mRNA_E-siliculosus-1a_F_contig15147.2988.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15147.2988.1
Unique NamemRNA_E-siliculosus-1a_F_contig15147.2988.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: H0J3A5_9GAMM (Proline--tRNA ligase n=103 Tax=root TaxID=1 RepID=H0J3A5_9GAMM)

HSP 1 Score: 599 bits (1544), Expect = 1.770e-211
Identity = 307/334 (91.92%), Postives = 316/334 (94.61%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            ASLK+TYQ MYDAYTRIFTRLGL+FRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSN SDYAAN+EKAEAL APLGS   RA PSE +RLVDTPDAKTIAALV+QF LPIEKTVKTLMVHA EGGLIALLVRGDHELNEVKAENL  V  PLTMASEEEIRAAVGAGPGSLGPVGL +PVIIDRSVALMSDFGAGANV+ KHYFGINWERD ALP VADLRNVVEGDPSPDG+GTLSIKRGIEVGHVFQLGQKYSQAMNA+VLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL
Sbjct:  168 ASLKETYQGMYDAYTRIFTRLGLDFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNESDYAANIEKAEALPAPLGSNPERAAPSEEMRLVDTPDAKTIAALVEQFKLPIEKTVKTLMVHAAEGGLIALLVRGDHELNEVKAENLPQVNPPLTMASEEEIRAAVGAGPGSLGPVGLKLPVIIDRSVALMSDFGAGANVDGKHYFGINWERDAALPQVADLRNVVEGDPSPDGKGTLSIKRGIEVGHVFQLGQKYSQAMNASVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 501
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BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: A0A1M7EXH3_9GAMM (Proline--tRNA ligase n=1 Tax=Halomonas subglaciescola TaxID=29571 RepID=A0A1M7EXH3_9GAMM)

HSP 1 Score: 585 bits (1509), Expect = 3.550e-206
Identity = 294/334 (88.02%), Postives = 315/334 (94.31%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            ASLKQTYQ MYDAY+RIFTRLGL+FRPVIADNGSIGGTGSHEFHVLADSGEDDIVFS  SDYAANMEKAEAL AP+GS+AT A P+E LRLVDTPDAKTIAALV+QF LPIEKTVKTLMVHA E GL+AL++RGDH LN+VKAENLA VA+PL MASEEEIRAAVGAGPGSLGPV L++P+IIDRSVALM DFGAGANV+DKHYFGINWERD ALP+VADLRNVVEGDPSPDGQGTL+IKRGIEVGHVFQLGQKYS+AMNA VLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHD +GIIWPNA+APFQVALVPMNAHKSQRVREE+ERLYQ L
Sbjct:  168 ASLKQTYQGMYDAYSRIFTRLGLDFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSTGSDYAANMEKAEALPAPVGSEATCATPAEELRLVDTPDAKTIAALVEQFELPIEKTVKTLMVHAAEDGLVALIIRGDHTLNDVKAENLAQVASPLAMASEEEIRAAVGAGPGSLGPVNLDLPIIIDRSVALMHDFGAGANVDDKHYFGINWERDAALPEVADLRNVVEGDPSPDGQGTLAIKRGIEVGHVFQLGQKYSEAMNATVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDAAGIIWPNALAPFQVALVPMNAHKSQRVREEAERLYQTL 501
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BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: A0A0P8B978_9GAMM (Proline--tRNA ligase n=4 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A0P8B978_9GAMM)

HSP 1 Score: 580 bits (1496), Expect = 3.590e-204
Identity = 295/334 (88.32%), Postives = 310/334 (92.81%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            ASLK TYQ MYDAY RIFTRLGL+FRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAAN+EKAEAL APLGS  TRA P E +RLVDTPDAKTIAALVKQF L IEKTVKTL+V  TE  L+ALLVRGDHELNEVKAENL  VA+PLTMASEEEIRAA+GAGPGSLGPVGL +P+IIDRSVALMSDFGAGAN+EDKHYFGINWERD  LP VADLRNVVEGDPSPDG GTLSIKRGIEVGHVFQLG+KYS+AMNA+VLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHD +GIIWPNA+APF VALVPMNAHKSQRVREESERLYQAL
Sbjct:  168 ASLKDTYQAMYDAYIRIFTRLGLDFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANIEKAEALPAPLGSDVTRAAPQEDMRLVDTPDAKTIAALVKQFGLAIEKTVKTLIVKGTEDDLVALLVRGDHELNEVKAENLPQVASPLTMASEEEIRAAIGAGPGSLGPVGLKLPIIIDRSVALMSDFGAGANIEDKHYFGINWERDTPLPTVADLRNVVEGDPSPDGHGTLSIKRGIEVGHVFQLGKKYSEAMNASVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDAAGIIWPNALAPFHVALVPMNAHKSQRVREESERLYQAL 501
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BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: A0A7X4G0G1_9GAMM (Proline--tRNA ligase n=2 Tax=Halomonas TaxID=2745 RepID=A0A7X4G0G1_9GAMM)

HSP 1 Score: 578 bits (1490), Expect = 2.820e-203
Identity = 294/334 (88.02%), Postives = 313/334 (93.71%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            ASLK TYQ+MYDAY+RIFTRLGL+FRPVIADNGSIGGTGSHEFHVLADSGEDDIVFS  S+YAAN+EKAEAL+APLGS   R   +EALRLVDTP+AKTIAALV+QF LPIEKTVKTLMVHA EGGLIALLVRGDHELN+VKAEN  AVAAPLTMASEEEIRAA+GAGPGSLGP+ LN P+IIDRSVALMSDFGAGANV+DKHYFGINWERDVAL +VADLRNVVEGDPSPDG+GTLSIKRGIEVGHVFQLG+KYS+AMNA VLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDE GIIWPNAIAPF VALVPMNAHKSQRVREES+RLY  L
Sbjct:  168 ASLKATYQNMYDAYSRIFTRLGLDFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSTQSNYAANIEKAEALAAPLGSNPERPAANEALRLVDTPNAKTIAALVEQFKLPIEKTVKTLMVHAAEGGLIALLVRGDHELNDVKAENHPAVAAPLTMASEEEIRAAIGAGPGSLGPINLNTPIIIDRSVALMSDFGAGANVDDKHYFGINWERDVALSEVADLRNVVEGDPSPDGKGTLSIKRGIEVGHVFQLGKKYSEAMNATVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDEVGIIWPNAIAPFHVALVPMNAHKSQRVREESQRLYHTL 501
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BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: UPI0005BDA548 (proline--tRNA ligase n=1 Tax=Halomonas xinjiangensis TaxID=1166948 RepID=UPI0005BDA548)

HSP 1 Score: 568 bits (1465), Expect = 1.540e-199
Identity = 286/334 (85.63%), Postives = 308/334 (92.22%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            ASL +TYQ MYD Y RIFTRLGL+FRPV+ADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAAN+EKAEAL APLGSQ  RA P E LRL++TPDAKTIAALV+Q  LPIEKT+KTLMVHA+EGGL+ALL+RGDHELNEVKAENL AVAAPLTMASEEEIRAAVGAGPGSLGPV L+MP+IIDRSVALMSDFGAGAN++ KHYFGINWERDVALP VADLR VVEGDPSPDGQGTLSIKRGIEVGHVFQLG+KYS+AMNA VL DNGK +HPWMGCYGIGVTRVVAAAIEQNHD+ GIIWPNAIAPFQV +VPMNAHKS+RVRE  ERL+  L
Sbjct:  168 ASLLETYQTMYDTYVRIFTRLGLDFRPVLADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANIEKAEALPAPLGSQPERAAPGEELRLIETPDAKTIAALVQQHGLPIEKTIKTLMVHASEGGLVALLIRGDHELNEVKAENLDAVAAPLTMASEEEIRAAVGAGPGSLGPVNLDMPIIIDRSVALMSDFGAGANIDGKHYFGINWERDVALPRVADLRKVVEGDPSPDGQGTLSIKRGIEVGHVFQLGRKYSEAMNATVLDDNGKATHPWMGCYGIGVTRVVAAAIEQNHDDGGIIWPNAIAPFQVMIVPMNAHKSERVRETGERLHAEL 501
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BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: A0A1G9Y987_9GAMM (Proline--tRNA ligase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1G9Y987_9GAMM)

HSP 1 Score: 568 bits (1464), Expect = 2.590e-199
Identity = 288/334 (86.23%), Postives = 309/334 (92.51%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            A LK++YQ MYDAY RIFTRLGL+FR V ADNG IGGTGSHEF VLADSGED +VFS  SDYAAN+EKAEAL+APLGS   RA PSE LRLVDTP+AKTIA LV+QF LPIEKTVKTLMVHA EGGLIALLVRGDHELN+VKAENLA VAAPLTMASEEEIRAAVGAGPGSLGPV L+MP+I+DRSVALMSDFGAGAN + KHYFGINWERD ALP+VADLRNVVEGDPSPDG+GTL+IKRGIEVGHVFQLGQKYS++MNA VLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHD++GIIWPNA+APF VALVPMNAHKSQRVREESERLYQAL
Sbjct:  168 AGLKRSYQLMYDAYMRIFTRLGLDFRAVEADNGDIGGTGSHEFQVLADSGEDAVVFSTESDYAANIEKAEALAAPLGSNTERAAPSEELRLVDTPNAKTIATLVEQFKLPIEKTVKTLMVHAAEGGLIALLVRGDHELNDVKAENLAQVAAPLTMASEEEIRAAVGAGPGSLGPVNLDMPIIVDRSVALMSDFGAGANTDGKHYFGINWERDAALPEVADLRNVVEGDPSPDGKGTLAIKRGIEVGHVFQLGQKYSESMNATVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDDAGIIWPNALAPFHVALVPMNAHKSQRVREESERLYQAL 501
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BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: UPI00037A7F34 (proline--tRNA ligase n=1 Tax=Halomonas jeotgali TaxID=553386 RepID=UPI00037A7F34)

HSP 1 Score: 567 bits (1461), Expect = 6.030e-199
Identity = 286/334 (85.63%), Postives = 306/334 (91.62%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            ASLK +YQ MYDAYTRIFTRLGL+FRPVIADNGSIGGTGSHEFHVLADSGEDDIVFS  SDYAANMEKAEAL+AP GS A R  P+E LR VDTPDA TIA LV+QF LP+EKTVKTLMV  +EGGL+AL++RGDH LN+VKAENL  VAAPL MASEE IRAAVGAGPGSLGPV LNMP++IDRSVALMSDF AGANVE KHYFGINWERD ALPDVADLRNVVEGDPSPDGQGTL+IKRGIEVGHVFQLGQKYS+AMNA VLG+NGKTSHPWMGCYGIGVTRVVAAAIEQNHD++GIIWP+AIAPFQVALVPMNAHKSQRVREE+E LYQ L
Sbjct:  168 ASLKASYQGMYDAYTRIFTRLGLDFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSTQSDYAANMEKAEALAAPKGSDANRDAPAEELRRVDTPDATTIAQLVEQFELPVEKTVKTLMVEGSEGGLVALIIRGDHTLNDVKAENLPGVAAPLVMASEEAIRAAVGAGPGSLGPVELNMPIVIDRSVALMSDFAAGANVEGKHYFGINWERDAALPDVADLRNVVEGDPSPDGQGTLAIKRGIEVGHVFQLGQKYSEAMNATVLGENGKTSHPWMGCYGIGVTRVVAAAIEQNHDDAGIIWPDAIAPFQVALVPMNAHKSQRVREEAENLYQTL 501
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: A0A7X3KRU9_9GAMM (Proline--tRNA ligase n=1 Tax=Halomonas zhuhanensis TaxID=2684210 RepID=A0A7X3KRU9_9GAMM)

HSP 1 Score: 564 bits (1453), Expect = 1.020e-197
Identity = 285/334 (85.33%), Postives = 305/334 (91.32%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            ASLK TYQ MYDAYTRIFTRLGL+FRPVIADNG+IGGTGSHEFHVLA+SGEDDIVFSNASDYAAN+EKAEAL APLG    R  PSE LRLVDTP+AKTIA LV+QF LPIEKT+KTL+V A +GGLI LLVRGDHELNEVKAENL  VA PLTMA+EEEIRAAVGAGPGSLGPV L++P+I DRSV LMSDFGAGAN++ KHYFGINWERDVALP VADLR V EGDPSPDGQGTL IKRGIEVGHVFQLGQKYS+A+ A+VLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHD++GIIWPNAIAPF VALVPMNAHKSQRVREESERLYQ L
Sbjct:  168 ASLKDTYQGMYDAYTRIFTRLGLDFRPVIADNGAIGGTGSHEFHVLAESGEDDIVFSNASDYAANIEKAEALPAPLGETPERPAPSEELRLVDTPNAKTIATLVEQFKLPIEKTIKTLIVKAEQGGLIVLLVRGDHELNEVKAENLPQVAVPLTMATEEEIRAAVGAGPGSLGPVNLDLPIIADRSVVLMSDFGAGANIDHKHYFGINWERDVALPQVADLRKVAEGDPSPDGQGTLLIKRGIEVGHVFQLGQKYSEALGASVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDDAGIIWPNAIAPFHVALVPMNAHKSQRVREESERLYQLL 501
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: A0A3N9U2E5_9GAMM (Proline--tRNA ligase n=10 Tax=Halomonadaceae TaxID=28256 RepID=A0A3N9U2E5_9GAMM)

HSP 1 Score: 560 bits (1443), Expect = 3.380e-196
Identity = 282/334 (84.43%), Postives = 303/334 (90.72%), Query Frame = 1 
Query:    1 ASLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            ASLK TYQ MYDAY RIFTRLGL+FRPVIADNGSIGGTGSHEFHVLADSGEDDIVFS  SDYAANMEKAEAL APL S A RA+P+E LRLVDTP+AKTIA LV+Q  LPIEKT+KTLMVH  EGGL+ALLVRGDHELNEVKAE+L  VA PLTMASEEEIRAAVGAGPGSLGPVGL MP++IDRSVALMSDFGAGANV+ KHYFGINWERDVALP VADLRNVVEGDPSPDG+G LSIKRGIEVGHVFQLG+KYS+AMNA VLGD GK  HPWMGCYGIG+TRVVA+AIEQNHD+ GIIWP+AIAPF +A+VPMNAHKSQRVRE SERL+  L
Sbjct:  168 ASLKDTYQKMYDAYVRIFTRLGLDFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSTESDYAANMEKAEALPAPLDSDARRAEPAEELRLVDTPNAKTIATLVEQHGLPIEKTIKTLMVHGHEGGLVALLVRGDHELNEVKAEHLEEVATPLTMASEEEIRAAVGAGPGSLGPVGLEMPIVIDRSVALMSDFGAGANVDGKHYFGINWERDVALPKVADLRNVVEGDPSPDGKGVLSIKRGIEVGHVFQLGRKYSEAMNATVLGDEGKAVHPWMGCYGIGITRVVASAIEQNHDQGGIIWPDAIAPFHIAIVPMNAHKSQRVRETSERLHDEL 501
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Match: U7P851_9GAMM (Proline--tRNA ligase n=25 Tax=Halomonas TaxID=2745 RepID=U7P851_9GAMM)

HSP 1 Score: 557 bits (1436), Expect = 3.520e-195
Identity = 286/333 (85.89%), Postives = 306/333 (91.89%), Query Frame = 1 
Query:    4 SLKQTYQDMYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNASDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNLPIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEEEIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINWERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAMNANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQVALVPMNAHKSQRVREESERLYQAL 1002
            SLK+TYQ MYDAY RIFTRLGL+FRPVIADNG+IGGTGSHEFHVLADSGEDDIVFS+ SDYAANMEKAEAL AP G    RA P+E LRLVDTPDA+TIAALV+Q  LPIEKT+KTLMVHA EGGLIALLVRGDHELNEVKAENL  VAAPLTMASEEEIRA VGAGPGSLGPV L+MP+IIDRSVALMSDFGAGAN++ KHYFGINWERDVALP VAD+RNVVEGDPSPDG+GTLSIKRGIEVGHVFQLG KYS+AMNA VLGD G+  HPWMGCYGIGVTRVVAAAIEQNHD++GIIWP+ IAPFQVALVPMNAHKSQRVREESE+LY AL
Sbjct:  169 SLKETYQAMYDAYVRIFTRLGLDFRPVIADNGAIGGTGSHEFHVLADSGEDDIVFSSESDYAANMEKAEAL-APQGE---RAAPAEELRLVDTPDARTIAALVEQHGLPIEKTIKTLMVHAAEGGLIALLVRGDHELNEVKAENLPEVAAPLTMASEEEIRAVVGAGPGSLGPVNLDMPIIIDRSVALMSDFGAGANIDGKHYFGINWERDVALPKVADIRNVVEGDPSPDGRGTLSIKRGIEVGHVFQLGTKYSEAMNATVLGDEGRALHPWMGCYGIGVTRVVAAAIEQNHDDAGIIWPDPIAPFQVALVPMNAHKSQRVREESEKLYAAL 497
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15147.2988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H0J3A5_9GAMM1.770e-21191.92Proline--tRNA ligase n=103 Tax=root TaxID=1 RepID=... [more]
A0A1M7EXH3_9GAMM3.550e-20688.02Proline--tRNA ligase n=1 Tax=Halomonas subglaciesc... [more]
A0A0P8B978_9GAMM3.590e-20488.32Proline--tRNA ligase n=4 Tax=unclassified Halomona... [more]
A0A7X4G0G1_9GAMM2.820e-20388.02Proline--tRNA ligase n=2 Tax=Halomonas TaxID=2745 ... [more]
UPI0005BDA5481.540e-19985.63proline--tRNA ligase n=1 Tax=Halomonas xinjiangens... [more]
A0A1G9Y987_9GAMM2.590e-19986.23Proline--tRNA ligase n=2 Tax=Halomonas TaxID=2745 ... [more]
UPI00037A7F346.030e-19985.63proline--tRNA ligase n=1 Tax=Halomonas jeotgali Ta... [more]
A0A7X3KRU9_9GAMM1.020e-19785.33Proline--tRNA ligase n=1 Tax=Halomonas zhuhanensis... [more]
A0A3N9U2E5_9GAMM3.380e-19684.43Proline--tRNA ligase n=10 Tax=Halomonadaceae TaxID... [more]
U7P851_9GAMM3.520e-19585.89Proline--tRNA ligase n=25 Tax=Halomonas TaxID=2745... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15147contigE-siliculosus-1a_F_contig15147:3..1004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size975
Model size1002
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
BiGG ReactioniJN678.proS,iUTI89_1310.UTI89_C0210
COG Functional cat.J
EC6.1.1.15
EggNOG OGs1MU7E@1224,1RN5R@1236,1XHB9@135619,COG0442@1,COG0442@2
EggNOG free text desc.Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GOsGO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
KEGG ModuleM00359,M00360
KEGG Pathwayko00970,map00970
KEGG ReactionR03661
KEGG koko:K01881
KEGG rclassRC00055,RC00523
Preferred nameproS
Seed eggNOG ortholog1504981.KO116_0139
Seed ortholog evalue6.2e-174
Seed ortholog score616.7
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928026.260949-CDS-E-siliculosus-1a_F_contig15147:2..9771622928026.260949-CDS-E-siliculosus-1a_F_contig15147:2..977Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15147 3..977 -
1696318777.3962326-CDS-E-siliculosus-1a_F_contig15147:2..9771696318777.3962326-CDS-E-siliculosus-1a_F_contig15147:2..977Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15147 3..977 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928026.3049452-UTR-E-siliculosus-1a_F_contig15147:977..10041622928026.3049452-UTR-E-siliculosus-1a_F_contig15147:977..1004Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig15147 978..1004 -
1696318777.409108-UTR-E-siliculosus-1a_F_contig15147:977..10041696318777.409108-UTR-E-siliculosus-1a_F_contig15147:977..1004Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig15147 978..1004 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15147.2988.1prot_E-siliculosus-1a_F_contig15147.2988.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15147 3..977 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15147.2988.1

>prot_E-siliculosus-1a_F_contig15147.2988.1 ID=prot_E-siliculosus-1a_F_contig15147.2988.1|Name=mRNA_E-siliculosus-1a_F_contig15147.2988.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=325bp
MYDAYTRIFTRLGLNFRPVIADNGSIGGTGSHEFHVLADSGEDDIVFSNA
SDYAANMEKAEALSAPLGSQATRADPSEALRLVDTPDAKTIAALVKQFNL
PIEKTVKTLMVHATEGGLIALLVRGDHELNEVKAENLAAVAAPLTMASEE
EIRAAVGAGPGSLGPVGLNMPVIIDRSVALMSDFGAGANVEDKHYFGINW
ERDVALPDVADLRNVVEGDPSPDGQGTLSIKRGIEVGHVFQLGQKYSQAM
NANVLGDNGKTSHPWMGCYGIGVTRVVAAAIEQNHDESGIIWPNAIAPFQ
VALVPMNAHKSQRVREESERLYQAL
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mRNA from alignment at E-siliculosus-1a_F_contig15147:3..1004-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15147.2988.1 ID=mRNA_E-siliculosus-1a_F_contig15147.2988.1|Name=mRNA_E-siliculosus-1a_F_contig15147.2988.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1002bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15147:3..1004- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCTTCACTAAAGCAAACCTACCAAGATATGTATGATGCCTACACGCGTAT
ATTCACGCGTTTAGGACTTAACTTTCGTCCCGTTATCGCCGACAACGGCT
CTATCGGTGGCACCGGCTCCCACGAATTCCACGTACTCGCGGACTCCGGT
GAAGACGATATCGTGTTCTCCAACGCTTCGGATTACGCGGCCAACATGGA
AAAAGCCGAAGCGCTGTCCGCACCGCTTGGCAGCCAAGCCACTCGCGCCG
ACCCCAGCGAAGCGCTGCGTTTGGTAGACACTCCTGATGCTAAAACCATC
GCGGCACTGGTTAAGCAGTTCAATCTTCCGATTGAAAAAACCGTGAAAAC
GCTGATGGTACATGCCACCGAGGGCGGTTTGATCGCCCTATTGGTGCGTG
GCGACCACGAGTTGAACGAAGTTAAAGCTGAAAACTTAGCTGCGGTTGCG
GCGCCGCTAACCATGGCCAGCGAAGAAGAAATTCGTGCCGCCGTTGGCGC
TGGCCCTGGCTCGCTTGGCCCGGTAGGTCTTAACATGCCGGTGATTATAG
ATCGTAGCGTGGCGCTAATGAGCGACTTTGGTGCAGGCGCCAATGTGGAG
GATAAGCACTATTTCGGCATTAACTGGGAGCGCGACGTTGCTTTACCCGA
CGTTGCTGATCTCCGCAATGTCGTGGAAGGCGATCCCTCTCCCGATGGCC
AAGGCACGCTGTCCATCAAGCGCGGCATTGAAGTCGGTCATGTCTTCCAG
CTCGGCCAAAAATACTCCCAAGCCATGAATGCCAACGTGTTGGGCGACAA
TGGTAAAACCAGCCATCCGTGGATGGGTTGCTATGGCATCGGCGTGACCC
GCGTGGTTGCAGCGGCGATAGAACAAAACCACGATGAGTCCGGTATTATT
TGGCCCAACGCTATTGCCCCCTTCCAGGTTGCGCTGGTGCCGATGAACGC
GCATAAATCCCAGCGTGTTCGCGAAGAGTCGGAGCGCCTCTACCAAGCAC
TT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15147:3..1004-

>mRNA_E-siliculosus-1a_F_contig15147.2988.1 ID=mRNA_E-siliculosus-1a_F_contig15147.2988.1|Name=mRNA_E-siliculosus-1a_F_contig15147.2988.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1950bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15147:3..1004- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTATGATGCCTACACGCGTATATTCACGCGTTTAGGACTTAACTTTCG
TCCCGTTATCGCCGACAACGGCTCTATCGGTGGCACCGGCTCCCACGAAT
TCCACGTACTCGCGGACTCCGGTGAAGACGATATCGTGTTCTCCAACGCT
TCGGATTACGCGGCCAACATGGAAAAAGCCGAAGCGCTGTCCGCACCGCT
TGGCAGCCAAGCCACTCGCGCCGACCCCAGCGAAGCGCTGCGTTTGGTAG
ACACTCCTGATGCTAAAACCATCGCGGCACTGGTTAAGCAGTTCAATCTT
CCGATTGAAAAAACCGTGAAAACGCTGATGGTACATGCCACCGAGGGCGG
TTTGATCGCCCTATTGGTGCGTGGCGACCACGAGTTGAACGAAGTTAAAG
CTGAAAACTTAGCTGCGGTTGCGGCGCCGCTAACCATGGCCAGCGAAGAA
GAAATTCGTGCCGCCGTTGGCGCTGGCCCTGGCTCGCTTGGCCCGGTAGG
TCTTAACATGCCGGTGATTATAGATCGTAGCGTGGCGCTAATGAGCGACT
TTGGTGCAGGCGCCAATGTGGAGGATAAGCACTATTTCGGCATTAACTGG
GAGCGCGACGTTGCTTTACCCGACGTTGCTGATCTCCGCAATGTCGTGGA
AGGCGATCCCTCTCCCGATGGCCAAGGCACGCTGTCCATCAAGCGCGGCA
TTGAAGTCGGTCATGTCTTCCAGCTCGGCCAAAAATACTCCCAAGCCATG
AATGCCAACGTGTTGGGCGACAATGGTAAAACCAGCCATCCGTGGATGGG
TTGCTATGGCATCGGCGTGACCCGCGTGGTTGCAGCGGCGATAGAACAAA
ACCACGATGAGTCCGGTATTATTTGGCCCAACGCTATTGCCCCCTTCCAG
GTTGCGCTGGTGCCGATGAACGCGCATAAATCCCAGCGTGTTCGCGAAGA
GTCGGAGCGCCTCTACCAAGCACTTATGTATGATGCCTACACGCGTATAT
TCACGCGTTTAGGACTTAACTTTCGTCCCGTTATCGCCGACAACGGCTCT
ATCGGTGGCACCGGCTCCCACGAATTCCACGTACTCGCGGACTCCGGTGA
AGACGATATCGTGTTCTCCAACGCTTCGGATTACGCGGCCAACATGGAAA
AAGCCGAAGCGCTGTCCGCACCGCTTGGCAGCCAAGCCACTCGCGCCGAC
CCCAGCGAAGCGCTGCGTTTGGTAGACACTCCTGATGCTAAAACCATCGC
GGCACTGGTTAAGCAGTTCAATCTTCCGATTGAAAAAACCGTGAAAACGC
TGATGGTACATGCCACCGAGGGCGGTTTGATCGCCCTATTGGTGCGTGGC
GACCACGAGTTGAACGAAGTTAAAGCTGAAAACTTAGCTGCGGTTGCGGC
GCCGCTAACCATGGCCAGCGAAGAAGAAATTCGTGCCGCCGTTGGCGCTG
GCCCTGGCTCGCTTGGCCCGGTAGGTCTTAACATGCCGGTGATTATAGAT
CGTAGCGTGGCGCTAATGAGCGACTTTGGTGCAGGCGCCAATGTGGAGGA
TAAGCACTATTTCGGCATTAACTGGGAGCGCGACGTTGCTTTACCCGACG
TTGCTGATCTCCGCAATGTCGTGGAAGGCGATCCCTCTCCCGATGGCCAA
GGCACGCTGTCCATCAAGCGCGGCATTGAAGTCGGTCATGTCTTCCAGCT
CGGCCAAAAATACTCCCAAGCCATGAATGCCAACGTGTTGGGCGACAATG
GTAAAACCAGCCATCCGTGGATGGGTTGCTATGGCATCGGCGTGACCCGC
GTGGTTGCAGCGGCGATAGAACAAAACCACGATGAGTCCGGTATTATTTG
GCCCAACGCTATTGCCCCCTTCCAGGTTGCGCTGGTGCCGATGAACGCGC
ATAAATCCCAGCGTGTTCGCGAAGAGTCGGAGCGCCTCTACCAAGCACTT
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