mRNA_E-siliculosus-1a_F_contig1509.2961.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1509.2961.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1509.2961.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot
Match: D7FJN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN0_ECTSI)

HSP 1 Score: 867 bits (2241), Expect = 1.540e-314
Identity = 429/453 (94.70%), Postives = 434/453 (95.81%), Query Frame = 1

Query:    1 MHFPTKKHILRIFYFRKMRLHLVVGGLVLSSAASAEVTRPNEFKKWRFENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTTEGTLDYTHVIFIGTNELNRVVEAITRYSIGGEGYVDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALIDDESIFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQDECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPLVGVMCPEEEWY 1359
            MHFPTKKHILRIF            GLVLSSAASAEVTRPNEFKKWRFENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTT + TLDYTHVIFIGTNELNRVVEAITRYSIGGEGY DPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAAL+DDES+FTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQ+EC LCADSTTPCATC VDQPAITKCDDPS+KVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRP VGVMCPEE WY
Sbjct:    1 MHFPTKKHILRIFER---------AGLVLSSAASAEVTRPNEFKKWRFENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTKDETLDYTHVIFIGTNELNRVVEAITRYSIGGEGYEDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALVDDESLFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQEECMLCADSTTPCATCFVDQPAITKCDDPSSKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEHWY 444

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BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot
Match: D7FYC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC5_ECTSI)

HSP 1 Score: 788 bits (2035), Expect = 2.990e-283
Identity = 384/436 (88.07%), Postives = 401/436 (91.97%), Query Frame = 1

Query:   55 RLHLVVGGLVL-SSAASAEVTRPNEFKKWRFENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTTEGTLDYTHVIFIGTNELNRVVEAITRYSIGGEGYVDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALIDDESIFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQDECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPLVGVMCPEEEWY 1359
            R HLVVGGLVL S  ASAEVTRPNEFKKWRFENPP+MVV GDSN+DTGRRFN PASFQFEDEGIGPFPWKR+YDGPDSDEKTAAYMPFEGSV+NGK WPTWLRIPDEHNFATSS +ATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDD STTT  TLDYTHVIFIG NEL     A+TRYSIGGEGY DPVAFDKVFEVNATTG PVLDE+GLPVPTF PMIEEVLGAWDEGI RLI AGVTGRILLANVGS KGL GIAGTETATVLDQ+ L LRSGAELLV KYAGQVRMLDMYTLFAAL+DDESIF DLGFTPGEGSLLA++CIQFNF VDDAAEIMGTQALRNPDCQ+EC LCADSTTPCATCLVDQPA+TKCDDPS K+FYD IHFTTDFHL+ GEAIRQCSKDSPNFDR  VGV+CPEE+WY
Sbjct:    3 RSHLVVGGLVLLSGVASAEVTRPNEFKKWRFENPPQMVVLGDSNSDTGRRFNTPASFQFEDEGIGPFPWKRVYDGPDSDEKTAAYMPFEGSVTNGKVWPTWLRIPDEHNFATSSATATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDTSTTTNDTLDYTHVIFIGINELIMAAAAVTRYSIGGEGYQDPVAFDKVFEVNATTGLPVLDENGLPVPTFTPMIEEVLGAWDEGIARLIGAGVTGRILLANVGSLKGLDGIAGTETATVLDQITLVLRSGAELLVDKYAGQVRMLDMYTLFAALVDDESIFLDLGFTPGEGSLLAETCIQFNFVVDDAAEIMGTQALRNPDCQEECALCADSTTPCATCLVDQPAVTKCDDPSTKIFYDSIHFTTDFHLVLGEAIRQCSKDSPNFDRAFVGVLCPEEQWY 438

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BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot
Match: D7FJN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN5_ECTSI)

HSP 1 Score: 779 bits (2011), Expect = 4.430e-279
Identity = 385/439 (87.70%), Postives = 405/439 (92.26%), Query Frame = 1

Query:   52 MRLHLVVGGLVLSSAASAEV----TRPNEFKKWRFENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTTEGTLDYTHVIFIGTNELNRVVEAITRYSIGGEGYVDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALIDDESIFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQDECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPLVGVMCPEEEW 1356
            M+   VVGGLVL  AASA      TRPN+FKKWRFENPPKMVVFGDSN+DTGRR+NAP SFQ +++GIG FPWKRLYDGPDSDEKT+AYMPFEGSVSNGKAWPTWLRIPDEHNFATSS SATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIV++    T+ TLDYTHVIFIGTNELNRVVEAITRYS GGEGY DPVAF+KVFEV+ATTGFPV D SGLPVPTFAPMIEEVLGAWDEGIGRLI AGVTGRILLANVGSPKGL GIAGTETA +LD VA  LR GA+LLVAKY+ QVRMLD+YTLFAAL+DDESIFTDLGFTPGEGSLLADSCIQ NFFVDDAAEIMGTQALRNPDCQ+ECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDG+HFTTDFHLIFGEAIRQCSKDSPNFDRP VGVMCPEEEW
Sbjct:    1 MKPDQVVGGLVLLGAASARASGVATRPNKFKKWRFENPPKMVVFGDSNSDTGRRYNAPNSFQLKEDGIGAFPWKRLYDGPDSDEKTSAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSASATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVNE----TDETLDYTHVIFIGTNELNRVVEAITRYSTGGEGYEDPVAFEKVFEVDATTGFPVFDASGLPVPTFAPMIEEVLGAWDEGIGRLIGAGVTGRILLANVGSPKGLTGIAGTETAILLDSVAQALRVGAQLLVAKYSHQVRMLDLYTLFAALVDDESIFTDLGFTPGEGSLLADSCIQVNFFVDDAAEIMGTQALRNPDCQEECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGVHFTTDFHLIFGEAIRQCSKDSPNFDRPFVGVMCPEEEW 435

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BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot
Match: D8LCE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE7_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 1.980e-139
Identity = 220/426 (51.64%), Postives = 284/426 (66.67%), Query Frame = 1

Query:   79 LVLSSAASAEV----TRPNEFKKWRFENPPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTTEGTLDYTHVIFIGTNELNRVVEAITRYSIGGEGYVDP-VAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFLRSGAELLVAKYAGQVRMLDMYTLFAALIDDESIFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQDECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPLVGVMC 1341
            L L  AA+ E     TRP  +KKWR    PKMVVFGDS +DTGRR+NAPAS+ FE  GIG +PW +LY+ PDS+ K  A++P  GS++NGK WP WL +P E NFAT++ SAT+ FR+RE C GYTGEGED PT TL+EQI RYF    +DA      T DYTH+I+IG  +LN    A  RYSIGGEGYVDP V FD +F+V          + G    T   +I E+  +W  GI RLIDAGVTG ILL N+G+P+GL+   GT    ++  +AL +R+ A+ +  ++  QVR+LD YTLF+A++D   IF +LGF   EGS L+D C+  +F VD   E+ GTQALR   CQ+EC LCAD+T+PC TC    P+   C DP +++F+   +F+T FH I GEAIRQCSKDSPN+DRP+V  +C
Sbjct:   20 LALQGAAAQEEDGRSTRPLPYKKWRTN--PKMVVFGDSQSDTGRRYNAPASYVFE--GIGVYPWPKLYEAPDSESKFRAFLPGAGSMTNGKMWPEWLNVPQELNFATATASATETFRTRENCEGYTGEGEDLPTGTLDEQITRYF----NDAD--LHETADYTHIIYIGNEDLNSHSAATARYSIGGEGYVDPYVPFDMLFDVA---------DDGTVTSTHVHIIAELAESWRSGIARLIDAGVTGTILLGNIGNPEGLSSYIGTPLGEIVRSIALTIRAEAQAVADEFPDQVRILDNYTLFSAIVDTPEIFENLGFVAPEGSFLSDPCLDLDFAVDYLGEVAGTQALRPVGCQEECALCADNTSPCGTCFEGNPSGQVCSDPDSRLFWGSRYFSTAFHHILGEAIRQCSKDSPNYDRPVVLELC 426

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BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot
Match: A0A6H5KTW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW7_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 1.020e-89
Identity = 168/298 (56.38%), Postives = 187/298 (62.75%), Query Frame = 1

Query:  160 MVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSD-----EKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFPTATLEEQIDRYFYEIVDDASTTTEGTLDYTHVIFIGTNELNRVVEAITRYSIGGEGYVDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLA-------------------------------GIAGTETATVLDQVALFLRSGAELLVAKYAGQV 945
            MVVFGDSN+DTG RFN P+SFQF+D+GIG FPWKRLYDGPD D     EKT+AYMPF+ S SNG AWPTWLRIPD                                 A L E +  +F        T     +DYTHV FIG NE+NRV+EAITRYS GG+ Y DPVAF+KVFEV+ATTGFPVL ES LPVPTFAP+IEEVLGAWDE IGRLI AG+TGRI LANVGSPKGLA                               GIAGTET  +LD VA  LR GA+LLVAKY+ QV
Sbjct:    1 MVVFGDSNSDTGSRFNTPSSFQFKDDGIGAFPWKRLYDGPDRDVSDCVEKTSAYMPFDNSASNGIAWPTWLRIPDVGG------------------------------APLVETL--FFVACCKLLFTLA---VDYTHVAFIGANEMNRVIEAITRYSTGGQSYQDPVAFEKVFEVDATTGFPVLHESSLPVPTFAPIIEEVLGAWDEVIGRLIGAGITGRIHLANVGSPKGLAALSAVAGFVFPARKENEPLILLLLRSRRHAHGIAGTETGFLLDSVAQALRIGAQLLVAKYSPQV 263

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BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot
Match: A0A6H5KNY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY6_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.220e-70
Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 1

Query:  976 ALIDDESIFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQALRNPDCQDECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPLVGVMCPEEE 1353
            AL+DDESI +DLGFTPGEGSLLA SCIQFN FVDDAAEIM TQALRNPDCQ+ECTLCADST PCATCLVDQPAITKC +PS K+FYDGIHFTTDFHL FGEAIRQCSKDSPNFDR  VGV+CPEEE
Sbjct:   32 ALVDDESIVSDLGFTPGEGSLLAYSCIQFNLFVDDAAEIMRTQALRNPDCQEECTLCADSTAPCATCLVDQPAITKCKEPSTKIFYDGIHFTTDFHLTFGEAIRQCSKDSPNFDRAFVGVICPEEE 157

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BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot
Match: D8LHV8_ECTSI (GDSL-like lipolytic enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV8_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 2.080e-67
Identity = 151/424 (35.61%), Postives = 226/424 (53.30%), Query Frame = 1

Query:  157 KMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTAAYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGEGEDFP--TATLEEQIDRYFYEI-VDDASTTTEGTLDYTHVIFIGTNELNRVVEAITRYSIG---GEGYVDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEVLGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIA------GTETATVLDQVALFLRSGAELLVAKYAG----QVRMLDMYTLFAALIDDESIFTDLGFTPGEGSLLADSCIQFNFFVDDAAEIMGTQA--LR----------NPDCQDECTLCADSTTPCATCLVDQPAITKCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPLVGVMCP 1344
            K++VFGDSN+D GRRF+AP  + F D  IG +PW+++YD   +D +    +  EG+ +NGK W  +L IP+  N+AT SG+ATD FRS++ CTGYT + +     T TL EQ+ +Y  +  ++D         +YTH I IG N+++ V EA+ R ++    G  Y +PV+ D +                     F  M++ V       +  LI+ GVTGRIL+ N  SP G+          G   A   DQ    + +  +L ++  +     QVR+LD+Y+L  + + D  IF + GF   + S   + C+ +NF VD + +IMG+QA  LR          N    DEC LC D  +PC  CLVD P ++ CD P   +F+DG+H T  F+ +F  A+ +CSKD  +  +P VG +CP
Sbjct:   81 KIIVFGDSNSDAGRRFDAPNVYPFSD--IGVYPWEKVYD---ADGEGMVDVYHEGTNTNGKVWAQYLNIPNVQNYATGSGTATDTFRSQQLCTGYTTKADKASRRTGTLGEQMTKYLKDFSLEDGKIGCSS--EYTHFIGIGMNDVSNVAEAMQRTALAEYLGVTYTEPVSVDDM--------------------NFVTMMQGVTDDIVAAVATLIEMGVTGRILVPNFPSPFGVPAFDSPDVYYGLTLAEFYDQFITTMNTMLDLKLSALSSAGEDQVRVLDLYSLIDSSVHDRDIFNEEGF---KTSSTPEQCLTYNFHVDSSTDIMGSQAQALRGKLFDWAQCDNYGPTDECVLCQDQMSPCQNCLVDPPTVSVCDSPDEHIFWDGLHTTDAFNKVFANAVFECSKDELDGSQPWVGKLCP 474

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1509.2961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
D7FJN0_ECTSI	1.540e-314	94.70	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7FYC5_ECTSI	2.990e-283	88.07	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7FJN5_ECTSI	4.430e-279	87.70	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LCE7_ECTSI	1.980e-139	51.64	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5KTW7_9PHAE	1.020e-89	56.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KNY6_9PHAE	1.220e-70	87.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LHV8_ECTSI	2.080e-67	35.61	GDSL-like lipolytic enzyme n=2 Tax=Ectocarpus TaxI...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1509	contig	E-siliculosus-1a_F_contig1509:12873..19644 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1362
Model size	1904
Exons	10
Ec32 ortholog	Ec-09_000420.1
Ec32 ortholog description	SGNH hydrolase-type esterase domain
Hectar predicted targeting category	signal peptide

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928020.0367198-UTR-E-siliculosus-1a_F_contig1509:12872..13414	1622928020.0367198-UTR-E-siliculosus-1a_F_contig1509:12872..13414	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1509 12873..13414 -
1696318774.8358161-UTR-E-siliculosus-1a_F_contig1509:12872..13414	1696318774.8358161-UTR-E-siliculosus-1a_F_contig1509:12872..13414	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1509 12873..13414 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1509.2961.1	prot_E-siliculosus-1a_F_contig1509.2961.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1509 13415..19644 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1509:12873..19644-
coding sequence from alignment at E-siliculosus-1a_F_contig1509:12873..19644-

protein sequence of mRNA_E-siliculosus-1a_F_contig1509.2961.1

>prot_E-siliculosus-1a_F_contig1509.2961.1 ID=prot_E-siliculosus-1a_F_contig1509.2961.1|Name=mRNA_E-siliculosus-1a_F_contig1509.2961.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=454bp
MHFPTKKHILRIFYFRKMRLHLVVGGLVLSSAASAEVTRPNEFKKWRFEN
PPKMVVFGDSNADTGRRFNAPASFQFEDEGIGPFPWKRLYDGPDSDEKTA
AYMPFEGSVSNGKAWPTWLRIPDEHNFATSSGSATDAFRSRERCTGYTGE
GEDFPTATLEEQIDRYFYEIVDDASTTTEGTLDYTHVIFIGTNELNRVVE
AITRYSIGGEGYVDPVAFDKVFEVNATTGFPVLDESGLPVPTFAPMIEEV
LGAWDEGIGRLIDAGVTGRILLANVGSPKGLAGIAGTETATVLDQVALFL
RSGAELLVAKYAGQVRMLDMYTLFAALIDDESIFTDLGFTPGEGSLLADS
CIQFNFFVDDAAEIMGTQALRNPDCQDECTLCADSTTPCATCLVDQPAIT
KCDDPSNKVFYDGIHFTTDFHLIFGEAIRQCSKDSPNFDRPLVGVMCPEE
EWY*

mRNA from alignment at E-siliculosus-1a_F_contig1509:12873..19644-

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1509.2961.1 ID=mRNA_E-siliculosus-1a_F_contig1509.2961.1|Name=mRNA_E-siliculosus-1a_F_contig1509.2961.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6772bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1509:12873..19644- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCACTTCCCCACCAAGAAGCACATTCTTCGAATTTTCTACTTTGTTTT
TTTTCATCAACTTCCCGCGCAACCTCTCGTTGCTGTAAAAAAGCAGCCCC
ACCCACGTTCACATTCAGCATTTACCCTCGCATCAACAACCTCGAGGCAG
AACGTATTCCAGGTTCCTTTTGTGACGATCGGGGCATCTTACACCAAGCT
TGTGTATACACGGGCCTACTCTCAAGGAACCGCTGTCGTCAGTGAGCAGG
TCCAAGCGCAAGATGAGGTTGCATCTGGTTGTCAACAGCAAGCGCAAGAT
GAGGTTGCATCTGGTTGTCGGAGGCTTGGTGCTGTCCAGTGCGGCATCTG
CGGAGGTGACGAGGCCGAATGAGTTCAAGAAATGGCGCTTCGAGAATCCT
CCGAAGGTGCGGGTGGAGTTGGGTTTGGGAGTGGGTGAGGTACCGGTTAT
GTATGCCCCGTGTTGATCGGCAGCAGGCAGACCTAGATTTTGCGAAATGA
TGGTTTTTGATTAGCAAGGAAGGGTGAGCAATAATCTCTTCTTCTGCCGC
GGCGGGCGGGCCGGGTGCAGCCAATGGATTGCCCGAGGGTAAAGAGTTGG
GCTCGACATTCATGTGACATCTCGACAGGCTGGGGTCTTGTGCCGCGAGC
GAAGACTCACAGTAGATCTATGTAGATCTCCTGCTTTGGTGCCAGGGGCG
ACCGTGTGCGTATTTCCCGATGGATGACGACAATCAATCCCGCCGAACAC
TTTTGCCTCCATGGTTGCGATGGACCGACCGGCAGATAGAATGAGCAAAT
AAATGTCTAAGAATTCACATGGGATGGATAGAAATGTACTGGAGATTTGC
CCAGGGTGGAGAGAACGCCGGTCTTGTCTTGGCCCCGGAAAACGGATTGG
CCTAGACTACACAGTAGTTTTTGCTGTACAAGTGTCTTCGTTATGCGGAA
CTCAACCAACCTGCTTCGGACAGAACAACAACCGAACAACCGCGGATGGA
ATGTTGGTCCAGACAAAGAGCCGAAATTTTGTTTTTTCTCCGCCTTCGAT
GCATATTGACTACTATTCATGTACTGTGCTGTCAATGCGTAGGTTACATG
AATTCCCCCATATTGTCGTGTATGTACTCGTACGTTGTCGCAGTGGCTCG
AGGACGGAAAAAAAGTAGTTGGGAGCCACCCATGGTGGTAGACTTGGTGG
TAGACTATTCATAGTGGAATACTGATCCAGTGCCGCTGGTTTTTCGCAGT
CGGTATATTGCAACTGCTCTGGTGACATTGCAATTCCTCTCAAGCAAGGT
TTCCCTGGTGGTGCGCTCGCTGAAATATTGGGGTGTCCTGCACGGGCTTC
GGGAAGTTTCTTCGGCAAGTTTGCACCCGGTGACCAAAGCATGTCCTCTT
CTCGACCTCTGCCACTTGCTGCTCTCTTTGTGCTTCGAAACCACGAAAAA
GATGGTGGTGTTCGGTGATTCCAACGCGGACACCGGAAGGAGGTTCAACG
CCCCGGCCAGCTTCCAGTTCGAGGACGAGGGGATCGGGCCCTTCCCGTGG
AAACGGCTGTACGACGGGCCGGACAGTGACGTGAGTGGGCGATTTTTCTT
GAGGCAGTCCTATCATATCATATTTTATTATGTCTCGCCGATTTCGTAGA
CTAAGCGTGCAGAAGGTACTTCGGAACGGGCCATAGGTATGGACGGCCGG
GAGATCGCTCCAGCATCCATGGTGGTGATGTGTGCTATTTCGGGGTGATG
GCTGTTAGCCGATATGTGTGTTTGCAGCTGCCGTTTCGGCGAAATGTGAC
TTTCCCACATTTTCCCGATAATCAGGCTATTACAGTAGCGAAGCGCAGAC
CGCTGCAGCAACACGTGACCCTTCTGCCATATGCGCGAAAAATTAATAAT
TATGAGGCAAAGCAAACAAAGGCAAAACCACCCATGGACAATACGTGTCA
ATATTTTCTGGTCCATCAATCTTTGCCTGTGTTGCCCCGCGCGAAGGCTT
GCTGCCAAGTGCTGCCTTGCCTTGATGTCAAACGCCCGTTTGGGCGGGAG
ATGTTTGCCGTCTTACAGCAGCAGAGCAGTGGTTCCTGGGTTGGGCTCGC
GGACAATGACCCGAGAGGGAGCAGAAGTGATACTATTTATTATTGTCGTG
ACAATGCCGACGGTGTTAGCTCTCTACACCCTTGTGTTGTTCTCTCCTGT
ACCCGTAACAGATGATGTTCGCATGTCGCGCCCCCTCAACTGCTGTCGTT
GCTATTCTTTGTGCTCTTCCTACTGTCCGCAGGAGAAAACGGCCGCGTAC
ATGCCGTTTGAAGGCTCCGTGTCCAATGGAAAAGCGTGGCCGACGTGGCT
TCGTATCCCCGATGTGAGTGACGTACGGGCTGTTGGCAACTTGTTCTGTT
GGCCTGCCGCAAGCTCTACAGGTGTTACGCACAACTTTCCATGAGCACGC
CTTTAATTTGGCTCCCGTTCTTTGGAGGTCTTCGTCGCGTGCTTTGCAGT
CTCAACGTTCTGGCATTAACACCGGTACGGTGGTGTTTCCCTCTAGTCAG
GAGCGCTCAATCTCCCACACTACTGACAGTTTCCCAAACGCCCCGTGGGA
CTCCCATGGGCCGCCCATGGGCCGCCCATGAAGTGCCCACCGTGGGCATT
TCAACCTAGAACTTCGCCACCGGCATATCAACCTAGAACTTAGCCACCAG
CGCCAACCTAGCACATATCGTGTGGGCTTGGGGTTAGGGTTATATATTAT
ATGTAGATGGGACGAACGCACATGACAGACCATGCGCTGTCCCGCCTCAA
TTGCCAACCGTTTCGCATGGAATACGCCGGGTGATCAGGAGCACAACTTT
GCGACGAGTTCAGGGTCCGCCACGGATGCGTTCCGTTCTCGCGAGAGGTG
CACCGGGTACACCGGGGAGGGGGAAGACTTCCCCACGGCGGTAAGCCTGT
TCGATACTGTTGACGCACACGCCGATAAAAAAGGAGGTCCTTTCCACCCC
CGGCCTGTTGCTGGGGCCACCGCCATGTCGTAGGATGAGTCGAAGATTAG
AACGACGAGCGGGGGAGCTCTTGAGTGTATGCTGCTACACTAGCCTCCGT
TGAAAAAACGCGTTGGCGAGGTTTTATACCCAGGGGAAAAGGGAGGGTCA
GAACCGTCGTGATACAAGCAGAGAGGCTCAGAAAGAGGGAGAAAAGGGAA
GGGAGAGACAGATGCAGACAACACAGCAAGATGAAGTCAACGTTCACCCG
TGTCTGATGCATGATAGTCTGGTCGCTTGTTGCACTGATCTCTTCCTTTC
CTGTACCGGAACCCGACTATAAGTATGCTTGCACGGCCCTCTCCTGTTTG
CGTCTTCGGCGCCTGAACCGTTGAAAGTACTGTTGCACCACTTGTTTCGG
AGCCATCGCTAGCATTCGAGCAATAATTGGTCGTCGCCTCGCTTCTGCGG
CAACTTGCCGCCTCTCTTCAGTTTGTCGGGCTGAGCTTTGGGGGCGTGCT
GACGAGTTGGTCGACTGCCCTGTCACTCGTTCACGTTCTTTGCAGACGCT
GGAAGAACAGATCGACCGTTACTTCTACGAAATCGTCGACGATGCCAGCA
CAACTACGGAGGGCACCCTAGGTGAGAAAAGTCATATTGACGCCCCAGCT
CTCGACGATATAGGCCTTCAGGTTGAACTCGGGTTTCCTTTGTCGAACGG
TTGCCGTTTCCGTTTGCAGCAAGATACTATTTCGAGCTACAGTACAACGC
ATTCCCTGTGCGCACTTGACACCATTACGGTCAACGCTGAATAGTTTTGA
TGAGGCTGACAGCTTCCTGCAATCGCTACCTATGGAGATCTAGGTTGATG
CCAGACCGTTCATGATTTCGCACTATCAATTTGGCAGGGCTGCTCTGAGC
GCCATGCGAATGTTTATCCGTCCCTGTTGAGCAAGTCTCGCAAGTATCGG
AGCACAAAGAAAGGCCTCCCATGCGTGCCTGATGGTGCACAACTAACTGC
TGCATCGTCTTTCCGCCTCGCTGTGCATGCAGACTACACCCACGTTATTT
TCATTGGGACAAACGAGCTGAACAGGGTAGTAGAGGCCATCACCCGCTAC
TCCATTGGAGGAGAGGGTTACGTAGACCCCGTGGCCTTCGACAAGGTTTT
CGAGGTTAACGCCACCACCGGGTTTCCAGTTCTCGACGAAAGCGGCCTCC
CGGTACCCACCTTCGCCCCCATGATCGAGGTGAGGATGGATGTATCGCTT
AACAAGACGATTGCTCGAAGGAATAAGGTTCGATTTTAGATGAACGGTTT
GTTGTAGTAGTTAAGGTGGTGGTGGTGGTGGATGGTGGTGCTGCTGCCGT
GCCGCTGCTGTCGCTACCGCCGCCGCCGCCACTCACTGCCGGTACATCGA
CACGCGCTGCATCAATTTCTTTCATCGTGGCTTGCCGAAGCACGAAATCA
GTCTTCCTTACATACCGTACGCGGGAATGCTTTACCCTTGTGAGCGTTGA
GTTCGCCAGCTGCAACCTGGAGCTCCGGCAATGTAGGCATGATGTGAGCT
TCGAGTGATGAGTGATGAGGTGTGAGCCTCATTCCTGCCCCTCAAGCCTC
TGCAGGCTGAAGTCGAGCTCTGCTCCCTGGCGAAACGCGCTCATCCCTTC
ATTCTTCCAACGTGTGCTTACGCTCACCTTTTTCACGTGTGCGTTACAGG
AAGTGCTCGGTGCTTGGGATGAGGGGATCGGCAGGCTGATCGACGCTGGC
GTCACCGGGAGAATCCTCCTCGCCAACGTCGGATCTCCCAAGGGGCTGGC
TGTGAGTGCTGACGAGTTTATCGAATACTTTCAACGTCTACGTACAGTAG
TACACTCATCTCCTTCTAAACACGTTGCGGCACCGACGACGAACCGGAGG
ACGACGCCGGCCTGTTAAGGCTGCGACGAGTAGTCCATAGCTTCGTCCTT
GTGCATATTTGTCGGACTACAGTAAGGTGGTTGCCTTGAACTATCTGCGT
GCCCACCTGGATGTTCGAGGTCGCAGACGATGTTGAGAACGGCCGCTGCC
AGCGGTAGTCTACGCAGGTTTTTCTATGTAAGCAAACACACTGAATAAAG
CATAGTCTAGTCTAGAATCGGGGTTAGGGTTAAGGTCTACGTGTGGCAGT
CCGCTGTCGGCAGGCGCTGGGTGCGTTTCAATCAACTAACTGCTGATTCC
TACTTGCTGCGTTCTCGACGACACGCACAGGGTATTGCCGGTACGGAAAC
CGCAACAGTTTTGGACCAGGTCGCCCTGTTCCTTCGCAGCGGGGCCGAAC
TGTTGGTTGCCAAGTACGCTGGTCAAGTGCGAATGCTGGACATGTACACT
CTGTTCGCGGTGAGTCCTGGGGAGACTCTAGAAGAGAAAACAATGTCGAA
GAAGGACAAATTGCATACCCAGACATAGATTCTGGCGTCCAGAACACGTT
GGAACGCTGTCCATCGATGGCGCACGAGACAACAGTGATGCAACGCATTT
GATAATTAGGGTCATGGTGTATATTTTTTCCGTTGTTGACAGTCGAGTCA
GGCGTCAGGCATGAAACGTCTGCTTGACGTTGACCCAGATTGGGCGTCCA
GCAGAGCAGCTGTACAGCGTTGTCTACATTCATGGTTGTTGTGGCATTCC
CCTACACACCCTCGCGCCCCCACCGGGCGCTTCATCGGCTATGCTAGTGC
CACGTCCGCGAACGGCCGCCGAATTCTGTCTTGCGGCCTTCATTCTCCGT
CCTCACCATGGATGGATGGTTGACAGATGGACCATGAACATTTCACGTAA
CCCATAGTCCACCCCCCCGCCCGCATCCAACGTCATCCGCCAGGCGCTTA
TTGACGACGAGTCCATCTTCACGGACCTCGGCTTCACGCCCGGAGAAGGA
TCCCTCTTGGCCGACAGCTGCATCCAGTTCAACTTCTTCGTGGACGACGC
CGCCGAGATCATGGGGACGCAAGCCTTGCGCAACCCGGACTGCCAGGATG
AGTGCACGCTCTGCGCCGACTCGACCACCCCGTGCGCGACGTGCTTGGTG
GACCAGCCGGCCATCACCAAGTGCGACGACCCTTCGAACAAGGTCTTCTA
CGACGGCATCCACTTCACCACAGACTTCCACCTCATCTTCGGAGAGGCCA
TCAGGCAGTGCTCCAAGGACAGCCCCAACTTCGACCGCCCGTTGGTGGGA
GTTATGTGCCCGGAGGAGGAGTGGTACTAAGCGTGATGGCTGACGCGGGG
TGGCAGTGTTGCTTGCCTCAACCAAACCGTCGCCGTTTTTTGTGCTCGCT
GTGAGGAGGTGGACTGACTGGTGCGCCGCCTCACAAGAACTGTCCAGGAG
ACTACTGTACGCCCTTTGTAAAGTTCACGGACTTACTGTAGACTGTTACG
GCATTCTGGCGGGGGGGCATTTCGGCAGCGTATGTAGAGGTCGGGTCAAC
CTCTCTTCGGGTGGTCACGTCGAATCACATCATCATCACCCCTTCAGGGG
TGGTTGGGTTCCAAAGGAATGCGCCCGTACCATAGAAAAGCTGAAGATAA
GTATAATAGTCGAGGTTCGACTTGGTGAAGTCATGATGACGCTCCGAGAA
TACGATTGGTGTGAATGACAGCAGGGACGCGAGTGAAACTTGTCGTCCAA
TTGCTCGCATATATGTGTGGTAGGCTCCCCGTTGGGTGGATTGGTGTGGT
GTGTGGTGTACTTGACAGTAGGACCGTGCTCGTTCGTTCGTGGAACGGCG
ACCTGTACCAGGTGAGTATGTG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1509:12873..19644-

>mRNA_E-siliculosus-1a_F_contig1509.2961.1 ID=mRNA_E-siliculosus-1a_F_contig1509.2961.1|Name=mRNA_E-siliculosus-1a_F_contig1509.2961.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2724bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1509:12873..19644- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCACTTCCCCACCAAGAAGCACATTCTTCGAATTTTCTACTTTATGCA
CTTCCCCACCAAGAAGCACATTCTTCGAATTTTCTACTTTCGCAAGATGA
GGTTGCATCTGGTTGTCGGAGGCTTGGTGCTGTCCAGTGCGGCATCTGCG
GAGGTGACGAGGCCGAATGAGTTCAAGAAATGGCGCTTCGAGAATCCTCC
GAAGCGCAAGATGAGGTTGCATCTGGTTGTCGGAGGCTTGGTGCTGTCCA
GTGCGGCATCTGCGGAGGTGACGAGGCCGAATGAGTTCAAGAAATGGCGC
TTCGAGAATCCTCCGAAGATGGTGGTGTTCGGTGATTCCAACGCGGACAC
CGGAAGGAGGTTCAACGCCCCGGCCAGCTTCCAGTTCGAGGACGAGGGGA
TCGGGCCCTTCCCGTGGAAACGGCTGTACGACGGGCCGGACAGTGACATG
GTGGTGTTCGGTGATTCCAACGCGGACACCGGAAGGAGGTTCAACGCCCC
GGCCAGCTTCCAGTTCGAGGACGAGGGGATCGGGCCCTTCCCGTGGAAAC
GGCTGTACGACGGGCCGGACAGTGACGAGAAAACGGCCGCGTACATGCCG
TTTGAAGGCTCCGTGTCCAATGGAAAAGCGTGGCCGACGTGGCTTCGTAT
CCCCGATGAGAAAACGGCCGCGTACATGCCGTTTGAAGGCTCCGTGTCCA
ATGGAAAAGCGTGGCCGACGTGGCTTCGTATCCCCGATGAGCACAACTTT
GCGACGAGTTCAGGGTCCGCCACGGATGCGTTCCGTTCTCGCGAGAGGTG
CACCGGGTACACCGGGGAGGGGGAAGACTTCCCCACGGCGGAGCACAACT
TTGCGACGAGTTCAGGGTCCGCCACGGATGCGTTCCGTTCTCGCGAGAGG
TGCACCGGGTACACCGGGGAGGGGGAAGACTTCCCCACGGCGACGCTGGA
AGAACAGATCGACCGTTACTTCTACGAAATCGTCGACGATGCCAGCACAA
CTACGGAGGGCACCCTAGACGCTGGAAGAACAGATCGACCGTTACTTCTA
CGAAATCGTCGACGATGCCAGCACAACTACGGAGGGCACCCTAGACTACA
CCCACGTTATTTTCATTGGGACAAACGAGCTGAACAGGGTAGTAGAGGCC
ATCACCCGCTACTCCATTGGAGGAGAGGGTTACGTAGACCCCGTGGCCTT
CGACAAGGTTTTCGAGGTTAACGCCACCACCGGGTTTCCAGTTCTCGACG
AAAGCGGCCTCCCGGTACCCACCTTCGCCCCCATGATCGAGACTACACCC
ACGTTATTTTCATTGGGACAAACGAGCTGAACAGGGTAGTAGAGGCCATC
ACCCGCTACTCCATTGGAGGAGAGGGTTACGTAGACCCCGTGGCCTTCGA
CAAGGTTTTCGAGGTTAACGCCACCACCGGGTTTCCAGTTCTCGACGAAA
GCGGCCTCCCGGTACCCACCTTCGCCCCCATGATCGAGGAAGTGCTCGGT
GCTTGGGATGAGGGGATCGGCAGGCTGATCGACGCTGGCGTCACCGGGAG
AATCCTCCTCGCCAACGTCGGATCTCCCAAGGGGCTGGCTGAAGTGCTCG
GTGCTTGGGATGAGGGGATCGGCAGGCTGATCGACGCTGGCGTCACCGGG
AGAATCCTCCTCGCCAACGTCGGATCTCCCAAGGGGCTGGCTGGTATTGC
CGGTACGGAAACCGCAACAGTTTTGGACCAGGTCGCCCTGTTCCTTCGCA
GCGGGGCCGAACTGTTGGTTGCCAAGTACGCTGGTCAAGTGCGAATGCTG
GACATGTACACTCTGTTCGCGGGTATTGCCGGTACGGAAACCGCAACAGT
TTTGGACCAGGTCGCCCTGTTCCTTCGCAGCGGGGCCGAACTGTTGGTTG
CCAAGTACGCTGGTCAAGTGCGAATGCTGGACATGTACACTCTGTTCGCG
GCGCTTATTGACGACGAGTCCATCTTCACGGACCTCGGCTTCACGCCCGG
AGAAGGATCCCTCTTGGCCGACAGCTGCATCCAGTTCAACTTCTTCGTGG
ACGACGCCGCCGAGATCATGGGGACGCAAGCCTTGCGCAACCCGGACTGC
CAGGATGAGTGCACGCTCTGCGCCGACTCGACCACCCCGTGCGCGACGTG
CTTGGTGGACCAGCCGGCCATCACCAAGTGCGACGACCCTTCGAACAAGG
TCTTCTACGACGGCATCCACTTCACCACAGACTTCCACCTCATCTTCGGA
GAGGCCATCAGGCAGTGCTCCAAGGACAGCCCCAACTTCGACCGCCCGTT
GGTGGGAGTTATGTGCCCGGAGGAGGAGTGGTACTAAGCGCTTATTGACG
ACGAGTCCATCTTCACGGACCTCGGCTTCACGCCCGGAGAAGGATCCCTC
TTGGCCGACAGCTGCATCCAGTTCAACTTCTTCGTGGACGACGCCGCCGA
GATCATGGGGACGCAAGCCTTGCGCAACCCGGACTGCCAGGATGAGTGCA
CGCTCTGCGCCGACTCGACCACCCCGTGCGCGACGTGCTTGGTGGACCAG
CCGGCCATCACCAAGTGCGACGACCCTTCGAACAAGGTCTTCTACGACGG
CATCCACTTCACCACAGACTTCCACCTCATCTTCGGAGAGGCCATCAGGC
AGTGCTCCAAGGACAGCCCCAACTTCGACCGCCCGTTGGTGGGAGTTATG
TGCCCGGAGGAGGAGTGGTACTAA