mRNA_E-siliculosus-1a_F_contig1513.2984.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 929 bits (2402), Expect = 0.000e+0 Identity = 491/530 (92.64%), Postives = 501/530 (94.53%), Query Frame = 1
Query: 394 RSAHLVMVEGVCVLLTMVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYEQRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDVGKVPGKDELTTAGGDGDVGNVVASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVRMQRENVQTMMDSPPLQAGVAAA 1983
RSAHLVMVEGVCVLLTMVVA+NGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYM VLLV SVGMMAIP+YQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKEL LVTVAIVCLAVVQK AEWGGVYEQRWVG+NISIFIAAVLFGISIVDPLRRLA+DPLAATKRNYADRVLLSRT PDSTVRTASGVSSGRSRD SRIRA+SEEE RLEEGD+G V KDE TTAG DV NVVASAV+GNGVI TST DTN AVAAGTWNEREPINTSV TKQSSSVSNDTSIGGNRRDVV+RG RER FRGRRGGG RGRPEREEMEVWNFERLARTPLLAVAFEDY KRALCHESVLFLTEVSRYQHEDYATPTKD RSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEE+RRLIFGRAYLEVKSMLEANLLRRFLNTDRF+SVRMQRENVQTMMDSPPL AGVAAA
Sbjct: 3 RSAHLVMVEGVCVLLTMVVAVNGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVGNNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTAG---DVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSPPLPAGVAAA 529
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 744 bits (1922), Expect = 1.550e-253 Identity = 428/624 (68.59%), Postives = 493/624 (79.01%), Query Frame = 1
Query: 124 SSIDVGGSSSGGAXXXXXXXXXXXGTGSSSYWEQ--RFGDGDFDPSSFIPSYTRTDKALAHFRLVVGCCFIVLGSYALVRFYRSRWILDIRTRSAHLVMVEGVCVLLTMVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYEQRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDVGKVPGKDELTTAG-GDGDVGNVV-ASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVRMQRENVQTMMDSPPLQAGVAAA 1983
SS+D G SSS A XXXXXXXXXX SSSYW ++ DGDFDPS PSY RTDKALA RL +GCCFIVLG+YALVRFYRSRWILDIRTRSAHLV ++GV +LL+M+V +NG+ +VWDSGLDWFW+SLLLFF+SPAL GSYICRALRLAVVF+PRAK ALPWLIPERNY+AVLL+AS+G++AIP+Y EYTLEVW+ IPKQT+IL +A V AV L CIYPFIRNVDDLFNIS EL VTV IV + +VQ+ +WGG +EQRW+ SNIS+ AVLF ISIV PLRRLALDPLAATKRNYADRVLLSRTE ST R+ASG+S R+ SSRI DS++EV E+ ++G VPG D AG G G G V +SAV+G+GVI TST D N VA TW RE + S+SV + G RRD V+RGQR RG XX +REEMEVW+FERL RTPLLA AFEDY KRALCHESVLFL+EVSRYQ++DYATPT + + P+QFGTFCYIT+TFIKAG+PEEVNISD D+K ILELYQKGEE FE+VNEE+RR++F R+YLEVKSMLEANLLRRFLNTD+F+SVR QRENVQ MMDSPPL AGVAAA
Sbjct: 6 SSVDTGASSSS-AGXXXXXXXXXXXXXSSSYWADLDKYADGDFDPSDLFPSYNRTDKALALVRLGLGCCFIVLGTYALVRFYRSRWILDIRTRSAHLVTLQGVSLLLSMLVTVNGATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWLTSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHST-RSASGISPERAGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADAN-VVAPRTWKGREM----TIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXP-SDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPT-NAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVAAA 620
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 713 bits (1841), Expect = 1.620e-241 Identity = 393/599 (65.61%), Postives = 456/599 (76.13%), Query Frame = 1
Query: 196 GTGSSSYWEQRFGDGDFDP--SSFIPSYTRTDKALAHFRLVVGCCFIVLGSYALVRFYRSRWILDIRTRSAHLVMVEGVCVLLTMVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYEQRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDVGKVPGKDELTTAGGDGDVGNVVASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVRMQRENVQTMMDSPPLQAGVAAA 1983
G G+SS WEQ + DGD D SS PSYTRTDKALA RL VGCCFIVLG+ ALVRFYRS+WILDIRTRSA+LVMV GV +LTM+V +N S VVWD G DWFW+SLLLFFISPAL GSYICRALRLAVVFHPR KRALPWLIPE NYM VLLVASVGM+AIP+Y EYTL VW+ I KQT IL EA V AV LACIYPFIRNVDDLF+IS EL +VT IV L ++ +W G YE+RW +N+S+ +LFG+SI+ PLRRLA DPLAAT+ NYA+RVL +RTEP ST R ASG SSG +SS + ++ E+E LEEG +G+ TT G G V ASA IG V TS+ D NGAVA TW +REP N+SV+T + VSND GGNR D VRRGQ E G RGR GG R R ++++++W+FER+ RTPLLAVAFEDY K+ALCHES LFL+EVSRYQ+ DYA T+ + SS P+QFGTFCYIT+TFIKAGSPEEVNISD ++K IL LY KGEE FEDVNEE+RR+IF RAYL VK MLEANLL RFLNTDRF+SV MQ+E+ Q M+DSP LQAGVA +
Sbjct: 18 GAGTSSSWEQHYDDGDIDLNLSSLAPSYTRTDKALALVRLGVGCCFIVLGTCALVRFYRSKWILDIRTRSAYLVMVGGVAGILTMLVTVNDSTTVVWDIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIV-LITSEEVDGQWWGPYERRWFANNMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPNRTEPHSTARRASGFSSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREGGSAGYVAASATIGKAV-TTSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGG--RRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSPHLQAGVAVS 612
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 601 bits (1550), Expect = 1.190e-199 Identity = 337/591 (57.02%), Postives = 390/591 (65.99%), Query Frame = 1
Query: 196 GTGSSSYWEQRFGDGDFDP--SSFIPSYTRTDKALAHFRLVVGCCFIVLGSYALVRFYRSRWILDIRTRSAHLVMVEGVCVLLTMVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYEQRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDVGKVPGKDELTTAGGDGDVGNVVASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVRMQRENVQTMMDSPP 1959
G G+S+ WEQ +GDGD D SS +PSYTRTDKALA FRL VGCCFIVLG+ AL RFYR + ILDIRTRSA+LVMV GV +LTM+V +N + V+WD+G DWFW SL LFFISPAL G YICRALRLAVVFHPR KRALPWLIPERNYM VLLVASVGM+AIP+Y E+TL VW+ I KQTTIL EA V AV LACIYPFIRNVDDLF+IS EL +VT I + +VQ+ WGG YE+RW+ +N+S+ VLFG+SIV PLRRLA DP AAT+RNYA+RVL TEP S IGGNR D VRRGQ ERG RGR GG R R ++++++W+FER+ RTPLLAVAFEDY KRALCHES LFL+EVSRYQ+ DYAT + + SS P+QFGTFCYIT+TFIKAGSPEEVNISD ++K IL LY KGEE FEDVN+ +RR+IF RAYL VK MLEANLL RFLNTDRF+S+ MQ+EN Q M+DSPP
Sbjct: 18 GPGTSTSWEQHYGDGDIDLDLSSLVPSYTRTDKALALFRLGVGCCFIVLGTCALARFYRLKQILDIRTRSAYLVMVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLITIVQEIDGLWGGCYERRWLANNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEPHS---------------------------------------------------------------------------------------------------------IGGNRLDAVRRGQSERGDDRGRDGG--RRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPP 501
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 594 bits (1532), Expect = 2.160e-196 Identity = 347/543 (63.90%), Postives = 403/543 (74.22%), Query Frame = 1
Query: 394 RSAHLVMVEGVCVLLTMVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYEQRWVGSNISIFIAAV------------LFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDVGKVPGKDELTTAG-GDGDVGNVVASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVRMQRENVQTMMDSPPLQAGVAAA 1983
RSAHLV ++GV +L +M+V +N + +VWDSGLDWFW+SLLLFF+SPAL GSYICRALRLAVVF+PRAKRALPWLIPERNY+AVLL+AS+G++AIP+YQEYTLEVW+ IPKQT+IL T+A V AV L CIYPFIRNVDDLFNISKEL VTV I AVV T V+ V S + + L S+V PLRRLALDPLAATKRNYADRVLLSRTE ST R+ASG+S R+ SSRI DSE+EV E+ ++G VPG D AG G G G V SAV+G+GVI TS+ D NGAVA W RE + S+SV +S G RRD V+RGQR RG XX +REEMEVW+FERL RTPLLA AFEDY KRALCHESVLFL+EVSRYQ++DYATPT + P+QFGTFC+IT+TFIKAG+PEEVNI +K ILELYQKGEE FE+VNEE+RR++F R+YL VKSMLEANLLRRFLNTD+F+SVR QRENVQ MMDSPPL AGV AA
Sbjct: 19 RSAHLVTLQGVSLLFSMLVTVNDATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKELITVTVTI---AVV--TCEAHSFVHRSTHVESCLQQHVPPTTKRFPYPMSPSNLSTRSVVAPLRRLALDPLAATKRNYADRVLLSRTESHST-RSASGISPERAGGSSRIVDDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGREL----TIANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXX-SDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVVAA 546
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 531 bits (1369), Expect = 2.340e-173 Identity = 308/527 (58.44%), Postives = 358/527 (67.93%), Query Frame = 1
Query: 394 RSAHLVMVEGVCVLLTMVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYEQRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDVGKVPGKDELTTAGGDGDVGNVVASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPS-QFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVRMQRENVQTMMDSPPLQAG 1971
RSA+LVMVEGVC LLTM+V +N SINVVWD GLD+FW+SLLLF + P L GSYICR LRLAVVFHPRAKRALPWLIP G Y + L FAV LAC +PFIRNVDDLF+ISKE+ +VT A+V LA+ Q +WGGVYE+RW+ ++SI AVLFG+SIVDPLRRLA DPLAAT+ N+A+R+LLSRTEP ++VR G SS S R R DSEEE RLEEG VPGKD T AGGDGD G+V SA IG G T D +GAVA TWNEREP N+SV+ + SSSVSND S G RR +R QR RGS R R G R R +REEMEVW+FER+A TPLLA AFEDY KRALCHESVLFL+EVSRYQ+ +Y PT+ + SSP QFG+FCYIT+TFIKAGS EEVNI R+IF RAY +VK+MLEANL+ RFLNTDRF++VR+QREN++ MM SPP Q G
Sbjct: 3 RSAYLVMVEGVCALLTMLVTLNSSINVVWDCGLDYFWVSLLLFLVVPTLLGSYICRVLRLAVVFHPRAKRALPWLIPG------------GRSDAGYYPDDDLSA-----------------FAVALACTFPFIRNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVYERRWIDKSVSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSVRRELGFSSVIGGGSQRTRGDSEEEARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRG-RRGAFQRVQRARGSGRDR--GCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSPPPQEG 470
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 422 bits (1085), Expect = 3.220e-133 Identity = 257/517 (49.71%), Postives = 297/517 (57.45%), Query Frame = 1
Query: 412 MVEGVCVLLTMVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYEQRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDVGKVPGKDELTTAGGDGDVGNVVASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVRMQRENVQTMMDSPP 1959
MV GV +LTM+V +N + V+WD+G DWFW SLLLFFISPAL GSYICRALRLAVVFHPR KRALPWL+PERNYM VLLV+SVGM+AIP+Y E+TL VW+ I KQTTIL EA V AV LACIYPFIRNVDDLF+IS EL +VT I G+ + T+RNYA+RVL TEP S IGGNR D VRRGQ ERG RGR GG R R ++++++W+FER+ RTPLLAVAFEDY KRALCHES LFL+EVSRYQ+ DYAT + + SS P+QFGTFCYIT+TFIKAGS EEVNISD ++K IL LY KGEE FEDVN E+RR+IF RAYL VK MLEANLL RFLNTDRF+S+ MQ+EN Q M+DSPP
Sbjct: 1 MVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLVPERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATI-----------------------------------GL-------------ITTTRRNYANRVLPDHTEPHS---------------------------------------------------------------------------------------------------------IGGNRLDAVRRGQTERGDDRGRDGG--RRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPP 362
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE) HSP 1 Score: 347 bits (891), Expect = 7.000e-102 Identity = 262/612 (42.81%), Postives = 305/612 (49.84%), Query Frame = 1
Query: 394 RSAHLVMVEGVCVLLTMVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLA----------------------------------------------------------------------------VVQKTTAEWGGVYEQRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDVGKVPGKDELTTAGGDGDVGNVVASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPE-----REEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVRMQRENVQTMMDSPP-LQAGVAA 1980
RSAHL M+ GV V+L M+ A+NG++N+VWDSGLDWFW+SLLLFF+SPAL GS ICRALRLAVVFH RAKRALPWLIP T IL E++ FAV ACIYPFIRNVDDLF+ISKEL +VT A + LA V QK + GGV E+RW+G+N+ +F AAV+F + +D LEEG + G+ D D G +A T D +GA AA L + SS+S+ S GGNRRD ++RGQR S G G XX R MEVW+FERLARTPLLAVAFEDY KRALCHESVLFL+EVS YQ++DYAT T+ + SS P+QFGT CYIT+TF KAGSPEEVN SDADKK I E N+ F AYL+VKSMLEANLLRRFLNTDRF+SVRMQRENVQ MMDSPP L AGV A
Sbjct: 133 RSAHLAMLGGVAVILWMLTAVNGALNIVWDSGLDWFWISLLLFFVSPALFGSCICRALRLAVVFHSRAKRALPWLIP-----------------------------------TDILIWESIAFAVVQACIYPFIRNVDDLFSISKELAIVTAATILLAGGPRMPDSAAALAPLDEYQYPAVGASSRASALTSRFARTPTTLHPSVLNPPPPVGTPSPPSPLHAALVLDALAAPPVGQKLEGDCGGVNERRWLGNNLFLFFAAVVFSVEC-------GIDDXXXXXXXXM----------------------------------------LEEG-APRGNGRKNPAIVPADDDTG------------MAAVTGDDDGATAAXXGXXXXAAPARGLARGISSLSSH-STGGNRRDALQRGQRN--STCGHGGXXXXXXXXXXXXXGRGVMEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAIFE------------ND------FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPVLPAGVGA 628
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI) HSP 1 Score: 317 bits (812), Expect = 2.120e-96 Identity = 154/204 (75.49%), Postives = 181/204 (88.73%), Query Frame = 1
Query: 442 MVVAINGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYEQRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSR 1053
M+ A+NG+IN+VWDSGLDWFW+SLLLFF+SPAL GSYICRALRLAVVFHP+AKRALPWLIPERNY+AVL+VAS GM+AIP+Y EYTLEVWEIIPKQT IL ++ FAV ACIYPFIRNVDDLF+ISKEL +VT A++ LAV QK ++GGVYE+RW+G+N+ + AAV+F +S+VDPLRRLA DPLAATKRNYADRVLLSR
Sbjct: 1 MLAAVNGAINIVWDSGLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLGNNLFLLFAAVVFSVSVVDPLRRLAFDPLAATKRNYADRVLLSR 204
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE) HSP 1 Score: 315 bits (808), Expect = 3.770e-92 Identity = 225/538 (41.82%), Postives = 292/538 (54.28%), Query Frame = 1
Query: 421 GVCVLLTMVVAINGSINVVWDS--GLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMAVLLVASVGMMAIPVYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELFLVTVAIVCLAVVQKTTAEWGGVYE-QRWVGSNISIFIAAVLFGISIVDPLRRLALDPLAATKRNYADRVLLSRTEPDSTVRTASGVSSGRSRDSSR-IRADSEEEVRLEEGDVGKVPGKDELTTAGGDGDVGNVVASAVIGNGVIATSTTDTNGAVAAGTWNEREPINTSVLTKQSSSVSNDTSIGGNRRDVVRRGQRERGSFRGRRGGGXXRGRPE-----------REEMEVWNFERLARTPLLAVAFEDYCKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEDRRLIFGRAYLEVKSMLEANLLRRFLNTDRFRSVR-----MQRENVQTMMDSPPLQAGV 1974
G ++++ V A+N S+ ++W + LDWFW+SLLLF + P + GSYICRALRLAV+FHPRAK+ALPWLIPERN++ L V + +P+YQ+ TLEVW+ VDDLFNIS+EL +VT+ + LA+ K G YE W G N++ FI A +FG+S+V PLR LA+DPLA +K+ DR +L+R + S + S ++ R SSR +R S +LEEG G G DE G D A ++E P N S S D G + + +F RGGG E +E W+FERLAR PL+A AFE Y ++ALCHE VLFL EVSRYQ D+ P S PSQ+ FC I + FI+ GS EEV+IS ++KR++EL KG+ FE EE+RRL+F RAYLEVK+MLE NLLRRFL TDRF+SVR MQREN T+ SP A V
Sbjct: 3 GSSMVVSYVAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLEVWK-----------------------------VDDLFNISRELIIVTILFLILAIGIKC----GLYYEVDMWTGGNLNFFITAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSEDVSYSAKATADIRGSSRAVRVASR---KLEEGLYGD--GVDENDDDGCD----------TTPXXXXXXXXXXXXXXXATSLYDEPPPANLSP-----SPSPGDPGAGNWQYQGI--------NFCTSRGGGAGXXXXXXXXXXXXXXXXEEMVEAWDFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRYQSGDFPEPAG---LSGPSQYQAFCRINDVFIRPGSREEVSISGVERKRLMELAHKGDVLFEAGTEEERRLVFARAYLEVKTMLEDNLLRRFLQTDRFKSVRAQRRMMQRENFPTVAASPHRLAEV 476 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1513.2984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1513.2984.1 >prot_E-siliculosus-1a_F_contig1513.2984.1 ID=prot_E-siliculosus-1a_F_contig1513.2984.1|Name=mRNA_E-siliculosus-1a_F_contig1513.2984.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=627bp MTGGPPSSIDVGGSSSGGAGGPPSSIDVGGGTGSSSYWEQRFGDGDFDPSback to top mRNA from alignment at E-siliculosus-1a_F_contig1513:13490..24851- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1513.2984.1 ID=mRNA_E-siliculosus-1a_F_contig1513.2984.1|Name=mRNA_E-siliculosus-1a_F_contig1513.2984.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=11362bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1513:13490..24851- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1513:13490..24851- >mRNA_E-siliculosus-1a_F_contig1513.2984.1 ID=mRNA_E-siliculosus-1a_F_contig1513.2984.1|Name=mRNA_E-siliculosus-1a_F_contig1513.2984.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3762bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1513:13490..24851- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |