mRNA_E-siliculosus-1a_F_contig15137.2986.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15137.2986.1
Unique NamemRNA_E-siliculosus-1a_F_contig15137.2986.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: A0A5S3PTE8_9FLAO (MFS transporter n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PTE8_9FLAO)

HSP 1 Score: 540 bits (1390), Expect = 1.090e-190
Identity = 289/327 (88.38%), Postives = 314/327 (96.02%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SF  ASFL R GYKKAMLT LAIVF SCLLMIFGN+F YTK+LFM+IGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIA AYFLFPAFYSDTDEN+WLNVYYVLM+ IALSFLFLLFSKVEYEVE IGSN+KEDL+QSLKLI++PLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFS+ L+ QMAVIFALSLA+GRF+AGYLTK++SWVFLV+VCV+ISGGILLAVLPQL+VDV+A+ EISSL+DVP+LGFILPLIGLFIAPIYPLLNSTVLSSLPK+LHSPMSGLIIIFSALGGT+GSRIVGELFE+IGGANAFY
Sbjct:   57 SFFIASFLPRFGYKKAMLTGLAIVFASCLLMIFGNTFLYTKVLFMAIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIAAAYFLFPAFYSDTDENAWLNVYYVLMLLIALSFLFLLFSKVEYEVEVIGSNIKEDLIQSLKLILVPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSEALSVQMAVIFALSLAIGRFLAGYLTKKISWVFLVIVCVLISGGILLAVLPQLEVDVEALTEISSLADVPILGFILPLIGLFIAPIYPLLNSTVLSSLPKNLHSPMSGLIIIFSALGGTIGSRIVGELFENIGGANAFY 383          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: A0A520Z9J5_9FLAO (MFS transporter n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A520Z9J5_9FLAO)

HSP 1 Score: 534 bits (1375), Expect = 2.090e-188
Identity = 290/327 (88.69%), Postives = 308/327 (94.19%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SFL ASFL R GYKKAMLT LAIVF  CL MIFGN+F +TKILFMSIGVSFALIKLSVYSLIGIIT SKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDT+EN WLNVYYVLMV IA+SF+FLLFSKVEYEVEAIG+NLKEDLL SLKLI++PLVLVFLASAFFFVMIEQGIMTWLPRFNEKIF FS+ L+ QMAVIFALSLALGRFVAGYLTK+MSWVFLV+VCV+ISGGILLAVLPQLKVD +A+ EI++L DVP LG+ILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY
Sbjct:   57 SFLVASFLPRFGYKKAMLTGLAIVFFGCLYMIFGNTFFHTKILFMSIGVSFALIKLSVYSLIGIITHSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTNENGWLNVYYVLMVLIAVSFIFLLFSKVEYEVEAIGTNLKEDLLYSLKLIIVPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFMFSESLSVQMAVIFALSLALGRFVAGYLTKKMSWVFLVIVCVIISGGILLAVLPQLKVDAEALREITTLKDVPFLGYILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 383          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: A0A497CGW5_9BACT (MFS transporter n=2 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A497CGW5_9BACT)

HSP 1 Score: 511 bits (1315), Expect = 2.800e-179
Identity = 271/327 (82.87%), Postives = 306/327 (93.58%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SFL ASFL R GYKKAMLT LAIVF  CLLMI+GN+F YTKILF+SIG+SFALIKLSVYSLIG+IT S+KEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDEN+WLNVYYVL   I +SF+FLLFSK+EY+VEAIGSNLKED+L+SLKLI++PLVLVFLASAFFFVMIEQGIMTWLP FN+KIF+FS+ L+ QMA I ALSLALGRF+AGYLT+ +SW++LV++CV+ISG ILL+VLPQLKVDV+ +NEI+S++DVP LGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGT+GSRIVGELFES+GGANAFY
Sbjct:   57 SFLVASFLPRFGYKKAMLTGLAIVFFGCLLMIYGNTFFYTKILFLSIGISFALIKLSVYSLIGVITTSRKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENAWLNVYYVLSGLIVISFVFLLFSKIEYKVEAIGSNLKEDVLRSLKLIIVPLVLVFLASAFFFVMIEQGIMTWLPTFNQKIFNFSEQLSVQMASILALSLALGRFIAGYLTRFISWMYLVIICVIISGIILLSVLPQLKVDVELLNEITSITDVPTLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTIGSRIVGELFESVGGANAFY 383          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: A0A2M8AP87_9FLAO (MFS transporter n=1 Tax=Flavobacteriaceae bacterium CG_4_9_14_3_um_filter_33_16 TaxID=1973993 RepID=A0A2M8AP87_9FLAO)

HSP 1 Score: 503 bits (1295), Expect = 3.080e-176
Identity = 270/327 (82.57%), Postives = 300/327 (91.74%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SF+ ASFL R GYKKAML  LAIVF  CLLMIFGNSF YTKILF+SIG+SFALIKLSVYSLIGI+T +KKEHSSLMSSIEGFFMVGIA AYFLFPAFYSDTDEN+WLNVYY++   I +SF+FLLFSKVEYEVEAIGS+LKEDLL+S+KLIV+PLVLVFLASAFFFVMIEQGIMTWLPRFNEKIF FS  L+ QMA I ALSLALGRF+AGYL+K MSWV LV++C++ISG ILL+VLPQLKV++ ++ EI SL++VPMLGFILPLIGLFIAPIYPLLNSTVLSSLPK+LHSPMSGLIIIFSALGGT+GSRIVGELFESIGGA AFY
Sbjct:   57 SFIIASFLPRFGYKKAMLVGLAIVFFGCLLMIFGNSFAYTKILFLSIGISFALIKLSVYSLIGIVTSTKKEHSSLMSSIEGFFMVGIASAYFLFPAFYSDTDENAWLNVYYLISALIVVSFVFLLFSKVEYEVEAIGSSLKEDLLRSIKLIVVPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFKFSATLSVQMASILALSLALGRFLAGYLSKFMSWVTLVIICIIISGIILLSVLPQLKVEIDSLVEIKSLTEVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKNLHSPMSGLIIIFSALGGTIGSRIVGELFESIGGAKAFY 383          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: A0A3M7KQJ0_9FLAO (MFS transporter n=1 Tax=Flavobacteriaceae bacterium PRS1 TaxID=2483459 RepID=A0A3M7KQJ0_9FLAO)

HSP 1 Score: 497 bits (1279), Expect = 8.350e-174
Identity = 265/327 (81.04%), Postives = 301/327 (92.05%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SFL ASFL RLGYKKAML AL IVF  CL MIFGN+F YTKILF+++GVSFALIKLSVYSLIGI+T SKKEH+S+MSSIEGFFMVGIALAYFLFPAFYSDT+ N+WLNVYYV+   I +SF+FLLFSK+EY VE IGSNLKEDLL+S+KLI+IPLVLVFLASAFFFVMIEQGIMTWLP FNEKIF+FS+ L+ QMA I ALSLALGRF+AGYLT+ +SW++LV++CV+ISG ILL+VLPQLKVDV+++N I+ ++DVP LGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGT+GSRI+GELFESIGGANAFY
Sbjct:   57 SFLIASFLPRLGYKKAMLIALVIVFFGCLQMIFGNTFLYTKILFLTVGVSFALIKLSVYSLIGIVTSSKKEHASMMSSIEGFFMVGIALAYFLFPAFYSDTNVNAWLNVYYVICGLIVISFVFLLFSKIEYTVEVIGSNLKEDLLKSIKLIIIPLVLVFLASAFFFVMIEQGIMTWLPTFNEKIFNFSEQLSVQMASILALSLALGRFIAGYLTRFISWMYLVIICVIISGIILLSVLPQLKVDVESLNGITRITDVPTLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTIGSRIIGELFESIGGANAFY 383          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: A0A1A7R3A0_9FLAO (Fucose permease n=1 Tax=Gelidibacter algens TaxID=49280 RepID=A0A1A7R3A0_9FLAO)

HSP 1 Score: 496 bits (1277), Expect = 1.570e-173
Identity = 271/327 (82.87%), Postives = 297/327 (90.83%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SFL ASFL R GYK AMLT LAIVF  CLLM++GN+F YTKILFMSIGVSFALIKLSVYSLIGIIT+SK EH+SLMSSIEGFFMVGIA AY LFP FYS+ DENSWLNVYYVL   I LSFLFLLFSK+EY+VEAIGS+LKEDL  S KL+V+PLVLVF+ SAF FVMIEQGIMTWLPRFNEKIF FS+ L+ QMA+IFALSLALGRFVAGYLTK+MSWV+LV+VC+VISGGILL VLPQL+ + ++M EI+SLS VP+LGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGT+GSRIVGELFESIGGANAFY
Sbjct:   57 SFLVASFLPRFGYKNAMLTGLAIVFFGCLLMVYGNTFAYTKILFMSIGVSFALIKLSVYSLIGIITESKSEHASLMSSIEGFFMVGIAFAYILFPFFYSE-DENSWLNVYYVLCGLILLSFLFLLFSKIEYQVEAIGSSLKEDLKASAKLMVVPLVLVFIISAFLFVMIEQGIMTWLPRFNEKIFLFSEKLSVQMAIIFALSLALGRFVAGYLTKRMSWVYLVIVCIVISGGILLVVLPQLEGNSESMGEITSLSGVPLLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTIGSRIVGELFESIGGANAFY 382          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: A0A1M6E758_9FLAO (Fucose permease n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A1M6E758_9FLAO)

HSP 1 Score: 493 bits (1270), Expect = 1.750e-172
Identity = 268/329 (81.46%), Postives = 301/329 (91.49%), Query Frame = 1
Query:    1 LASFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            L SFL ASFL R GYKKAML ALAIVF  CL MIFGNSF YTK+LF++IGVSFALIKLSVYSLIGI+T SKKEH+SLMSSIEGFFMVGIALAYFLFPAFYS+ DENSWLNVYY+L   I LSF+FLLFSKVEYEVEAIGS+LK+DL++S+KLI++PLVLVF+ SAF FVMIEQGIMTWLP FN+KIF+F+ VL+ QMA I AL+LALGRF+AG+LTK ++WV LVVVCVVISGGIL+ +LPQL+ DV+A+ EI+SLSDVP LGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGT+GSRIVGELFES+GGANAFY
Sbjct:   55 LVSFLIASFLPRFGYKKAMLVALAIVFFGCLQMIFGNSFFYTKVLFLTIGVSFALIKLSVYSLIGILTSSKKEHASLMSSIEGFFMVGIALAYFLFPAFYSE-DENSWLNVYYLLCGLITLSFVFLLFSKVEYEVEAIGSSLKDDLMESIKLIIVPLVLVFIISAFLFVMIEQGIMTWLPTFNKKIFNFNSVLSVQMASILALTLALGRFIAGFLTKYINWVVLVVVCVVISGGILIYILPQLQGDVEAIGEITSLSDVPTLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTIGSRIVGELFESVGGANAFY 382          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: UPI00142317CF (MFS transporter n=1 Tax=Yeosuana marina TaxID=1565536 RepID=UPI00142317CF)

HSP 1 Score: 493 bits (1270), Expect = 1.750e-172
Identity = 265/327 (81.04%), Postives = 299/327 (91.44%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SFL ASFL R GYKKAML  L +VF  CL+MIFGNSF YTKILF+SIG+SFALIKLSVYSLIGI+T++KKEHSSLMSSIEGFFMVGIA+AY LFPAFYSD DENSWLNVYY+L   I +SF+FLLFSK+EY+VEAIGS+LKEDL++S+KL+VIPLVLVF+ SAF FVMIEQGIMTWLPRFNEKIF FS+ L+ +MA+IFALSLALGRFVAGYLTK+MSWV+LV++C+VISG ILL VLPQL VDV  + +I S++DVP+LGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGT+GSRIVGELFESIGGA AFY
Sbjct:   57 SFLIASFLPRFGYKKAMLGGLVLVFFGCLVMIFGNSFVYTKILFLSIGISFALIKLSVYSLIGIVTETKKEHSSLMSSIEGFFMVGIAVAYMLFPAFYSD-DENSWLNVYYLLCGLILISFIFLLFSKIEYKVEAIGSSLKEDLMESVKLMVIPLVLVFIISAFLFVMIEQGIMTWLPRFNEKIFLFSEKLSVRMAIIFALSLALGRFVAGYLTKRMSWVYLVIICIVISGAILLIVLPQLNVDVNTLAKIESIADVPLLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTIGSRIVGELFESIGGAKAFY 382          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: UPI001111148D (MFS transporter n=1 Tax=Algibacter aestuarii TaxID=912802 RepID=UPI001111148D)

HSP 1 Score: 485 bits (1248), Expect = 4.160e-169
Identity = 261/327 (79.82%), Postives = 299/327 (91.44%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SF+ ASFL R GYKKAML ALAIVF  CL M++GNSF YTK+LF+SIGVSFALIKLSVYSLIGI+T++KKEH+SLMSSIEGFFMVGIALAYFLFPAFYS+ DENSWLNVYY+L   I LSFLFLLFSKVEY+VEAIG++LK+DL +SLKL+++PLVLVF+ SAF FVMIEQGIMTWLP FN+KIF+F+ VL+ QMA I ALSLA GRF+AG+LTK M+WV LV++CVVISGGIL+ +LPQL+ D+Q++ EISSLSDVP LGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGT+GSRIVGELFES+GGA+AFY
Sbjct:   57 SFIIASFLPRFGYKKAMLAALAIVFFGCLQMVYGNSFFYTKVLFLSIGVSFALIKLSVYSLIGILTETKKEHASLMSSIEGFFMVGIALAYFLFPAFYSE-DENSWLNVYYLLCGLIFLSFLFLLFSKVEYKVEAIGTSLKDDLKESLKLMIVPLVLVFIISAFLFVMIEQGIMTWLPTFNKKIFNFNSVLSVQMASILALSLAFGRFIAGFLTKFMNWVVLVIICVVISGGILVYILPQLQGDIQSVGEISSLSDVPWLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTIGSRIVGELFESVGGASAFY 382          
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Match: A0A1K2IKG1_9FLAO (Fucose permease n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A1K2IKG1_9FLAO)

HSP 1 Score: 483 bits (1244), Expect = 1.690e-168
Identity = 261/327 (79.82%), Postives = 299/327 (91.44%), Query Frame = 1
Query:    7 SFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIGVSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFYSDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSLKLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVIFALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAMNEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTLGSRIVGELFESIGGANAFY 987
            SF+ ASFL R GYKKAMLTALAIVF  CL M+FGN+F +TK+LF+SIGVSFALIKLSVYSLIGI+TDSKKEH+SLMSSIEGFFMVGIALAYFLFPAFYS  DENSWLNVYY+L   I +SF+FLLFSKVEYEVEAIGS+LK+DL +S+KL+V+PLVL+F+ SAF FVMIEQGIMTWLP FN+KIF+F+ VL+ QMA I ALSLALGRF+AG+LTK ++WV LVVVCVVISG IL+ +LPQL+ D++++ EI+SLS+VP LGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGT+GSRIVGELFESIGGA+AFY
Sbjct:   57 SFIIASFLPRFGYKKAMLTALAIVFVGCLYMVFGNTFFHTKVLFLSIGVSFALIKLSVYSLIGILTDSKKEHASLMSSIEGFFMVGIALAYFLFPAFYSS-DENSWLNVYYLLCGLILISFVFLLFSKVEYEVEAIGSSLKDDLKESVKLMVVPLVLIFIISAFLFVMIEQGIMTWLPTFNKKIFNFNSVLSVQMASILALSLALGRFIAGFLTKYINWVVLVVVCVVISGSILIYILPQLQGDIESVGEITSLSEVPTLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLIIIFSALGGTIGSRIVGELFESIGGASAFY 382          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15137.2986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5S3PTE8_9FLAO1.090e-19088.38MFS transporter n=1 Tax=Maribacter algarum TaxID=2... [more]
A0A520Z9J5_9FLAO2.090e-18888.69MFS transporter n=3 Tax=Flavobacteriaceae bacteriu... [more]
A0A497CGW5_9BACT2.800e-17982.87MFS transporter n=2 Tax=Bacteroidetes bacterium Ta... [more]
A0A2M8AP87_9FLAO3.080e-17682.57MFS transporter n=1 Tax=Flavobacteriaceae bacteriu... [more]
A0A3M7KQJ0_9FLAO8.350e-17481.04MFS transporter n=1 Tax=Flavobacteriaceae bacteriu... [more]
A0A1A7R3A0_9FLAO1.570e-17382.87Fucose permease n=1 Tax=Gelidibacter algens TaxID=... [more]
A0A1M6E758_9FLAO1.750e-17281.46Fucose permease n=3 Tax=Flavobacteriaceae TaxID=49... [more]
UPI00142317CF1.750e-17281.04MFS transporter n=1 Tax=Yeosuana marina TaxID=1565... [more]
UPI001111148D4.160e-16979.82MFS transporter n=1 Tax=Algibacter aestuarii TaxID... [more]
A0A1K2IKG1_9FLAO1.690e-16879.82Fucose permease n=3 Tax=Flavobacteriaceae TaxID=49... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15137contigE-siliculosus-1a_F_contig15137:6..992 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size987
Model size987
Exons1
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelFlavobacteriia
COG Functional cat.G
EggNOG OGs1I0HK@117743,4NHI6@976,COG0738@1,COG0738@2
EggNOG free text desc.MFS transporter
Seed eggNOG ortholog1178825.ALIH01000002_gene1108
Seed ortholog evalue2.1e-137
Seed ortholog score495.4
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928026.1404681-CDS-E-siliculosus-1a_F_contig15137:5..9921622928026.1404681-CDS-E-siliculosus-1a_F_contig15137:5..992Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15137 6..992 +
1696318777.3561015-CDS-E-siliculosus-1a_F_contig15137:5..9921696318777.3561015-CDS-E-siliculosus-1a_F_contig15137:5..992Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15137 6..992 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15137.2986.1prot_E-siliculosus-1a_F_contig15137.2986.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15137 6..992 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15137.2986.1

>prot_E-siliculosus-1a_F_contig15137.2986.1 ID=prot_E-siliculosus-1a_F_contig15137.2986.1|Name=mRNA_E-siliculosus-1a_F_contig15137.2986.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=329bp
LASFLGASFLSRLGYKKAMLTALAIVFGSCLLMIFGNSFGYTKILFMSIG
VSFALIKLSVYSLIGIITDSKKEHSSLMSSIEGFFMVGIALAYFLFPAFY
SDTDENSWLNVYYVLMVFIALSFLFLLFSKVEYEVEAIGSNLKEDLLQSL
KLIVIPLVLVFLASAFFFVMIEQGIMTWLPRFNEKIFSFSDVLATQMAVI
FALSLALGRFVAGYLTKQMSWVFLVVVCVVISGGILLAVLPQLKVDVQAM
NEISSLSDVPMLGFILPLIGLFIAPIYPLLNSTVLSSLPKSLHSPMSGLI
IIFSALGGTLGSRIVGELFESIGGANAFY
back to top

mRNA from alignment at E-siliculosus-1a_F_contig15137:6..992+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15137.2986.1 ID=mRNA_E-siliculosus-1a_F_contig15137.2986.1|Name=mRNA_E-siliculosus-1a_F_contig15137.2986.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=987bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15137:6..992+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCGCTTCATTCTTAGGGGCTTCATTTCTTTCTAGACTGGGATATAAAAA AGCAATGCTTACGGCCTTGGCAATTGTTTTTGGAAGTTGTCTGTTAATGA TTTTTGGAAATTCATTTGGGTATACTAAAATTCTCTTTATGTCTATTGGG GTTAGTTTTGCGCTGATCAAACTATCCGTTTATTCGTTGATAGGAATTAT CACAGATTCTAAAAAAGAGCATTCCTCACTTATGAGTTCTATCGAGGGCT TTTTTATGGTAGGAATTGCTTTAGCATATTTTTTGTTTCCTGCTTTTTAT TCTGACACCGATGAGAATTCATGGTTAAATGTCTACTATGTTTTAATGGT ATTTATCGCTCTTTCGTTCCTCTTTTTACTGTTTTCTAAAGTCGAATATG AAGTAGAGGCGATTGGTTCTAATCTTAAAGAAGATCTTCTGCAATCCTTA AAATTAATAGTAATTCCATTGGTTTTAGTGTTTTTGGCTTCGGCTTTTTT CTTTGTAATGATCGAGCAGGGTATTATGACTTGGCTACCAAGATTCAATG AAAAGATTTTTAGTTTTAGCGATGTTTTAGCCACGCAGATGGCGGTAATT TTCGCCTTGTCGCTAGCCTTAGGGCGTTTTGTTGCAGGCTACCTTACAAA ACAAATGTCTTGGGTATTCTTAGTTGTTGTTTGTGTAGTTATATCTGGCG GAATACTACTTGCTGTATTACCGCAACTCAAAGTAGATGTTCAAGCTATG AATGAAATTTCAAGTCTGTCTGATGTTCCAATGCTTGGTTTTATTCTACC ACTCATCGGTCTTTTTATTGCTCCGATATATCCATTGTTGAATTCTACAG TATTAAGTTCGCTTCCCAAGAGTTTGCATTCCCCTATGTCTGGTCTAATA ATCATTTTTTCAGCATTAGGCGGTACTTTGGGCTCTCGAATTGTAGGTGA ATTATTTGAAAGTATTGGCGGTGCGAATGCTTTCTAT
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15137:6..992+

>mRNA_E-siliculosus-1a_F_contig15137.2986.1 ID=mRNA_E-siliculosus-1a_F_contig15137.2986.1|Name=mRNA_E-siliculosus-1a_F_contig15137.2986.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1974bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15137:6..992+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCGCTTCATTCTTAGGGGCTTCATTTCTTTCTAGACTGGGATATAAAAA
AGCAATGCTTACGGCCTTGGCAATTGTTTTTGGAAGTTGTCTGTTAATGA
TTTTTGGAAATTCATTTGGGTATACTAAAATTCTCTTTATGTCTATTGGG
GTTAGTTTTGCGCTGATCAAACTATCCGTTTATTCGTTGATAGGAATTAT
CACAGATTCTAAAAAAGAGCATTCCTCACTTATGAGTTCTATCGAGGGCT
TTTTTATGGTAGGAATTGCTTTAGCATATTTTTTGTTTCCTGCTTTTTAT
TCTGACACCGATGAGAATTCATGGTTAAATGTCTACTATGTTTTAATGGT
ATTTATCGCTCTTTCGTTCCTCTTTTTACTGTTTTCTAAAGTCGAATATG
AAGTAGAGGCGATTGGTTCTAATCTTAAAGAAGATCTTCTGCAATCCTTA
AAATTAATAGTAATTCCATTGGTTTTAGTGTTTTTGGCTTCGGCTTTTTT
CTTTGTAATGATCGAGCAGGGTATTATGACTTGGCTACCAAGATTCAATG
AAAAGATTTTTAGTTTTAGCGATGTTTTAGCCACGCAGATGGCGGTAATT
TTCGCCTTGTCGCTAGCCTTAGGGCGTTTTGTTGCAGGCTACCTTACAAA
ACAAATGTCTTGGGTATTCTTAGTTGTTGTTTGTGTAGTTATATCTGGCG
GAATACTACTTGCTGTATTACCGCAACTCAAAGTAGATGTTCAAGCTATG
AATGAAATTTCAAGTCTGTCTGATGTTCCAATGCTTGGTTTTATTCTACC
ACTCATCGGTCTTTTTATTGCTCCGATATATCCATTGTTGAATTCTACAG
TATTAAGTTCGCTTCCCAAGAGTTTGCATTCCCCTATGTCTGGTCTAATA
ATCATTTTTTCAGCATTAGGCGGTACTTTGGGCTCTCGAATTGTAGGTGA
ATTATTTGAAAGTATTGGCGGTGCGAATGCTTTCTATCTCGCTTCATTCT
TAGGGGCTTCATTTCTTTCTAGACTGGGATATAAAAAAGCAATGCTTACG
GCCTTGGCAATTGTTTTTGGAAGTTGTCTGTTAATGATTTTTGGAAATTC
ATTTGGGTATACTAAAATTCTCTTTATGTCTATTGGGGTTAGTTTTGCGC
TGATCAAACTATCCGTTTATTCGTTGATAGGAATTATCACAGATTCTAAA
AAAGAGCATTCCTCACTTATGAGTTCTATCGAGGGCTTTTTTATGGTAGG
AATTGCTTTAGCATATTTTTTGTTTCCTGCTTTTTATTCTGACACCGATG
AGAATTCATGGTTAAATGTCTACTATGTTTTAATGGTATTTATCGCTCTT
TCGTTCCTCTTTTTACTGTTTTCTAAAGTCGAATATGAAGTAGAGGCGAT
TGGTTCTAATCTTAAAGAAGATCTTCTGCAATCCTTAAAATTAATAGTAA
TTCCATTGGTTTTAGTGTTTTTGGCTTCGGCTTTTTTCTTTGTAATGATC
GAGCAGGGTATTATGACTTGGCTACCAAGATTCAATGAAAAGATTTTTAG
TTTTAGCGATGTTTTAGCCACGCAGATGGCGGTAATTTTCGCCTTGTCGC
TAGCCTTAGGGCGTTTTGTTGCAGGCTACCTTACAAAACAAATGTCTTGG
GTATTCTTAGTTGTTGTTTGTGTAGTTATATCTGGCGGAATACTACTTGC
TGTATTACCGCAACTCAAAGTAGATGTTCAAGCTATGAATGAAATTTCAA
GTCTGTCTGATGTTCCAATGCTTGGTTTTATTCTACCACTCATCGGTCTT
TTTATTGCTCCGATATATCCATTGTTGAATTCTACAGTATTAAGTTCGCT
TCCCAAGAGTTTGCATTCCCCTATGTCTGGTCTAATAATCATTTTTTCAG
CATTAGGCGGTACTTTGGGCTCTCGAATTGTAGGTGAATTATTTGAAAGT
ATTGGCGGTGCGAATGCTTTCTAT
back to top