mRNA_E-siliculosus-1a_F_contig15129.2982.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig15129.2982.1
Unique NamemRNA_E-siliculosus-1a_F_contig15129.2982.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: H0J5U5_9GAMM (Nucleoside recognition protein n=36 Tax=root TaxID=1 RepID=H0J5U5_9GAMM)

HSP 1 Score: 563 bits (1450), Expect = 2.470e-199
Identity = 303/312 (97.12%), Postives = 308/312 (98.72%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAA+LLPFLVEFGFMEFIGTMVRKPFR IFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLV NFV INHLFVQFYFTVVVSGLIAAVIVSRIPPLSRK+NDYYEPVGCQLSEER +NVGLFRYSLLQATRRAGSAPGPR+LAR+ALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF
Sbjct:  149 FFFFAAVLLPFLVEFGFMEFIGTMVRKPFRVIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVINFVGINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKTNDYYEPVGCQLSEERHDNVGLFRYSLLQATRRAGSAPGPRELARLALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 460
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: A0A060B0D2_9GAMM (Membrane protein n=7 Tax=Halomonas TaxID=2745 RepID=A0A060B0D2_9GAMM)

HSP 1 Score: 556 bits (1433), Expect = 9.500e-197
Identity = 298/312 (95.51%), Postives = 305/312 (97.76%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAA+LLPFLVEFGFMEFIGTMVRKPFR IFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYN REASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAA+IV+RIPPLS KSNDYYEPVGCQLSE+RTENVGLFRYSLLQAT RA  APGP++L R+ALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF
Sbjct:  149 FFFFAAILLPFLVEFGFMEFIGTMVRKPFRVIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNAREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAIIVARIPPLSLKSNDYYEPVGCQLSEKRTENVGLFRYSLLQATSRAADAPGPKELVRLALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 460
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: A0A8H9I2Q6_9GAMM (Membrane protein n=4 Tax=Halomonas TaxID=2745 RepID=A0A8H9I2Q6_9GAMM)

HSP 1 Score: 548 bits (1411), Expect = 2.110e-193
Identity = 294/312 (94.23%), Postives = 304/312 (97.44%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAALLLPFLVEFGFMEFIGTMVRKPFR IFNLPGRSAIDATASWMGSGTVGVLIT+QQYEQG+YNGREASVIATNFSVASIAFSLLV NFV++NHLF+ FYFTVVVSGLIAAVIVSRIPPLSRKS+DY+EPVGCQLSEERT+NVGL RYSLLQAT RA  APGP+ LAR+ALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF
Sbjct:  149 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRVIFNLPGRSAIDATASWMGSGTVGVLITSQQYEQGFYNGREASVIATNFSVASIAFSLLVVNFVNLNHLFIPFYFTVVVSGLIAAVIVSRIPPLSRKSDDYHEPVGCQLSEERTDNVGLLRYSLLQATCRAAGAPGPKALARLALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 460
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: UPI000F8F362A (YjiH family protein n=2 Tax=Halomonas TaxID=2745 RepID=UPI000F8F362A)

HSP 1 Score: 548 bits (1411), Expect = 2.110e-193
Identity = 292/312 (93.59%), Postives = 303/312 (97.12%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAA+LLPFLVEFGFMEFIG++VRKPFR IFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFV INHLFV FYFTVVVSGLIAAV+V+RIPPLS KSNDYYEPVGCQ+SEERTENVGLFRYSLLQATRRA  APGP+ L ++AL+NVIDIFLTLLPLVFAIGT+ALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWEL VVFLLRTAITLPIIAFMAHTFFF
Sbjct:  149 FFFFAAILLPFLVEFGFMEFIGSIVRKPFRVIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVGINHLFVPFYFTVVVSGLIAAVVVARIPPLSLKSNDYYEPVGCQISEERTENVGLFRYSLLQATRRAAGAPGPQALVKLALINVIDIFLTLLPLVFAIGTLALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELVVVFLLRTAITLPIIAFMAHTFFF 460
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: A0A0P8CIK3_9GAMM (Gate domain-containing protein n=26 Tax=Halomonas TaxID=2745 RepID=A0A0P8CIK3_9GAMM)

HSP 1 Score: 532 bits (1370), Expect = 3.500e-187
Identity = 282/312 (90.38%), Postives = 296/312 (94.87%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAALLLPFLVEFGFMEFIG++VRKPFR IFNLPGRSAIDATASWMGSGTVGVLIT QQYEQG+YN REASVIATNFSV SIAF+LLVT+FVDINHLFVQFYFTVVVSGLIAAVIV R+PPLSRKSNDYYEPVGCQL EE TE VGLFRYSL+QAT RA  APGPRKLAR+AL+NV+DIFL LLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEA+AAAPATLVGFADMFLPAVLATNIESELTRFVIACLS+TQL+YMSEIGALLLKSKIPIK WEL  +FLLRTAITLPIIAFMAH FFF
Sbjct:  148 FFFFAALLLPFLVEFGFMEFIGSLVRKPFRIIFNLPGRSAIDATASWMGSGTVGVLITTQQYEQGFYNRREASVIATNFSVVSIAFALLVTSFVDINHLFVQFYFTVVVSGLIAAVIVPRLPPLSRKSNDYYEPVGCQLREEPTEKVGLFRYSLIQATNRAAGAPGPRKLARLALINVMDIFLALLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAEAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSLTQLIYMSEIGALLLKSKIPIKLWELVAIFLLRTAITLPIIAFMAHAFFF 459
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: A0A1A0FN90_9GAMM (Uncharacterized protein n=8 Tax=Halomonas TaxID=2745 RepID=A0A1A0FN90_9GAMM)

HSP 1 Score: 530 bits (1366), Expect = 1.420e-186
Identity = 280/312 (89.74%), Postives = 298/312 (95.51%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAALLLPFLVEFGFMEFIG++VRKPFR IFNLPGRSAIDATASWMGSGTVGVLIT QQYEQGYYNGREASVIA+NFSV SIAF+LLVT+FVDINHLFVQFYFTVVVSGLIAAVIV R+PPLSRK+NDYYEPVGCQ+SE+ T  +GL RYSLLQATRRA  APGPR+LA++ALLNV+DIFL LLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEA+AAAPATLVGFADMFLPAVLATNIESELTRFVIACLS+TQL+YMSEIGALLLKSKIPIK WELA +FLLRTAITLPIIAFMAH FFF
Sbjct:  148 FFFFAALLLPFLVEFGFMEFIGSLVRKPFRVIFNLPGRSAIDATASWMGSGTVGVLITTQQYEQGYYNGREASVIASNFSVVSIAFALLVTSFVDINHLFVQFYFTVVVSGLIAAVIVPRLPPLSRKANDYYEPVGCQISEKPTAKIGLLRYSLLQATRRAAGAPGPRELAKLALLNVMDIFLALLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAEAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSLTQLIYMSEIGALLLKSKIPIKLWELAAIFLLRTAITLPIIAFMAHAFFF 459
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: UPI001D0A068C (YjiH family protein n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0A068C)

HSP 1 Score: 516 bits (1328), Expect = 8.800e-181
Identity = 275/312 (88.14%), Postives = 294/312 (94.23%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAA+LLPFLVEFGFMEFIG++VRKPFR IFNLPGRSAIDATASWMGSGTVGVLIT+QQYEQG+Y+GREASVIATNFSVASIAFSLLV NFVD+NHLFV FYFTVVVSGLIAA+IVSRIPPLS K++DY+E VGCQ+ EE TE VGLFRYSLLQATRRA  APGP +L ++AL+NVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLR+PEAQAAAPATLVGFADMFLPAVLATNI+SELTRFVIACLSMTQLVYMSEIGALLLKSKIPI  WELA VFLLRTAITLPIIA +AHT  F
Sbjct:  149 FFFFAAILLPFLVEFGFMEFIGSLVRKPFRLIFNLPGRSAIDATASWMGSGTVGVLITSQQYEQGFYSGREASVIATNFSVASIAFSLLVINFVDLNHLFVPFYFTVVVSGLIAAIIVSRIPPLSLKADDYHESVGCQICEENTEKVGLFRYSLLQATRRAADAPGPGQLTKLALINVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRLPEAQAAAPATLVGFADMFLPAVLATNIDSELTRFVIACLSMTQLVYMSEIGALLLKSKIPIALWELAAVFLLRTAITLPIIALIAHTIVF 460
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: A0A2N7UAU4_9GAMM (Gate domain-containing protein n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7UAU4_9GAMM)

HSP 1 Score: 515 bits (1327), Expect = 1.390e-180
Identity = 271/312 (86.86%), Postives = 294/312 (94.23%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAALLLPFLV+FGFMEFIG+++RKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYE+G+YN REASVIATNFS+ SIAFSLL+T+F+ INHLF+QFYFTVVV+GL AAVIV R+PPLSRK + YYEPVGCQL+E+RT+NVGL RYSL QA RRA  APGPR+LAR AL NV DIFL LLPLVFAIGTVALILAEFTPLFTWLSYPMVP+LELLRIPEA+AAAPATLVGFADMFLPAVLATNIESELTRFVIACLS+TQL+YMSEIGALLLKSKIPIK WEL V+FLLRTAITLPIIAFMAHTFFF
Sbjct:  152 FFFFAALLLPFLVDFGFMEFIGSLMRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEKGFYNRREASVIATNFSIVSIAFSLLITSFIGINHLFIQFYFTVVVAGLTAAVIVPRLPPLSRKPDTYYEPVGCQLAEKRTDNVGLLRYSLRQAVRRAERAPGPRELARNALFNVADIFLALLPLVFAIGTVALILAEFTPLFTWLSYPMVPILELLRIPEAEAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSLTQLIYMSEIGALLLKSKIPIKLWELVVIFLLRTAITLPIIAFMAHTFFF 463
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: A0A2N7TRJ7_9GAMM (Gate domain-containing protein n=9 Tax=Halomonas TaxID=2745 RepID=A0A2N7TRJ7_9GAMM)

HSP 1 Score: 515 bits (1326), Expect = 1.770e-180
Identity = 273/312 (87.50%), Postives = 291/312 (93.27%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAALLLPFLVEFGFMEFIG++VRKPFR IFNLPGRSAIDATASWMGSGTVGVLIT QQYE G+YN REA+VIATNFS+ SIAFSLL+T+FVD+NHLFVQFYFTVVV+GLIAAVIV R+PPLSRK + YYEPVGCQL+E+RTE VGL RYSLLQA RRA  APGPR+L R AL NV DIFL LLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEA+AAAPATLVGFADMFLPAVLATNIESELTRFVIACLS+TQL+YMSEIGALLLKSKIPIK WEL V+FLLRTAITLPIIAFMAH FFF
Sbjct:  149 FFFFAALLLPFLVEFGFMEFIGSLVRKPFRVIFNLPGRSAIDATASWMGSGTVGVLITTQQYETGFYNRREAAVIATNFSIVSIAFSLLITSFVDLNHLFVQFYFTVVVAGLIAAVIVPRLPPLSRKPDSYYEPVGCQLAEKRTEEVGLLRYSLLQAVRRAEKAPGPRELVRNALFNVADIFLALLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAEAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSLTQLIYMSEIGALLLKSKIPIKLWELVVIFLLRTAITLPIIAFMAHAFFF 460
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BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Match: A0A243T2Z6_9GAMM (Gate domain-containing protein n=9 Tax=Halomonadaceae TaxID=28256 RepID=A0A243T2Z6_9GAMM)

HSP 1 Score: 512 bits (1318), Expect = 2.910e-179
Identity = 269/312 (86.22%), Postives = 292/312 (93.59%), Query Frame = 1 
Query:    1 FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGSGTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLFVQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLFRYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITLPIIAFMAHTFFF 936
            FFFFAALLLPFLVEFGFMEFIG++VRKPFR IFNLPGRSAIDATASWMGSGTVGVLIT QQYE+G+YN REASVIATNFS+ SIAFSLL+T+FVD+NH+F+QFYFTVVV+GLIAAVIV R+PPLSRK + YYEPVGCQL+E+RTE +GL RYSL QA RRA  +PGPR+LAR AL NV DIFL LLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEA+AAAPATLVGFADMFLPAVLATNIESELTRFVIACLS+TQL+YMSEIGALLLKSKIP+K WEL  +FLLRTAITLPIIAFMAHTFFF
Sbjct:  149 FFFFAALLLPFLVEFGFMEFIGSLVRKPFRVIFNLPGRSAIDATASWMGSGTVGVLITTQQYEKGFYNRREASVIATNFSIVSIAFSLLITSFVDLNHMFIQFYFTVVVAGLIAAVIVPRLPPLSRKPDTYYEPVGCQLAEKRTEEMGLLRYSLTQAVRRAERSPGPRELARNALFNVADIFLALLPLVFAIGTVALILAEFTPLFTWLSYPMVPVLELLRIPEAEAAAPATLVGFADMFLPAVLATNIESELTRFVIACLSLTQLIYMSEIGALLLKSKIPLKLWELVAIFLLRTAITLPIIAFMAHTFFF 460
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15129.2982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H0J5U5_9GAMM2.470e-19997.12Nucleoside recognition protein n=36 Tax=root TaxID... [more]
A0A060B0D2_9GAMM9.500e-19795.51Membrane protein n=7 Tax=Halomonas TaxID=2745 RepI... [more]
A0A8H9I2Q6_9GAMM2.110e-19394.23Membrane protein n=4 Tax=Halomonas TaxID=2745 RepI... [more]
UPI000F8F362A2.110e-19393.59YjiH family protein n=2 Tax=Halomonas TaxID=2745 R... [more]
A0A0P8CIK3_9GAMM3.500e-18790.38Gate domain-containing protein n=26 Tax=Halomonas ... [more]
A0A1A0FN90_9GAMM1.420e-18689.74Uncharacterized protein n=8 Tax=Halomonas TaxID=27... [more]
UPI001D0A068C8.800e-18188.14YjiH family protein n=1 Tax=Halomonas malpeensis T... [more]
A0A2N7UAU4_9GAMM1.390e-18086.86Gate domain-containing protein n=1 Tax=Halomonas e... [more]
A0A2N7TRJ7_9GAMM1.770e-18087.50Gate domain-containing protein n=9 Tax=Halomonas T... [more]
A0A243T2Z6_9GAMM2.910e-17986.22Gate domain-containing protein n=9 Tax=Halomonadac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15129contigE-siliculosus-1a_F_contig15129:2..940 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size939
Model size939
Exons1
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.S
EggNOG OGs1NEAN@1224,1RPX6@1236,1XP0W@135619,COG3314@1,COG3314@2
EggNOG free text desc.Nucleoside recognition
Seed eggNOG ortholog999141.GME_07904
Seed ortholog evalue9.3e-159
Seed ortholog score566.2
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928025.527869-CDS-E-siliculosus-1a_F_contig15129:1..9401622928025.527869-CDS-E-siliculosus-1a_F_contig15129:1..940Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15129 2..940 +
1696318777.0397694-CDS-E-siliculosus-1a_F_contig15129:1..9401696318777.0397694-CDS-E-siliculosus-1a_F_contig15129:1..940Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig15129 2..940 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15129.2982.1prot_E-siliculosus-1a_F_contig15129.2982.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig15129 2..940 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig15129.2982.1

>prot_E-siliculosus-1a_F_contig15129.2982.1 ID=prot_E-siliculosus-1a_F_contig15129.2982.1|Name=mRNA_E-siliculosus-1a_F_contig15129.2982.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=313bp
FFFFAALLLPFLVEFGFMEFIGTMVRKPFRFIFNLPGRSAIDATASWMGS
GTVGVLITAQQYEQGYYNGREASVIATNFSVASIAFSLLVTNFVDINHLF
VQFYFTVVVSGLIAAVIVSRIPPLSRKSNDYYEPVGCQLSEERTENVGLF
RYSLLQATRRAGSAPGPRKLARIALLNVIDIFLTLLPLVFAIGTVALILA
EFTPLFTWLSYPMVPVLELLRIPEAQAAAPATLVGFADMFLPAVLATNIE
SELTRFVIACLSMTQLVYMSEIGALLLKSKIPIKFWELAVVFLLRTAITL
PIIAFMAHTFFF*
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mRNA from alignment at E-siliculosus-1a_F_contig15129:2..940+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig15129.2982.1 ID=mRNA_E-siliculosus-1a_F_contig15129.2982.1|Name=mRNA_E-siliculosus-1a_F_contig15129.2982.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=939bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15129:2..940+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTCTTCTTCTTTGCAGCGCTACTACTGCCGTTTCTGGTCGAGTTCGGCTT
TATGGAGTTTATCGGCACCATGGTGCGCAAGCCCTTTCGATTCATCTTTA
ATCTGCCGGGGCGCAGTGCCATTGATGCGACAGCGTCTTGGATGGGGTCG
GGGACCGTTGGCGTGCTGATTACTGCTCAACAGTACGAGCAGGGTTACTA
CAATGGTCGCGAAGCATCGGTGATCGCGACCAACTTTTCGGTCGCCTCGA
TCGCTTTTAGCCTATTAGTGACTAACTTTGTCGATATTAACCACCTTTTC
GTGCAGTTCTACTTCACGGTGGTGGTGTCAGGTTTAATCGCTGCGGTCAT
CGTGTCGCGGATTCCGCCGCTGTCGCGCAAATCCAATGACTATTATGAGC
CGGTAGGCTGTCAGTTGAGCGAAGAGCGCACCGAAAACGTAGGCCTGTTT
CGCTATAGCTTGTTGCAGGCAACCCGCCGTGCAGGCAGTGCGCCGGGGCC
GCGCAAGTTAGCACGCATAGCACTACTCAACGTCATTGATATTTTCTTGA
CGCTGCTACCCTTAGTATTTGCCATCGGCACCGTTGCACTGATTCTAGCC
GAATTTACGCCGCTATTTACCTGGCTTTCTTACCCTATGGTGCCGGTACT
TGAGCTGCTGCGTATTCCTGAAGCGCAGGCCGCTGCCCCAGCCACCCTAG
TAGGCTTTGCCGACATGTTTTTGCCAGCGGTATTGGCCACTAACATCGAA
AGCGAGCTGACTCGCTTTGTGATCGCCTGCCTTTCCATGACACAGCTGGT
TTATATGTCGGAAATCGGTGCGCTGCTGCTTAAATCGAAGATTCCCATCA
AATTCTGGGAACTGGCGGTAGTTTTCTTACTGCGTACTGCGATTACGCTG
CCAATCATCGCCTTTATGGCCCATACGTTTTTCTTCTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15129:2..940+

>mRNA_E-siliculosus-1a_F_contig15129.2982.1 ID=mRNA_E-siliculosus-1a_F_contig15129.2982.1|Name=mRNA_E-siliculosus-1a_F_contig15129.2982.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15129:2..940+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTCTTCTTCTTTGCAGCGCTACTACTGCCGTTTCTGGTCGAGTTCGGCTT
TATGGAGTTTATCGGCACCATGGTGCGCAAGCCCTTTCGATTCATCTTTA
ATCTGCCGGGGCGCAGTGCCATTGATGCGACAGCGTCTTGGATGGGGTCG
GGGACCGTTGGCGTGCTGATTACTGCTCAACAGTACGAGCAGGGTTACTA
CAATGGTCGCGAAGCATCGGTGATCGCGACCAACTTTTCGGTCGCCTCGA
TCGCTTTTAGCCTATTAGTGACTAACTTTGTCGATATTAACCACCTTTTC
GTGCAGTTCTACTTCACGGTGGTGGTGTCAGGTTTAATCGCTGCGGTCAT
CGTGTCGCGGATTCCGCCGCTGTCGCGCAAATCCAATGACTATTATGAGC
CGGTAGGCTGTCAGTTGAGCGAAGAGCGCACCGAAAACGTAGGCCTGTTT
CGCTATAGCTTGTTGCAGGCAACCCGCCGTGCAGGCAGTGCGCCGGGGCC
GCGCAAGTTAGCACGCATAGCACTACTCAACGTCATTGATATTTTCTTGA
CGCTGCTACCCTTAGTATTTGCCATCGGCACCGTTGCACTGATTCTAGCC
GAATTTACGCCGCTATTTACCTGGCTTTCTTACCCTATGGTGCCGGTACT
TGAGCTGCTGCGTATTCCTGAAGCGCAGGCCGCTGCCCCAGCCACCCTAG
TAGGCTTTGCCGACATGTTTTTGCCAGCGGTATTGGCCACTAACATCGAA
AGCGAGCTGACTCGCTTTGTGATCGCCTGCCTTTCCATGACACAGCTGGT
TTATATGTCGGAAATCGGTGCGCTGCTGCTTAAATCGAAGATTCCCATCA
AATTCTGGGAACTGGCGGTAGTTTTCTTACTGCGTACTGCGATTACGCTG
CCAATCATCGCCTTTATGGCCCATACGTTTTTCTTCTAATTCTTCTTCTT
TGCAGCGCTACTACTGCCGTTTCTGGTCGAGTTCGGCTTTATGGAGTTTA
TCGGCACCATGGTGCGCAAGCCCTTTCGATTCATCTTTAATCTGCCGGGG
CGCAGTGCCATTGATGCGACAGCGTCTTGGATGGGGTCGGGGACCGTTGG
CGTGCTGATTACTGCTCAACAGTACGAGCAGGGTTACTACAATGGTCGCG
AAGCATCGGTGATCGCGACCAACTTTTCGGTCGCCTCGATCGCTTTTAGC
CTATTAGTGACTAACTTTGTCGATATTAACCACCTTTTCGTGCAGTTCTA
CTTCACGGTGGTGGTGTCAGGTTTAATCGCTGCGGTCATCGTGTCGCGGA
TTCCGCCGCTGTCGCGCAAATCCAATGACTATTATGAGCCGGTAGGCTGT
CAGTTGAGCGAAGAGCGCACCGAAAACGTAGGCCTGTTTCGCTATAGCTT
GTTGCAGGCAACCCGCCGTGCAGGCAGTGCGCCGGGGCCGCGCAAGTTAG
CACGCATAGCACTACTCAACGTCATTGATATTTTCTTGACGCTGCTACCC
TTAGTATTTGCCATCGGCACCGTTGCACTGATTCTAGCCGAATTTACGCC
GCTATTTACCTGGCTTTCTTACCCTATGGTGCCGGTACTTGAGCTGCTGC
GTATTCCTGAAGCGCAGGCCGCTGCCCCAGCCACCCTAGTAGGCTTTGCC
GACATGTTTTTGCCAGCGGTATTGGCCACTAACATCGAAAGCGAGCTGAC
TCGCTTTGTGATCGCCTGCCTTTCCATGACACAGCTGGTTTATATGTCGG
AAATCGGTGCGCTGCTGCTTAAATCGAAGATTCCCATCAAATTCTGGGAA
CTGGCGGTAGTTTTCTTACTGCGTACTGCGATTACGCTGCCAATCATCGC
CTTTATGGCCCATACGTTTTTCTTCTAA
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