mRNA_E-siliculosus-1a_F_contig1504.2937.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1504.2937.1
Unique NamemRNA_E-siliculosus-1a_F_contig1504.2937.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: D7FVZ6_ECTSI (C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ6_ECTSI)

HSP 1 Score: 1083 bits (2800), Expect = 0.000e+0
Identity = 549/593 (92.58%), Postives = 563/593 (94.94%), Query Frame = 1
Query:    1 MGEPGDRPERQPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKPDWFVGSIYHLEPPXXXXXXADGDMVVERGQDGGIPAANAAGSDQRCRGTAEGAEATTTPTVIETPTEVLGVPEREVPATAVCTNIEGKSLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFCSGGRGAADRVAMA 1779
            MGEPGD P+RQPCRILILGDGNFSFSLALAKALLLPPTPH+ PSSPQARLQQQTFEIVATSFDGRLDLLSKY EAPGIVAALRS+GVTVLHNVDATALDSRVL+VSPSDR R QQ QQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSA+ S GPVG GGSGACGVSDIGGGGAVAAVPGMADRQ G GAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRR FPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAA+GDDGAAFGSTLPPWLW EV ++ GDEAS ARAETATDE VRAGGSDAV+APTPAVDDNVR RGG RKGGGCTDRTGA AA+ALLPEVCELCGK+YKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHP+CGRVFTSDRALDQHVSAKH GDNVDIKPDWFVGSIYHLEPPXXXX   DGDMVVERGQDGGIPAANAAGSDQ CRGTAEGAEATTTP V+ETP E+LGVP REVPAT VCTNIEG SLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFCSGGRGAADRVAMA
Sbjct:    1 MGEPGDGPKRQPCRILILGDGNFSFSLALAKALLLPPTPHLLPSSPQARLQQQTFEIVATSFDGRLDLLSKYAEAPGIVAALRSVGVTVLHNVDATALDSRVLQVSPSDRRRAQQQQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAIGSTGPVGGGGSGACGVSDIGGGGAVAAVPGMADRQGGKGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRRFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAARGDDGAAFGSTLPPWLWPEV-VMCGDEASPARAETATDEPVRAGGSDAVDAPTPAVDDNVRTRGGGRKGGGCTDRTGAAAAEALLPEVCELCGKRYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPNCGRVFTSDRALDQHVSAKHSGDNVDIKPDWFVGSIYHLEPPXXXXVPTDGDMVVERGQDGGIPAANAAGSDQICRGTAEGAEATTTPKVVETPPEMLGVPAREVPATTVCTNIEGNSLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFCSGGRGAADRVAMA 592          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A507EV00_9FUNG (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EV00_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 1.190e-23
Identity = 133/457 (29.10%), Postives = 172/457 (37.64%), Query Frame = 1
Query:   31 QPCRILILGDGNFSFSLALAKALLLPP-----TP------HVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRS----LGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPG-GAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGG---SDAVNAPTPAVDDNVRKRGGDRKGGG-----------CTDRTGAEAADALLPE--VCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPK--KEERCPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKP 1299
            +P ++LILGDGNFSFSLAL + L   P     TP      HV  S P      +  +I  TSFD R +L  KY E+  I+AAL S      VTVLH ++A  L     +            Q +F+ V++NHPH GTED R HR  + HFF +VA+                                           +L P    V V+L   Q  RW L  QAAR G  L     F      GY+ KR++ G SF+       T S       +        A G     W   E   +  D      A  A D+T  A     S+ +  P  A  D+   +                    T  T      A +P   VC  CGK+  +A+    H    H L Q+ G    P   K   CPHP C + F    +L QH   KH     D  P
Sbjct:   12 EPFQVLILGDGNFSFSLALCRILWSRPSDLSITPQNVHVGHVYLSVPAT--SDRKIQITTTSFDDRQELNKKYPESKEILAALESERFAAEVTVLHGINAWELRDHFGD------------QNKFDAVVWNHPHLGTEDFRLHRFLMAHFFSSVAS-------------------------------------------VLKPKHSCVCVSLVEGQETRWDLVAQAARSGLGLTQVAAFDENLWPGYVVKRNKHGGSFKNTHTKQHTGS-------EMKSHLFRFALGEAEVIWRGLESTDIDVDLLPRVTATAADDDTFIADSTIASEGLTHPAGASADSRSNKSNPVSNLAFSESHTSLPLSLTKPTRKARLRASIPSDLVCPHCGKQLATARGWTQHVHMVHTL-QKFGTDWKPDRIKHLSCPHPSCSKSFADSESLWQHEINKHTTVTSDELP 403          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A7R9U7Z0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z0_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.740e-23
Identity = 120/410 (29.27%), Postives = 160/410 (39.02%), Query Frame = 1
Query:   40 RILILGDGNFSFSLALAKALLLPPTPHVQPSSPQAR------LQQQTFE-------IVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATAL-DSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWL--WSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPDCG 1221
            R+L+LG+GNFSF+ AL +  L      +  ++P++R      L+ +T E       + ATSFD R ++  KY EA  I+  L+   V V H VDA+ L     L   P            F+ V+FN PH GTE+ + H  FL H                        GVSD+                      LA GGA+H+TLA  Q ERW L   A R  F +  + P   E++ GY  KRHQ G SFR+R   +        A               T+ PWL  W                ET T         +A+ AP                         A    AL    C  CGK++ SAQA+++H R  HELG        P +E  C   DCG
Sbjct:   10 RVLLLGEGNFSFARALLR--LSAGGSALSSANPKSRKRCRAELRVETREPPSFPLLLTATSFDSREEVDRKYPEAAAILEELQRADVCVRHRVDASVLWTDAALRRLP------------FDIVVFNFPHLGTENAKLHSKFLAHVL---------------------SGVSDV----------------------LAVGGALHLTLAEGQAERWRLSATAERLFFEVAEQVPLRLERLPGYEQKRHQCGGSFRRRTAGAAVYILRRRAERY------------TVAPWLCGW----------------ETTTSTPAMPADHEAMVAP-------------------------ARQKAALFQ--CPECGKEFASAQAVKSHVRGVHELG-----PSRPAEEYTCS--DCG 300          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A067CII0_SAPPC (C2H2-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CII0_SAPPC)

HSP 1 Score: 110 bits (275), Expect = 1.270e-22
Identity = 112/428 (26.17%), Postives = 164/428 (38.32%), Query Frame = 1
Query:   37 CRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRS----LGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKPDWF 1308
            CR+L +GDG+ S+S    + LL P             +   T ++ A++FD  L L  KY  A   + AL +    +  TVLH++DAT L +   E   +D          F+ ++FNHPH+G ED+ RHR  L HFFHA                                              +L PGG V VTLA DQP+RW + ++A      LV  +     +  GY  KRHQ+ +SF + +   E L           Q      FG                                R G +   ++P P+                         ++ +  +     GK++ +AQ L+TH R  HELG +         ++ C     GR F    AL QH+ AKH G +  I+PDW+
Sbjct:    3 CRVLTVGDGDLSYS----RCLLDPENWR------DLSIDAPTIDLTASTFDSLLALEDKYAMARSNIEALSAGSAAVTATVLHDIDATNLAA--FENDEADH---------FDRIVFNHPHSGVEDVHRHRRLLSHFFHAALR-------------------------------------------VLRPGGKVFVTLARDQPKRWEILKRA--DALDLVCCKHELWTEPRGYQRKRHQSDKSFHRILLHGEKLE----------QQSTIFGFGRR------------------------------RDGTAPLAHSPVPSA---------------------LPQSNGMACDDPACGGKRFATAQGLKTHLRMVHELGIKKRKRGKDADDDVCCAHCNGRQFQDAEALQQHMLAKH-GKDSRIRPDWY 302          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: K3WT47_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT47_GLOUD)

HSP 1 Score: 108 bits (269), Expect = 2.580e-21
Identity = 91/272 (33.46%), Postives = 125/272 (45.96%), Query Frame = 1
Query:   34 PC---RILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDAT----ALDSRVLEVSPSDR--HRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHA---VANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHR-RPFPAEKIDG--YMTKRHQTGRSFR------QRVQASETL 786
            PC   R+L +GDGNFS+SLA AK  L          S  A  ++Q  E+VATS+D   +L+ KY E+  I + LR LG  VLH VDAT    +L + VLE    D    R+   Q+ F+ ++FNHPH G E+++RH+S L HFF +   + N A +    +                                          H+TLA+ QPERW    +A R   +L    R   +    G  Y  KRHQ G+SF       ++VQ   TL
Sbjct:   24 PCPTKRVLTVGDGNFSYSLAFAKRFL--------GVSSFASSKEQPIELVATSYDSYDELVEKYPESARICSQLRELGAQVLHRVDATNLAVSLANAVLESRDDDEASSRSVTTQKAFDLIVFNHPHCGEENVKRHQSLLSHFFSSALQILNHASNLQSEI------------------------------------------HLTLAVGQPERWEAVARAKRAELTLKQCVRDVDSHNDYGLVYERKRHQNGKSFHRVLLHGEKVQQESTL 245          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: W7TQ78_9STRA (C2h2 zinc finger protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ78_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.150e-21
Identity = 123/404 (30.45%), Postives = 166/404 (41.09%), Query Frame = 1
Query:   31 QPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLG--VTVLHNVDA-----TALDSRVLEVSPSDRHRTQQHQ--------------QQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMT---KRHQTGRSFRQRVQASETLSFS------WAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCGKKYKSAQALRTHTRQFHE 1152
            +P R+L+LGDGN S+SL LA+ L            P A+L       +ATSFD   +L  KY E+   V  L +LG  V V++ VDA     T    ++ E   +D  R   H               + F+HVIFNHPHTG ED+ RHR+ L HF  + A + +            AC  +                   GT      GG VHVTLA DQ +RW L + AAR GF L H   F  +    +     KRHQ+G+SFR R   S T SF+      ++A+A        AA+     P LW         EA+          T+R G              N    GG +         GA   D +    C+ C K ++  + LR H    H+
Sbjct:   12 KPLRVLVLGDGNLSYSLGLAERL------------PGAQL-------LATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLES-AKAVL------------ACSTT------------------QGT-----EGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATAN-------AAYSFPPSPSLWRHAYDPEEHEAAM---------TIRPG--------------NKGVAGGSK---------GAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHD 321          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A0W8CDT8_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CDT8_PHYNI)

HSP 1 Score: 106 bits (265), Expect = 4.950e-21
Identity = 83/253 (32.81%), Postives = 118/253 (46.64%), Query Frame = 1
Query:   25 ERQPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDG-------YMTKRHQTGRSFRQ 762
            +RQ  R+L +GDGNF++SLALAK        H   S+          ++ A+S+D   +L++KY E   I A L+ LG +VLH VDAT L   ++             Q +F+ VIFNHPH G E++RRH+S L HF+ +  +   D+                                +D    IL       +TLA  QPERW   E+A + G  L HR+    +++D        Y  KRHQ G+SF Q
Sbjct:   31 KRQHRRVLTVGDGNFTYSLALAKQ-------HKNQSN------DTPLQLTASSYDSYDELVAKYPECKRICAQLKELGASVLHRVDATNLRESLVAAGAE--------QLKFDAVIFNHPHCGEENVRRHQSLLSHFYASALDVIEDN-------------------------------EEDEESGIL-------LTLAEGQPERWQAVERALKAGLRL-HRQ---VDEVDNDEVFGLVYDRKRHQNGKSFHQ 220          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: M4B7T8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7T8_HYAAE)

HSP 1 Score: 106 bits (264), Expect = 8.780e-21
Identity = 82/251 (32.67%), Postives = 112/251 (44.62%), Query Frame = 1
Query:   28 RQPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARL-QQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDG-------YMTKRHQTGRSF 756
            RQP R+L++GDGNFS+SL+L K               Q+R+   Q   + ATS+D   +L++KY E+  I A L  LGVTVLH VDAT L   ++      +        QF  VIFNHPH G E++RRH+S L HF+ +  N   +                               +  D +G +L        TLA  Q ERW    +A   G  L  +     + +D        Y  KRHQ G+SF
Sbjct:   35 RQP-RVLVVGDGNFSYSLSLIK-------------QHQSRVTDDQPIHLTATSYDSYEELIAKYPESKRICAQLGELGVTVLHRVDATNLRESLVAAGAKQK-------LQFSSVIFNHPHCGEENIRRHQSLLSHFYASALNVLEEK------------------------------EEDDASGILL--------TLAEGQSERWQAVPRALSGGLQLYRK----VDDVDNDETFGVVYERKRHQNGKSF 222          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: A0A507DXG6_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DXG6_9FUNG)

HSP 1 Score: 106 bits (265), Expect = 9.420e-21
Identity = 124/458 (27.07%), Postives = 176/458 (38.43%), Query Frame = 1
Query:    1 MGEPGDRPERQPCRILILGDGNFSFSLALA--------KALLLPPTPHVQ------PSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVA-----ALRSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLS--------FSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEV-----CELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEE--RCPHPDCGRVFTSDRALDQHVSAKH 1272
            M EP + P + P R+LILGDGNFSFS AL         +++  P   HV       P S   +  +   +I  TSFD R++L  KY E   ++       L+ LGV V H V+A  L     +            +++F  VI+NHPH GTED R HR  + HFF +VA S + S     D GS  C                                   V+L   Q  RW +  QA R    L     F      GY+ KR++ G SF+       T S        F + +     QG         L       V+ +  D  +++    +  +T  +  S    A  P V   V  +            + + A    L  +     C  C K+  SA+    H    H L Q+ G +  P ++   RC H  CG++F  +R L QH   KH
Sbjct:    1 MPEPTNDP-KDPFRVLILGDGNFSFSAALCHILWPRATESIRTPANAHVAHAYLGLPFSATGK-NKSNVQITTTSFDDRIELFKKYPETRDVMEFLEGQRLKDLGVRVFHGVNAWQLHDHFGQ------------EEKFNAVIWNHPHLGTEDFRLHRFLMAHFFSSVA-SVLSS-----DKGSCVC-----------------------------------VSLVEGQETRWDIVAQATRSDLGLAQVAVFDETLWPGYVVKRNKHGGSFKNMHTKKHTGSEMKSHLFRFEFGSVKVQWQGLASTRRDKVLTAHAGQTVSAIVADSPASSDVARSMLDTAASAQSKVAFAQQPHV--LVLSKDSTPSSPAAIKPSRSNAKSRRLAAIPKDLKCPHCEKQLDSARGYTQHVHMVHIL-QKFGASWTPGRDRTTRCLHEGCGKIFRDERDLWQHGINKH 400          
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Match: T0Q4M9_SAPDV (C2H2-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q4M9_SAPDV)

HSP 1 Score: 104 bits (260), Expect = 1.140e-20
Identity = 119/432 (27.55%), Postives = 165/432 (38.19%), Query Frame = 1
Query:   37 CRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARLQQQTFEIVATSFDGRLDLLSKYVEAPGIVAAL----RSLGVTVLHNVDATALDSRVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDEASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTGAEAADALLPEVCELCG-KKYKSAQALRTHTRQFHEL---GQEGGVAVAPKKEERCPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKPDWF 1308
            CR+L +GDG+ S+S    + LL P             +   T E+ A++FD    L  KY      + AL     ++  TVLH+VDAT L +   E   +           F+ ++FNHPH+G ED+ RHR  L HFFHA                                              +L PGG V VTLA DQP+RW + ++A      LV  +     +  GY  KRHQ+ +SF + +   E L           Q      FG                                                   R+R G       T  T   ++DA +      CG K++ +AQ L+TH R  HEL    ++ G A A   + RC H + GR F    AL QH+ AKH G +  I PDW+
Sbjct:    3 CRVLTVGDGDLSYS----RCLLDPENWR------DLDVDTPTIELTASTFDSLSALEDKYAMVRSNLDALGAGSAAVSATVLHDVDATNLAA--FENDEASH---------FDRIVFNHPHSGVEDVHRHRRLLSHFFHAALR-------------------------------------------VLRPGGKVFVTLARDQPKRWEILKRA--DALDLVCCKNELWTEPRGYQRKRHQSDKSFHRILLHGEKLE----------QQSTIFGFG---------------------------------------------------RRRDGTTPVATTTTPTTLPSSDAGVACDDPACGGKRFATAQGLKTHLRMVHELCIKKRKRGKADAD--DFRCSHCN-GREFQDAEALQQHLLAKH-GKDSRISPDWY 303          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1504.2937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ6_ECTSI0.000e+092.58C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=... [more]
A0A507EV00_9FUNG1.190e-2329.10Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A7R9U7Z0_9STRA6.740e-2329.27Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A067CII0_SAPPC1.270e-2226.17C2H2-type domain-containing protein n=1 Tax=Saprol... [more]
K3WT47_GLOUD2.580e-2133.46C2H2-type domain-containing protein n=1 Tax=Globis... [more]
W7TQ78_9STRA3.150e-2130.45C2h2 zinc finger protein n=1 Tax=Nannochloropsis g... [more]
A0A0W8CDT8_PHYNI4.950e-2132.81Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
M4B7T8_HYAAE8.780e-2132.67Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A507DXG6_9FUNG9.420e-2127.07Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
T0Q4M9_SAPDV1.140e-2027.55C2H2-type domain-containing protein n=1 Tax=Saprol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1504contigE-siliculosus-1a_F_contig1504:20644..22425 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1782
Model size1782
Exons1
Ec32 orthologEc-01_002750.1
Ec32 ortholog descriptionC2H2 zinc finger protein
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko03009
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC2.1.1.313
EggNOG OGsKOG4174@1,KOG4174@2759
EggNOG free text desc.rRNA (uridine-N3-)-methyltransferase activity
KEGG koko:K19307
Seed eggNOG ortholog2880.D7FVZ6
Seed ortholog evalue0.0
Seed ortholog score1085.1
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928015.5066514-CDS-E-siliculosus-1a_F_contig1504:20643..224251622928015.5066514-CDS-E-siliculosus-1a_F_contig1504:20643..22425Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1504 20644..22425 -
1696318773.3052857-CDS-E-siliculosus-1a_F_contig1504:20643..224251696318773.3052857-CDS-E-siliculosus-1a_F_contig1504:20643..22425Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1504 20644..22425 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1504.2937.1prot_E-siliculosus-1a_F_contig1504.2937.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1504 20644..22425 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1504.2937.1

>prot_E-siliculosus-1a_F_contig1504.2937.1 ID=prot_E-siliculosus-1a_F_contig1504.2937.1|Name=mRNA_E-siliculosus-1a_F_contig1504.2937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=594bp
MGEPGDRPERQPCRILILGDGNFSFSLALAKALLLPPTPHVQPSSPQARL
QQQTFEIVATSFDGRLDLLSKYVEAPGIVAALRSLGVTVLHNVDATALDS
RVLEVSPSDRHRTQQHQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVA
NSAMDSPGPVGDGGSGACGVSDIGGGGAVAAVPGMADRQDGTGAILAPGG
AVHVTLALDQPERWGLEEQAARHGFSLVHRRPFPAEKIDGYMTKRHQTGR
SFRQRVQASETLSFSWAASAQAAQGDDGAAFGSTLPPWLWSEVNMLSGDE
ASTARAETATDETVRAGGSDAVNAPTPAVDDNVRKRGGDRKGGGCTDRTG
AEAADALLPEVCELCGKKYKSAQALRTHTRQFHELGQEGGVAVAPKKEER
CPHPDCGRVFTSDRALDQHVSAKHRGDNVDIKPDWFVGSIYHLEPPPPPP
APADGDMVVERGQDGGIPAANAAGSDQRCRGTAEGAEATTTPTVIETPTE
VLGVPEREVPATAVCTNIEGKSLCQRCDVCGYWFTSPEDLQQHLDNLRPP
IEGAVTRYDCGTCVKDFGSRRALLQHAKFCSGGRGAADRVAMA*
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mRNA from alignment at E-siliculosus-1a_F_contig1504:20644..22425-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1504.2937.1 ID=mRNA_E-siliculosus-1a_F_contig1504.2937.1|Name=mRNA_E-siliculosus-1a_F_contig1504.2937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1782bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1504:20644..22425- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGAGAACCAGGAGACAGACCCGAACGTCAGCCTTGCCGCATCCTCAT CCTTGGCGACGGAAATTTTTCTTTCTCGCTGGCCCTCGCGAAGGCTCTAC TTCTTCCTCCAACACCCCACGTGCAGCCGTCGTCACCACAAGCACGGCTG CAGCAGCAAACCTTCGAAATCGTGGCCACGTCCTTCGACGGGCGTCTGGA CCTCCTGAGCAAGTATGTAGAGGCCCCCGGCATCGTCGCCGCCCTGCGCT CCCTGGGGGTGACGGTGCTTCACAATGTCGACGCGACGGCGCTAGACTCA AGAGTGCTGGAAGTCTCTCCCTCCGACAGACACCGCACGCAGCAGCACCA GCAGCAGTTCGAGCACGTTATTTTCAACCACCCGCACACCGGCACAGAGG ACATGCGCCGCCACCGGTCATTTCTGGGACACTTTTTTCACGCCGTGGCA AATTCTGCCATGGACAGCCCCGGTCCGGTCGGTGACGGTGGTAGTGGGGC TTGCGGCGTCAGCGATATCGGTGGTGGCGGCGCTGTTGCTGCGGTTCCAG GGATGGCAGATAGACAGGACGGCACGGGGGCGATCCTCGCCCCCGGCGGG GCCGTCCATGTTACCCTCGCTCTTGATCAGCCAGAACGCTGGGGCCTTGA GGAGCAGGCCGCCCGGCACGGCTTCTCCCTGGTTCACCGGCGACCGTTTC CGGCGGAGAAGATCGACGGTTACATGACCAAGCGGCACCAGACCGGCCGC TCGTTCCGGCAAAGGGTTCAAGCCAGCGAGACTCTGTCGTTCTCCTGGGC GGCGAGCGCGCAAGCCGCGCAGGGCGACGACGGGGCCGCGTTTGGCAGCA CTCTGCCCCCGTGGCTTTGGTCCGAAGTCAACATGTTGTCCGGCGACGAG GCGTCGACCGCGCGAGCAGAAACGGCCACCGACGAGACCGTTCGGGCTGG CGGTAGCGACGCCGTTAACGCACCAACGCCAGCGGTAGATGATAATGTGC GCAAGCGCGGCGGTGACCGCAAAGGGGGCGGTTGCACCGACAGGACAGGG GCGGAGGCAGCGGACGCCCTTCTCCCCGAGGTTTGCGAGCTGTGCGGCAA GAAGTACAAGTCGGCGCAGGCGCTGCGGACGCACACGCGGCAGTTCCACG AGCTGGGGCAGGAGGGGGGCGTCGCCGTGGCCCCGAAGAAAGAGGAGCGA TGCCCGCACCCGGACTGCGGCCGCGTGTTCACCAGCGACAGGGCGCTGGA CCAGCACGTGTCGGCCAAGCACCGCGGGGACAACGTCGACATCAAGCCGG ACTGGTTCGTGGGGAGCATTTATCACCTCGAGCCGCCGCCGCCCCCGCCG GCGCCAGCCGACGGGGACATGGTCGTAGAGAGAGGGCAAGACGGGGGGAT ACCCGCCGCAAATGCGGCTGGTTCTGACCAAAGATGTAGAGGCACCGCAG AGGGGGCGGAGGCTACGACGACGCCCACCGTTATAGAAACGCCAACAGAG GTGTTGGGGGTCCCGGAGAGGGAGGTTCCAGCGACTGCCGTTTGCACGAA TATCGAGGGTAAGAGTCTGTGCCAGCGGTGTGACGTGTGCGGGTACTGGT TCACCTCTCCGGAGGACCTGCAGCAGCACCTAGATAATCTGCGCCCACCG ATCGAGGGCGCGGTGACGCGGTACGATTGCGGCACGTGCGTGAAGGACTT CGGATCAAGGAGAGCGCTGCTTCAGCATGCCAAGTTTTGTTCCGGCGGTA GGGGTGCCGCAGACCGCGTTGCCATGGCGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1504:20644..22425-

>mRNA_E-siliculosus-1a_F_contig1504.2937.1 ID=mRNA_E-siliculosus-1a_F_contig1504.2937.1|Name=mRNA_E-siliculosus-1a_F_contig1504.2937.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3564bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1504:20644..22425- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGGAGAACCAGGAGACAGACCCGAACGTCAGCCTTGCCGCATCCTCAT
CCTTGGCGACGGAAATTTTTCTTTCTCGCTGGCCCTCGCGAAGGCTCTAC
TTCTTCCTCCAACACCCCACGTGCAGCCGTCGTCACCACAAGCACGGCTG
CAGCAGCAAACCTTCGAAATCGTGGCCACGTCCTTCGACGGGCGTCTGGA
CCTCCTGAGCAAGTATGTAGAGGCCCCCGGCATCGTCGCCGCCCTGCGCT
CCCTGGGGGTGACGGTGCTTCACAATGTCGACGCGACGGCGCTAGACTCA
AGAGTGCTGGAAGTCTCTCCCTCCGACAGACACCGCACGCAGCAGCACCA
GCAGCAGTTCGAGCACGTTATTTTCAACCACCCGCACACCGGCACAGAGG
ACATGCGCCGCCACCGGTCATTTCTGGGACACTTTTTTCACGCCGTGGCA
AATTCTGCCATGGACAGCCCCGGTCCGGTCGGTGACGGTGGTAGTGGGGC
TTGCGGCGTCAGCGATATCGGTGGTGGCGGCGCTGTTGCTGCGGTTCCAG
GGATGGCAGATAGACAGGACGGCACGGGGGCGATCCTCGCCCCCGGCGGG
GCCGTCCATGTTACCCTCGCTCTTGATCAGCCAGAACGCTGGGGCCTTGA
GGAGCAGGCCGCCCGGCACGGCTTCTCCCTGGTTCACCGGCGACCGTTTC
CGGCGGAGAAGATCGACGGTTACATGACCAAGCGGCACCAGACCGGCCGC
TCGTTCCGGCAAAGGGTTCAAGCCAGCGAGACTCTGTCGTTCTCCTGGGC
GGCGAGCGCGCAAGCCGCGCAGGGCGACGACGGGGCCGCGTTTGGCAGCA
CTCTGCCCCCGTGGCTTTGGTCCGAAGTCAACATGTTGTCCGGCGACGAG
GCGTCGACCGCGCGAGCAGAAACGGCCACCGACGAGACCGTTCGGGCTGG
CGGTAGCGACGCCGTTAACGCACCAACGCCAGCGGTAGATGATAATGTGC
GCAAGCGCGGCGGTGACCGCAAAGGGGGCGGTTGCACCGACAGGACAGGG
GCGGAGGCAGCGGACGCCCTTCTCCCCGAGGTTTGCGAGCTGTGCGGCAA
GAAGTACAAGTCGGCGCAGGCGCTGCGGACGCACACGCGGCAGTTCCACG
AGCTGGGGCAGGAGGGGGGCGTCGCCGTGGCCCCGAAGAAAGAGGAGCGA
TGCCCGCACCCGGACTGCGGCCGCGTGTTCACCAGCGACAGGGCGCTGGA
CCAGCACGTGTCGGCCAAGCACCGCGGGGACAACGTCGACATCAAGCCGG
ACTGGTTCGTGGGGAGCATTTATCACCTCGAGCCGCCGCCGCCCCCGCCG
GCGCCAGCCGACGGGGACATGGTCGTAGAGAGAGGGCAAGACGGGGGGAT
ACCCGCCGCAAATGCGGCTGGTTCTGACCAAAGATGTAGAGGCACCGCAG
AGGGGGCGGAGGCTACGACGACGCCCACCGTTATAGAAACGCCAACAGAG
GTGTTGGGGGTCCCGGAGAGGGAGGTTCCAGCGACTGCCGTTTGCACGAA
TATCGAGGGTAAGAGTCTGTGCCAGCGGTGTGACGTGTGCGGGTACTGGT
TCACCTCTCCGGAGGACCTGCAGCAGCACCTAGATAATCTGCGCCCACCG
ATCGAGGGCGCGGTGACGCGGTACGATTGCGGCACGTGCGTGAAGGACTT
CGGATCAAGGAGAGCGCTGCTTCAGCATGCCAAGTTTTGTTCCGGCGGTA
GGGGTGCCGCAGACCGCGTTGCCATGGCGTAGATGGGAGAACCAGGAGAC
AGACCCGAACGTCAGCCTTGCCGCATCCTCATCCTTGGCGACGGAAATTT
TTCTTTCTCGCTGGCCCTCGCGAAGGCTCTACTTCTTCCTCCAACACCCC
ACGTGCAGCCGTCGTCACCACAAGCACGGCTGCAGCAGCAAACCTTCGAA
ATCGTGGCCACGTCCTTCGACGGGCGTCTGGACCTCCTGAGCAAGTATGT
AGAGGCCCCCGGCATCGTCGCCGCCCTGCGCTCCCTGGGGGTGACGGTGC
TTCACAATGTCGACGCGACGGCGCTAGACTCAAGAGTGCTGGAAGTCTCT
CCCTCCGACAGACACCGCACGCAGCAGCACCAGCAGCAGTTCGAGCACGT
TATTTTCAACCACCCGCACACCGGCACAGAGGACATGCGCCGCCACCGGT
CATTTCTGGGACACTTTTTTCACGCCGTGGCAAATTCTGCCATGGACAGC
CCCGGTCCGGTCGGTGACGGTGGTAGTGGGGCTTGCGGCGTCAGCGATAT
CGGTGGTGGCGGCGCTGTTGCTGCGGTTCCAGGGATGGCAGATAGACAGG
ACGGCACGGGGGCGATCCTCGCCCCCGGCGGGGCCGTCCATGTTACCCTC
GCTCTTGATCAGCCAGAACGCTGGGGCCTTGAGGAGCAGGCCGCCCGGCA
CGGCTTCTCCCTGGTTCACCGGCGACCGTTTCCGGCGGAGAAGATCGACG
GTTACATGACCAAGCGGCACCAGACCGGCCGCTCGTTCCGGCAAAGGGTT
CAAGCCAGCGAGACTCTGTCGTTCTCCTGGGCGGCGAGCGCGCAAGCCGC
GCAGGGCGACGACGGGGCCGCGTTTGGCAGCACTCTGCCCCCGTGGCTTT
GGTCCGAAGTCAACATGTTGTCCGGCGACGAGGCGTCGACCGCGCGAGCA
GAAACGGCCACCGACGAGACCGTTCGGGCTGGCGGTAGCGACGCCGTTAA
CGCACCAACGCCAGCGGTAGATGATAATGTGCGCAAGCGCGGCGGTGACC
GCAAAGGGGGCGGTTGCACCGACAGGACAGGGGCGGAGGCAGCGGACGCC
CTTCTCCCCGAGGTTTGCGAGCTGTGCGGCAAGAAGTACAAGTCGGCGCA
GGCGCTGCGGACGCACACGCGGCAGTTCCACGAGCTGGGGCAGGAGGGGG
GCGTCGCCGTGGCCCCGAAGAAAGAGGAGCGATGCCCGCACCCGGACTGC
GGCCGCGTGTTCACCAGCGACAGGGCGCTGGACCAGCACGTGTCGGCCAA
GCACCGCGGGGACAACGTCGACATCAAGCCGGACTGGTTCGTGGGGAGCA
TTTATCACCTCGAGCCGCCGCCGCCCCCGCCGGCGCCAGCCGACGGGGAC
ATGGTCGTAGAGAGAGGGCAAGACGGGGGGATACCCGCCGCAAATGCGGC
TGGTTCTGACCAAAGATGTAGAGGCACCGCAGAGGGGGCGGAGGCTACGA
CGACGCCCACCGTTATAGAAACGCCAACAGAGGTGTTGGGGGTCCCGGAG
AGGGAGGTTCCAGCGACTGCCGTTTGCACGAATATCGAGGGTAAGAGTCT
GTGCCAGCGGTGTGACGTGTGCGGGTACTGGTTCACCTCTCCGGAGGACC
TGCAGCAGCACCTAGATAATCTGCGCCCACCGATCGAGGGCGCGGTGACG
CGGTACGATTGCGGCACGTGCGTGAAGGACTTCGGATCAAGGAGAGCGCT
GCTTCAGCATGCCAAGTTTTGTTCCGGCGGTAGGGGTGCCGCAGACCGCG
TTGCCATGGCGTAG
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