mRNA_E-siliculosus-1a_F_contig1504.2937.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: D7FVZ6_ECTSI (C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ6_ECTSI) HSP 1 Score: 1083 bits (2800), Expect = 0.000e+0 Identity = 549/593 (92.58%), Postives = 563/593 (94.94%), Query Frame = 1
Query: 1 MGEPGDRPERQPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKPDWFVGSIYHLEPPXXXXXXADGDMVVERGQDGGIPAANAAGSDQRCRGTAEGAEATTTPTVIETPTEVLGVPEREVPATAVCTNIEGKSLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFCSGGRGAADRVAMA 1779
MGEPGD P+RQPCRILILGDGNFSFSLALAKALLLPPTPH+ PSSPQARLQQQTFEIVATSFDGRLDLLSKY EAPGIVAALRS+GVTVLHNVDATALDSRVL+VSPSDR R QQ QQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSA+ S GPVG GGSGACGVSDIGGGGAVAAVPGMADRQ G GAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRR FPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAA+GDDGAAFGSTLPPWLW EV ++ GDEAS ARAETATDE VRAGGSDAV+APTPAVDDNVR RGG RKGGGCTDRTGA AA+ALLPEVCELCGK+YKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHP+CGRVFTSDRALDQHVSAKH GDNVDIKPDWFVGSIYHLEPPXXXX DGDMVVERGQDGGIPAANAAGSDQ CRGTAEGAEATTTP V+ETP E+LGVP REVPAT VCTNIEG SLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFCSGGRGAADRVAMA
Sbjct: 1 MGEPGDGPKRQPCRILILGDGNFSFSLALAKALLLPPTPHLLPSSPQARLQQQTFEIVATSFDGRLDLLSKYAEAPGIVAALRSVGVTVLHNVDATALDSRVLQVSPSDRRRAQQQQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAIGSTGPVGGGGSGACGVSDIGGGGAVAAVPGMADRQGGKGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRRFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAARGDDGAAFGSTLPPWLWPEV-VMCGDEASPARAETATDEPVRAGGSDAVDAPTPAVDDNVRTRGGGRKGGGCTDRTGAAAAEALLPEVCELCGKRYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPNCGRVFTSDRALDQHVSAKHSGDNVDIKPDWFVGSIYHLEPPXXXXVPTDGDMVVERGQDGGIPAANAAGSDQICRGTAEGAEATTTPKVVETPPEMLGVPAREVPATTVCTNIEGNSLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFCSGGRGAADRVAMA 592
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A507EV00_9FUNG (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EV00_9FUNG) HSP 1 Score: 115 bits (288), Expect = 1.190e-23 Identity = 133/457 (29.10%), Postives = 172/457 (37.64%), Query Frame = 1
Query: 31 QPCRILILGDGNFSFSLALAKALLLPP-----TP------HVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRS----LGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPG-GAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGG---SDAVNAPTPAVDDNVRKRGGDRKGGG-----------CTDRTGAEAADALLPE--VCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPK--KEERCPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKP 1299
+P ++LILGDGNFSFSLAL + L P TP HV S P + +I TSFD R +L KY E+ I+AAL S VTVLH ++A L + Q +F+ V++NHPH GTED R HR + HFF +VA+ +L P V V+L Q RW L QAAR G L F GY+ KR++ G SF+ T S + A G W E + D A A D+T A S+ + P A D+ + T T A +P VC CGK+ +A+ H H L Q+ G P K CPHP C + F +L QH KH D P
Sbjct: 12 EPFQVLILGDGNFSFSLALCRILWSRPSDLSITPQNVHVGHVYLSVPAT--SDRKIQITTTSFDDRQELNKKYPESKEILAALESERFAAEVTVLHGINAWELRDHFGD------------QNKFDAVVWNHPHLGTEDFRLHRFLMAHFFSSVAS-------------------------------------------VLKPKHSCVCVSLVEGQETRWDLVAQAARSGLGLTQVAAFDENLWPGYVVKRNKHGGSFKNTHTKQHTGS-------EMKSHLFRFALGEAEVIWRGLESTDIDVDLLPRVTATAADDDTFIADSTIASEGLTHPAGASADSRSNKSNPVSNLAFSESHTSLPLSLTKPTRKARLRASIPSDLVCPHCGKQLATARGWTQHVHMVHTL-QKFGTDWKPDRIKHLSCPHPSCSKSFADSESLWQHEINKHTTVTSDELP 403
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A7R9U7Z0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z0_9STRA) HSP 1 Score: 109 bits (273), Expect = 6.740e-23 Identity = 120/410 (29.27%), Postives = 160/410 (39.02%), Query Frame = 1
Query: 40 RILILGDGNFSFSLALAKALLLPPTPHVQPSSPQAR------LQQQTFE-------IVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATAL-DSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWL--WSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPDCG 1221
R+L+LG+GNFSF+ AL + L + ++P++R L+ +T E + ATSFD R ++ KY EA I+ L+ V V H VDA+ L L P F+ V+FN PH GTE+ + H FL H GVSD+ LA GGA+H+TLA Q ERW L A R F + + P E++ GY KRHQ G SFR+R + A T+ PWL W ET T +A+ AP A AL C CGK++ SAQA+++H R HELG P +E C DCG
Sbjct: 10 RVLLLGEGNFSFARALLR--LSAGGSALSSANPKSRKRCRAELRVETREPPSFPLLLTATSFDSREEVDRKYPEAAAILEELQRADVCVRHRVDASVLWTDAALRRLP------------FDIVVFNFPHLGTENAKLHSKFLAHVL---------------------SGVSDV----------------------LAVGGALHLTLAEGQAERWRLSATAERLFFEVAEQVPLRLERLPGYEQKRHQCGGSFRRRTAGAAVYILRRRAERY------------TVAPWLCGW----------------ETTTSTPAMPADHEAMVAP-------------------------ARQKAALFQ--CPECGKEFASAQAVKSHVRGVHELG-----PSRPAEEYTCS--DCG 300
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A067CII0_SAPPC (C2H2-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CII0_SAPPC) HSP 1 Score: 110 bits (275), Expect = 1.270e-22 Identity = 112/428 (26.17%), Postives = 164/428 (38.32%), Query Frame = 1
Query: 37 CRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRS----LGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKPDWF 1308
CR+L +GDG+ S+S + LL P + T ++ A++FD L L KY A + AL + + TVLH++DAT L + E +D F+ ++FNHPH+G ED+ RHR L HFFHA +L PGG V VTLA DQP+RW + ++A LV + + GY KRHQ+ +SF + + E L Q FG R G + ++P P+ ++ + + GK++ +AQ L+TH R HELG + ++ C GR F AL QH+ AKH G + I+PDW+
Sbjct: 3 CRVLTVGDGDLSYS----RCLLDPENWR------DLSIDAPTIDLTASTFDSLLALEDKYAMARSNIEALSAGSAAVTATVLHDIDATNLAA--FENDEADH---------FDRIVFNHPHSGVEDVHRHRRLLSHFFHAALR-------------------------------------------VLRPGGKVFVTLARDQPKRWEILKRA--DALDLVCCKHELWTEPRGYQRKRHQSDKSFHRILLHGEKLE----------QQSTIFGFGRR------------------------------RDGTAPLAHSPVPSA---------------------LPQSNGMACDDPACGGKRFATAQGLKTHLRMVHELGIKKRKRGKDADDDVCCAHCNGRQFQDAEALQQHMLAKH-GKDSRIRPDWY 302
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: K3WT47_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT47_GLOUD) HSP 1 Score: 108 bits (269), Expect = 2.580e-21 Identity = 91/272 (33.46%), Postives = 125/272 (45.96%), Query Frame = 1
Query: 34 PC---RILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDAT----ALDSRVLEVSPSDR--HRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHA---VANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHR-RPFPAEKIDG--YMTKRHQTGRSFR------QRVQASETL 786
PC R+L +GDGNFS+SLA AK L S A ++Q E+VATS+D +L+ KY E+ I + LR LG VLH VDAT +L + VLE D R+ Q+ F+ ++FNHPH G E+++RH+S L HFF + + N A + + H+TLA+ QPERW +A R +L R + G Y KRHQ G+SF ++VQ TL
Sbjct: 24 PCPTKRVLTVGDGNFSYSLAFAKRFL--------GVSSFASSKEQPIELVATSYDSYDELVEKYPESARICSQLRELGAQVLHRVDATNLAVSLANAVLESRDDDEASSRSVTTQKAFDLIVFNHPHCGEENVKRHQSLLSHFFSSALQILNHASNLQSEI------------------------------------------HLTLAVGQPERWEAVARAKRAELTLKQCVRDVDSHNDYGLVYERKRHQNGKSFHRVLLHGEKVQQESTL 245
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: W7TQ78_9STRA (C2h2 zinc finger protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ78_9STRA) HSP 1 Score: 107 bits (268), Expect = 3.150e-21 Identity = 123/404 (30.45%), Postives = 166/404 (41.09%), Query Frame = 1
Query: 31 QPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLG--VTVLHNVDA-----TALDSRVLEVSPSDRHRTQQHQ--------------QQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMT---KRHQTGRSFRQRVQASETLSFS------WAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCGKKYKSAQALRTHTRQFHE 1152
+P R+L+LGDGN S+SL LA+ L P A+L +ATSFD +L KY E+ V L +LG V V++ VDA T ++ E +D R H + F+HVIFNHPHTG ED+ RHR+ L HF + A + + AC + GT GG VHVTLA DQ +RW L + AAR GF L H F + + KRHQ+G+SFR R S T SF+ ++A+A AA+ P LW EA+ T+R G N GG + GA D + C+ C K ++ + LR H H+
Sbjct: 12 KPLRVLVLGDGNLSYSLGLAERL------------PGAQL-------LATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLES-AKAVL------------ACSTT------------------QGT-----EGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATAN-------AAYSFPPSPSLWRHAYDPEEHEAAM---------TIRPG--------------NKGVAGGSK---------GAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHD 321
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A0W8CDT8_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CDT8_PHYNI) HSP 1 Score: 106 bits (265), Expect = 4.950e-21 Identity = 83/253 (32.81%), Postives = 118/253 (46.64%), Query Frame = 1
Query: 25 ERQPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDG-------YMTKRHQTGRSFRQ 762
+RQ R+L +GDGNF++SLALAK H S+ ++ A+S+D +L++KY E I A L+ LG +VLH VDAT L ++ Q +F+ VIFNHPH G E++RRH+S L HF+ + + D+ +D IL +TLA QPERW E+A + G L HR+ +++D Y KRHQ G+SF Q
Sbjct: 31 KRQHRRVLTVGDGNFTYSLALAKQ-------HKNQSN------DTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASVLHRVDATNLRESLVAAGAE--------QLKFDAVIFNHPHCGEENVRRHQSLLSHFYASALDVIEDN-------------------------------EEDEESGIL-------LTLAEGQPERWQAVERALKAGLRL-HRQ---VDEVDNDEVFGLVYDRKRHQNGKSFHQ 220
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: M4B7T8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7T8_HYAAE) HSP 1 Score: 106 bits (264), Expect = 8.780e-21 Identity = 82/251 (32.67%), Postives = 112/251 (44.62%), Query Frame = 1
Query: 28 RQPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARL-QQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDG-------YMTKRHQTGRSF 756
RQP R+L++GDGNFS+SL+L K Q+R+ Q + ATS+D +L++KY E+ I A L LGVTVLH VDAT L ++ + QF VIFNHPH G E++RRH+S L HF+ + N + + D +G +L TLA Q ERW +A G L + + +D Y KRHQ G+SF
Sbjct: 35 RQP-RVLVVGDGNFSYSLSLIK-------------QHQSRVTDDQPIHLTATSYDSYEELIAKYPESKRICAQLGELGVTVLHRVDATNLRESLVAAGAKQK-------LQFSSVIFNHPHCGEENIRRHQSLLSHFYASALNVLEEK------------------------------EEDDASGILL--------TLAEGQSERWQAVPRALSGGLQLYRK----VDDVDNDETFGVVYERKRHQNGKSF 222
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A507DXG6_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DXG6_9FUNG) HSP 1 Score: 106 bits (265), Expect = 9.420e-21 Identity = 124/458 (27.07%), Postives = 176/458 (38.43%), Query Frame = 1
Query: 1 MGEPGDRPERQPCRILILGDGNFSFSLALA--------KALLLPPTPHVQ------PSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVA-----ALRSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLS--------FSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEV-----CELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEE--RCPHPDCGRVFTSDRALDQHVSAKH 1272
M EP + P + P R+LILGDGNFSFS AL +++ P HV P S + + +I TSFD R++L KY E ++ L+ LGV V H V+A L + +++F VI+NHPH GTED R HR + HFF +VA S + S D GS C V+L Q RW + QA R L F GY+ KR++ G SF+ T S F + + QG L V+ + D +++ + +T + S A P V V + + + A L + C C K+ SA+ H H L Q+ G + P ++ RC H CG++F +R L QH KH
Sbjct: 1 MPEPTNDP-KDPFRVLILGDGNFSFSAALCHILWPRATESIRTPANAHVAHAYLGLPFSATGK-NKSNVQITTTSFDDRIELFKKYPETRDVMEFLEGQRLKDLGVRVFHGVNAWQLHDHFGQ------------EEKFNAVIWNHPHLGTEDFRLHRFLMAHFFSSVA-SVLSS-----DKGSCVC-----------------------------------VSLVEGQETRWDIVAQATRSDLGLAQVAVFDETLWPGYVVKRNKHGGSFKNMHTKKHTGSEMKSHLFRFEFGSVKVQWQGLASTRRDKVLTAHAGQTVSAIVADSPASSDVARSMLDTAASAQSKVAFAQQPHV--LVLSKDSTPSSPAAIKPSRSNAKSRRLAAIPKDLKCPHCEKQLDSARGYTQHVHMVHIL-QKFGASWTPGRDRTTRCLHEGCGKIFRDERDLWQHGINKH 400
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: T0Q4M9_SAPDV (C2H2-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q4M9_SAPDV) HSP 1 Score: 104 bits (260), Expect = 1.140e-20 Identity = 119/432 (27.55%), Postives = 165/432 (38.19%), Query Frame = 1
Query: 37 CRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAAL----RSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCG-KKYKSAQALRTHTRQFHEL---GQEGGVAVAPKKEERCPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKPDWF 1308
CR+L +GDG+ S+S + LL P + T E+ A++FD L KY + AL ++ TVLH+VDAT L + E + F+ ++FNHPH+G ED+ RHR L HFFHA +L PGG V VTLA DQP+RW + ++A LV + + GY KRHQ+ +SF + + E L Q FG R+R G T T ++DA + CG K++ +AQ L+TH R HEL ++ G A A + RC H + GR F AL QH+ AKH G + I PDW+
Sbjct: 3 CRVLTVGDGDLSYS----RCLLDPENWR------DLDVDTPTIELTASTFDSLSALEDKYAMVRSNLDALGAGSAAVSATVLHDVDATNLAA--FENDEASH---------FDRIVFNHPHSGVEDVHRHRRLLSHFFHAALR-------------------------------------------VLRPGGKVFVTLARDQPKRWEILKRA--DALDLVCCKNELWTEPRGYQRKRHQSDKSFHRILLHGEKLE----------QQSTIFGFG---------------------------------------------------RRRDGTTPVATTTTPTTLPSSDAGVACDDPACGGKRFATAQGLKTHLRMVHELCIKKRKRGKADAD--DFRCSHCN-GREFQDAEALQQHLLAKH-GKDSRISPDWY 303 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1504.2937.1 >prot_E-siliculosus-1a_F_contig1504.2937.1 ID=prot_E-siliculosus-1a_F_contig1504.2937.1|Name=mRNA_E-siliculosus-1a_F_contig1504.2937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=594bp MGEPGDRPERQPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLback to top mRNA from alignment at E-siliculosus-1a_F_contig1504:20644..22425- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1504.2937.1 ID=mRNA_E-siliculosus-1a_F_contig1504.2937.1|Name=mRNA_E-siliculosus-1a_F_contig1504.2937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1782bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1504:20644..22425- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1504:20644..22425- >mRNA_E-siliculosus-1a_F_contig1504.2937.1 ID=mRNA_E-siliculosus-1a_F_contig1504.2937.1|Name=mRNA_E-siliculosus-1a_F_contig1504.2937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3564bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1504:20644..22425- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |