mRNA_E-siliculosus-1a_F_contig1505.2943.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1505.2943.1
Unique NamemRNA_E-siliculosus-1a_F_contig1505.2943.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: D7FK62_ECTSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK62_ECTSI)

HSP 1 Score: 613 bits (1581), Expect = 5.790e-213
Identity = 327/352 (92.90%), Postives = 328/352 (93.18%), Query Frame = 2 
Query:  101 MNLAMRGSPLSSGAIRRLARAPTPSLQSAPRLSTACGFTPTSASRLSAAASRRPCPFRHGSRRPASTTIGSGDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRGKGGEAPR 1156
            MNLAMRGSPLSSGAIRRLARAPTPSLQSAPR STACGFTPTSASRLSAAAS RP PF+HGSRRPASTTIGSGDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPP       XXX              RRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRGKGGEAPR
Sbjct:    1 MNLAMRGSPLSSGAIRRLARAPTPSLQSAPRFSTACGFTPTSASRLSAAASPRPSPFQHGSRRPASTTIGSGDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPAPTTTPSXXXSSGSGRK-------RRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRGKGGEAPR 345
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: A0A6H5K3Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y3_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 2.090e-90
Identity = 162/241 (67.22%), Postives = 164/241 (68.05%), Query Frame = 2 
Query:  413 MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRG 1135
            MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMR                    G    KW                                                     RGSREVLARTF+PWA+RAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRG
Sbjct:    1 MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRS------------------GGGGGGKW-----------------------------------------------------RGSREVLARTFIPWAVRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRG 170
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: A0A835Z0M6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M6_9STRA)

HSP 1 Score: 256 bits (654), Expect = 5.160e-76
Identity = 135/270 (50.00%), Postives = 173/270 (64.07%), Query Frame = 2 
Query:  320 STTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQ 1129
            ST+++ +A+G   KR+LY GH P SP QR  +   +  +A  DPERADMVA LGE TG  AL+Q++  ML DP+G E+LR RP ++E +VDL AL  LP GT GK+Y++FM  N F+PD R PV++VDD DLAYVM RYR+VHDLWH L+GLP ++EGE+ALKWFE+VQTGLPV A+SA++G   +P                              R  R  L +  VPWAIRAGRR+  PL+ VWYE+ W+  L   R  L  E APQ
Sbjct:    7 STSSSKSAAGEPCKRILYKGHNPISPSQRVGLTFISAFSAFADPERADMVAALGETTGHRALKQMHHRMLQDPDGIELLRERPQLDEHSVDLEALGQLPSGTFGKAYADFMAHNQFTPDSRLPVRFVDDADLAYVMARYRQVHDLWHVLSGLPPSLEGEIALKWFEMVQTGLPVAAISALVGAARVP------------------------------REGRAALRQKLVPWAIRAGRRSV-PLMNVWYERYWDMYLSNFREKLKFEPAPQ 245
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: A0A6T5QVX1_HETAK (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QVX1_HETAK)

HSP 1 Score: 238 bits (608), Expect = 4.480e-69
Identity = 128/253 (50.59%), Postives = 158/253 (62.45%), Query Frame = 2 
Query:  368 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAP 1126
            LY  HQPTS  Q+  +A ++ + AL DPERADMVA L E TG +AL  L   M ADP G++IL  +P+++E TV+L  L +LP GT G +Y  FM  N FSP+GR+PV++VDD +LAYV+ RYR+VHDLWHAL GLP TV GELALKW EL+QTGLPV ALSA  GPLAL   +                              R +L R ++PWA+RA    R PL+CV YE  W +PL  VR  LGV  AP
Sbjct:   32 LYPTHQPTSTFQKGFLAVYSALVALNDPERADMVAVLSETTGEIALRNLRDVMKADPVGQQILLEKPILDETTVNLENLGSLPRGTFGHAYYTFMDGNGFSPEGRAPVRFVDDAELAYVLLRYRQVHDLWHALFGLPPTVGGELALKWLELLQTGLPVAALSAAAGPLALAPAD------------------------------RALLRRVYLPWALRAHGALRAPLMCVRYEALWGEPLAAVRARLGVLPAP 254
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: W7U2W9_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W9_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.470e-68
Identity = 122/253 (48.22%), Postives = 164/253 (64.82%), Query Frame = 2 
Query:  368 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAP 1126
            LYS H PTS  Q+  +AG++  TA  DPER DMVA LGE TG  AL++L R+M ADP GRE+L A+P I E +     L  LP+GT G+ Y+ F+  + +SPD R+ V++VDD +LA+VM+RYR+VHD WH L GLP TV GELALKWFE+VQT LP+ A S V+GPL+L ++E                              R++L   ++PWA+RA  +AR PL+CVWYE+ +E+PLEL+R+ L +  AP
Sbjct:   84 LYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQE------------------------------RKLLKEQYIPWAVRAAVKAR-PLMCVWYERSFEEPLELMRKRLQIVTAP 305
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: A0A7L4GM74_PODST (COQ4 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L4GM74_PODST)

HSP 1 Score: 226 bits (577), Expect = 1.160e-64
Identity = 118/253 (46.64%), Postives = 156/253 (61.66%), Query Frame = 2 
Query:  368 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAP 1126
            LY GH PTSPLQ+  +A  + VTAL DP R DMVA LGE TG LAL  L   M   PEG  IL+ RP I  +T+D+A L  LPDG+LG+ Y  F+++N  SPD R P K+VDD +LAYV++RYREVHDL H L G+P  + GE+ +KWFE +QTGLP+C L A  GP+ L +++                               +VLA   VPWAIR+GR A   ++ ++YE+RWEQP+E +R ++G+   P
Sbjct:   43 LYPGHIPTSPLQKALLAAGSAVTALCDPYRHDMVAVLGETTGCLALPHLRDKMKRHPEGHRILQERPRIRLSTLDMARLRGLPDGSLGREYVRFLEDNKVSPDTRMPTKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAIQTGLPMCVLGAAFGPVRLSARK------------------------------LQVLATELVPWAIRSGRNAS-CILNIYYEQRWEQPVESLREEIGIFPPP 264
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: A0A151MFC8_ALLMI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=4 Tax=Crocodylia TaxID=1294634 RepID=A0A151MFC8_ALLMI)

HSP 1 Score: 224 bits (571), Expect = 4.450e-64
Identity = 115/253 (45.45%), Postives = 157/253 (62.06%), Query Frame = 2 
Query:  368 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAP 1126
            LY GH PTSPLQ+  +A  + + AL DP R DMVA LGE TG LAL++L   M  D EG +ILR RP I  +T+D+A L  LPDGT G+ Y  F+++N  SPD R P K+VDD +LAYV++RYREVHDL H L G+P  + GE+ +KWFE VQTGLP+CAL AV GP+ L +++                               +VL    +PWA+++G RA   ++ ++YE+RWEQ +E +R ++G+   P
Sbjct:    9 LYPGHVPTSPLQKVLLAAGSALAALRDPYRHDMVAVLGETTGSLALQRLRDKMRHDAEGYQILRERPRIRLSTLDVAGLRGLPDGTFGREYMRFLEDNRVSPDTRMPAKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCALGAVFGPIRLKARK------------------------------LQVLTTELIPWAVQSGLRAN-CILNIYYERRWEQTVESLREEIGILPPP 230
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: A0A1Y1YE21_9FUNG (Ubiquinone biosynthesis protein COQ4, mitochondrial n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YE21_9FUNG)

HSP 1 Score: 225 bits (573), Expect = 4.920e-64
Identity = 120/254 (47.24%), Postives = 157/254 (61.81%), Query Frame = 2 
Query:  368 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQ 1129
            LY GH PTSPL++ A++  A  TAL +P R DMVA LGE TG + L ++   ML DP GR ILR RPV+N  T++L  L  LPDGT G+ Y  ++ E   +PD R+PV YVDDP+LAYV+RRYRE HD +HALTG+  +VE ELALKWFE  QTGLP+  L +V GPL LPS E                              R+ L   +VPWAIR G  A+  L+ V YE+ +++PL+  R++LG+ + P+
Sbjct:   45 LYEGHIPTSPLEKGALSVKAAFTALFNPLRGDMVAVLGETTGSMVLARIRDKMLLDPVGRRILRERPVLNSKTLNLPGLRTLPDGTFGREYVRWLDEQQVTPDTRAPVHYVDDPELAYVIRRYRETHDFYHALTGIGISVEDELALKWFEFAQTGLPMTLLGSVFGPLRLPSVE------------------------------RKHLFEVYVPWAIRCGSNAKF-LMNVMYEESFDKPLDEFRKELGIYLPPK 267
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: K3XAS5_GLOUD (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAS5_GLOUD)

HSP 1 Score: 225 bits (574), Expect = 5.650e-64
Identity = 125/262 (47.71%), Postives = 161/262 (61.45%), Query Frame = 2 
Query:  341 ASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAP 1126
            A+G   KRVLY  H PTSP+Q+  ++ ++ ++   DPER DM+A LGEVTGR AL Q++  M +DP G  IL  RP I    +D+  L ALP  T G +YS FM  + F  DGR+ VKYVDD +LAYVM+R+RE+HD WH L GLP TV GE+ALK+ EL+QT LPVCALS  +GPL L S+E                              R VL R ++PWA RAGR A   L+ V YE+ +E PLE +R+ L +E+AP
Sbjct:   44 AAGEPQKRVLYDTHMPTSPVQKVFLSVFSALSVFTDPERGDMLALLGEVTGRDALRQVHAKMCSDPVGVRILTERPSIRSDQIDMTYLRALPKHTFGYAYSQFMDSHGFEADGRAYVKYVDDEELAYVMKRHRELHDFWHVLFGLPPTVFGEIALKYVELLQTKLPVCALSGFVGPLRLTSEE------------------------------RRVLVRDYIPWANRAGRNAHF-LLSVMYEEEFETPLEELRQRLRIEVAP 274
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BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Match: A0A7K5FGZ4_PROAR (COQ4 protein (Fragment) n=1 Tax=Probosciger aterrimus TaxID=141839 RepID=A0A7K5FGZ4_PROAR)

HSP 1 Score: 224 bits (570), Expect = 7.010e-64
Identity = 118/253 (46.64%), Postives = 155/253 (61.26%), Query Frame = 2 
Query:  368 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXXXXXXXRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAP 1126
            LY GH PTSPLQ+  +AG + V AL DP R DMVA LGE TG LAL  L   M   PEG  ILR RP I  +T+D++ L  LPDG+LG+ Y  F+++N  SPD R P K+VDD +LAYV++RYREVHD+ H L G+P  + GE+ +KWFE +QTGLP+C L A  GP+ L +++                               +VLA   VPWAIR+GR A    + V+YE+RWEQP+E +R ++G+   P
Sbjct:   27 LYPGHIPTSPLQKALLAGGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKHHPEGYRILRERPRIRLSTLDMSRLQGLPDGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDVMHTLLGMPTNMLGEVVVKWFEAIQTGLPMCVLGAAFGPIRLSARK------------------------------LQVLATELVPWAIRSGRNAS-CFLNVYYEQRWEQPVESLREEIGIFPPP 248
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1505.2943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK62_ECTSI5.790e-21392.90Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6H5K3Y3_9PHAE2.090e-9067.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z0M6_9STRA5.160e-7650.00Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6T5QVX1_HETAK4.480e-6950.59Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
W7U2W9_9STRA2.470e-6848.22Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7L4GM74_PODST1.160e-6446.64COQ4 protein (Fragment) n=2 Tax=Neognathae TaxID=8... [more]
A0A151MFC8_ALLMI4.450e-6445.45Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A1Y1YE21_9FUNG4.920e-6447.24Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
K3XAS5_GLOUD5.650e-6447.71Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7K5FGZ4_PROAR7.010e-6446.64COQ4 protein (Fragment) n=1 Tax=Probosciger aterri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1505contigE-siliculosus-1a_F_contig1505:22906..27925 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1059
Model size2474
Exons5
Ec32 orthologEc-04_005680.1
Ec32 ortholog descriptionUbiquinone biosynthesis protein Coq4
Hectar predicted targeting categorymitochondrion
BRITEko00000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.H
EggNOG OGsCOG5031@1,KOG3244@2759
EggNOG free text desc.ubiquinone biosynthetic process
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0019866,GO:0019898,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663
KEGG koko:K18586
Preferred nameCOQ4
Seed eggNOG ortholog2880.D7FK62
Seed ortholog evalue9.4e-176
Seed ortholog score622.9
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928016.6843047-UTR-E-siliculosus-1a_F_contig1505:22905..242201622928016.6843047-UTR-E-siliculosus-1a_F_contig1505:22905..24220Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1505 22906..24220 -
1696318773.6919794-UTR-E-siliculosus-1a_F_contig1505:22905..242201696318773.6919794-UTR-E-siliculosus-1a_F_contig1505:22905..24220Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1505 22906..24220 -
1622928016.7642417-UTR-E-siliculosus-1a_F_contig1505:27825..279251622928016.7642417-UTR-E-siliculosus-1a_F_contig1505:27825..27925Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1505 27826..27925 -
1696318773.7383795-UTR-E-siliculosus-1a_F_contig1505:27825..279251696318773.7383795-UTR-E-siliculosus-1a_F_contig1505:27825..27925Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1505 27826..27925 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928016.7000992-CDS-E-siliculosus-1a_F_contig1505:24220..246471622928016.7000992-CDS-E-siliculosus-1a_F_contig1505:24220..24647Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 24221..24647 -
1696318773.701208-CDS-E-siliculosus-1a_F_contig1505:24220..246471696318773.701208-CDS-E-siliculosus-1a_F_contig1505:24220..24647Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 24221..24647 -
1622928016.7159011-CDS-E-siliculosus-1a_F_contig1505:25495..256201622928016.7159011-CDS-E-siliculosus-1a_F_contig1505:25495..25620Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 25496..25620 -
1696318773.7084873-CDS-E-siliculosus-1a_F_contig1505:25495..256201696318773.7084873-CDS-E-siliculosus-1a_F_contig1505:25495..25620Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 25496..25620 -
1622928016.7259877-CDS-E-siliculosus-1a_F_contig1505:25983..260711622928016.7259877-CDS-E-siliculosus-1a_F_contig1505:25983..26071Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 25984..26071 -
1696318773.7159767-CDS-E-siliculosus-1a_F_contig1505:25983..260711696318773.7159767-CDS-E-siliculosus-1a_F_contig1505:25983..26071Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 25984..26071 -
1622928016.7382545-CDS-E-siliculosus-1a_F_contig1505:26416..268161622928016.7382545-CDS-E-siliculosus-1a_F_contig1505:26416..26816Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 26417..26816 -
1696318773.7234943-CDS-E-siliculosus-1a_F_contig1505:26416..268161696318773.7234943-CDS-E-siliculosus-1a_F_contig1505:26416..26816Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 26417..26816 -
1622928016.7535596-CDS-E-siliculosus-1a_F_contig1505:27806..278251622928016.7535596-CDS-E-siliculosus-1a_F_contig1505:27806..27825Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 27807..27825 -
1696318773.7308304-CDS-E-siliculosus-1a_F_contig1505:27806..278251696318773.7308304-CDS-E-siliculosus-1a_F_contig1505:27806..27825Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1505 27807..27825 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1505.2943.1prot_E-siliculosus-1a_F_contig1505.2943.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1505 24221..27825 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1505.2943.1

>prot_E-siliculosus-1a_F_contig1505.2943.1 ID=prot_E-siliculosus-1a_F_contig1505.2943.1|Name=mRNA_E-siliculosus-1a_F_contig1505.2943.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=353bp
MNLAMRGSPLSSGAIRRLARAPTPSLQSAPRLSTACGFTPTSASRLSAAA
SRRPCPFRHGSRRPASTTIGSGDSTTANTTASGPAAKRVLYSGHQPTSPL
QRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGRE
ILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYV
DDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCAL
SAVLGPLALPSKEPPPAPTATPSSTDSSNSSSGGGGGGKRRGSREVLART
FVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQRGKGGEA
PR*
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mRNA from alignment at E-siliculosus-1a_F_contig1505:22906..27925-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1505.2943.1 ID=mRNA_E-siliculosus-1a_F_contig1505.2943.1|Name=mRNA_E-siliculosus-1a_F_contig1505.2943.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5020bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1505:22906..27925- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGACAATCGGCTTGGTCAACACGGAGGCACGACCGCAAGACCCTCCCTGC
AATCACAAGCTTGGAGCTCGCTGTCAAGAGCGTTTGGGCTGGTTTCATCA
ATGAACTTGGCCATGAGAGGTATGCATATCATGATGTTTACCTCATGGAG
ACAGCAGAGTGCAAAGCACTGCTGTAGTCTTGACAAAATGTCTGTTTTCC
GCACCGTAGTCGTCACCGATGCTCCGCTGTGCGCTGTGTGGAACGCGTGT
GGGAAACCTAAACCTTGGTCTGCCATGCTTGTGTGAGGTGGTACTCTGTG
TGATACACTGCTGTGTGATGCCTTTGTGCCTCTCCTTGGCCTGGGACTTG
CTGCATACTTATCGCCCTGCCTCGTGTCCCCTTTACAAAGGAAACTTTGT
ACAGAGGTAACTTGTGCAAAGCATGCTGGACGGCTGGACTGGAAAAAATT
GCTGACTTGGCTTCAGTATAGAACGTTTGGGACTTGTCCCCAAAATGTGT
CCCCAAAATGCATTTTGGAACATGTCCCCAAAAGCATCTTGGGGCACTTT
CCACTTTCCACTTTCGGAAGCCACCCCCAGCCTTCGTCCCTCGGGACTGT
ACAGCCTCTCCCAATGAGCGGACGGAGGAGGGTTATTTACGCCGCATCCT
GTGTTTCGCCGTTGTAAAACTTGCACAAACTTGCGAGGGATCGAGGGATA
CCTTGCTTGCAGCCTACCACAAGAGTCAGGAAGGGGTACGACATTCGCAG
GCAATACCAGCAAGATGACTTGCTTCTCCACTGCGCTCTGTGTTCGCGTT
GCATATTGACCGACATGCCCTGTGAAAGAGGGACTCTGCTGACACAGAAT
ACTGCTGTACACAGGGGACAGCCACCGAGTTTTTCGCGCTCAATCTGTAC
AATACATGCGAAAACTTCACGATTGTGTCCATTTCCCCCCTGATCTACGC
GAAGACTTGCAACCCCCGAGTTGTCGATGTCAATCTACTGTGTGTTTAAC
CCCCCTGCTGCTGCTGTTGTCCACGCTCATTCATGGTGAAAGATTTCCCC
TGTTTTTGTTGGTCCCTCTTCGATGACGAACACACGCTCATTCGCTTGTC
CTTCAAAAGGTTCCCCTCTCAGCTCCGGAGCCATCCGCCGGCTGGCAAGA
GCACCAACGCCATCCCTTCAATCAGCGCCGCGATTGTCAACGGCGTGCGG
CTTCACCCCGACTTCGGCGAGCCGACTCTCCGCCGCGGCCTCGCGAAGAC
CTTGTCCGTTTCGGCACGGTTCGCGACGCCCCGCCTCGACCACGATCGGT
AGCGGTGACAGCACCACCGCGAACACCACGGCTTCGGGGCCGGCGGCCAA
GAGGGTGTTGTACAGCGGGCACCAGCCCACGTCCCCCCTGCAGCGGACGG
CCATGGCCGGCTGGGCGACGGTGACCGCGCTCATGGACCCCGAGCGGGCG
GACATGGTGGCGACCCTGGGAGAGGTGACGGGCAGGCTGGCCCTCGAGCA
GCTCTACAGGTGTGGTGAAAGAAAAAAAAGGAAACGTTGAAACAAACATT
GATATTTGTCCCCACAAGCAGTGTCTCCGGTTCTGGGCTCTCCCCTATTG
TGTTGTAGTTCGATTCTCTTGCGACAGCGCTCTCAACATGGCAAGACTCG
ACACGTTTCGTCTCTCGGCAGAGCTCCGTCGTCGTCTTTCCTCCCCTCTT
CTATAGGCAAATGCCGACAATGAAGCAGGTTTTGCATGCAGAGTGAGAGC
GGTCGCCGCTGTTGACTGTAGTTATCAGAGCGCCCCCGTCATCCACGACA
CCCGAGGTTGCTTCTCACTCACAACCGCGGCGACCAACCTTCCGACCTTT
TTAGGTCCATGCTGGCTGACCCAGAAGGGCGGGAGATCCTCCGGGCGAGA
CCGGTTATCAACGAAGCCACGGTTGACCTGGCCGCGCTTGCGGTGAGTGC
CTAAACGACGACATGGCATGTCCTGTGGTCGAGGGCTCTTGGCTTGACAG
AGGGCCGCTGAGAGAGAGAGACAGAGAGAGAGAGAGACAGAGAGAGAGAG
AGTTAGAGATGGAGAGAGAGTTAGAGATAGAGAGATAGGGGAGAGAGGGA
CAGAGAGAGAGAGAGCTGGCAGGGACGGGCAACTAACTCCAACGCCTTCG
CGGATGTCCATGAGCTTTTCTCTTACACTTCGACCGTTTTTCTCTCTGGC
TCACCGCGTTTACAGCAGTGTCTTCTCACTCCTCCCTTCTTGCCTTACAC
CCGTGCGTGCGCCAACGTTTTCCCGTTGGTTGTTGTTTTGGTTCAACGTC
GACAGGCCCTTCCCGACGGCACCTTGGGGAAGAGCTACTCCAACTTCATG
AAGGAGAACAACTTTTCTCCCGATGGTCGCAGCCCGGTGAAGTACGTGGA
CGACCCGGACCTGGCGTACGTGATGCGCAGGTAACAAAGCCCAACAGAGA
CACGGCACTCGTCTGGTGGATGGTAGTTATCGACGGCAACAAACACTGCC
GGAGAGCACGGCAATACTACGTGCAAAATTGGTGGGATGGGGCAGTTTTG
TATGCTGTGTTGGCGGGAAGGCTCCCCCTGTGGAACGGGCGGCTCGTACG
GTGCAATTATTTAGTGAATCGCCGTACAACGTGGTGGGTATACACCAACG
TGAGGAGTTTCGTAGCTCGCTCGCAAGAGTGCCAGAGGGAATCAATCTTC
AACGGGGGTCCAAAAGCTTGCAACGGTAGCGGCGGAGGCGGTGACGGCGC
GGAGATGCTCTCTGCCTTTGAGCCACGCGGAACTCGATACCGCAGGTCTT
TTTTTTTTTTGTTCAGAGATCGACGGCTCGGTGTGGCAACATCGCCATGC
CATGTTCGCCTGAGAATACACCAACTGCCAGCGCTTTTGTGACTTGTGTC
CCCAGGAGGACACAGATAAAGTAAAACATATGAACACCGGAGCGATTGTG
TCGCTCCTACCCTCTTCCCTCCCTTGCGCTACAGACCCGGGTATGTAGCG
CTCGAGTACTGACAGACGCGGTGCGTACGTGGAATACAGGCGGCGCGTCT
TTTCCGGAATTCACGCCTGGTCAACCAACGGTCTAATGAGTGAAACATGG
CCTAACAACTACCCCTTCCCCCGCCCCTCCCGGAACGATTGGTCATCGGC
GATCGGTCCTGTGGGAACAATGCTCCGTCCGTCTTCTCTCGAGGCTGCGT
GTTTCAATGGTCTAACCGCTAAGACATGAGTACCCGCCCCCCCGCCCCCC
CCCCCTCCACTGCTGTGCCCCTTCTCAGATACCGAGAGGTCCACGACCTG
TGGCACGCGCTCACCGGTCTTCCCGCGACGGTCGAGGGAGAGCTGGCGCT
GAAGTGGTTCGAGCTCGTGCAAACGGGGCTGCCCGTGTGCGCCCTGTCGG
CGGTGCTGGGGCCCCTCGCCCTCCCAAGCAAAGAGCCCCCGCCGGCACCA
ACAGCAACCCCCTCTTCCACCGACAGCAGCAACAGCAGCAGCGGCGGCGG
CGGTGGCGGGAAGCGACGGGGGAGCCGTGAGGTGCTGGCGCGTACGTTCG
TCCCGTGGGCCATCAGGGCGGGGAGGAGAGCCCGAAGGCCCCTGGTGTGC
GTGTGGTACGAGAAGCGGTGGGAGCAGCCGCTGGAGCTGGTGCGGAGGGA
CCTGGGGGTGGAGATGGCGCCGCAGAGAGGGAAGGGCGGCGAGGCTCCGC
GGTAGCGTAGTTATTACTGCAGCTGCTGTCGCGGGCGGAGTTGAACGACA
GATCAATCCCTTCTTTGTGGTGCTTGGATCTCAGTCCGATCTGTGCGTCA
TCTGTGGGAGAAACGCGTGTGGGAAGTATGTGTGTGATGGGTATGTACGC
GGTTAAGGTCCAAGTGCGTGCCCCCCGGGAGAGCACACGCCGGTGTGCTC
CTGTTACTTGCCTATGGGTTGACCGTTCCTTGTTGTAGATGTAGTTGGTG
TGTGTGTGTGTCAACCCGCTTGCCTGTACGGGGCGTGCTTGTGTTATTGT
AAACCATGATTGCCGTTCATCTGCCGTTCCTGGGATAACTGAGTACCCAG
TCTCAACACCAACCGCTGAGGGCGGTATCGCCACGAACACCTACCCTTAT
CCCCGGTGAACAAAGAGGGGCGGCTGCTTGAGAGGGAATCAAGGGCCTGC
CCGAAAGGACGACCCATCACTCTCATGCCAGTGGAATAGAGCGTGTTTCG
GCGGCGTTTTCTTTTTTTGTCAGCCATCGGTTGCTCAAGAAAGCGTAGGA
GATAATTTCTGTCGCGACAGCGGCTTCGTGGAAGCGGTTGCTTCGACTCT
GTATTGATGATGTTCTCGATCTCAGCGTTCGTGCTATGGCGTTCACGATG
TACGGCAGTAGGGGGAGCTCCCGAAAGGGGGAACGTTTGCAACGCAAGGC
CCTGGCGCCGCAGCAGCGCGTTCGCCAGATGGCTCATACCAATAGAGCGG
GATGCCGTAATCGTCGGAGTTTCCCCCGCTCACCCCCCCCAGCTATCGGG
GTTGGGTTTTCGTCGCTTGTTACGACGCCGAAATATCGGCAAGCATGGGA
GGGATAACAGCAAAGTCCCATAAGGAGAGTCTACGTATCGTAGGAGTTTT
TATTTGGGCGTGGCTGCCGCAGGATTAGCCAGCTCCAGGGACATACATGT
GTTCGGGGGGCATCTACTACTAGGGGTGGGGTAACCCTGTTGTTTTGTCC
TGCGCGAGTGTCAGTACCGTAAATGTGCGTGTCATGACGCCCATCGTTGA
TTCGGTATCGGTGTTCACGCACCCGGTGCGACATGTAAAACCTGCTTGGA
ACAGGTATGTAACGCACGGCTGGTAGGTATCAATTGGGGCGCCATTCCTT
TCGTGCGACGGCGGTTGTGAAAGTGTTGTTGTCGTTCGGGCCACCCACAG
GAAATACCTGCTTGGTAAGGAACGCCCGCGAGGGAGACCAAAAACAATAA
AACAGCGTTGGACGGTAATATTTTTGCCTCTGCCTCTGGAGCATGCATGC
CCTCGCTCGCGATCTGGAAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1505:22906..27925-

>mRNA_E-siliculosus-1a_F_contig1505.2943.1 ID=mRNA_E-siliculosus-1a_F_contig1505.2943.1|Name=mRNA_E-siliculosus-1a_F_contig1505.2943.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2118bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1505:22906..27925- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAACTTGGCCATGAGAGATGAACTTGGCCATGAGAGGTTCCCCTCTCA
GCTCCGGAGCCATCCGCCGGCTGGCAAGAGCACCAACGCCATCCCTTCAA
TCAGCGCCGCGATTGTCAACGGCGTGCGGCTTCACCCCGACTTCGGCGAG
CCGACTCTCCGCCGCGGCCTCGCGAAGACCTTGTCCGTTTCGGCACGGTT
CGCGACGCCCCGCCTCGACCACGATCGGTAGCGGTGACAGCACCACCGCG
AACACCACGGCTTCGGGGCCGGCGGCCAAGAGGGTGTTGTACAGCGGGCA
CCAGCCCACGTCCCCCCTGCAGCGGACGGCCATGGCCGGCTGGGCGACGG
TGACCGCGCTCATGGACCCCGAGCGGGCGGACATGGTGGCGACCCTGGGA
GAGGTGACGGGCAGGCTGGCCCTCGAGCAGCTCTACAGGTTCCCCTCTCA
GCTCCGGAGCCATCCGCCGGCTGGCAAGAGCACCAACGCCATCCCTTCAA
TCAGCGCCGCGATTGTCAACGGCGTGCGGCTTCACCCCGACTTCGGCGAG
CCGACTCTCCGCCGCGGCCTCGCGAAGACCTTGTCCGTTTCGGCACGGTT
CGCGACGCCCCGCCTCGACCACGATCGGTAGCGGTGACAGCACCACCGCG
AACACCACGGCTTCGGGGCCGGCGGCCAAGAGGGTGTTGTACAGCGGGCA
CCAGCCCACGTCCCCCCTGCAGCGGACGGCCATGGCCGGCTGGGCGACGG
TGACCGCGCTCATGGACCCCGAGCGGGCGGACATGGTGGCGACCCTGGGA
GAGGTGACGGGCAGGCTGGCCCTCGAGCAGCTCTACAGGTCCATGCTGGC
TGACCCAGAAGGGCGGGAGATCCTCCGGGCGAGACCGGTTATCAACGAAG
CCACGGTTGACCTGGCCGCGCTTGCGGTCCATGCTGGCTGACCCAGAAGG
GCGGGAGATCCTCCGGGCGAGACCGGTTATCAACGAAGCCACGGTTGACC
TGGCCGCGCTTGCGGCCCTTCCCGACGGCACCTTGGGGAAGAGCTACTCC
AACTTCATGAAGGAGAACAACTTTTCTCCCGATGGTCGCAGCCCGGTGAA
GTACGTGGACGACCCGGACCTGGCGTACGTGATGCGCAGGCCCTTCCCGA
CGGCACCTTGGGGAAGAGCTACTCCAACTTCATGAAGGAGAACAACTTTT
CTCCCGATGGTCGCAGCCCGGTGAAGTACGTGGACGACCCGGACCTGGCG
TACGTGATGCGCAGATACCGAGAGGTCCACGACCTGTGGCACGCGCTCAC
CGGTCTTCCCGCGACGGTCGAGGGAGAGCTGGCGCTGAAGTGGTTCGAGC
TCGTGCAAACGGGGCTGCCCGTGTGCGCCCTGTCGGCGGTGCTGGGGCCC
CTCGCCCTCCCAAGCAAAGAGCCCCCGCCGGCACCAACAGCAACCCCCTC
TTCCACCGACAGCAGCAACAGCAGCAGCGGCGGCGGCGGTGGCGGGAAGC
GACGGGGGAGCCGTGAGGTGCTGGCGCGTACGTTCGTCCCGTGGGCCATC
AGGGCGGGGAGGAGAGCCCGAAGGCCCCTGGTGTGCGTGTGGTACGAGAA
GCGGTGGGAGCAGCCGCTGGAGCTGGTGCGGAGGGACCTGGGGGTGGAGA
TGGCGCCGCAGAGAGGGAAGGGCGGCGAGGCTCCGCGGTAGATACCGAGA
GGTCCACGACCTGTGGCACGCGCTCACCGGTCTTCCCGCGACGGTCGAGG
GAGAGCTGGCGCTGAAGTGGTTCGAGCTCGTGCAAACGGGGCTGCCCGTG
TGCGCCCTGTCGGCGGTGCTGGGGCCCCTCGCCCTCCCAAGCAAAGAGCC
CCCGCCGGCACCAACAGCAACCCCCTCTTCCACCGACAGCAGCAACAGCA
GCAGCGGCGGCGGCGGTGGCGGGAAGCGACGGGGGAGCCGTGAGGTGCTG
GCGCGTACGTTCGTCCCGTGGGCCATCAGGGCGGGGAGGAGAGCCCGAAG
GCCCCTGGTGTGCGTGTGGTACGAGAAGCGGTGGGAGCAGCCGCTGGAGC
TGGTGCGGAGGGACCTGGGGGTGGAGATGGCGCCGCAGAGAGGGAAGGGC
GGCGAGGCTCCGCGGTAG
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