mRNA_E-siliculosus-1a_F_contig1506.2951.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI) HSP 1 Score: 675 bits (1742), Expect = 3.180e-243 Identity = 320/321 (99.69%), Postives = 320/321 (99.69%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHMNEYAECM 963
MYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKL TTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHMNEYAECM
Sbjct: 76 MYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHMNEYAECM 396
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 2.360e-156 Identity = 219/330 (66.36%), Postives = 260/330 (78.79%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDA-----------SPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHMNEYAE 957
+YVF+L+LHRW + KGD+ RASFGMC GP PGT+IVAGGTGVEMDSLRADVVEYN RTWT +LTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHY+NDLFEYNV +N+W++L T+GR PSPRYKHQAV VG KMYVIGGGCFKPEQS IDLYCLDL++LVWE ET MKG+LPKARVAHSCSFD IYLWGGFT ELSRL DF+ ++C +A W R+ E A +PPARAFHSA F G LY+FSGANGD+RY+DVWR+QVR +PPSL++L + + +SG L+ + + P E+++GV+ MNE+A+
Sbjct: 81 VYVFNLELHRWSKVTVKGDAPLPRASFGMCAGPAPGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWE--ETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGGATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKI--KSGGEAPLK-EMDMRAPAELVQGVREMNEHAD 405
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 427 bits (1097), Expect = 5.410e-145 Identity = 210/334 (62.87%), Postives = 251/334 (75.15%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAVPKGDSI-HARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPP--------------ARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLE-ESGLNTNLELKFKNKVPDEVIEGVKHMNEYA 954
MY FDL HRWE KGDS+ ARASFGMC GP T+IVAGGTGVEMDSLR+DV+E++TRT+ W+ + D E+ P +FYGQ+VC YG LLLFGGSTGLHY+NDLFEYN+ +N WRKLATTG++PSPRYKHQAV VGD MYVIGGGCFKPEQ++IDLY LDL+TLVW D M G++P+ARVAHSCSFDP IYLWGGFTGELSRL DF+ Y+ A W + DA+ P ARAFHSAVFHDGALY+FSGANGD+RYNDVWR++VR +PP+L VLA++ LL SG+ + L+ VP EV++GV +MNE A
Sbjct: 74 MYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVW--DTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLE--TFVPQEVLDGVLNMNESA 403
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 395 bits (1015), Expect = 1.690e-132 Identity = 194/345 (56.23%), Postives = 239/345 (69.28%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPG-TVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRL------VMEG----------GDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVL----------LEESGLNTNLELKFKNKVPDEVIEGVKHMNEYA 954
+Y FDL H+W G+ RASFGMC P+P +++VAGGTGVEMDSLRAD+VE++TRTR W V+TDSEETPC+FYGQS+CTYG++LLLFGGSTG+HY+NDL+EYN + RWRKL TTGRKP+PRYKHQAV VG MYVIGGGCFKPEQS+ID++ LDL TL W DE GD+PK+RVAHSC +D G I+LWGGFT ELSRL DFY +C++A WR V+ G PPARAFH+A F + ALY+FSGANGD+RY+DVWRYQ SPPSL VLA++++ + K +P EV + V H N++A
Sbjct: 65 VYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAW--DEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHA 407
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 394 bits (1013), Expect = 4.150e-132 Identity = 197/339 (58.11%), Postives = 237/339 (69.91%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAVPKGDSIH-ARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRL--------------------VMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHMNEYA 954
MY FDL H WE +G+ + ARASF MC GP T+IVAGGTGVEMDSLR+D+++++TRTR W + D ++ P KFYGQ+VC YGD LLLFGGSTGLHY+NDLFEYNV +N WRKL T GR+PSPRYKHQAV VGD MYVIGGGCFKPEQS+ID+YCL+L+TLVW + G +P+ARVAHSCSFDP IYLWGGFTGELSRL DFY Y+ + W + +P ARAFHSAVF+ GALY+FSGANGD+RYNDVWRY++R SPP+L VLA + LL S L + + +P EV++ V MNE A
Sbjct: 79 MYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPDEKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSA--GAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRALLH-SRLGVQQMMALEALLPHEVLDAVLTMNESA 414
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: A0A7S2XVZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ9_9STRA) HSP 1 Score: 272 bits (695), Expect = 2.290e-84 Identity = 132/312 (42.31%), Postives = 186/312 (59.62%), Query Frame = 1
Query: 7 VFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHM 942
VFD W +G+ HARASFGM +GP PGT+IVAGGTG +MD+ +D+ EYN + TW ++ + CK+YGQS+C Y NL FGGS G YSN L+ Y+ + TTG+ P PRYK Q + V D + VIGGG ++P ID++ LDL TL W +T G++P+ RVAH+C++D IYLWGGF L RL DF+V + + W ++ SP RAFH + HDG+ Y+F GA+GD R++DVWR++ +PPSL + + + + T + +P EV++G+K M
Sbjct: 80 VFDFSTQSWSAVQTRGEPPHARASFGMSRGPDPGTLIVAGGTGQDMDTF-SDIYEYNISSSTWRLLIKGEKANFCKYYGQSICEYKGNLFFFGGSRGRTYSNVLYRYDCAQEEGAAVPTTGKAPCPRYKQQMMVVKDSLLVIGGGNYRPPTHQIDVHELDLLTLNWSQWKTS--GNVPQGRVAHTCTYDENTHQIYLWGGFNVVLHRLNDFHVLDIATRKWSTIISLDNQ-SPRPRAFHCSCLHDGSFYIFGGADGDFRHSDVWRFRTNVTPPSLMSICAGTVAKSQSPKTAADETISQSLPHEVLDGIKQM 387
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: A0A836CMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ1_9STRA) HSP 1 Score: 248 bits (632), Expect = 9.240e-75 Identity = 123/267 (46.07%), Postives = 168/267 (62.92%), Query Frame = 1
Query: 70 RASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPV-GGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEES 867
R S MC G +++GG G + D LR+D+ ++TRTRTWT +L + P GQS C + +L FGGSTGL YSN+LF Y++ +NRW++LAT G +P+PRYKHQA D MYV+GGGCFKP D++ LDL T+ W T KG +P ARVAH+C++D GG +Y+WGGFT L L +FY + W + + SP AR+FH +VF G +Y+ SG+NG ++ DVWRY VR +PP L LA++ +L S
Sbjct: 26 RRSAAMCA-VGDGRFLLSGGAGDDPDHLRSDLYMFDTRTRTWTMLLEGDDAKPFCLCGQSACCWRGTVLFFGGSTGLEYSNELFSYDLRTNRWQQLATKGPRPTPRYKHQAFIHNDCMYVVGGGCFKPLCEDTDVHKLDLLTMEWTTVAT--KGAVPMARVAHTCAYDSTDGGAVYMWGGFTAGLQCLRNFYKLALDTHTWTSISPPRDEVSPSARSFHGSVFTRGCIYILSGSNGSEKFADVWRYAVRETPPPLLTLAARAVLANS 289
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: A0A7S2UXB8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB8_9STRA) HSP 1 Score: 246 bits (627), Expect = 2.540e-74 Identity = 127/315 (40.32%), Postives = 192/315 (60.95%), Query Frame = 1
Query: 1 MYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYN---DVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVK 936
M DL+ G RASF +C+GP GT+IVAGG G L +D++E++ + W ++ T+ CK YGQSV Y +L+ FGG+TG YSND+++++ + W L TTG +PSPRYK + V +G KM++IGGG F+P+ +S+D++CLDLKTL W E + G +P RVAH+C++D +YLWGG + + +LA+ +V + KS W V+ P RAFH FHDG+L++F G++ + R D+WRY R SPPSL+VLA+K L ++S +N + + +P E+++ +K
Sbjct: 88 MMAVDLETMECRDIHVTGVKPRPRASFAICEGPLDGTIIVAGGAGPNR-VLYSDILEFHVGSNKWRTLATEGTTPFCKCYGQSVRAYKSSLIFFGGTTGERYSNDVYQFDTRTGHWICLETTGNQPSPRYKQEMVIIGSKMFIIGGGNFRPKSTSMDMFCLDLKTLKWT--EVQTYGKIPSGRVAHTCAYDERDHKLYLWGGISIKRDQLAECFVLDMKSMIWS--VVPETSLKPGPRAFHCGKFHDGSLFIFGGSDLNSRSRPCFDIWRYNARCSPPSLSVLAAKAL-QKSKVNFDHSM-----LPKELLQLIK 391
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: A0A835Z314_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z314_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.050e-69 Identity = 127/305 (41.64%), Postives = 167/305 (54.75%), Query Frame = 1
Query: 4 YVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPG-TVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPD 915
Y F+L+ H+W+ + AR+SF MC P ++ VAGGTG + DSL D+VE++T RTW+ V+ D +TP YGQS C YG +L+LFGG++GL Y N G F P+ S +D+YCL+L TLVW+ T G+ P++RVAH+CSFD I +WGGF+ L RL DF++ +C +A W PP RAFH+A FH GALYLF GA+GD RYNDVWRY VR SPPSL VLA++ L G + KN + D
Sbjct: 69 YSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTS--GEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSN----QPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEGDDEKPVKPRKNHLSD 366
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Match: A0A7S2XUR3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUR3_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.260e-69 Identity = 109/267 (40.82%), Postives = 174/267 (65.17%), Query Frame = 1
Query: 145 DSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLATTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLEESGLNTNLELKFKNKVPDEVIEGVKHMN 945
+ L +D+ E++T +RTW + + + C+ YGQS C++ L+ FGGS+G YSN+ ++V +W K++TTG KP+PRYKHQAV VG M+++GGG ++P + +D++ L+LKTL W+ E + G P+ARVAH+C +DP+ IY+WGGF G L RL DFY + + W + G P ARAFH++ +G+LY+F GA+G R+ DVW+YQ PSL VLA++ ++ + +++ + + +PDEV++G++ +N
Sbjct: 2 EELCSDLFEFSTLSRTWRRLASSAF---CRLYGQSCCSFESKLIFFGGSSGKQYSNETVFFDVKQMKWEKISTTGPKPTPRYKHQAVVVGHSMFILGGGNYRPARDKMDVHMLNLKTLEWQ--EVKCTGMPPEARVAHTCQYDPLSNTIYVWGGFNGRLVRLKDFYALDLGTMKWDSIHCSTG--CPSARAFHASCLCEGSLYIFGGADGHKRHADVWKYQFHLRIPSLMVLAAQSVVNKV---SDVRDTYGDILPDEVVDGIEKIN 258 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1506.2951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1506.2951.1 >prot_E-siliculosus-1a_F_contig1506.2951.1 ID=prot_E-siliculosus-1a_F_contig1506.2951.1|Name=mRNA_E-siliculosus-1a_F_contig1506.2951.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=322bp MYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPGTVIVAGGTGVEMDSback to top mRNA from alignment at E-siliculosus-1a_F_contig1506:28099..30472+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1506.2951.1 ID=mRNA_E-siliculosus-1a_F_contig1506.2951.1|Name=mRNA_E-siliculosus-1a_F_contig1506.2951.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2374bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1506:28099..30472+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1506:28099..30472+ >mRNA_E-siliculosus-1a_F_contig1506.2951.1 ID=mRNA_E-siliculosus-1a_F_contig1506.2951.1|Name=mRNA_E-siliculosus-1a_F_contig1506.2951.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1932bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1506:28099..30472+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |