375 RepID=UPI0019397117)

HSP 1 Score: 609 bits (1570), Expect = 1.670e-215
Identity = 287/334 (85.93%), Postives = 305/334 (91.32%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERGRMVKHRDDY+TAN DPWDFPN GQPT+E+IAKQ KQ+RTGYTT  A++MWFVNDLEHPYNE KRFDWMRGYH+GGRSLQWGRHSYRWSDIDF AN NDG  VDWPVRYKDIAPWYDKVE+YIGVTGE LGL QLPDGQFEPMM  NCVE+H RE V+E   GRVVT GR AHINSDKQFDGDGR+RCQ+RNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLR DSIVHEV+YD DTKKA GVKVIDRLTKET+EFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDS QLG+N+MDHH  VGA+GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGRMVKHRDDYETANKDPWDFPNAGQPTKEIIAKQPKQNRTGYTTSQANHMWFVNDLEHPYNEIKRFDWMRGYHLGGRSLQWGRHSYRWSDIDFTANKNDGIAVDWPVRYKDIAPWYDKVETYIGVTGEKLGLKQLPDGQFEPMMPHNCVEKHFREHVSEKLDGRVVTVGRTAHINSDKQFDGDGRTRCQYRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRPDSIVHEVIYDADTKKATGVKVIDRLTKETFEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSGQLGQNLMDHHFRVGASGKF 353          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: A0A0D5YTD8_9FLAO (GMC family oxidoreductase n=7 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A0D5YTD8_9FLAO)

HSP 1 Score: 608 bits (1568), Expect = 3.360e-215
Identity = 285/334 (85.33%), Postives = 308/334 (92.22%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERGRMVKHR+DY TAN+DPWDFP+ G+  +E  AKQ+KQ RTGYT KA  N WFVNDLEHPYNE KRFDWMRGYHVGGRS+ WGRHSYRWSDIDF+AN  DG  VDWPVRYKDIAPWYDKVE+YIGVTGE LGLPQLPDG FEPMMELNCVEQHVREKVAE+F GRVVTAGRVAHINSDK+F+GDGR+RCQFRNRCIRGCPFGAYFSS+SSTLPAAE TGNMTLR DSIVH+V+YDPDTKKA GVKVIDR+TKE +EFKAKVIFLCASAIAST+ILMQSKSDRFP+G+GNDSDQLGRNIMDHHLGVGA+GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGRMVKHREDYPTANMDPWDFPHNGELPREEQAKQQKQARTGYTVKAPHNFWFVNDLEHPYNEIKRFDWMRGYHVGGRSIMWGRHSYRWSDIDFEANKRDGIAVDWPVRYKDIAPWYDKVEAYIGVTGEKLGLPQLPDGVFEPMMELNCVEQHVREKVAEHFDGRVVTAGRVAHINSDKKFEGDGRTRCQFRNRCIRGCPFGAYFSSVSSTLPAAERTGNMTLRPDSIVHQVIYDPDTKKATGVKVIDRVTKEEFEFKAKVIFLCASAIASTAILMQSKSDRFPDGLGNDSDQLGRNIMDHHLGVGASGKF 353          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: A0A849FP58_9FLAO (GMC family oxidoreductase n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A849FP58_9FLAO)

HSP 1 Score: 603 bits (1556), Expect = 2.090e-213
Identity = 287/334 (85.93%), Postives = 307/334 (91.92%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERGRMV+H  DY TA++DPWDFPNGGQPT+E+I KQEKQ RT YTT+AAS  WFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYR+S+IDF AN  +G  VDWPVRYKDIAPWYDKVESYIGVTGE LGL  LPDGQFEPMMELNC+EQHVREKVAENF  RV+T GR+AHINSDK+F+  GR RCQFR+RCIRGCPFGAYFSSLSSTLPAAE TGNMTLR DSIVHEV+YDPDTKKA GVKVIDR+TKET+EFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGA+GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGRMVEHITDYTTAHMDPWDFPNGGQPTKEIIIKQEKQSRTNYTTEAASAQWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRFSEIDFTANAREGIAVDWPVRYKDIAPWYDKVESYIGVTGEKLGLAHLPDGQFEPMMELNCLEQHVREKVAENFDDRVITGGRIAHINSDKRFE--GRQRCQFRDRCIRGCPFGAYFSSLSSTLPAAERTGNMTLRPDSIVHEVVYDPDTKKATGVKVIDRVTKETHEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGASGKF 351          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: A0A223V3M4_9FLAO (GMC family oxidoreductase n=5 Tax=Maribacter TaxID=252356 RepID=A0A223V3M4_9FLAO)

HSP 1 Score: 602 bits (1551), Expect = 1.290e-212
Identity = 284/334 (85.03%), Postives = 304/334 (91.02%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERGRMVKH +DY+TAN DPWDFPNGG  T+E+I +Q KQ+RTGYTT  AS+MWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDF+AN  DG  VDWPVRYKDIAPWY KVE++IGV+GE L LPQLPD  F PMMELNCVEQHVREKVAENF GRV+TAGRVAHI  DK+FD  GR++CQFRNRCIRGCPFG YFSSLSSTLPAAEATGNMTLR DSIVHE+MYDPDTK+A GVKVIDR+TKE YEFK+KVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGA GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGRMVKHIEDYETANKDPWDFPNGGVATKEIIEQQPKQNRTGYTTSQASHMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFEANKRDGIAVDWPVRYKDIAPWYSKVENFIGVSGEALNLPQLPDSDFLPMMELNCVEQHVREKVAENFGGRVITAGRVAHITGDKKFD--GRTKCQFRNRCIRGCPFGGYFSSLSSTLPAAEATGNMTLRPDSIVHEIMYDPDTKRATGVKVIDRVTKEAYEFKSKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGATGKF 351          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: G2PQG5_MURRD (Glucose-methanol-choline oxidoreductase n=23 Tax=Flavobacteriia TaxID=117743 RepID=G2PQG5_MURRD)

HSP 1 Score: 600 bits (1547), Expect = 5.210e-212
Identity = 284/334 (85.03%), Postives = 302/334 (90.42%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERG MVKHRDDY TAN DPWDFP+ G  T+E I KQEKQ RTGYTT AAS  WFVNDL+HPYNETKRFDWMRGYHVGGRS+ WGRHSYRWSDIDF AN N+G  VDWPVRYKDIAPWYDKVESYIGV+GE LGLPQLPDG+FEPMMELNCVE HVR KVAE+F GRV+TAGRVAHINSDKQFDGDGR RCQFRNRCIRGCPFGAYFSS+SSTLPAAEATGNMTLR DSIVHEV+YDP+TKKA GVKVIDR TKE +EFKAKVIFLCASA+ASTSILMQSKSDRFPNG+GNDS +LG NIMDHH  VGA+GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGPMVKHRDDYPTANKDPWDFPHAGTATREDIKKQEKQSRTGYTTGAASKHWFVNDLDHPYNETKRFDWMRGYHVGGRSIMWGRHSYRWSDIDFTANKNEGIAVDWPVRYKDIAPWYDKVESYIGVSGENLGLPQLPDGKFEPMMELNCVEDHVRGKVAEHFNGRVITAGRVAHINSDKQFDGDGRVRCQFRNRCIRGCPFGAYFSSVSSTLPAAEATGNMTLRPDSIVHEVIYDPNTKKATGVKVIDRETKEEFEFKAKVIFLCASAVASTSILMQSKSDRFPNGLGNDSGELGHNIMDHHFLVGASGKF 353          
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Match: A0A7H9AP21_9FLAO (GMC family oxidoreductase n=1 Tax=Costertonia aggregata TaxID=343403 RepID=A0A7H9AP21_9FLAO)

HSP 1 Score: 599 bits (1544), Expect = 1.390e-211
Identity = 286/334 (85.63%), Postives = 303/334 (90.72%), Query Frame = 1
Query:    1 TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQPTQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVTGETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINSDKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDSIVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQSKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF 1002
            TG SGGW AKE+CENGLKTLVLERGRMVKH +DY+TAN+DPWDFPN GQPT+E IAKQEKQ+RTGYTT AAS MWFVNDLEHPYNE KRFDWMRGYHVGGRSLQWGRHSYRWSDIDF AN  +G  +DWPVRYKDIAPWY+KVE+YIGV+GE L LPQLPD  F PMMELNCVEQ  REKVAENF GRVVTAGRVAHI   K FD  GRS+CQ+RNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLR DSIVHEVMYDPDTKKA GVKVIDR+TKET+EFKAKVIFLCASAIASTSILMQSKSDRFP+GMGNDSDQLGRNIMDH L VGA+GKF
Sbjct:   20 TGISGGWAAKELCENGLKTLVLERGRMVKHIEDYETANMDPWDFPNAGQPTREDIAKQEKQNRTGYTTNAASKMWFVNDLEHPYNEKKRFDWMRGYHVGGRSLQWGRHSYRWSDIDFTANAKEGIAIDWPVRYKDIAPWYEKVETYIGVSGEALNLPQLPDSNFLPMMELNCVEQDFREKVAENFDGRVVTAGRVAHITGTKNFD--GRSKCQYRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRPDSIVHEVMYDPDTKKATGVKVIDRVTKETFEFKAKVIFLCASAIASTSILMQSKSDRFPDGMGNDSDQLGRNIMDHQLQVGASGKF 351          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15162.2996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S9NUA4_9FLAO3.510e-23693.11GMC family oxidoreductase n=3 Tax=Maribacter TaxID... [more]
UPI00110DB5FF2.160e-21886.23GMC family oxidoreductase n=1 Tax=Muricauda algico... [more]
A0A3A1NAT4_9FLAO8.760e-21887.13GMC family oxidoreductase n=6 Tax=Muricauda TaxID=... [more]
A0A3M8GP32_9FLAO4.110e-21685.63GMC family oxidoreductase n=3 Tax=unclassified Mur... [more]
UPI00193971171.670e-21585.93GMC family oxidoreductase n=1 Tax=Aurantibacter cr... [more]
A0A0D5YTD8_9FLAO3.360e-21585.33GMC family oxidoreductase n=7 Tax=Flavobacteriacea... [more]
A0A849FP58_9FLAO2.090e-21385.93GMC family oxidoreductase n=1 Tax=Maribacter sp. T... [more]
A0A223V3M4_9FLAO1.290e-21285.03GMC family oxidoreductase n=5 Tax=Maribacter TaxID... [more]
G2PQG5_MURRD5.210e-21285.03Glucose-methanol-choline oxidoreductase n=23 Tax=F... [more]
A0A7H9AP21_9FLAO1.390e-21185.63GMC family oxidoreductase n=1 Tax=Costertonia aggr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15162contigE-siliculosus-1a_F_contig15162:2..1003 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1002
Model size1002
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
COG Functional cat.E
EggNOG OGs1HWUY@117743,4NEF2@976,COG2303@1,COG2303@2
EggNOG free text desc.COG2303 Choline dehydrogenase and related
Seed eggNOG ortholog1250232.JQNJ01000001_gene1461
Seed ortholog evalue9.6e-170
Seed ortholog score602.8
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928027.5091934-CDS-E-siliculosus-1a_F_contig15162:1..10031622928027.5091934-CDS-E-siliculosus-1a_F_contig15162:1..1003Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15162 2..1003 -
1696318778.003433-CDS-E-siliculosus-1a_F_contig15162:1..10031696318778.003433-CDS-E-siliculosus-1a_F_contig15162:1..1003Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15162 2..1003 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15162.2996.1prot_E-siliculosus-1a_F_contig15162.2996.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15162 2..1003 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15162.2996.1

>prot_E-siliculosus-1a_F_contig15162.2996.1 ID=prot_E-siliculosus-1a_F_contig15162.2996.1|Name=mRNA_E-siliculosus-1a_F_contig15162.2996.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=334bp
TGGSGGWGAKEVCENGLKTLVLERGRMVKHRDDYKTANLDPWDFPNGGQP
TQEMIAKQEKQHRTGYTTKAASNMWFVNDLEHPYNETKRFDWMRGYHVGG
RSLQWGRHSYRWSDIDFKANLNDGHGVDWPVRYKDIAPWYDKVESYIGVT
GETLGLPQLPDGQFEPMMELNCVEQHVREKVAENFYGRVVTAGRVAHINS
DKQFDGDGRSRCQFRNRCIRGCPFGAYFSSLSSTLPAAEATGNMTLRVDS
IVHEVMYDPDTKKAIGVKVIDRLTKETYEFKAKVIFLCASAIASTSILMQ
SKSDRFPNGMGNDSDQLGRNIMDHHLGVGANGKF
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mRNA from alignment at E-siliculosus-1a_F_contig15162:2..1003-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15162.2996.1 ID=mRNA_E-siliculosus-1a_F_contig15162.2996.1|Name=mRNA_E-siliculosus-1a_F_contig15162.2996.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1002bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15162:2..1003- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACAGGGGGCAGCGGTGGCTGGGGTGCGAAAGAAGTATGTGAAAACGGCTT AAAAACATTAGTGTTGGAGCGCGGGCGCATGGTAAAGCATCGCGATGACT ACAAAACAGCAAACTTAGATCCTTGGGATTTTCCAAATGGTGGCCAACCC ACACAAGAGATGATCGCAAAACAAGAAAAACAACATAGAACTGGTTATAC GACCAAAGCTGCTAGCAATATGTGGTTTGTAAATGATTTGGAGCATCCAT ACAATGAAACAAAACGTTTTGATTGGATGCGTGGTTATCATGTAGGAGGA CGTTCATTACAATGGGGTCGCCATAGCTATCGTTGGAGTGATATTGATTT CAAAGCAAACTTAAACGACGGGCACGGTGTTGATTGGCCTGTTCGTTATA AAGATATCGCACCTTGGTATGACAAAGTAGAATCCTATATCGGTGTTACT GGTGAAACCTTAGGCCTTCCTCAATTACCTGATGGACAATTTGAGCCTAT GATGGAATTGAACTGTGTTGAACAGCACGTTCGAGAGAAAGTAGCAGAAA ATTTTTACGGTCGCGTTGTTACTGCTGGTCGCGTGGCACATATCAATAGT GACAAACAATTTGATGGCGATGGAAGATCTAGATGTCAGTTTAGAAATCG TTGTATTCGTGGGTGTCCTTTTGGAGCATACTTCAGTAGCTTATCATCAA CTTTACCAGCTGCAGAAGCAACTGGAAACATGACTTTGCGAGTGGACTCT ATTGTACATGAAGTAATGTACGATCCTGATACAAAGAAAGCTATTGGGGT TAAAGTCATTGACAGACTTACCAAAGAAACATACGAATTTAAAGCAAAAG TGATTTTCCTTTGTGCTTCTGCAATAGCATCAACATCTATTTTAATGCAA TCAAAATCAGACCGTTTTCCTAACGGAATGGGTAATGATTCAGACCAATT GGGGCGCAACATCATGGATCACCATTTAGGTGTAGGGGCTAATGGCAAAT TC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15162:2..1003-

>mRNA_E-siliculosus-1a_F_contig15162.2996.1 ID=mRNA_E-siliculosus-1a_F_contig15162.2996.1|Name=mRNA_E-siliculosus-1a_F_contig15162.2996.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2004bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15162:2..1003- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACAGGGGGCAGCGGTGGCTGGGGTGCGAAAGAAGTATGTGAAAACGGCTT
AAAAACATTAGTGTTGGAGCGCGGGCGCATGGTAAAGCATCGCGATGACT
ACAAAACAGCAAACTTAGATCCTTGGGATTTTCCAAATGGTGGCCAACCC
ACACAAGAGATGATCGCAAAACAAGAAAAACAACATAGAACTGGTTATAC
GACCAAAGCTGCTAGCAATATGTGGTTTGTAAATGATTTGGAGCATCCAT
ACAATGAAACAAAACGTTTTGATTGGATGCGTGGTTATCATGTAGGAGGA
CGTTCATTACAATGGGGTCGCCATAGCTATCGTTGGAGTGATATTGATTT
CAAAGCAAACTTAAACGACGGGCACGGTGTTGATTGGCCTGTTCGTTATA
AAGATATCGCACCTTGGTATGACAAAGTAGAATCCTATATCGGTGTTACT
GGTGAAACCTTAGGCCTTCCTCAATTACCTGATGGACAATTTGAGCCTAT
GATGGAATTGAACTGTGTTGAACAGCACGTTCGAGAGAAAGTAGCAGAAA
ATTTTTACGGTCGCGTTGTTACTGCTGGTCGCGTGGCACATATCAATAGT
GACAAACAATTTGATGGCGATGGAAGATCTAGATGTCAGTTTAGAAATCG
TTGTATTCGTGGGTGTCCTTTTGGAGCATACTTCAGTAGCTTATCATCAA
CTTTACCAGCTGCAGAAGCAACTGGAAACATGACTTTGCGAGTGGACTCT
ATTGTACATGAAGTAATGTACGATCCTGATACAAAGAAAGCTATTGGGGT
TAAAGTCATTGACAGACTTACCAAAGAAACATACGAATTTAAAGCAAAAG
TGATTTTCCTTTGTGCTTCTGCAATAGCATCAACATCTATTTTAATGCAA
TCAAAATCAGACCGTTTTCCTAACGGAATGGGTAATGATTCAGACCAATT
GGGGCGCAACATCATGGATCACCATTTAGGTGTAGGGGCTAATGGCAAAT
TCACAGGGGGCAGCGGTGGCTGGGGTGCGAAAGAAGTATGTGAAAACGGC
TTAAAAACATTAGTGTTGGAGCGCGGGCGCATGGTAAAGCATCGCGATGA
CTACAAAACAGCAAACTTAGATCCTTGGGATTTTCCAAATGGTGGCCAAC
CCACACAAGAGATGATCGCAAAACAAGAAAAACAACATAGAACTGGTTAT
ACGACCAAAGCTGCTAGCAATATGTGGTTTGTAAATGATTTGGAGCATCC
ATACAATGAAACAAAACGTTTTGATTGGATGCGTGGTTATCATGTAGGAG
GACGTTCATTACAATGGGGTCGCCATAGCTATCGTTGGAGTGATATTGAT
TTCAAAGCAAACTTAAACGACGGGCACGGTGTTGATTGGCCTGTTCGTTA
TAAAGATATCGCACCTTGGTATGACAAAGTAGAATCCTATATCGGTGTTA
CTGGTGAAACCTTAGGCCTTCCTCAATTACCTGATGGACAATTTGAGCCT
ATGATGGAATTGAACTGTGTTGAACAGCACGTTCGAGAGAAAGTAGCAGA
AAATTTTTACGGTCGCGTTGTTACTGCTGGTCGCGTGGCACATATCAATA
GTGACAAACAATTTGATGGCGATGGAAGATCTAGATGTCAGTTTAGAAAT
CGTTGTATTCGTGGGTGTCCTTTTGGAGCATACTTCAGTAGCTTATCATC
AACTTTACCAGCTGCAGAAGCAACTGGAAACATGACTTTGCGAGTGGACT
CTATTGTACATGAAGTAATGTACGATCCTGATACAAAGAAAGCTATTGGG
GTTAAAGTCATTGACAGACTTACCAAAGAAACATACGAATTTAAAGCAAA
AGTGATTTTCCTTTGTGCTTCTGCAATAGCATCAACATCTATTTTAATGC
AATCAAAATCAGACCGTTTTCCTAACGGAATGGGTAATGATTCAGACCAA
TTGGGGCGCAACATCATGGATCACCATTTAGGTGTAGGGGCTAATGGCAA
ATTC
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